Metagenome / Metatranscriptome Family F095195

Basic Information
Family ID	F095195
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	71 residues
Representative Sequence	LRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRG
Number of Associated Samples	77
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.91 %
% of genes near scaffold ends (potentially truncated)	10.48 %
% of genes from short scaffolds (< 2000 bps)	4.76 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (89.524 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.952 % of family members)
Environment Ontology (ENVO)	Unclassified (48.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.238 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.43% β-sheet: 0.00% Coil/Unstructured: 17.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF14520	HHH_5	3.81
PF01927	Mut7-C	0.95
PF00571	CBS	0.95
PF13147	Obsolete Pfam Family	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.95

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
All Organisms	root	All Organisms	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
cellular organisms	root	All Organisms → cellular organisms	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.95 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.95 %
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Crenarchaeota archaeon 13_1_40CM_3_52_4	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_40CM_3_52_4	0.95 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.95 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10121974	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_40CM_3_52_4	740	Open in IMG/M
3300002912\|JGI25386J43895_10134321	All Organisms → cellular organisms → Archaea	613	Open in IMG/M
3300005552\|Ga0066701_10758782	All Organisms → cellular organisms → Archaea	580	Open in IMG/M
3300005559\|Ga0066700_10089562	All Organisms → cellular organisms → Archaea	1994	Open in IMG/M
3300009012\|Ga0066710_100306183	All Organisms → cellular organisms → Archaea	2330	Open in IMG/M
3300012189\|Ga0137388_10044961	All Organisms → cellular organisms → Archaea	3544	Open in IMG/M
3300012206\|Ga0137380_10160391	All Organisms → cellular organisms → Archaea	2051	Open in IMG/M
3300012349\|Ga0137387_10086796	All Organisms → cellular organisms → Archaea	2161	Open in IMG/M
3300026307\|Ga0209469_1006720	All Organisms → cellular organisms → Archaea	4634	Open in IMG/M
3300026314\|Ga0209268_1045925	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1413	Open in IMG/M
3300026537\|Ga0209157_1002918	All Organisms → cellular organisms → Archaea	13379	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.05%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.05%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.14%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Loam	Environmental → Terrestrial → Soil → Loam	0.95%
Sand	Environmental → Terrestrial → Soil → Sand	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	19.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021357	Freshwater microbial communities from subterranean cave lake in Wind Cave National Park, South Dakota, United States - WICALVC2017	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101219742	3300002558	Grasslands Soil	LRKLLIKLVAIETALVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIRLERAL
JGI25383J37093_101868512	3300002560	Grasslands Soil	MGSVSLRRLLIKLVAIETAMVGWLSYWIFLLYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVI
JGI25384J37096_100299501	3300002561	Grasslands Soil	MGCVYLRRLLIKLVAIETAMVGWLSYWIFLLYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAIT
JGI25384J37096_101679611	3300002561	Grasslands Soil	MGSVNLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAI
JGI25382J37095_100024711	3300002562	Grasslands Soil	MRKLLVKLVALETAILGWLTYWLFLIYANNPTVSEGLLNELSRFPQVSYTTIDISII
JGI25382J37095_101073902	3300002562	Grasslands Soil	MGSVNLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAIT
JGI25386J43895_101343211	3300002912	Grasslands Soil	VWNRLRKLLVKLVAIETAFVGWLSYWIFLVYANNPSIAAELFSGLQRFPQLSFSTVDIAVLVLIAILAVTLAFKFQRGLRPGIRLERALQMLE
JGI25389J43894_10686051	3300002916	Grasslands Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVMVII
Ga0066674_102731801	3300005166	Soil	LRKLLIKLVAIETALVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVI
Ga0066674_104896002	3300005166	Soil	VWNRLRKLLVKLVAIETAFVGWLSYWIFLVYANNPSIAAELSSGLQRFPQLSFSTVDIAVLVL
Ga0066689_103478942	3300005447	Soil	MRRLLIKMVAVETALVGWLSYWLFLVYADNPSVTQALADKLSKFPQFSFTTIDISVLVV
Ga0066701_107220652	3300005552	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIRLERALQM
Ga0066701_107587822	3300005552	Soil	LIKLVAIETALVGWLSYWVFLVYANNPSVSAGLIDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGIRLERALQMLENLMKR
Ga0066692_107431602	3300005555	Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLASSLQRFPQLSFSTIDIAVMVIIATLAITLAFKF
Ga0066700_100326934	3300005559	Soil	LRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGEQLTRFPQLAFTTVDIAVLVIFAAFAITLAFK
Ga0066700_100895623	3300005559	Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLSDQLTRFPQLAFTTVDIAVMV
Ga0066700_100920233	3300005559	Soil	MGSVSLRRLLIKLVAIETALVGWLSYWIFLLYANNPLVSAGLWDQLTRFPQLAFTTVDIAVMVIIAAFSITLAFKFHRG
Ga0066659_110194121	3300006797	Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPTVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAIT
Ga0066660_105440962	3300006800	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAI
Ga0099794_105948201	3300007265	Vadose Zone Soil	LRRLLIKLVAIETAMVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGI
Ga0066710_1003061833	3300009012	Grasslands Soil	LRRLLIKLVAIETAMVGWLSYWIFLLYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITL
Ga0066710_1021579021	3300009012	Grasslands Soil	MRRLLIKLVAIETMLVGWLSYWIFLVYANNPSASARLLDQLTSFPTLAFTTVDIAVLVIIASFAITLAFKFHRGLRPGIRLERA
Ga0099829_101584461	3300009038	Vadose Zone Soil	LRRLLIKLVALETALVGWLSYWIFLVYANNPTVSAGLVDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGIRLER
Ga0099829_109600581	3300009038	Vadose Zone Soil	MRRLLIKLVAIETAFVGWLSYWLFLVYADNPSVTQALADKLTKFPQFSFTTIDISVLVVIGVLSILLALKFQRGLRPGIRLE
Ga0099830_112922611	3300009088	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQ
Ga0099830_118092891	3300009088	Vadose Zone Soil	VGSVYLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLIDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHR
Ga0099828_105339442	3300009089	Vadose Zone Soil	LRRLLVKLVAIETAFVGWLAYWLFLVYANNPAVASELAGNLQRFPQLSFSTVDITILVIIAGLAIALAFKFQRGLRPGI
Ga0099828_106198592	3300009089	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPG
Ga0099827_106103502	3300009090	Vadose Zone Soil	LRRLLIKLVAIETAMVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHR
Ga0099827_117674581	3300009090	Vadose Zone Soil	MGSVNLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVD
Ga0134082_104075582	3300010303	Grasslands Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVMVIIASFAITLAFKFHRGLRPGIRLERALQMLEN
Ga0134080_106284801	3300010333	Grasslands Soil	VWNRLRKLLVKLVAIETAFVGWLSYWIFLVYANNPSIAAELSSGLQRFPQLSFSTVDIAVLVLI
Ga0134063_107327281	3300010335	Grasslands Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLATTL
Ga0134062_104950131	3300010337	Grasslands Soil	VWNRLRKLLVKLVAIETALVGWLSYWIFLVYANNPSIAAELFSGLQRFPQLSFSTVDIAVLGLIATLAVTLAFKFQRGLSP
Ga0126372_117879951	3300010360	Tropical Forest Soil	VAVETALVGWLAYWIFLVYANNPSVADQLSTSLQRFPQLSFSTVDIAVLVIIAALAVTLAYKFQRGL
Ga0126383_116617042	3300010398	Tropical Forest Soil	MRRLLVKLVAMETALVGWLGYWIFLLYSSNPLVSGGLASQLSRFPQVSFTTV
Ga0150983_137342262	3300011120	Forest Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFTTIDIAVMVIIATLAITLAF
Ga0137392_103384742	3300011269	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATIAITLAFKFQRGLRPGIRLER
Ga0137391_114609921	3300011270	Vadose Zone Soil	MGIPVSASVGSVYLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVIAGLSDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRP
Ga0137393_114299902	3300011271	Vadose Zone Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLFSSLERFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIR
Ga0137389_113201441	3300012096	Vadose Zone Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLFSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGI
Ga0137388_100449615	3300012189	Vadose Zone Soil	MRRLLVKLVALETALVGWLSYWLFLLYADNPTVAEGLAAQLSKFPQL
Ga0137388_111323492	3300012189	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITL
Ga0137364_105660872	3300012198	Vadose Zone Soil	LRKLLIKLVAIETAFVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIA
Ga0137383_105032132	3300012199	Vadose Zone Soil	MGSVYLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLIDQLTRFPQLAFTTVDIAVMLIIASFAIVLAF
Ga0137383_107377001	3300012199	Vadose Zone Soil	LIKLVAIETALVGWLSYWIFLVYANNPSVSAGLIDQLTRFPQLAFTTVDIAVMVIIAAFAITLA
Ga0137399_103270802	3300012203	Vadose Zone Soil	MRRLLIKLVAIETALVGWLSYWIFLLYANNPSVSAGLGESLTRFPQLAFTTVDIAVLVIIAAFAITLAFKFHRGLRPGIR
Ga0137399_104968221	3300012203	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGL
Ga0137380_101603911	3300012206	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLASSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIRLERALQML
Ga0137380_105965661	3300012206	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSIADQLSSSLQRFPTLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIR
Ga0137376_103175581	3300012208	Vadose Zone Soil	LRKLLIKLVAIETAFVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVI
Ga0137379_101426063	3300012209	Vadose Zone Soil	VAIETAMVGWLSYWLFLLYANNPSVAAELSSSLQRFPQLSFSTIDIAVMVIIAALAVTLAFKFHRGLRPGIR
Ga0137379_107149491	3300012209	Vadose Zone Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVMVIIATFAITLAFKFHRGLRPGIRLERAL
Ga0137379_108567242	3300012209	Vadose Zone Soil	VAIETALVGWLSYWLFLLYANNPPVAAELSSSLQRFPQLSFSTIDIAVMVIIAALAVTLAFKFQRGLRPGIRLERAL
Ga0137379_115779231	3300012209	Vadose Zone Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVMVIIATFAITLAFKFHRGLRPGIRLERALQ
Ga0137370_103175941	3300012285	Vadose Zone Soil	LRKLLIKLVAIETALVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIA
Ga0137387_100867963	3300012349	Vadose Zone Soil	MRRLLVKLVAIETALVGWLGYWIFLVYSNNPLVSGGLAAQLSRFPQVSFTTVD
Ga0137387_103609201	3300012349	Vadose Zone Soil	MVKLVAIETALVGWLGYWIFLVYSNNPTISGGLASQLTKFPQLSFTTVDITVLVLISA
Ga0137387_104505442	3300012349	Vadose Zone Soil	MGSVNLRRLLIKLVAIETAMVGWLSYWIFLVYANNPSVSAGLVDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGIRLER
Ga0137371_101136681	3300012356	Vadose Zone Soil	VWNRLRKLLVKLVAIETAFVGWLSYWIFLVYANNPSIAAELFSGLQRFPQLSFSTVDIAVLVLIAILAVTLAFKFQRGL
Ga0137385_101744231	3300012359	Vadose Zone Soil	MRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGDQLTRFPQLAFTTVDIAVLVIIASFAITLA
Ga0137385_113956811	3300012359	Vadose Zone Soil	VAIETAMVGWLSYWLFLLYANNPSVAAELSSSLQRFPQLSFSTIDIAVMVIIAALAVTLAFKFQRGLRPGIRLERALQM
Ga0137375_112233142	3300012360	Vadose Zone Soil	MRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGDQLTRFPQLAFTTVDIAVLVIIASFAITLAFKFYRGLRPGI
Ga0134055_10179102	3300012401	Grasslands Soil	MRRLLVKLVAIETALVGWLGYWIFLVYSNNPLVSGGLATQLSRFPQVSFTTVDIT
Ga0137373_108180412	3300012532	Vadose Zone Soil	LRKLLIKLVAIETAFVGWLSYWIFLVYANNPSVADQLAGSLQRFP
Ga0137396_101115991	3300012918	Vadose Zone Soil	MDIPVSARMGSVNLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLSDQLTRFPQLAFTTVDIAVMVIIAAFA
Ga0137396_112299791	3300012918	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAI
Ga0134077_100207671	3300012972	Grasslands Soil	MRRLLVKLVAIETALVGWLGYWIFLVYSNNPLVSGGLAAQLSRFPQVSFTTVDITVLVLIGSLSILLA
Ga0134076_101808742	3300012976	Grasslands Soil	MRRLLIKMVAVETALVGWLSYWLFLVYADNPSVTQALADKLSKFPQFSFTTIDISVLVVIGVLALLLALKFQRGLRPGIRLER
Ga0134089_100789352	3300015358	Grasslands Soil	MRRLLIKMVAVETALVGWLSYWLFLVYADNPSVTQALADKLSKFPQFSFTTIDISVLVVIGVLALLLALKFQRGLRPGIRL
Ga0066655_102086292	3300018431	Grasslands Soil	MLVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVLVIFAAFAITLAFKFHRGLRPGIRLERALQMLE
Ga0066667_109486341	3300018433	Grasslands Soil	MLVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVLVIFAAFAITLAFKFHR
Ga0066667_118311671	3300018433	Grasslands Soil	LRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVLVIFAAFAITLAFKFHR
Ga0066662_109071141	3300018468	Grasslands Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVMVIIASFAITL
Ga0066662_125317431	3300018468	Grasslands Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATL
Ga0215015_101101911	3300021046	Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPGVSAGLAEQLTRFPQLAFTTVDIAVMVII
Ga0213870_12081231	3300021357	Freshwater	LRRLLIRLVALETALMGWLGYWLFLVYANNPSISQGLAAQLGRFPQLSFTTVDISILVIIAGLSIFLAFKFQ
Ga0242660_10386543	3300022531	Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAIT
Ga0209520_105284001	3300025319	Soil	LRRLLIRLVALETALMGWLGYWLFLVYANNPSISQGLAAQLGRFPQLSFTTVDISILVIIAGLSIFLAFKFQRGLRPGIRLERALQM
Ga0209235_12241481	3300026296	Grasslands Soil	LRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGEQLTRFPQLAFTTVDIAVLVIFAAFAITLAF
Ga0209237_11390042	3300026297	Grasslands Soil	MRKLLVKLVALETAILGWLTYWLFLIYANNPTVSEGLLNELSRFPQVSYTTIDISIIVIIAVFAIAVA
Ga0209236_11567771	3300026298	Grasslands Soil	MGSVNLRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRG
Ga0209469_10067201	3300026307	Soil	LRKLLIKLVAIETALVGWLSYWIFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATLAI
Ga0209055_11421331	3300026309	Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLSDQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGIRLER
Ga0209055_11553642	3300026309	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGI
Ga0209761_10008781	3300026313	Grasslands Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRG
Ga0209761_11059551	3300026313	Grasslands Soil	MGCVYLRRLLIKLVAIETAMVGWLSYWIFLLYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRG
Ga0209268_10459251	3300026314	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIRLERALQ
Ga0209154_12169362	3300026317	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIATLA
Ga0209375_11529152	3300026329	Soil	LRRLLIKLVAIETMLVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVLVIFAAFAITLAFKFHRGLRPGIR
Ga0209377_10347121	3300026334	Soil	LRRLLIKLVAIETAMVGWLSYWIFLVYANNPSVSAGLWDQLTRFPQLAFTTVDIAVMVIIAAFA
Ga0257176_10800951	3300026361	Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFK
Ga0257179_10053592	3300026371	Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRP
Ga0209690_12867751	3300026524	Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVAEQLSNSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGI
Ga0209157_100291818	3300026537	Soil	MLVGWLSYWIFLVYANNPSVSAGLGEQLTKFPQLAFTTVDIAVLVIFAAFAITLAFKFHRGLRPGIRLERALQMLENLMKRN
Ga0209056_104714882	3300026538	Soil	LRRLLIKLVAIETAMVGWLSYWIFLLYANNPSVSAGLADQLTRFPQLAFTTVDIAVMVIIAAFAITLAFKFHRGLRPGIRLER
Ga0209156_100785141	3300026547	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVIIAILAITLAFKFQRG
Ga0209474_105692011	3300026550	Soil	LRRLLIKLVAIETAFVGWLSYWLFLVYANNPSVADQLAGSLQRFPQLSFSTIDIAVMVI
Ga0209588_10894721	3300027671	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLLYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLAITLAFKFQRGLRPGIRLE
Ga0209283_101554892	3300027875	Vadose Zone Soil	MRRLLVKLVALETALVGWLGYWLFLVYADNPAVAEGLAAQLSRFPQLAFTTVDISVLVS
Ga0209283_101918361	3300027875	Vadose Zone Soil	MRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLGEQLTRFPQLAFTTVDIAVMVIIATF
Ga0209590_108140842	3300027882	Vadose Zone Soil	LRRLLIKLVAIETALVGWLSYWLFLVYANNPSVADQLSSSLQRFPQLSFSTIDIAVMVIIATLA
Ga0209590_109836051	3300027882	Vadose Zone Soil	MRRLLVKLIAVETALVGWLGYWIFLVYSNNPLVSGGLASQLSRFPQVSFTTVDITVLVLIGSLSILLAFKFDRG
Ga0209853_10059316	3300027961	Groundwater Sand	LRRLLIRLVAVESMLVGWLAYWVFLVYANNPSISQGLAAQLGRFPQFSFTTVDISVLVVI
Ga0307471_1030974462	3300032180	Hardwood Forest Soil	LRRLLIKLVAIETALVGWLSYWIFLVYANNPSVSAGLVDQLTRFPQLSFTTVDIAVMVIIASFAIVL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095195

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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