Basic Information | |
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Family ID | F095241 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 62 residues |
Representative Sequence | MTQSTDEFRPETLVAIDAVKRALTIARRGVGAEHITAKGGRDLVTVTDVAVEDAVRGMV |
Number of Associated Samples | 97 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 83.84 % |
% of genes near scaffold ends (potentially truncated) | 83.81 % |
% of genes from short scaffolds (< 2000 bps) | 82.86 % |
Associated GOLD sequencing projects | 94 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.38 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (81.905 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.191 % of family members) |
Environment Ontology (ENVO) | Unclassified (38.095 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (43.810 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 44.83% β-sheet: 0.00% Coil/Unstructured: 55.17% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF02738 | MoCoBD_1 | 9.52 |
PF00459 | Inositol_P | 8.57 |
PF13458 | Peripla_BP_6 | 6.67 |
PF01402 | RHH_1 | 5.71 |
PF00528 | BPD_transp_1 | 5.71 |
PF03649 | UPF0014 | 3.81 |
PF00271 | Helicase_C | 1.90 |
PF05163 | DinB | 1.90 |
PF02518 | HATPase_c | 1.90 |
PF00120 | Gln-synt_C | 0.95 |
PF00496 | SBP_bac_5 | 0.95 |
PF00034 | Cytochrom_C | 0.95 |
PF03712 | Cu2_monoox_C | 0.95 |
PF00270 | DEAD | 0.95 |
PF00266 | Aminotran_5 | 0.95 |
PF01323 | DSBA | 0.95 |
PF00589 | Phage_integrase | 0.95 |
PF04978 | DUF664 | 0.95 |
PF10343 | Q_salvage | 0.95 |
PF03243 | MerB | 0.95 |
PF04909 | Amidohydro_2 | 0.95 |
PF00574 | CLP_protease | 0.95 |
PF14238 | DUF4340 | 0.95 |
PF13242 | Hydrolase_like | 0.95 |
PF13649 | Methyltransf_25 | 0.95 |
PF13539 | Peptidase_M15_4 | 0.95 |
PF00254 | FKBP_C | 0.95 |
PF01968 | Hydantoinase_A | 0.95 |
PF02653 | BPD_transp_2 | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG0390 | ABC-type iron transport system FetAB, permease component | Inorganic ion transport and metabolism [P] | 3.81 |
COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 1.90 |
COG0740 | ATP-dependent protease ClpP, protease subunit | Posttranslational modification, protein turnover, chaperones [O] | 1.90 |
COG2318 | Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB) | Secondary metabolites biosynthesis, transport and catabolism [Q] | 1.90 |
COG1030 | Membrane-bound serine protease NfeD, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 81.90 % |
Unclassified | root | N/A | 18.10 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000033|ICChiseqgaiiDRAFT_c2216612 | Not Available | 549 | Open in IMG/M |
3300004022|Ga0055432_10177787 | Not Available | 603 | Open in IMG/M |
3300004092|Ga0062389_103764010 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 569 | Open in IMG/M |
3300004114|Ga0062593_101557651 | All Organisms → cellular organisms → Bacteria | 715 | Open in IMG/M |
3300004157|Ga0062590_100849942 | All Organisms → cellular organisms → Bacteria | 847 | Open in IMG/M |
3300005176|Ga0066679_10513996 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 780 | Open in IMG/M |
3300005181|Ga0066678_10387600 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 925 | Open in IMG/M |
3300005353|Ga0070669_101216376 | All Organisms → cellular organisms → Bacteria | 651 | Open in IMG/M |
3300005406|Ga0070703_10166899 | Not Available | 840 | Open in IMG/M |
3300005446|Ga0066686_10565552 | All Organisms → cellular organisms → Bacteria | 772 | Open in IMG/M |
3300005451|Ga0066681_10216773 | All Organisms → cellular organisms → Bacteria | 1150 | Open in IMG/M |
3300005471|Ga0070698_100925622 | Not Available | 818 | Open in IMG/M |
3300005536|Ga0070697_100148589 | All Organisms → cellular organisms → Bacteria | 1974 | Open in IMG/M |
3300005545|Ga0070695_100753746 | All Organisms → cellular organisms → Bacteria | 777 | Open in IMG/M |
3300005549|Ga0070704_101259938 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 676 | Open in IMG/M |
3300005552|Ga0066701_10073484 | All Organisms → cellular organisms → Bacteria | 1943 | Open in IMG/M |
3300005615|Ga0070702_101811916 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei | 510 | Open in IMG/M |
3300005843|Ga0068860_100047353 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4098 | Open in IMG/M |
3300005843|Ga0068860_102504716 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300006794|Ga0066658_10318801 | All Organisms → cellular organisms → Bacteria | 830 | Open in IMG/M |
3300006871|Ga0075434_101051635 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 828 | Open in IMG/M |
3300006871|Ga0075434_102248359 | All Organisms → cellular organisms → Bacteria | 549 | Open in IMG/M |
3300006894|Ga0079215_10761978 | All Organisms → cellular organisms → Bacteria | 667 | Open in IMG/M |
3300007004|Ga0079218_12130829 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 648 | Open in IMG/M |
3300007076|Ga0075435_100950144 | All Organisms → cellular organisms → Bacteria | 750 | Open in IMG/M |
3300007255|Ga0099791_10355499 | Not Available | 702 | Open in IMG/M |
3300009156|Ga0111538_11974855 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 734 | Open in IMG/M |
3300009174|Ga0105241_10327169 | All Organisms → cellular organisms → Bacteria | 1323 | Open in IMG/M |
3300009177|Ga0105248_13240099 | All Organisms → cellular organisms → Bacteria | 518 | Open in IMG/M |
3300009553|Ga0105249_10323892 | All Organisms → cellular organisms → Bacteria | 1553 | Open in IMG/M |
3300010046|Ga0126384_10112650 | All Organisms → cellular organisms → Bacteria | 2031 | Open in IMG/M |
3300010046|Ga0126384_10425211 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1128 | Open in IMG/M |
3300010337|Ga0134062_10275127 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 790 | Open in IMG/M |
3300010397|Ga0134124_11484429 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 706 | Open in IMG/M |
3300010397|Ga0134124_11965430 | All Organisms → cellular organisms → Bacteria | 621 | Open in IMG/M |
3300011269|Ga0137392_10063113 | All Organisms → cellular organisms → Bacteria | 2827 | Open in IMG/M |
3300012174|Ga0137338_1009987 | All Organisms → cellular organisms → Bacteria | 1745 | Open in IMG/M |
3300012202|Ga0137363_11611078 | Not Available | 541 | Open in IMG/M |
3300012207|Ga0137381_10927288 | Not Available | 752 | Open in IMG/M |
3300012208|Ga0137376_10901148 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 759 | Open in IMG/M |
3300012209|Ga0137379_10711756 | Not Available | 910 | Open in IMG/M |
3300012355|Ga0137369_10482484 | Not Available | 879 | Open in IMG/M |
3300012362|Ga0137361_11880637 | All Organisms → cellular organisms → Bacteria | 516 | Open in IMG/M |
3300012671|Ga0137318_1032554 | All Organisms → cellular organisms → Bacteria | 542 | Open in IMG/M |
3300012918|Ga0137396_10095548 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. UW-LDO-01 | 2114 | Open in IMG/M |
3300012922|Ga0137394_10482616 | All Organisms → cellular organisms → Bacteria | 1053 | Open in IMG/M |
3300012929|Ga0137404_11936488 | All Organisms → cellular organisms → Bacteria | 549 | Open in IMG/M |
3300012930|Ga0137407_10054594 | All Organisms → cellular organisms → Bacteria | 3263 | Open in IMG/M |
3300012975|Ga0134110_10509776 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 548 | Open in IMG/M |
3300012976|Ga0134076_10004904 | All Organisms → cellular organisms → Bacteria | 4357 | Open in IMG/M |
3300013308|Ga0157375_12911176 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 572 | Open in IMG/M |
3300014157|Ga0134078_10391394 | All Organisms → cellular organisms → Bacteria | 621 | Open in IMG/M |
3300014325|Ga0163163_12361696 | All Organisms → cellular organisms → Bacteria | 590 | Open in IMG/M |
3300014884|Ga0180104_1163441 | Not Available | 661 | Open in IMG/M |
3300014968|Ga0157379_12221805 | All Organisms → cellular organisms → Bacteria | 545 | Open in IMG/M |
3300015200|Ga0173480_10633859 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 661 | Open in IMG/M |
3300015259|Ga0180085_1021174 | All Organisms → cellular organisms → Bacteria | 1807 | Open in IMG/M |
3300017656|Ga0134112_10047737 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1545 | Open in IMG/M |
3300017965|Ga0190266_10774566 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 611 | Open in IMG/M |
3300018052|Ga0184638_1221044 | All Organisms → cellular organisms → Bacteria | 662 | Open in IMG/M |
3300018053|Ga0184626_10160088 | All Organisms → cellular organisms → Bacteria | 957 | Open in IMG/M |
3300018063|Ga0184637_10392591 | Not Available | 828 | Open in IMG/M |
3300018076|Ga0184609_10581158 | Not Available | 504 | Open in IMG/M |
3300018082|Ga0184639_10214654 | All Organisms → cellular organisms → Bacteria | 1020 | Open in IMG/M |
3300018422|Ga0190265_10461908 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1377 | Open in IMG/M |
3300018481|Ga0190271_10263918 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium | 1763 | Open in IMG/M |
3300018482|Ga0066669_11513632 | All Organisms → cellular organisms → Bacteria | 610 | Open in IMG/M |
3300019881|Ga0193707_1007128 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3853 | Open in IMG/M |
3300019883|Ga0193725_1130430 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 562 | Open in IMG/M |
3300021051|Ga0206224_1005271 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1352 | Open in IMG/M |
3300021080|Ga0210382_10342057 | All Organisms → cellular organisms → Bacteria | 660 | Open in IMG/M |
3300021081|Ga0210379_10166238 | All Organisms → cellular organisms → Bacteria | 943 | Open in IMG/M |
3300022694|Ga0222623_10204691 | All Organisms → cellular organisms → Bacteria | 765 | Open in IMG/M |
3300025925|Ga0207650_10287498 | Not Available | 1340 | Open in IMG/M |
3300025961|Ga0207712_10241298 | All Organisms → cellular organisms → Bacteria | 1456 | Open in IMG/M |
3300025981|Ga0207640_10146922 | All Organisms → cellular organisms → Bacteria | 1726 | Open in IMG/M |
3300026089|Ga0207648_10940230 | All Organisms → cellular organisms → Bacteria | 808 | Open in IMG/M |
3300026296|Ga0209235_1121506 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1095 | Open in IMG/M |
3300026301|Ga0209238_1010927 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3554 | Open in IMG/M |
3300026340|Ga0257162_1017225 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 861 | Open in IMG/M |
3300026342|Ga0209057_1074317 | All Organisms → cellular organisms → Bacteria | 1465 | Open in IMG/M |
3300026351|Ga0257170_1004059 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1649 | Open in IMG/M |
3300026354|Ga0257180_1004005 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1519 | Open in IMG/M |
3300026360|Ga0257173_1002827 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1601 | Open in IMG/M |
3300026376|Ga0257167_1030381 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 802 | Open in IMG/M |
3300026499|Ga0257181_1000011 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae | 5901 | Open in IMG/M |
3300026530|Ga0209807_1294499 | All Organisms → cellular organisms → Bacteria | 549 | Open in IMG/M |
3300026536|Ga0209058_1049709 | All Organisms → cellular organisms → Bacteria | 2401 | Open in IMG/M |
3300026538|Ga0209056_10083497 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2682 | Open in IMG/M |
3300027846|Ga0209180_10059083 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2129 | Open in IMG/M |
3300027875|Ga0209283_10226330 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1242 | Open in IMG/M |
3300027961|Ga0209853_1176169 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 505 | Open in IMG/M |
3300028381|Ga0268264_12048799 | All Organisms → cellular organisms → Bacteria | 581 | Open in IMG/M |
3300028381|Ga0268264_12528003 | All Organisms → cellular organisms → Bacteria | 519 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10019212 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1760 | Open in IMG/M |
3300031720|Ga0307469_11079222 | All Organisms → cellular organisms → Bacteria | 753 | Open in IMG/M |
3300031949|Ga0214473_11695896 | All Organisms → cellular organisms → Bacteria | 629 | Open in IMG/M |
3300032401|Ga0315275_12739254 | All Organisms → cellular organisms → Bacteria | 506 | Open in IMG/M |
3300032770|Ga0335085_11141905 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 832 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 16.19% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 11.43% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.67% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.71% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.76% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 4.76% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.81% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.81% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.86% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.86% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.90% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.90% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.90% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.90% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.90% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.95% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.95% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.95% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.95% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.95% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 0.95% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.95% |
Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 0.95% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.95% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300004022 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010337 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015 | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012174 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2 | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012671 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT300_2 | Environmental | Open in IMG/M |
3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012975 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015 | Environmental | Open in IMG/M |
3300012976 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG | Environmental | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014157 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014884 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da | Environmental | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
3300015259 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D | Environmental | Open in IMG/M |
3300017656 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015 | Environmental | Open in IMG/M |
3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
3300018063 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2 | Environmental | Open in IMG/M |
3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300019883 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2 | Environmental | Open in IMG/M |
3300021051 | Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1 | Environmental | Open in IMG/M |
3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
3300021081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo | Environmental | Open in IMG/M |
3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026296 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026340 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A | Environmental | Open in IMG/M |
3300026342 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes) | Environmental | Open in IMG/M |
3300026351 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B | Environmental | Open in IMG/M |
3300026354 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B | Environmental | Open in IMG/M |
3300026360 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B | Environmental | Open in IMG/M |
3300026376 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B | Environmental | Open in IMG/M |
3300026446 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B | Environmental | Open in IMG/M |
3300026499 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B | Environmental | Open in IMG/M |
3300026530 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes) | Environmental | Open in IMG/M |
3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027875 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027961 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031949 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197 | Environmental | Open in IMG/M |
3300032401 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
ICChiseqgaiiDRAFT_22166121 | 3300000033 | Soil | VAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR* |
Ga0055432_101777872 | 3300004022 | Natural And Restored Wetlands | MTESADQFRPETLVAIEAVERALSITRRGVGAENVSEKGHRDLVTVTDVAVEDAVRSILA |
Ga0062389_1037640102 | 3300004092 | Bog Forest Soil | MMLSPDEFRPETLLAIDTVESALVIARCGIGAQHIAAKGERDLVTATDLAI |
Ga0062593_1015576512 | 3300004114 | Soil | MTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR* |
Ga0062590_1008499422 | 3300004157 | Soil | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR* |
Ga0066679_105139961 | 3300005176 | Soil | MTWSADEFRPVSLVAIGAVEQALDLARRRVGAADITAKDGRDLVTATDVAVED |
Ga0066678_103876001 | 3300005181 | Soil | MTQSTDQFRLETLVLIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAV |
Ga0070669_1012163762 | 3300005353 | Switchgrass Rhizosphere | MTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR* |
Ga0070703_101668992 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSFAEGFRRETVVAMGAVERALELARGGVGAKEITSKGARDVVTATDVAVEDAVRGIVHDAL |
Ga0066686_105655521 | 3300005446 | Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEAL |
Ga0066681_102167732 | 3300005451 | Soil | MTRPTDGFRPETLVAIDAVERALELARHRVGAGDITAKDGRDLVTATDVAVEDAVRGIVR |
Ga0070698_1009256223 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MTESGDPFRPETLVAIEAVMRALTIAQRGVGADEVTAKSGRDLVTAADVAIEDAVRRMVADALSFSVIGEE |
Ga0070698_1014056802 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MRQSAGEFRPETLVAVEAVNQALRIARRGVESQAITVKDGRDLVTVRDVA |
Ga0070697_1001485893 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSSGAGFRSVTLVAIGAAERGLELARRRVGAADITAKEGRDLVTATDVAVE |
Ga0070695_1007537462 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDA |
Ga0070704_1012599382 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLRDSELCSGNPAVLREPGARGG* |
Ga0066701_100734843 | 3300005552 | Soil | MTDPAAQFRPETLVANEAVTRALTIAQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDALAFSVIGEERG |
Ga0066695_103273552 | 3300005553 | Soil | MTRLFRRETQVAVDTVTQALDLARRRVGADEIASKGGRDLVTATD |
Ga0070702_1018119161 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | STDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR* |
Ga0068860_1000473534 | 3300005843 | Switchgrass Rhizosphere | MTQSTDEFRRETRVAIDAVKRSLSIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR* |
Ga0068860_1025047162 | 3300005843 | Switchgrass Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVAVEDAV |
Ga0066658_103188011 | 3300006794 | Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRLERNAEG |
Ga0075434_1010516352 | 3300006871 | Populus Rhizosphere | MTRTTDGFRPETLVAIDAVERALELARHRVGAADITAKDGRDLVTATDVAVEDA |
Ga0075434_1022483592 | 3300006871 | Populus Rhizosphere | MTDPAAQFRPETLVAIEAVSRALTIAQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDA |
Ga0079215_107619781 | 3300006894 | Agricultural Soil | MTQAADRFRPEALVAIDAVRRALAIARRGIGARDITGKGGRDLVTATDVAVEDAVRGTVSDALGFPVVGEERG |
Ga0079218_121308292 | 3300007004 | Agricultural Soil | MTQSTDEFRPETLVAIDAVKRALTIARRGVGAEHITAKGGRDLVTVTDVAVEDAVRGMV |
Ga0075435_1009501443 | 3300007076 | Populus Rhizosphere | MSALRAETLRAIDAVARALDLAERRTGSSDVTSKGGRDVVTATDVLVEEALR |
Ga0099791_103554991 | 3300007255 | Vadose Zone Soil | MTSAFRPKTLVAVDAVGWALELARRRAGAEEITSKGARDVV |
Ga0099829_108792311 | 3300009038 | Vadose Zone Soil | MTRSADEFRPVTRVAIDAVEQALELAQGRVGAADITAK |
Ga0111538_119748552 | 3300009156 | Populus Rhizosphere | VSAGPFRRETLVAVDAVQRGLAIAGRGVGAEAVASKGGRDIVTAADVAVEDAVR |
Ga0105241_103271693 | 3300009174 | Corn Rhizosphere | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALQPMRWASR* |
Ga0105248_132400991 | 3300009177 | Switchgrass Rhizosphere | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVRGIAADALGFSVIG |
Ga0105249_103238922 | 3300009553 | Switchgrass Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGEASVSRSGA |
Ga0126384_101126501 | 3300010046 | Tropical Forest Soil | VGPRVVDFRPETLVAIDTVERALALARQGGGAGKITSKGGRDIVTAADVAV |
Ga0126384_104252111 | 3300010046 | Tropical Forest Soil | MTSSFREVRPETGVAIGAVEQALEIARRRVGAADITAKEGRDLVTATDVAVEDAVRTIVR |
Ga0134062_102751271 | 3300010337 | Grasslands Soil | VTESGRPFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRNMVADAL |
Ga0134124_114844292 | 3300010397 | Terrestrial Soil | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR* |
Ga0134124_119654301 | 3300010397 | Terrestrial Soil | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALED |
Ga0137392_100631131 | 3300011269 | Vadose Zone Soil | MTSSAAELRPVTLVAIGAVERALELARRRVGPADITAKEGRDLVTAT |
Ga0137338_10099871 | 3300012174 | Soil | MPQSADEFRPETLVAVDAVKRALTIARRSGESEAITVKDGRDLVTARDVAVEDAIRGMVADALGFSVVG |
Ga0137363_116110781 | 3300012202 | Vadose Zone Soil | MTEFTRPFRPETVVAIEAVRRALTIALRDVGGREVTTKGGRDLVTAADVAVENAVRSMMADALSFPVVGEER |
Ga0137381_109272881 | 3300012207 | Vadose Zone Soil | MTSFAEGFRRETVVAMGAVERALELARRGVGAKDISSKGARDVVTATDVAVEDAVRGI |
Ga0137376_109011482 | 3300012208 | Vadose Zone Soil | MTDPAAQFRPETLVAIEAVKRSLTIVQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDALGFSVIGEERGGEAADD |
Ga0137379_107117562 | 3300012209 | Vadose Zone Soil | MTGAFRSETLVAVDAVRQALELARRRVGAEEITSKGGRDVVTATDVAV |
Ga0137369_104824842 | 3300012355 | Vadose Zone Soil | MTGAFRSETLVAVDAVRQALELARRRVGAEEITSKGGRDVVTATDVAVEDAVR |
Ga0137361_118806371 | 3300012362 | Vadose Zone Soil | MTRPTDGFRPETLVAIDAVERALELARHRVGAADITAKDGRDLVTATDVAVEDAIRGIV |
Ga0137318_10325541 | 3300012671 | Soil | MTGSADFRPETLVALDAVTRALTIARRGVGAADVTEKDGRDIVTVADFAVE |
Ga0137396_100955481 | 3300012918 | Vadose Zone Soil | VAFGAMTESGRQFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVAD |
Ga0137394_104826162 | 3300012922 | Vadose Zone Soil | MALRARKGNQFRSETLVAIDAVKHALTIARRGVNAEDVAEKDGRDIVTVADIAVEDAVRSIVAGALDFPVVGEERGG |
Ga0137404_119364881 | 3300012929 | Vadose Zone Soil | MTQSTDGFRAETFVAIDAVKRAITTARRGVGTRDITAKGERDLVTATDVAVEDAVRGTMADVLGFSV |
Ga0137407_100545944 | 3300012930 | Vadose Zone Soil | LTLSTDEFRPETLVAIDAVKRALTIARQGVGAADSTAKGGRDLVTATDLAVEDAVRGI |
Ga0134110_105097763 | 3300012975 | Grasslands Soil | MTQSADEFRPETRVAIDAVKHALTIARRGVGTEDITHKGGRDLVTVTDIAVEDAVRRIVAET |
Ga0134076_100049045 | 3300012976 | Grasslands Soil | VTESGRPFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVADALSFSVVGEERGGKASA |
Ga0157375_129111762 | 3300013308 | Miscanthus Rhizosphere | AMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR* |
Ga0134078_103913942 | 3300014157 | Grasslands Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAA |
Ga0163163_123616962 | 3300014325 | Switchgrass Rhizosphere | MTLSADELRPETLVAIDAVKRGLAIARRGLGADDITAKGGRDLVTVADVAVEDAVRGIV |
Ga0180104_11634413 | 3300014884 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESEDITVKDGRDLVTVSDVAVEDAIRGMVAYALGFSVVGEERGGEAAA |
Ga0157379_122218051 | 3300014968 | Switchgrass Rhizosphere | MTLSADELRPETLVAIDAVKRGLAIARCGLGADDITAKGGRDLVTVADVAVEDAVRGIVADALGVSV |
Ga0173480_106338592 | 3300015200 | Soil | MTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALQPMRWASR* |
Ga0180085_10211741 | 3300015259 | Soil | MPQSADELRPETLVAVDAVKRALTIARRSGESEAITVKDGRDLVTARDVAVEDAIRGMVADALGFSVVGEERGGEA |
Ga0134112_100477373 | 3300017656 | Grasslands Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRLERNAEGA |
Ga0190266_107745662 | 3300017965 | Soil | MDRATEDIRPATRVAIFAVRRGLELARGRVGAEEITSKGGRDLVTATDIAVEDEIRRIVE |
Ga0184638_12210441 | 3300018052 | Groundwater Sediment | MNPAIEDIRPATRVAIRAVRRGLELARGRVGADVITSKGGRDLVTATDIAVED |
Ga0184626_101600881 | 3300018053 | Groundwater Sediment | MLTESADQLRPETLVALEAVKRALTIARRGVGAADVTNKDGRDIVTVADIAVEDAVRSIV |
Ga0184637_103925911 | 3300018063 | Groundwater Sediment | MRKGPTATDGFRPETLKAVEVVERALGLTRRDVVAGDIASKGGRDVVTATDVAVEDAVRE |
Ga0184609_105811582 | 3300018076 | Groundwater Sediment | MPQSVDEFRPETLVAVDAVKRALTIARRSVESEDITVKDGRDLVTERDVAVEDAIRGMVADALGFSVV |
Ga0184639_102146542 | 3300018082 | Groundwater Sediment | MLTESADFRPETLVALEAVKRALTIARRGVAAADVTNKDGRDIVTVADIAVE |
Ga0190265_104619081 | 3300018422 | Soil | MTEPAEPFRTETLVGIEAVERALTIARRGVGAADIREKGQRDLVTVADIAVEDAVRGILTEAIRLP |
Ga0190271_102639185 | 3300018481 | Soil | MDRAIEDVRPATRVALRAVRRGLELARSRVGAGEITSKGGRDLVTATDIAVE |
Ga0066669_115136322 | 3300018482 | Grasslands Soil | MTRPTDQFRPETLVAIDAVKRALAIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAAL |
Ga0193707_10071284 | 3300019881 | Soil | MPQSAGEFRPETLVAVKAVNQALRVARRSVESQGITVKDGRDLVTVRDVAVEDAIRGMVVDALGFPVV |
Ga0193725_11304302 | 3300019883 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESEDITVKDGRDLVTVRDVAV |
Ga0206224_10052712 | 3300021051 | Deep Subsurface Sediment | MPQSADEFRPETLVAVDAVKRALTIARRSVESEDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGEERG |
Ga0210382_103420571 | 3300021080 | Groundwater Sediment | MHVAGTRPETLVAIDAVERGLELARSRVGAGDVTSKGGRDLVTATDI |
Ga0210379_101662381 | 3300021081 | Groundwater Sediment | MTGSADFRPETLVALEAVKRALTIARRGVDADDVTAKDGRDIVTVADIAVEDA |
Ga0222623_102046911 | 3300022694 | Groundwater Sediment | MLTESADQLRPETLVALEAVKRALTIARRGVGAADVTAKDGRDIVTVADIAVEDAVRGIVADALGFPVVG |
Ga0207650_102874982 | 3300025925 | Switchgrass Rhizosphere | VSAGPFRPETLVAVDAVQRGLAIAGRGVGAEAVASKGGRDIVTVADVAVEDAVRG |
Ga0207712_102412982 | 3300025961 | Switchgrass Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLR |
Ga0207640_101469221 | 3300025981 | Corn Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLRDS |
Ga0207648_109402302 | 3300026089 | Miscanthus Rhizosphere | MTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR |
Ga0209235_11215063 | 3300026296 | Grasslands Soil | MTESGRPFRPETVVAIEAVNRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVADA |
Ga0209238_10109271 | 3300026301 | Grasslands Soil | VATDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALGT |
Ga0257162_10172251 | 3300026340 | Soil | MTSSAAELRPVTLVAIGAVERALELARRRVGAADITAKEGRDLVTATDVAV |
Ga0209057_10743171 | 3300026342 | Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPG |
Ga0257170_10040591 | 3300026351 | Soil | MPQSADEFRPETLVAVNAVKRALTIARGSVESGDITVKDGRDLVTVRDVAVEDAI |
Ga0257180_10040052 | 3300026354 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRG |
Ga0257173_10028271 | 3300026360 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGEERGGEA |
Ga0257167_10303811 | 3300026376 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGE |
Ga0257178_10317122 | 3300026446 | Soil | MTSSGAGFRSVTLVAIGAAERGLELARRRVGAADITAKEG |
Ga0257181_10000111 | 3300026499 | Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGF |
Ga0209807_12944992 | 3300026530 | Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITTKGGRDLVTVTDVAIEDAVRGIVAEALGTECAPSDH |
Ga0209058_10497095 | 3300026536 | Soil | MTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRL |
Ga0209056_100834974 | 3300026538 | Soil | MTDPAAQFRPETLVAIEAVTRALTIAQPGVSSEDITAKGGRDLVTVVDVAVE |
Ga0209180_100590833 | 3300027846 | Vadose Zone Soil | MTRSAEFRPETLVAIDAVERALELARRRVGAADITAKDGRDLVTATDVAVEDAVR |
Ga0209180_105865681 | 3300027846 | Vadose Zone Soil | MTSSAAELRPVTLVAIGAVERALELARRRVGAADITAKEGRDLVTAT |
Ga0209283_102263302 | 3300027875 | Vadose Zone Soil | MPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDA |
Ga0209283_108213632 | 3300027875 | Vadose Zone Soil | MMRSADEFRPVTLVAIGAVEQALELARRRVGAADITAKGGRDLVTAT |
Ga0209853_11761691 | 3300027961 | Groundwater Sand | LTESTDEFRPETLVAIEAVKRAFTIARRGIAAEDVTAKGARDLVTATDVAVEDAVRGVVADAL |
Ga0268264_120487992 | 3300028381 | Switchgrass Rhizosphere | MTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAA |
Ga0268264_125280031 | 3300028381 | Switchgrass Rhizosphere | MTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR |
(restricted) Ga0255310_100192121 | 3300031197 | Sandy Soil | MTRSDEFRSQTLVAIDAVERALELARRRVGAADITAKGGRDLVTATDVAVEDAVRAI |
Ga0307469_110792221 | 3300031720 | Hardwood Forest Soil | MTPSTDEFRPETLVAIDAVKRGLAIARRRIGAEDVTSKGGRDLVTVTDVAVEDAVRGAVADALGFSVIGEE |
Ga0214473_116958961 | 3300031949 | Soil | MTGSADFRPETLVALDAVTRALAIARRGVGAEDVTAKDGRDIVTVADFAVEDAVRSSVADALGF |
Ga0315275_127392542 | 3300032401 | Sediment | MTQSTDGFRPETLVAIDAVERALDVARRRVGAEDITSKDARDVVTATDVAVEDAVR |
Ga0335085_111419052 | 3300032770 | Soil | VGDEPAVPPTHEFRSETVAASEAVERGLDLARSRAGAADITTKGDRDLVTATDVAVED |
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