Metagenome Family F095260

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095260
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	51 residues
Representative Sequence	VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA
Number of Associated Samples	68
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.38 %
% of genes near scaffold ends (potentially truncated)	95.24 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.238 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.191 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.952 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.36% β-sheet: 2.56% Coil/Unstructured: 73.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12849	PBP_like_2	3.81
PF00196	GerE	1.90
PF04519	Bactofilin	1.90
PF13545	HTH_Crp_2	0.95
PF00027	cNMP_binding	0.95
PF08007	JmjC_2	0.95
PF01381	HTH_3	0.95
PF04773	FecR	0.95
PF01068	DNA_ligase_A_M	0.95
PF14023	DUF4239	0.95
PF13378	MR_MLE_C	0.95
PF01717	Meth_synt_2	0.95
PF07859	Abhydrolase_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.90
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.95
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.95
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
All Organisms	root	All Organisms	24.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
cellular organisms	root	All Organisms → cellular organisms	24.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.95 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.95 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.95 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.95 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.95 %
Alsobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → Alsobacter soli	0.95 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.95 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.24 %
Bradyrhizobium sp. WD16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.95 %
Alsobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → Alsobacter soli	0.95 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.95 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100118434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3163	Open in IMG/M
3300005332\|Ga0066388_100806098	Not Available	1531	Open in IMG/M
3300005332\|Ga0066388_102368450	Not Available	962	Open in IMG/M
3300005332\|Ga0066388_105624959	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005332\|Ga0066388_105657564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	632	Open in IMG/M
3300005764\|Ga0066903_101040902	Not Available	1502	Open in IMG/M
3300005764\|Ga0066903_103088650	Not Available	901	Open in IMG/M
3300005764\|Ga0066903_106532369	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_106879712	Not Available	590	Open in IMG/M
3300005764\|Ga0066903_108655420	Not Available	518	Open in IMG/M
3300006057\|Ga0075026_100541994	Not Available	676	Open in IMG/M
3300006791\|Ga0066653_10535255	Not Available	593	Open in IMG/M
3300006800\|Ga0066660_10957785	Not Available	692	Open in IMG/M
3300010048\|Ga0126373_10649247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1111	Open in IMG/M
3300010048\|Ga0126373_10667446	Not Available	1096	Open in IMG/M
3300010048\|Ga0126373_11331198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → Alsobacter soli	784	Open in IMG/M
3300010359\|Ga0126376_12487280	Not Available	565	Open in IMG/M
3300010361\|Ga0126378_10992998	Not Available	943	Open in IMG/M
3300010361\|Ga0126378_11963267	Not Available	667	Open in IMG/M
3300010376\|Ga0126381_103746333	Not Available	594	Open in IMG/M
3300010863\|Ga0124850_1042464	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300012208\|Ga0137376_10621273	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300012971\|Ga0126369_10830921	Not Available	1007	Open in IMG/M
3300016270\|Ga0182036_10753887	Not Available	790	Open in IMG/M
3300016294\|Ga0182041_11788004	Not Available	570	Open in IMG/M
3300016341\|Ga0182035_10186300	Not Available	1630	Open in IMG/M
3300016341\|Ga0182035_10973183	Not Available	751	Open in IMG/M
3300016341\|Ga0182035_11517505	Not Available	603	Open in IMG/M
3300016341\|Ga0182035_12029064	Not Available	523	Open in IMG/M
3300016357\|Ga0182032_10783341	Not Available	805	Open in IMG/M
3300016357\|Ga0182032_10822737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300016357\|Ga0182032_11629249	Not Available	562	Open in IMG/M
3300016357\|Ga0182032_11669802	Not Available	555	Open in IMG/M
3300016371\|Ga0182034_10948806	Not Available	741	Open in IMG/M
3300016371\|Ga0182034_11200176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300016387\|Ga0182040_10401346	Not Available	1076	Open in IMG/M
3300016387\|Ga0182040_10492834	Not Available	978	Open in IMG/M
3300016404\|Ga0182037_10103568	Not Available	2055	Open in IMG/M
3300016422\|Ga0182039_10932923	Not Available	776	Open in IMG/M
3300016422\|Ga0182039_11956111	Not Available	539	Open in IMG/M
3300016445\|Ga0182038_11739950	Not Available	562	Open in IMG/M
3300017955\|Ga0187817_10953144	Not Available	549	Open in IMG/M
3300017955\|Ga0187817_10995257	Not Available	537	Open in IMG/M
3300017994\|Ga0187822_10111502	Not Available	845	Open in IMG/M
3300017999\|Ga0187767_10064005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	945	Open in IMG/M
3300018060\|Ga0187765_10220244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	1105	Open in IMG/M
3300021560\|Ga0126371_11396216	Not Available	831	Open in IMG/M
3300027050\|Ga0209325_1045643	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_112404635	Not Available	1276	Open in IMG/M
3300031543\|Ga0318516_10625388	Not Available	614	Open in IMG/M
3300031561\|Ga0318528_10684718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	549	Open in IMG/M
3300031573\|Ga0310915_10063201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2420	Open in IMG/M
3300031680\|Ga0318574_10230070	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300031682\|Ga0318560_10052503	Not Available	2013	Open in IMG/M
3300031715\|Ga0307476_11067516	Not Available	594	Open in IMG/M
3300031723\|Ga0318493_10447464	Not Available	710	Open in IMG/M
3300031736\|Ga0318501_10603283	Not Available	603	Open in IMG/M
3300031744\|Ga0306918_11132644	Not Available	605	Open in IMG/M
3300031744\|Ga0306918_11505071	Not Available	514	Open in IMG/M
3300031753\|Ga0307477_10718400	Not Available	667	Open in IMG/M
3300031770\|Ga0318521_11051131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300031771\|Ga0318546_10173150	Not Available	1464	Open in IMG/M
3300031778\|Ga0318498_10369506	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031781\|Ga0318547_10141690	Not Available	1408	Open in IMG/M
3300031821\|Ga0318567_10179007	Not Available	1180	Open in IMG/M
3300031833\|Ga0310917_10177656	Not Available	1416	Open in IMG/M
3300031833\|Ga0310917_10725450	Not Available	672	Open in IMG/M
3300031879\|Ga0306919_10113673	Not Available	1926	Open in IMG/M
3300031890\|Ga0306925_10148062	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300031890\|Ga0306925_10206457	Not Available	2119	Open in IMG/M
3300031890\|Ga0306925_10296244	Not Available	1740	Open in IMG/M
3300031890\|Ga0306925_12018642	Not Available	543	Open in IMG/M
3300031896\|Ga0318551_10111576	Not Available	1465	Open in IMG/M
3300031910\|Ga0306923_10015385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7934	Open in IMG/M
3300031910\|Ga0306923_11002116	Not Available	907	Open in IMG/M
3300031910\|Ga0306923_11957572	Not Available	596	Open in IMG/M
3300031912\|Ga0306921_10170182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2551	Open in IMG/M
3300031912\|Ga0306921_10427612	Not Available	1544	Open in IMG/M
3300031912\|Ga0306921_10501956	Not Available	1410	Open in IMG/M
3300031941\|Ga0310912_10107664	Not Available	2063	Open in IMG/M
3300031942\|Ga0310916_11052284	Not Available	677	Open in IMG/M
3300031945\|Ga0310913_10783707	Not Available	673	Open in IMG/M
3300031946\|Ga0310910_10105111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2102	Open in IMG/M
3300031954\|Ga0306926_10244367	Not Available	2225	Open in IMG/M
3300032001\|Ga0306922_11820187	Not Available	599	Open in IMG/M
3300032035\|Ga0310911_10041530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2356	Open in IMG/M
3300032035\|Ga0310911_10069689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1875	Open in IMG/M
3300032041\|Ga0318549_10334873	Not Available	682	Open in IMG/M
3300032042\|Ga0318545_10019888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2127	Open in IMG/M
3300032042\|Ga0318545_10289142	Not Available	589	Open in IMG/M
3300032044\|Ga0318558_10617219	Not Available	542	Open in IMG/M
3300032051\|Ga0318532_10125501	Not Available	909	Open in IMG/M
3300032059\|Ga0318533_10613431	Not Available	798	Open in IMG/M
3300032066\|Ga0318514_10719519	Not Available	531	Open in IMG/M
3300032076\|Ga0306924_11105204	Not Available	864	Open in IMG/M
3300032091\|Ga0318577_10067886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1629	Open in IMG/M
3300032180\|Ga0307471_103767621	Not Available	536	Open in IMG/M
3300032261\|Ga0306920_100261107	All Organisms → cellular organisms → Bacteria → Proteobacteria	2583	Open in IMG/M
3300032261\|Ga0306920_100287771	Not Available	2449	Open in IMG/M
3300032261\|Ga0306920_101451275	Not Available	981	Open in IMG/M
3300032261\|Ga0306920_104164233	Not Available	522	Open in IMG/M
3300033289\|Ga0310914_10160365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1990	Open in IMG/M
3300033289\|Ga0310914_11824814	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.19%
Aquatic	Environmental → Aquatic	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.19%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.86%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1001184341	3300005332	Tropical Forest Soil	MPRYFFTIQGQDRVEDDPDGTYLPDAEAALCYAEYTIRELRRKSGYNDLA
Ga0066388_1008060981	3300005332	Tropical Forest Soil	MLRYFFTIHRHGRAENDPDGTYLPDAEAALSYADCTIRELRKQGVYDDDLSLMMI
Ga0066388_1023684501	3300005332	Tropical Forest Soil	LLAETGRSMRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPAL
Ga0066388_1056249592	3300005332	Tropical Forest Soil	MPRYFFTIHRGDRIKDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLAL
Ga0066388_1056575641	3300005332	Tropical Forest Soil	VLRYFFTIHGRDRVEDDPDGIDLPDAAAALSHAEHTIRELRKKSGYTYNNDPALMMFV
Ga0066903_1010409024	3300005764	Tropical Forest Soil	MPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYTYNNDPA
Ga0066903_1030886501	3300005764	Tropical Forest Soil	MPQYFFTIHGQDRVADDPEGTYLPDVAAALSYAEYTIRGLRKKSGY
Ga0066903_1065323691	3300005764	Tropical Forest Soil	VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA
Ga0066903_1068797122	3300005764	Tropical Forest Soil	MRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPALMMIVK
Ga0066903_1086554201	3300005764	Tropical Forest Soil	MPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIQELRKKSGYNDPGSHDDDKG*
Ga0075026_1005419942	3300006057	Watersheds	MPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKSGYE
Ga0066653_105352551	3300006791	Soil	VPRYFFTIHGRDRVEDDHDGTYLPDVAAALSYAEHTIRDLRKESGYKDDPALM
Ga0066660_109577852	3300006800	Soil	VAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVT
Ga0126373_106492471	3300010048	Tropical Forest Soil	MPRYFFTIYGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKKSGYKNDLALMM
Ga0126373_106674461	3300010048	Tropical Forest Soil	MPRYSFTIHGRDRVADDPDGTYLPDEAAALSYAEYTIRELRKKSGYKNDLALMMFVK
Ga0126373_113311981	3300010048	Tropical Forest Soil	MPRYFFTIHRQHRVENDHAGTYLPNVAAALSYAEDTIWELRKQNGYKDDLSLMMMVRD
Ga0126376_124872801	3300010359	Tropical Forest Soil	VPQYFFTIHRGNRVKDDPDGTYLPDLAAALSYAEHTIQELRKKSGYDDLT
Ga0126378_109929981	3300010361	Tropical Forest Soil	VDQVEHDPDGTYLRNVAEALSHAEYTIREQRKKSSYNDLALMMIVTDQSR
Ga0126378_119632671	3300010361	Tropical Forest Soil	VPQYFFAIHKGDRIKDDPDGTYLPDVMAALSYAEHTIRELRKKSGYDDLDLMMFVTDQS
Ga0126381_1037463332	3300010376	Tropical Forest Soil	MPRYFFSIHGRAEVDHDPADTYLPDVAAALSYAEHKIQELREKSDYNDPALMM
Ga0126381_1045934483	3300010376	Tropical Forest Soil	MPRYFFTIHGRAKIEDDPAGTYLPDVAAPLSYAEHTIRELCKKSG
Ga0124850_10424644	3300010863	Tropical Forest Soil	MPRYFFTIHREDRTQNDPDGTYLSDAEAALSYADYTIRELRKKSVYKDD
Ga0137376_106212731	3300012208	Vadose Zone Soil	VPQYFFTIHGRERVEDDRSGTYLPDVAAALSYAEHTIRVLRNESGYKDD
Ga0126369_108309211	3300012971	Tropical Forest Soil	MPGYFFTIHRQDRVENAADTYLPDVPAALSYAEDTIRGLRKQNGYKDN
Ga0182036_107538872	3300016270	Soil	VPRYFFTIHRRDRVEDDPDGTYLPDAETALCYADYTIRELRKKSAYKDDLTL
Ga0182041_117880041	3300016294	Soil	VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSG
Ga0182035_101863001	3300016341	Soil	VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0182035_109731831	3300016341	Soil	VPRYFFRIHREHRVEDDPDGTYLPDDTAALSYAEHTIRELRKKSGYTYNNDPA
Ga0182035_115175052	3300016341	Soil	MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELR
Ga0182035_120290641	3300016341	Soil	MPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSL
Ga0182032_107833411	3300016357	Soil	VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSG
Ga0182032_108227371	3300016357	Soil	MPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDDLSLMMMVKD
Ga0182032_116292492	3300016357	Soil	MPQYFFTIHGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKK
Ga0182032_116698022	3300016357	Soil	VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKK
Ga0182034_109488061	3300016371	Soil	VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLA
Ga0182034_112001761	3300016371	Soil	SLETGRSMPRYFFTIHGLDRVADDPEGTYLPDEAAALSYAEYTIRELRKKSGYNRPA
Ga0182040_104013463	3300016387	Soil	VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMD
Ga0182040_104928341	3300016387	Soil	VPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0182037_101035681	3300016404	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF
Ga0182039_109329231	3300016422	Soil	VPRYSFTIHGRDRVADDPDGTYLPDVAVALSYAEYTIRELRKKSGYKNDLALMM
Ga0182039_119561112	3300016422	Soil	MPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYNDLALMM
Ga0182038_117399503	3300016445	Soil	MPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGYN
Ga0187817_109531441	3300017955	Freshwater Sediment	MSERLMPRYFFTIHGRAKIEDDRAGTYLPDVEAAFSYAEYTIRELRKKSGYNDPALMMII
Ga0187817_109952571	3300017955	Freshwater Sediment	MPRYFFTIHGREQDDPDGTYLPDVAAALSYAEYTIRELRKKSGYNDLALMMMVNDEA
Ga0187822_101115021	3300017994	Freshwater Sediment	MPRYFFTIHKQDRVEDDPGGTYLPDAEAALSYAEYTIRELRKKSGYKDDL
Ga0187767_100640051	3300017999	Tropical Peatland	MECSVYRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP
Ga0187765_102202441	3300018060	Tropical Peatland	MECSVHRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP
Ga0126371_113962163	3300021560	Tropical Forest Soil	VPQYFFTIHRGDRVEDDRDGTYLPDDTAALSYAEHTIWGLRKKSGY
Ga0209325_10456432	3300027050	Forest Soil	MPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKRAATRMICL
Ga0170824_1124046352	3300031231	Forest Soil	VAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVTDH
Ga0318516_106253881	3300031543	Soil	VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYTYNNDP
Ga0318528_106847181	3300031561	Soil	MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKK
Ga0310915_100632011	3300031573	Soil	MPRYFFTTHGRAKVEDDPAGTDLPDVSAALSYAEYTIRELRNKS
Ga0318574_102300702	3300031680	Soil	MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKRAATGIIWL
Ga0318560_100525034	3300031682	Soil	MPRYFFTIQRQDRVENYPGDAYLPDVAAALSYADDTIQELRKQNGYKDDLSLMM
Ga0307476_110675162	3300031715	Hardwood Forest Soil	MPRYFFTIRRQDRFENGPDSAYLPDAEAALSYADYAIRGLRKKSGYEDDLSLMM
Ga0318493_104474642	3300031723	Soil	MPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYKDDL
Ga0318501_106032831	3300031736	Soil	MPRYFFTIHRQDRAQNDPDGTYLPDAEAALSYADHTIQELRKKNAYEGD
Ga0306918_111326443	3300031744	Soil	MPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDD
Ga0306918_115050711	3300031744	Soil	MPRYFFTIHRQDRVENDHAGTYLPDVAAALSYAEYTIRELRKQNGYKDDLALMMMVKEA
Ga0307477_107184001	3300031753	Hardwood Forest Soil	MPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDEVLSLPFFPGQ
Ga0318509_100745841	3300031768	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKS
Ga0318521_110511311	3300031770	Soil	VPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVMD
Ga0318546_101731503	3300031771	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTDQS
Ga0318498_103695061	3300031778	Soil	MPRYFFTIHGQDRVADDPEGTYLPDAAVALFYAEYTIRGLRKKSGYEDDLSLM
Ga0318547_101416903	3300031781	Soil	MPRYFFTIHGQDRVADDPESTYLPDEAAALSYTEYKIRELRKKSGYTDSGSDDVRR
Ga0318567_101790073	3300031821	Soil	MPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYK
Ga0310917_101776561	3300031833	Soil	MRRYFFTIHGQDRVADDPEGTYLPDEAAALSYAEYTIRVLRKKSDYEDDLSLMMMV
Ga0310917_107254501	3300031833	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0306919_101136731	3300031879	Soil	VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC
Ga0306925_101480621	3300031890	Soil	VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYKD
Ga0306925_102064571	3300031890	Soil	MPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSLMMMV
Ga0306925_102962444	3300031890	Soil	VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDL
Ga0306925_120186421	3300031890	Soil	VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLALMMIV
Ga0318551_101115761	3300031896	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMM
Ga0306923_100153855	3300031910	Soil	MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYI
Ga0306923_110021161	3300031910	Soil	VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMMFV
Ga0306923_119575721	3300031910	Soil	VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLALM
Ga0306921_101701823	3300031912	Soil	VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAESTIRELQKKM
Ga0306921_104276122	3300031912	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVT
Ga0306921_105019561	3300031912	Soil	VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIQELRKKSGYNDLALMMFVTDQST
Ga0310912_101076645	3300031941	Soil	MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSDYTYNND
Ga0310916_110522841	3300031942	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC
Ga0310913_107837072	3300031945	Soil	VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKS
Ga0310910_101051111	3300031946	Soil	MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIR
Ga0306926_102443675	3300031954	Soil	MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSD
Ga0306922_118201871	3300032001	Soil	MPRYFFTIHRRDRVENDPASTCLPDEAAALSYAEYTIRELRIQNGYKDDL
Ga0310911_100415301	3300032035	Soil	MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYI
Ga0310911_100696893	3300032035	Soil	VPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVM
Ga0318549_103348731	3300032041	Soil	VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYT
Ga0318545_100198884	3300032042	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTD
Ga0318545_102891421	3300032042	Soil	MPRYFFTIHRQDRAENDPEGTYLQDAEAALSYADYTIRELRKKSVYE
Ga0318558_106172191	3300032044	Soil	MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKKSGYKD
Ga0318532_101255012	3300032051	Soil	MPRYFFTIHGRAKIEDDPAGTYLPDVAAALSYAEYTIRELLKKSGYTYNNDPA
Ga0318533_106134312	3300032059	Soil	VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMM
Ga0318514_107195192	3300032066	Soil	VPRYFFRIHREHRVEDDPDGTYLPDDTAAISYAEHTIRELRKKSGYDDLSL
Ga0306924_111052044	3300032076	Soil	MPRYFFTIQGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGY
Ga0318577_100678863	3300032091	Soil	MPRYFFTIHRQDRVEDDRDGTYLRNAEAALSYADYTIRELRKKSGYKDDLSL
Ga0307471_1037676211	3300032180	Hardwood Forest Soil	MPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDE
Ga0306920_1002611071	3300032261	Soil	VPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF
Ga0306920_1002877711	3300032261	Soil	MRYFFTIHGQERVADDPEGTYLPDEAAALSYAEYTIRELRKKSVYNDLALMMFVKD
Ga0306920_1014512751	3300032261	Soil	VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDL
Ga0306920_1041642331	3300032261	Soil	MPRYFFTIHGRAQVEDDPAGTYLPDVAAALSYAEHTIRELRKKS
Ga0310914_101603653	3300033289	Soil	MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKKSGYKDN
Ga0310914_118248142	3300033289	Soil	MPRYFFTIHRQDRAENDPEGTYLQDAEAALFYADYTIRELRKKIVYEDDLSLMM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095260

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences