Metagenome / Metatranscriptome Family F095384

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095384
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	70 residues
Representative Sequence	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	83.81 %
% of genes near scaffold ends (potentially truncated)	29.52 %
% of genes from short scaffolds (< 2000 bps)	72.38 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (45.714 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.714 % of family members)
Environment Ontology (ENVO)	Unclassified (68.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.89% β-sheet: 0.00% Coil/Unstructured: 37.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00004	AAA	3.81
PF04434	SWIM	1.90
PF01370	Epimerase	0.95
PF03796	DnaB_C	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.90
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.90
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	1.90
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.95
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.76 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	84.76 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	39.05 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	39.05 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	39.05 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	39.05 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	31.43 %
Unclassified	root	N/A	15.24 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	31.43 %
Unclassified	root	N/A	15.24 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002363\|B570J29624_108585	Not Available	605	Open in IMG/M
3300002835\|B570J40625_100146138	All Organisms → Viruses → Predicted Viral	2716	Open in IMG/M
3300002835\|B570J40625_100630139	Not Available	975	Open in IMG/M
3300002835\|B570J40625_101554653	Not Available	541	Open in IMG/M
3300003277\|JGI25908J49247_10041683	All Organisms → Viruses → Predicted Viral	1236	Open in IMG/M
3300003277\|JGI25908J49247_10082119	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	793	Open in IMG/M
3300003388\|JGI25910J50241_10006960	All Organisms → Viruses → Predicted Viral	4122	Open in IMG/M
3300003388\|JGI25910J50241_10066883	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300003393\|JGI25909J50240_1030014	All Organisms → Viruses → Predicted Viral	1198	Open in IMG/M
3300003429\|JGI25914J50564_10013868	All Organisms → Viruses → Predicted Viral	2513	Open in IMG/M
3300004112\|Ga0065166_10406034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569	Open in IMG/M
3300004125\|Ga0066182_10135285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300005517\|Ga0070374_10303658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	810	Open in IMG/M
3300005517\|Ga0070374_10376321	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	715	Open in IMG/M
3300005517\|Ga0070374_10482552	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	619	Open in IMG/M
3300005582\|Ga0049080_10009514	All Organisms → Viruses → Predicted Viral	3367	Open in IMG/M
3300005582\|Ga0049080_10026354	Not Available	2029	Open in IMG/M
3300005662\|Ga0078894_10132369	All Organisms → Viruses → Predicted Viral	2228	Open in IMG/M
3300005662\|Ga0078894_10157557	All Organisms → Viruses → Predicted Viral	2043	Open in IMG/M
3300005662\|Ga0078894_10202341	All Organisms → Viruses → Predicted Viral	1798	Open in IMG/M
3300005662\|Ga0078894_10210394	All Organisms → Viruses → Predicted Viral	1761	Open in IMG/M
3300005662\|Ga0078894_10216362	All Organisms → Viruses → Predicted Viral	1735	Open in IMG/M
3300005662\|Ga0078894_10223178	All Organisms → Viruses → Predicted Viral	1707	Open in IMG/M
3300005662\|Ga0078894_10391405	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300005662\|Ga0078894_10471527	Not Available	1129	Open in IMG/M
3300005662\|Ga0078894_10613005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	968	Open in IMG/M
3300005662\|Ga0078894_11007470	Not Available	716	Open in IMG/M
3300005662\|Ga0078894_11084295	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684	Open in IMG/M
3300005662\|Ga0078894_11634333	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	530	Open in IMG/M
3300006639\|Ga0079301_1021986	All Organisms → Viruses → Predicted Viral	2216	Open in IMG/M
3300008108\|Ga0114341_10035907	All Organisms → Viruses → Predicted Viral	3342	Open in IMG/M
3300008110\|Ga0114343_1010656	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6408	Open in IMG/M
3300008111\|Ga0114344_1000813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	24518	Open in IMG/M
3300008111\|Ga0114344_1074708	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300008113\|Ga0114346_1025098	All Organisms → Viruses → Predicted Viral	3168	Open in IMG/M
3300008113\|Ga0114346_1303313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	548	Open in IMG/M
3300008259\|Ga0114841_1256976	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300008448\|Ga0114876_1106138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1107	Open in IMG/M
3300009024\|Ga0102811_1321650	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	581	Open in IMG/M
3300009152\|Ga0114980_10018504	All Organisms → Viruses → Predicted Viral	4373	Open in IMG/M
3300009419\|Ga0114982_1040613	All Organisms → Viruses → Predicted Viral	1486	Open in IMG/M
3300010354\|Ga0129333_10602538	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	953	Open in IMG/M
3300011010\|Ga0139557_1085242	Not Available	524	Open in IMG/M
3300012012\|Ga0153799_1074165	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300012663\|Ga0157203_1020631	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	966	Open in IMG/M
3300012665\|Ga0157210_1011082	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300013004\|Ga0164293_10088104	All Organisms → Viruses → Predicted Viral	2407	Open in IMG/M
3300013004\|Ga0164293_10538243	Not Available	766	Open in IMG/M
3300013005\|Ga0164292_10100029	All Organisms → Viruses → Predicted Viral	2187	Open in IMG/M
3300013006\|Ga0164294_10622944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	731	Open in IMG/M
3300013014\|Ga0164295_10066542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2690	Open in IMG/M
3300013014\|Ga0164295_11273522	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	571	Open in IMG/M
3300018868\|Ga0187844_10347526	Not Available	613	Open in IMG/M
3300019093\|Ga0187843_10451361	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515	Open in IMG/M
3300020151\|Ga0211736_10087785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300020151\|Ga0211736_10620699	All Organisms → Viruses → Predicted Viral	1410	Open in IMG/M
3300020159\|Ga0211734_10010522	Not Available	881	Open in IMG/M
3300020160\|Ga0211733_10137274	All Organisms → Viruses → Predicted Viral	1554	Open in IMG/M
3300020160\|Ga0211733_10863422	Not Available	925	Open in IMG/M
3300020162\|Ga0211735_10961563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	907	Open in IMG/M
3300020519\|Ga0208223_1014604	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300020519\|Ga0208223_1026587	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	762	Open in IMG/M
3300020527\|Ga0208232_1041083	Not Available	605	Open in IMG/M
3300020528\|Ga0208224_1011339	All Organisms → Viruses → Predicted Viral	1359	Open in IMG/M
3300020528\|Ga0208224_1038897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300021141\|Ga0214163_1038249	All Organisms → Viruses → Predicted Viral	1314	Open in IMG/M
3300021141\|Ga0214163_1098493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679	Open in IMG/M
3300021961\|Ga0222714_10180662	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300024346\|Ga0244775_10112067	All Organisms → Viruses → Predicted Viral	2315	Open in IMG/M
3300024862\|Ga0256317_1089278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	677	Open in IMG/M
3300024863\|Ga0255246_1172044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300027114\|Ga0208009_1019419	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300027125\|Ga0255106_1003722	All Organisms → Viruses → Predicted Viral	2737	Open in IMG/M
3300027125\|Ga0255106_1015861	All Organisms → Viruses → Predicted Viral	1134	Open in IMG/M
3300027144\|Ga0255102_1047791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	692	Open in IMG/M
3300027145\|Ga0255114_1013285	All Organisms → Viruses → Predicted Viral	1679	Open in IMG/M
3300027148\|Ga0255115_1009422	All Organisms → Viruses → Predicted Viral	2150	Open in IMG/M
3300027154\|Ga0255111_1003516	All Organisms → Viruses → Predicted Viral	4124	Open in IMG/M
3300027286\|Ga0255129_1044240	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300027295\|Ga0255126_1008544	All Organisms → Viruses → Predicted Viral	2908	Open in IMG/M
3300027375\|Ga0255137_1022556	All Organisms → Viruses → Predicted Viral	1346	Open in IMG/M
3300027563\|Ga0209552_1000362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14558	Open in IMG/M
3300027710\|Ga0209599_10005192	All Organisms → Viruses → Predicted Viral	4574	Open in IMG/M
3300027720\|Ga0209617_10115030	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300027733\|Ga0209297_1112077	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300027769\|Ga0209770_10208064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	770	Open in IMG/M
3300027769\|Ga0209770_10328028	Not Available	578	Open in IMG/M
3300027797\|Ga0209107_10257298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	837	Open in IMG/M
3300027798\|Ga0209353_10360241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300031784\|Ga0315899_10112022	All Organisms → Viruses → Predicted Viral	2803	Open in IMG/M
3300031951\|Ga0315904_10267502	All Organisms → Viruses → Predicted Viral	1624	Open in IMG/M
3300032092\|Ga0315905_10000417	Not Available	46723	Open in IMG/M
3300033816\|Ga0334980_0194924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300033992\|Ga0334992_0094670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1607	Open in IMG/M
3300033992\|Ga0334992_0311862	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300033992\|Ga0334992_0494074	Not Available	531	Open in IMG/M
3300033994\|Ga0334996_0044773	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2770	Open in IMG/M
3300034018\|Ga0334985_0252844	All Organisms → Viruses → Predicted Viral	1130	Open in IMG/M
3300034019\|Ga0334998_0271069	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300034061\|Ga0334987_0030029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4744	Open in IMG/M
3300034071\|Ga0335028_0019831	All Organisms → Viruses → Predicted Viral	4685	Open in IMG/M
3300034082\|Ga0335020_0248246	Not Available	881	Open in IMG/M
3300034102\|Ga0335029_0383498	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	854	Open in IMG/M
3300034104\|Ga0335031_0098029	All Organisms → Viruses → Predicted Viral	2070	Open in IMG/M
3300034284\|Ga0335013_0104941	All Organisms → Viruses → Predicted Viral	1974	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.19%
Terrestrial	Environmental → Terrestrial	3.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.38%
Marine	Environmental → Aquatic → Marine	3.81%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.81%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	40.00%
Lake	Environmental → Aquatic → Freshwater → Lake	36.19%
River	Environmental → Aquatic → Freshwater → River	10.48%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.86%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.95%
Coastal	Environmental → Aquatic → Marine → Coastal	0.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.19%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	27.62%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.43%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	10.48%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.90%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.95%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.95%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.71%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	18.10%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	10.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.57%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.81%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.86%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.95%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.95%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.95%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.95%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002363	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024862	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024863	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027125	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h	Environmental	Open in IMG/M
3300027144	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0h	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027148	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8h	Environmental	Open in IMG/M
3300027154	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027286	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8d	Environmental	Open in IMG/M
3300027295	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8d	Environmental	Open in IMG/M
3300027375	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8d	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29624_1085851	3300002363	Freshwater	MFHTDNQVEFKEILRKFTDATYKIHGTHAYAAGYLESMVVQMLALMSKREQKGFIDSMKSVVNKQQKELA*
B570J40625_1001461382	3300002835	Freshwater	MFHTDNQVEFKQALRKFTDAAYKNHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSITAVAQKQQKELA*
B570J40625_1006301392	3300002835	Freshwater	MFHTDNQVEFKEILRKFTDASYDKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVAKKQRETA*
B570J40625_1015546531	3300002835	Freshwater	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA*
JGI25908J49247_100416837	3300003277	Freshwater Lake	MFHTDNQVEFKEVLRNFTDASYKNHGSHAYAAGYLESMAVQMLALLSKREQKGFIDSMAAVVKK
JGI25908J49247_100821193	3300003277	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*HSS
JGI25910J50241_100069607	3300003388	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENXGXHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQREXA*
JGI25910J50241_100668835	3300003388	Freshwater Lake	MFHTDNQVEFKEVLRNFTDASYKNHGSHAYAAGYLESMAVQMLALLSKREQKGFIDSMAAVVKKQREMA*
JGI25909J50240_10300143	3300003393	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELAHSSPKTV
JGI25914J50564_100138681	3300003429	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDS
Ga0065166_104060341	3300004112	Freshwater Lake	MFHTDNQVEFKQSLRSFTEAAYNNYGGHAYAAGYLESLAVQMLAVMSKREQQAFIKAMKEATKRQLSETKEWA*
Ga0066182_101352852	3300004125	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAA
Ga0070374_103036581	3300005517	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0070374_103763212	3300005517	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQREMA*
Ga0070374_104825521	3300005517	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0049080_100095143	3300005582	Freshwater Lentic	MFHTDQQVEFKQTLRRFTDAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAKELV*
Ga0049080_100263542	3300005582	Freshwater Lentic	MFHTDNQVEFKEVLRKFSDATYKQYGSHAYASGYLESMAVQMLALMSKREQKGFIDSMKAVVNKQQKELA*
Ga0078894_101323691	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVAKKQREMA*
Ga0078894_101575575	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA*
Ga0078894_102023414	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFTDATYKIHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMKSVVNKQQKELA*
Ga0078894_102103941	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFSDASYKNYGSHAYAAGYLEGLAVQMLALMSKREQKAFISSMAAVALKQRKL
Ga0078894_102163623	3300005662	Freshwater Lake	MFHTDNQVEFKQTLRRFTDAAYKNYDGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQEAAAKQQQQAAAKECV*
Ga0078894_102231787	3300005662	Freshwater Lake	MFHTDNQVEFKEALRRFTDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIEGIAQATTKQEKELV*
Ga0078894_103914053	3300005662	Freshwater Lake	MFHTDNQVEFKEVLRKFTDATYEIHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMNSVVKKQREMA*
Ga0078894_104715272	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQREMA*
Ga0078894_106130053	3300005662	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVAKKQREMA*
Ga0078894_110074702	3300005662	Freshwater Lake	MFHTDNQVAFKQSLRKFTEAAYKNYGSHAYSAGYLESLAVQMLALMSKREQKAFIDNMTAAAKKQEVDTWRQVTL*
Ga0078894_110842952	3300005662	Freshwater Lake	MFHTDAQVEFKQTLRRFTEAARVNYDGHAYAAGYLESLAVQMLAVMSKREQQGFIKAMQEAARTQQQQAAAKERV*
Ga0078894_116343331	3300005662	Freshwater Lake	GAQMFHTDNQVEFKEILRKFSDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVAKKQRETA*
Ga0079301_10219866	3300006639	Deep Subsurface	MFHTDNQVAFKQSLRKFTEAAYNNYGSHAYSAGYLESLAVQMLAVMSKREQQAFIKAMQDAQQRQQAQAKDTAK*
Ga0114341_100359071	3300008108	Freshwater, Plankton	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQ
Ga0114343_10106566	3300008110	Freshwater, Plankton	MFHTDNQVEFKEILRKFSDATYEKYGSRAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0114344_100081330	3300008111	Freshwater, Plankton	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0114344_10747081	3300008111	Freshwater, Plankton	GSIINTYRHKGAQMFHTDNQVEFKEILRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0114346_10250981	3300008113	Freshwater, Plankton	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKK
Ga0114346_13033131	3300008113	Freshwater, Plankton	KGSIINTYRHKGAQMFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0114841_12569762	3300008259	Freshwater, Plankton	MFHTDNQVEFKEVLRKFTDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQREMA*
Ga0114876_11061383	3300008448	Freshwater Lake	MFHTDNQVEFKEILRKFTDATYKNHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0102811_13216502	3300009024	Estuarine	MFHTDNQVEFKEILRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA*
Ga0114980_100185049	3300009152	Freshwater Lake	MFHTDQQVEFKQTLRKFTDVAYNNYGNHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQNQAKELV*
Ga0114982_10406134	3300009419	Deep Subsurface	MFHTDNQVEFKEVLRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0129333_106025382	3300010354	Freshwater To Marine Saline Gradient	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLVSMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0139557_10852422	3300011010	Freshwater	MFHTDNQVEFKEVLRKFTDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMKAVVNKQQKELV*
Ga0153799_10741652	3300012012	Freshwater	MFHTDNQVEFKEILRKFTDATYKNHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA*
Ga0157203_10206313	3300012663	Freshwater	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMNSVVKKQRQVA*
Ga0157210_10110822	3300012665	Freshwater	MFHTDNQVEFKEVLRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMKDVVKKQQTAVDSWRRVTV*
Ga0164293_100881042	3300013004	Freshwater	MSTMFHTDTQVEFKQALNKFTDTAYKNYDSHAYAAGYLSSLAVQMLAVMSKREQQGFIRAMQDAVKRQQTQAKVTV*
Ga0164293_105382431	3300013004	Freshwater	QGAQMFHTDNQVEFKEILRKFTDATYKIHGTHAYAAGYLESMVVQMLALMSKREQKGFIDSMKSVVNKQQKELA*
Ga0164292_101000293	3300013005	Freshwater	MFHTDNQVEFKQALRKFTDAAYKNHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSMTAVAQKQQKELA*
Ga0164294_106229442	3300013006	Freshwater	MFHTDNQVAFKQALNKFTDTSYKNYNSHAYAAGYLSSLAVQMLAQMSKREQQGFIKAMQDATQRQQAIAKDTAK*
Ga0164295_100665423	3300013014	Freshwater	MFHTDLQVEFKQTLRKFTDVAYNNYGNHAYAAGYLESMAVQMLSVMSKREQQGFIRAMQSAVKQQQNQAKELV*
Ga0164295_112735221	3300013014	Freshwater	MSTMFHTDNQVAFKQALNKFTDTSYKNYDSHAYAAGYLSSLAVQMLAQMSKREQQGFIKAMQDATQRQQAIAKDTAK*
Ga0187844_103475263	3300018868	Freshwater	MSTMFHTDNQVAFKQALNKFTDTSYKNYDSHAYAAGYLSSLAVQMLAQMSKREQQGFIKA
Ga0187843_104513612	3300019093	Freshwater	MFHTDLQVEFKQTLRKFTDVAYNNYGNHAYAAGYLESMAVQMLSVMSKREQQGFIRAMQSAVKQQQAQAKELV
Ga0211736_100877852	3300020151	Freshwater	MSTMFHTDNQVAFKQALNKFTDTAYKNYDSHAYVAGYLSSLAVQMLAVMSKREQQGFIKAMQDAQQRQQALAKDTAK
Ga0211736_106206993	3300020151	Freshwater	MFHTDNQVEFKEILRKFSDATYKIHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSMKAVVNKQQKETV
Ga0211734_100105223	3300020159	Freshwater	MSTMFHTDNQVAFKQALNKFTDTAYKNYDSHAYAAGYLSSLAVQMLAQMSKREQQGFIKAMQDAQQHQQALAKDTAK
Ga0211733_101372742	3300020160	Freshwater	MFHTDNQVEFKEILRKFSDATYKIHGTHAYATGYLESMAVQMLALMSKREQKGFIDSMKSVVNKQKETV
Ga0211733_108634224	3300020160	Freshwater	MSTMFHTDNQVAFKQALNKFTDTAYKNYDSHAYAAGYLSSLAVQMLSVMSKREQQGFIKAMQDAVQRQQATAKERV
Ga0211735_109615632	3300020162	Freshwater	MFHTDNQVEFKEILRKFTDATYKIHGTHAYATGYLESMAVQMLALMSKREQKGFIDSMKSVVNKQKETV
Ga0208223_10146042	3300020519	Freshwater	MFHTDNQVEFKQALRKFTDAAYKNHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSITAVAQKQQKELA
Ga0208223_10265872	3300020519	Freshwater	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0208232_10410832	3300020527	Freshwater	MFHTDNQVEFKEILRKFTDATYKIHGTHAYAAGYLESMVVQMLALMSKREQKGFIDSMKSVVNKQQKELA
Ga0208224_10113394	3300020528	Freshwater	QMFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0208224_10388971	3300020528	Freshwater	MFHTDNQVEFKQALRKFTDAAYKNHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSITA
Ga0214163_10382495	3300021141	Freshwater	MFHTDNQVEFKQALRKFTDAAYKNHGTHAYATGYLESMAVQMLAVMSKREQKGFIDSMAAVVKKQRELA
Ga0214163_10984933	3300021141	Freshwater	MFHTDNQVEFKQTLRKFTDAAYKNYDSHAYATGYLESMAVQMLAVMSKREQQGFIKAMQAAVQQQQAQAKDAV
Ga0222714_101806622	3300021961	Estuarine Water	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMADVVKKQREMA
Ga0244775_101120678	3300024346	Estuarine	MFHTDNQVEFKEILRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA
Ga0256317_10892782	3300024862	Freshwater	FHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0255246_11720441	3300024863	Freshwater	MFHTDQQVEFKQTLRRFTDAAYNNYGGHAYAAGYLESMAVQMLSVMSKREQQGFIRAMQDAVKQQQAQAKELV
Ga0208009_10194192	3300027114	Deep Subsurface	MFHTDNQVAFKQSLRKFTEAAYNNYGSHAYSAGYLESLAVQMLAVMSKREQQAFIKAMQDAQQRQQAQAKDTAK
Ga0255106_10037228	3300027125	Freshwater	MFHTDNQVEFKEILRKFTDATYKNHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMNSVVKKQQQMA
Ga0255106_10158611	3300027125	Freshwater	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSM
Ga0255102_10477912	3300027144	Freshwater	MFHTDNQVEFKEILRKFTDATYKNHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAGVVKKQREMA
Ga0255114_10132851	3300027145	Freshwater	MFHTDQQVEFKQTLRRFTDAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAKELVXVTQCLNTIKSTGRAR
Ga0255115_10094221	3300027148	Freshwater	AQMFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0255111_100351616	3300027154	Freshwater	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFID
Ga0255129_10442401	3300027286	Freshwater	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKK
Ga0255126_10085447	3300027295	Freshwater	EFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQREL
Ga0255137_10225565	3300027375	Freshwater	MFHTDQQVEFKQTLRRFTDAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQ
Ga0209552_100036229	3300027563	Freshwater Lake	MFHTDNQVEFKEVLRNFTDASYKNHGSHAYAAGYLESMAVQMLALLSKREQKGFIDSMAAVVKKQREMA
Ga0209599_1000519215	3300027710	Deep Subsurface	MFHTDNQVEFKEVLRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0209617_101150302	3300027720	Freshwater And Sediment	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMKAVVNKQQKELA
Ga0209297_11120772	3300027733	Freshwater Lake	MFHTDQQVEFKQTLRKFTDVAYNNYGNHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQNQAKELV
Ga0209770_102080641	3300027769	Freshwater Lake	MFHTDNQVEFKEILRKFSDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVV
Ga0209770_103280283	3300027769	Freshwater Lake	HTDNQVAFKQSLRKFTEAAYKNYGSHAYSAGYLESLAVQMLALMSKREQKAFIDNMTAAAKKQEVDTWRQVTV
Ga0209107_102572983	3300027797	Freshwater And Sediment	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMA
Ga0209353_103602411	3300027798	Freshwater Lake	MFHTDNQVEFKEVLRKFTDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVK
Ga0315899_101120221	3300031784	Freshwater	KEILRKFSDATYEKHGTHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0315904_102675027	3300031951	Freshwater	MFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQ
Ga0315905_100004173	3300032092	Freshwater	LTGLPKGSIINTYRHKGAQMFHTDNQVEFKEILRKFSDATYENYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVVKKQRELA
Ga0334980_0194924_123_335	3300033816	Freshwater	MFHTDNQVEFKEVLRKFSDATYKQYGSHAYASGYLESMAVQMLAVMSKREQKGFIDSMKAVVNKQQKELA
Ga0334992_0094670_1104_1325	3300033992	Freshwater	MFHTDQQVEFKQTLRKFTEAAYNNYDSHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAKELV
Ga0334992_0311862_224_445	3300033992	Freshwater	MFHTDQQVEFKQTLRKFTEAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQAAVKQQQAQTKEWI
Ga0334992_0494074_235_444	3300033992	Freshwater	MFHTDNQVEFKEILRKFSDATYERYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA
Ga0334996_0044773_294_503	3300033994	Freshwater	MFHTDNQVEFKEILRKFTDASYDKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMAAVAKKQRETA
Ga0334985_0252844_583_804	3300034018	Freshwater	MFHTDQQVEFKQTLRRFTDAAYNNYDSHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAKELV
Ga0334998_0271069_126_347	3300034019	Freshwater	MFHTDTQVEFKQALNKFTDTAYKNYDSHAYAAGYLSSLAVQMLAVMSKREQQGFIRAMQDAVKRQQTQAKVTV
Ga0334987_0030029_110_331	3300034061	Freshwater	MFHTDQQVEFKQTLRRFTEAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQAAVKQQQAQTKEWI
Ga0335028_0019831_470_679	3300034071	Freshwater	MFHTDNQVEFKEILRKFSDATYEKYGSHAYAAGYLESMAVQMLALMSKREQKGFIDSMASVVKKQRELA
Ga0335020_0248246_27_257	3300034082	Freshwater	MFHTDAQVEFKQTLRRFTEAARVNYDGHAYAAGYLESMAVQMLAVMSKREQQGFIKAMQEAARTQQQQQAAAKERV
Ga0335029_0383498_316_537	3300034102	Freshwater	MFHTDQQVEFKQTLRRFTEAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAKEPV
Ga0335031_0098029_1860_2069	3300034104	Freshwater	MFHTDQQVEFKQTLRRFTEAAYNNYGGHAYAAGYLESMAVQMLAVMSKREQQGFIRAMQDAVKQQQAQAK
Ga0335013_0104941_287_508	3300034284	Freshwater	MFHTDTQVEFKQALNKFTDEAYKNYDSHAYAAGYLSSLAVQMLAVMSKREQQGFIRAMQDAVKRQQTQAKVTV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095384

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences