Metagenome Family F095385

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095385
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWETVGCLTVVSAADPDEFAAWDLPTDLDLQRMELEELLDVPVGEG
Number of Associated Samples	48
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.63 %
% of genes near scaffold ends (potentially truncated)	13.33 %
% of genes from short scaffolds (< 2000 bps)	60.00 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (45.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (47.619 % of family members)
Environment Ontology (ENVO)	Unclassified (70.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.81% β-sheet: 11.54% Coil/Unstructured: 58.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02498	Bro-N	7.62
PF00226	DnaJ	6.67
PF05272	VirE	3.81
PF09250	Prim-Pol	3.81
PF04851	ResIII	2.86
PF13148	DUF3987	2.86
PF08273	Prim_Zn_Ribbon	2.86
PF05876	GpA_ATPase	1.90
PF04383	KilA-N	1.90
PF01844	HNH	1.90
PF01402	RHH_1	0.95
PF13936	HTH_38	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3617	Prophage antirepressor	Mobilome: prophages, transposons [X]	7.62
COG5545	Predicted P-loop ATPase and inactivated derivatives	Mobilome: prophages, transposons [X]	3.81
COG4643	Uncharacterized domain associated with phage/plasmid primase	Mobilome: prophages, transposons [X]	2.86
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
cellular organisms	root	All Organisms → cellular organisms	36.19 %
Viruses	superkingdom	All Organisms → Viruses	18.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.19 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.19 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.19 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	10.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.19 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	10.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.71 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	11.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.71 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	2.86 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2.86 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	1.90 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.95 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.95 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	11.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.62 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	5.71 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1.90 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	1.90 %
Spongiibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter	1.90 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.95 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Synechococcus phage S-LBS1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	11.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.62 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5.71 %
Spongiibacter marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter marinus	1.90 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	1.90 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1.90 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	0.95 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Synechococcus phage S-LBS1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Synechococcus phage S-CBS3	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	11.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.62 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	5.71 %
unclassified Cyanobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium	1.90 %
Spongiibacter marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter marinus	1.90 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1.90 %
Magnetospirillum sp. UT-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	0.95 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Synechococcus phage S-LBS1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Synechococcus phage S-CBS3	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	11.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.62 %
Mycobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	5.71 %
Spongiibacter marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter marinus	1.90 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1.90 %
Cyanobium sp. BA20m-p-22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. BA20m-p-22	0.95 %
Cyanobium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp.	0.95 %
Magnetospirillum sp. UT-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	0.95 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Synechococcus phage S-LBS1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001255\|B570J13889_100106	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300001255\|B570J13889_100610	Not Available	883	Open in IMG/M
3300001282\|B570J14230_10109529	Not Available	823	Open in IMG/M
3300001533\|MLSed_10012663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	6200	Open in IMG/M
3300002394\|B570J29614_1005258	Not Available	904	Open in IMG/M
3300002408\|B570J29032_108879346	Not Available	530	Open in IMG/M
3300002408\|B570J29032_108890018	Not Available	533	Open in IMG/M
3300002408\|B570J29032_109388964	Not Available	730	Open in IMG/M
3300002835\|B570J40625_100026012	Not Available	9513	Open in IMG/M
3300002835\|B570J40625_100047212	All Organisms → cellular organisms → Bacteria	6232	Open in IMG/M
3300002835\|B570J40625_100109987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3344	Open in IMG/M
3300002835\|B570J40625_100343087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300006639\|Ga0079301_1021087	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300006639\|Ga0079301_1062559	Not Available	1184	Open in IMG/M
3300007162\|Ga0079300_10037447	Not Available	1616	Open in IMG/M
3300007541\|Ga0099848_1035473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	2060	Open in IMG/M
3300007541\|Ga0099848_1100780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1108	Open in IMG/M
3300009124\|Ga0118687_10419728	Not Available	519	Open in IMG/M
3300010296\|Ga0129348_1150181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	806	Open in IMG/M
3300010354\|Ga0129333_10014414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	7516	Open in IMG/M
3300010354\|Ga0129333_10015003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7362	Open in IMG/M
3300010354\|Ga0129333_10043751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	4206	Open in IMG/M
3300010354\|Ga0129333_10335248	Not Available	1348	Open in IMG/M
3300010354\|Ga0129333_10607640	Not Available	948	Open in IMG/M
3300013004\|Ga0164293_10015151	All Organisms → Viruses	6472	Open in IMG/M
3300013004\|Ga0164293_10068136	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	2811	Open in IMG/M
3300013004\|Ga0164293_10539973	Not Available	764	Open in IMG/M
3300013004\|Ga0164293_10790498	Not Available	602	Open in IMG/M
3300013005\|Ga0164292_10108422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. BA20m-p-22	2083	Open in IMG/M
3300013005\|Ga0164292_10116675	Not Available	1991	Open in IMG/M
3300013005\|Ga0164292_10149918	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1706	Open in IMG/M
3300013005\|Ga0164292_10159406	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300013005\|Ga0164292_10255672	Not Available	1217	Open in IMG/M
3300013005\|Ga0164292_10284009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1138	Open in IMG/M
3300013005\|Ga0164292_10706893	Not Available	643	Open in IMG/M
3300020480\|Ga0208201_100208	All Organisms → cellular organisms → Bacteria	5128	Open in IMG/M
3300020480\|Ga0208201_100311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp.	4444	Open in IMG/M
3300020480\|Ga0208201_101791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1929	Open in IMG/M
3300020486\|Ga0208698_104034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1280	Open in IMG/M
3300020498\|Ga0208050_1001336	Not Available	3509	Open in IMG/M
3300020498\|Ga0208050_1003419	Not Available	2036	Open in IMG/M
3300020498\|Ga0208050_1016289	Not Available	791	Open in IMG/M
3300020514\|Ga0208202_1000458	Not Available	9327	Open in IMG/M
3300020514\|Ga0208202_1010835	All Organisms → cellular organisms → Bacteria → Proteobacteria	1180	Open in IMG/M
3300020521\|Ga0208482_1033082	Not Available	671	Open in IMG/M
3300020530\|Ga0208235_1024204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	740	Open in IMG/M
3300020549\|Ga0207942_1016649	Not Available	950	Open in IMG/M
3300020551\|Ga0208360_1016404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1010	Open in IMG/M
3300020569\|Ga0208229_1003882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	3418	Open in IMG/M
3300020569\|Ga0208229_1025203	Not Available	975	Open in IMG/M
3300020570\|Ga0208465_1001212	All Organisms → cellular organisms → Bacteria	5644	Open in IMG/M
3300020570\|Ga0208465_1002733	Not Available	3242	Open in IMG/M
3300027114\|Ga0208009_1014050	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300027114\|Ga0208009_1052363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter marinus	759	Open in IMG/M
3300027380\|Ga0208432_1007304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter marinus	2105	Open in IMG/M
3300027499\|Ga0208788_1013837	All Organisms → Viruses → Predicted Viral	2800	Open in IMG/M
3300027518\|Ga0208787_1051564	Not Available	1146	Open in IMG/M
3300033816\|Ga0334980_0005335	All Organisms → cellular organisms → Bacteria	5760	Open in IMG/M
3300033978\|Ga0334977_0170983	Not Available	1112	Open in IMG/M
3300033980\|Ga0334981_0074206	Not Available	1721	Open in IMG/M
3300033980\|Ga0334981_0423550	Not Available	566	Open in IMG/M
3300033981\|Ga0334982_0015084	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	4551	Open in IMG/M
3300033981\|Ga0334982_0029063	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300033996\|Ga0334979_0184042	Not Available	1242	Open in IMG/M
3300033996\|Ga0334979_0190874	Not Available	1214	Open in IMG/M
3300034012\|Ga0334986_0019152	All Organisms → cellular organisms → Bacteria	4698	Open in IMG/M
3300034012\|Ga0334986_0062709	Not Available	2317	Open in IMG/M
3300034012\|Ga0334986_0064628	Not Available	2275	Open in IMG/M
3300034012\|Ga0334986_0155601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1315	Open in IMG/M
3300034012\|Ga0334986_0182111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1188	Open in IMG/M
3300034061\|Ga0334987_0124200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1937	Open in IMG/M
3300034061\|Ga0334987_0622010	Not Available	633	Open in IMG/M
3300034062\|Ga0334995_0072867	Not Available	2697	Open in IMG/M
3300034062\|Ga0334995_0103792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	2148	Open in IMG/M
3300034062\|Ga0334995_0120623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1945	Open in IMG/M
3300034062\|Ga0334995_0123002	Not Available	1919	Open in IMG/M
3300034062\|Ga0334995_0136870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1789	Open in IMG/M
3300034062\|Ga0334995_0236933	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300034062\|Ga0334995_0416127	Not Available	836	Open in IMG/M
3300034063\|Ga0335000_0425157	Not Available	784	Open in IMG/M
3300034071\|Ga0335028_0288560	Not Available	977	Open in IMG/M
3300034072\|Ga0310127_060368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1825	Open in IMG/M
3300034073\|Ga0310130_0001323	All Organisms → cellular organisms → Bacteria	13824	Open in IMG/M
3300034073\|Ga0310130_0005192	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	5154	Open in IMG/M
3300034073\|Ga0310130_0008047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	3873	Open in IMG/M
3300034073\|Ga0310130_0032884	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1591	Open in IMG/M
3300034073\|Ga0310130_0241609	Not Available	567	Open in IMG/M
3300034092\|Ga0335010_0104465	Not Available	1880	Open in IMG/M
3300034092\|Ga0335010_0266021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1003	Open in IMG/M
3300034101\|Ga0335027_0008229	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9084	Open in IMG/M
3300034101\|Ga0335027_0030260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	4524	Open in IMG/M
3300034101\|Ga0335027_0064246	All Organisms → cellular organisms → Bacteria → Proteobacteria	2911	Open in IMG/M
3300034101\|Ga0335027_0097330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	2253	Open in IMG/M
3300034101\|Ga0335027_0116113	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300034101\|Ga0335027_0194283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1447	Open in IMG/M
3300034101\|Ga0335027_0218005	Not Available	1342	Open in IMG/M
3300034103\|Ga0335030_0468622	Not Available	802	Open in IMG/M
3300034104\|Ga0335031_0228403	Not Available	1245	Open in IMG/M
3300034109\|Ga0335051_0410576	Not Available	640	Open in IMG/M
3300034112\|Ga0335066_0043365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	3032	Open in IMG/M
3300034112\|Ga0335066_0166470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1333	Open in IMG/M
3300034118\|Ga0335053_0246441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1148	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	85.71%
Terrestrial	Environmental → Terrestrial	14.29%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.14%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	14.29%
Marine	Environmental → Aquatic → Marine	7.62%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	47.62%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.57%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	14.29%
Coastal	Environmental → Aquatic → Marine → Coastal	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.62%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	25.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	47.62%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	25.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	8.57%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.71%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	5.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.86%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.90%
Benthic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic	0.95%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001255	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001533	Benthic freshwater microbial communities from British Columbia, Canada	Environmental	Open in IMG/M
3300002394	Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300020480	Freshwater microbial communities from Lake Mendota, WI - 16JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020486	Freshwater microbial communities from Lake Mendota, WI - 20AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020514	Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020521	Freshwater microbial communities from Lake Mendota, WI - 26SEP2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020551	Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020569	Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020570	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027380	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027499	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J13889_1001062	3300001255	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLSAPESQ*
B570J13889_1006102	3300001255	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRME
B570J14230_101095291	3300001282	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRMELE
MLSed_100126635	3300001533	Benthic	VKRATNLSLLLSRDTPWLKWWQELILNWVASWSTVGDLTVSSADGQDYTAWELPSDLELKRLELEELLDVPVGEG*
B570J29614_10052582	3300002394	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDEG*
B570J29032_1088793461	3300002408	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDEFAAWDLPTDLELQRMELGE
B570J29032_1088900181	3300002408	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELL
B570J29032_1093889641	3300002408	Freshwater	CPATVKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG*
B570J40625_1000260129	3300002835	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWASSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG*
B570J40625_1000472126	3300002835	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG*
B570J40625_1001099873	3300002835	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRMELEELLDVPVGEG*
B570J40625_1003430872	3300002835	Freshwater	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGTITVTSAADPDEWMAWDLPSDLDLKRQELEELLDAPVGEG*
Ga0079301_10210872	3300006639	Deep Subsurface	MRTADCGSCPLTMKRAASPSHLLSRDVTWLAWWQELILNWVSSWDTVGTITVTSAADPDEWTAWDLPTDLDLQRMELEELLDVPVGEG*
Ga0079301_10625592	3300006639	Deep Subsurface	MPRQTVRSCPAPVKRAASPAHLLDRSTPWLRWWQELILNWVSGWETVGCLTVTSAADPDDFAAWDLPSDLELQRMELEELLDVEVG*
Ga0079301_11181492	3300006639	Deep Subsurface	LPRQTVPSCPASVKRAASPSHLLSRDVRWLAWWQELILNWCSTWDTVSSITVTSAADPDEWTAWDLPSDLDLQRMELEELLQQTGER*
Ga0079300_100374472	3300007162	Deep Subsurface	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWDTVGTITVTSAADPDEWTAWDLPTDLDLQRMELEELLDVPVGEG*
Ga0099848_10354733	3300007541	Aqueous	VKRAATPWHLLDRSTPWLSWWQELILNWVSSWETVGCLSVTSAADPEEFATWDLPTDLELTRMELEELLQ*
Ga0099848_11007802	3300007541	Aqueous	VKRAATPWHLLDRSTPWLAWWQELLLNWVSSWHSIGCLTVTNAVDPEEFAAWDLPSDLDLKRLELEELLNTPAAH*
Ga0118687_104197282	3300009124	Sediment	VKRAATPSHLLSRDAPWLTWWQELILNWVSSWETVGCLTVSHPTDPDQWMAWDLPTDLDLKRLELEELLAVGEG*
Ga0129348_11501811	3300010296	Freshwater To Marine Saline Gradient	MKRAATPWHLLDRSTPWLAWWQELILNWVSGWETIGCLTVTSAADPDVFAAWDLPSDLDLQRLELEELLAVGEG*
Ga0129333_1001441411	3300010354	Freshwater To Marine Saline Gradient	MLVKRAASPSHLLDCSTPWLAWWQELILNWVSSWRTVGCLTVTSAADPDTFAAWDLPTDLELKRLELEEAFHR*
Ga0129333_100150037	3300010354	Freshwater To Marine Saline Gradient	LKRAATPSLLISRDATWLRWWQELILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLDAPAEHR*
Ga0129333_100437518	3300010354	Freshwater To Marine Saline Gradient	VKRAASPSHLLDLSTPWLRWWQELILNWVSSWSTIGCLTVTSAADADVFASWDLPTDTELARAELEEAFHR*
Ga0129333_103352482	3300010354	Freshwater To Marine Saline Gradient	VKRAASPSHLLDCSTPWLAWWQELILNWVSSWATIGTLVVTSADNDHQAEWHVPSDLELQRLELEEAFHR*
Ga0129333_106076402	3300010354	Freshwater To Marine Saline Gradient	VRSRPATVKRAASASHLLDRSTPWLAWWQELILNWVSSWETVGCLTVVSAADPEEFAAWDLPSDLEITRLELEELLAAPESR*
Ga0164293_100151512	3300013004	Freshwater	LKRASTPSHLISRDATWLRWWQEIILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLDAPAEQR*
Ga0164293_100681364	3300013004	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWDTVGCLTVTSAADPEEFAAWDLPSDLELTRLELEELLAAPES*
Ga0164293_105399731	3300013004	Freshwater	LKRAATPSHLISRDAHWLRWWQELILNWVSSWDTIAELTVTSADREFYMAWDLPSDLDLQRLELEELLESR*
Ga0164293_107904982	3300013004	Freshwater	LKRAATPSHLISRDAHWLRWWQEIILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLESR*
Ga0164292_101084221	3300013005	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWDTVGCLTVTSAADPEEFAAWDLPSDLELQRMELEELLSATES*
Ga0164292_101166752	3300013005	Freshwater	LKRAATPSHLISRDAHWLRWWQEIILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLDTSTAP*
Ga0164292_101499181	3300013005	Freshwater	KRAATPWHLLDRSTPWLTWWQELILNWVSGWETIGCLTVTSAADPEEFAAWDLPSDLELTRLELEELLAAPES*
Ga0164292_101594062	3300013005	Freshwater	LKRAATPSLLISRDATWLRWWQEIILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLDAPAEQR*
Ga0164292_102556722	3300013005	Freshwater	LKRAATPSLLISRDATWLRWWQELILNWVSSWDTIAELTVTSADREFYMAWDLPSDLDLQSLELEELLDTSTAS*
Ga0164292_102840091	3300013005	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWETVGCLTVTSAADPEEFAAWDLPSDLELQRMELEEL
Ga0164292_107068931	3300013005	Freshwater	PSLLISRDATWLRWWQELILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLESR*
Ga0208201_1002086	3300020480	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWETVGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG
Ga0208201_1003112	3300020480	Freshwater	VKRAASPSHLISRDVPWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRMELEELLDVPVGEG
Ga0208201_1017912	3300020480	Freshwater	MKRAASPSHLLSRDVSWLAWWQELILNWVSSWETVGTITVSSAADPDEWMAWDLPTDLDLKRLELEELLESR
Ga0208698_1040341	3300020486	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWASSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAAPES
Ga0208050_10013362	3300020498	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLSAPESQ
Ga0208050_10034192	3300020498	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRMELEELLESR
Ga0208050_10162891	3300020498	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDSIGCLTVVSAADPDEFAAWDLPTDLELQRMELEELLDVPVGEG
Ga0208202_10004588	3300020514	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWASSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG
Ga0208202_10108351	3300020514	Freshwater	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGTITVTSAADPDEWMAWDLPSDLDLKRQELEELLDAPVGEG
Ga0208202_10188922	3300020514	Freshwater	MKRATSLSLLLSRETPWLRWWQELILNWVASWSTVGDLTVSSADGEDYTAWELPTDLDLKRMELEELLESQ
Ga0208482_10330822	3300020521	Freshwater	AATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG
Ga0208235_10242042	3300020530	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDEFAAWDLPTDLELQRMELGELLAVGEDDG
Ga0207942_10166492	3300020549	Freshwater	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGCLTVTSAADPDEWMAWDLPSDLDLKRMELEELLDVPVGEG
Ga0208600_10191061	3300020550	Freshwater	GAADLVMKRATSLSLLLSRETPWLRWWQELILNWVASWSTVGDLTVSSADGEDYTAWELPTDLDLKRLELEELLESQ
Ga0208360_10164042	3300020551	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDEWTAWDLPNDVDLQRMEQEELQAVGEDEG
Ga0208229_10038822	3300020569	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDEG
Ga0208229_10252032	3300020569	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDSVGCLTITSADDPDEWMAWDLPTDLDLKRMELEELLDVPVGEG
Ga0208465_10012122	3300020570	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG
Ga0208465_10027332	3300020570	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWETVGTITVTSAADPDDWMAWDLPTDLDLKRMELEELLESQ
Ga0208009_10140502	3300027114	Deep Subsurface	MRTADCGSCPLTMKRAASPSHLLSRDVTWLAWWQELILNWVSSWDTVGTITVTSAADPDEWTAWDLPTDLDLQRMELEELLDVPVGEG
Ga0208009_10523632	3300027114	Deep Subsurface	LPRQTVPSCPASVKRAASPSHLLSRDVRWLAWWQELILNWCSTWDTVSSITVTSAADPDEWTAWDLPSDLDLQRMELEELLQQTGER
Ga0208432_10073046	3300027380	Deep Subsurface	VKRAASPSHLLSRDVRWLAWWQELILNWCSTWDTVSSITVTSAADPDEWTAWDLPSDLDLQRMELEELLQQTGER
Ga0208788_10138377	3300027499	Deep Subsurface	MPRQTVRSCPAPVKRAASPAHLLDRSTPWLRWWQELILNWVSGWETVGCLTVTSAADPDDFAAWDLPSDLELQRMELEELLDVEVG
Ga0208787_10515642	3300027518	Deep Subsurface	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWDTVGTITVTSAADPDEWTAWDLPTDLDLQRMELEELLDVPVGEG
Ga0334980_0005335_805_1023	3300033816	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWETVGCLTVTSAADPDEWMAWDLPTDLDLKRMELEELLESQ
Ga0334977_0170983_59_289	3300033978	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDSIGCLTVISAADPDEFAAWDLPTDLELQRMELEELLDVPAGEG
Ga0334981_0074206_120_350	3300033980	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWHTIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLDVPVGEG
Ga0334981_0423550_328_558	3300033980	Freshwater	VKRTATPWHLLDRSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDEWTAWDLPNDVDLQRMEQEELQAVGEDEG
Ga0334982_0015084_3673_3891	3300033981	Freshwater	MKRAASPSHLLSRDVSWLAWWQELILNWVSNWETVGTITVSSAADPDEWMAWDLPTDLDLVRLELEELLDSR
Ga0334982_0029063_2098_2328	3300033981	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEGEG
Ga0334979_0184042_1021_1236	3300033996	Freshwater	LKRAATPSLLISRDATWLRWWQELILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLESR
Ga0334979_0190874_691_918	3300033996	Freshwater	LKRAATPSLLISRDATWLRWWQEIILNWVSSWDTISELTVTSADREFYMAWDLPSDLDLQRLELEELLDAPAEQR
Ga0334986_0019152_80_298	3300034012	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWETVGTITVTSAADPDEWMAWDLPTDLDLKRLELEELLESR
Ga0334986_0062709_20_250	3300034012	Freshwater	VKRAAIPWHLLDRSTPWLAWWQELILNWVSSWNSISCLAVVSAADPEEFAAWDLPTDLELQRMELEELQAVGEGDG
Ga0334986_0064628_1_231	3300034012	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDSIGCLTVVSAADPDEFAAWDLPSDLELQRMELEELLDVPVGEG
Ga0334986_0155601_773_1003	3300034012	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPDEFAAWDLPSDLDLQRMELEELLDVPVGEG
Ga0334986_0182111_29_259	3300034012	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDSIGCLTVVSAADPDEFAAWDLPTDLELQRMELEELLDAPVGEG
Ga0334987_0124200_585_815	3300034061	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPDEFAAWDLPTDLELQRMELEELLDVPVGEG
Ga0334987_0622010_419_631	3300034061	Freshwater	PWHLLDRSTPWLAWWQELILNWVSSWDSIGCLTVVSAADPDEFAAWDLPTDLELQRMELEELLDVPVGEG
Ga0334995_0072867_1754_1984	3300034062	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWDTVGCLTVVSAADPDEFAAWDLPTDLELQRMELEELLDVPVGEG
Ga0334995_0103792_459_689	3300034062	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSTWDSIGCLTVTSAADPDEWMAWDLPSDLDLKGMELEELLNVPVGEG
Ga0334995_0120623_1640_1891	3300034062	Freshwater	VRKCPALVKRAADSFWFTSREVPWLRWWQELILSWVSTWETVGELTVTSAADPDEWMAWDLPTDLDLKRLELEELLDVPVGEG
Ga0334995_0123002_1199_1417	3300034062	Freshwater	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGCLTVTSAAGPDEWMAWDLPSDLDLKRLELEELLESQ
Ga0334995_0136870_825_1055	3300034062	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWETVGCLTVVSAADPDEFAAWDLPTDLDLQRMELEELLDVPVGEG
Ga0334995_0236933_195_425	3300034062	Freshwater	VKRSATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPEEFAAWDLPTDLELQRMELEELLAVGEDDG
Ga0334995_0416127_2_217	3300034062	Freshwater	VKRAATPWHLLDCSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDTFAAWDLPSDLDLQRLELEEAFHR
Ga0335000_0425157_251_469	3300034063	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWDTVGCLTVTSAADPDEWMAWDLPSDLDLKRMELEELLESQ
Ga0335028_0288560_1_204	3300034071	Freshwater	LLDRSTPWLAWWQELILNWVSSWHTIGCLTVTSAADPDEWTAWDLPNDVDLQRMEQEELQAVGEDEG
Ga0310127_060368_821_1048	3300034072	Fracking Water	MKRASSLALLLSRDTPWLSWWQELILNWASSWSNVGDLTVTSADREHYTAWELPSDLDLQRMQLEELLSAPESRG
Ga0310130_0001323_10015_10227	3300034073	Fracking Water	VKRAATPWHLLDRSTPWLSWWQELILNWVSSWETVGCLSVTSAADPEEFTTWDLPTDLELTRMELEELLQ
Ga0310130_0005192_4150_4377	3300034073	Fracking Water	MKRASSLALLLSRDTPWLSWWQELILNWVSTWSTVGDLTVTSADREHYTAWELPSDLDLQRMQLEELLGAPESRG
Ga0310130_0008047_1020_1241	3300034073	Fracking Water	MKRASSLALLLSRDTPWLRWWQELILNWASSWSTVGDLTVTSADREHYTAWELPSDLDLQRMQLEELLSAPSD
Ga0310130_0032884_778_1005	3300034073	Fracking Water	MKRASSLALLLSRDTPWLSWWQELILNWASSWSTVGDLTVTSADREHYTAWELPSDLDLQRMQLEELLSAPESRG
Ga0310130_0241609_2_217	3300034073	Fracking Water	MKRASSLALLLSRDTPWLSWWQELILNWASSWSTVGDLTVTSADREHYTAWELPSDLDLQRMQLEELLSAPS
Ga0335010_0104465_1370_1594	3300034092	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSGWETIGCLTVTSAADPEEFADWDLPSDLELTRLELEELLTVGEG
Ga0335010_0266021_314_544	3300034092	Freshwater	VKRAATPWHLLDRSTPWLAWWQEPILDWVSSWETVGCLTVTSAANPDEWMAWDLPSDLDLKRLELEELLDVPVGEG
Ga0335027_0008229_8033_8251	3300034101	Freshwater	MKRAASPSHLLSRDVTWLDWWQELILNWVSSWDTVGCLTVTSAADPDEWMAWDLPSDLDLKRMELEELLESR
Ga0335027_0030260_3253_3471	3300034101	Freshwater	VKRAASPSHLLSRDVSWLAWWQELILNWVSSWETVGCLTVTSAADPDEWMAWDLPSDLDLKRMELEKLLESQ
Ga0335027_0064246_1821_2051	3300034101	Freshwater	VKRAASPSHLISRDVPWLAWWQELILNWVSSWETVGTITVTSAADPDEWMAWDLPSDLDLKRLELEELLDVPVGEG
Ga0335027_0097330_862_1080	3300034101	Freshwater	VKRAASPSHLLSRDVTWLAWWQELILNWVSSWDTVGCLTVTSAADPDEWMAWDLPSDLELKRQELEELLESQ
Ga0335027_0116113_1014_1229	3300034101	Freshwater	MKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGCLTVTSAADPDEWMAWDLPTDLDLKRMKLEELLES
Ga0335027_0194283_862_1092	3300034101	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDSIGCLSVVSAADPDEFAAWDLPSDLELQRMELEELLAVGEDNG
Ga0335027_0218005_290_520	3300034101	Freshwater	VKRAATPWHLLDRSTPWLTWWQELILNWVSSWETVGCLTVVSAADPDEFAAWDLPTDLDLQRMELEELLEATAGEG
Ga0335030_0468622_246_461	3300034103	Freshwater	VKRAASPSHLLSRDVTWLAWWQELILNWVSSWETVGCLTVTSAADPDEWMAWDLPTDLDLKRMKLEELLES
Ga0335031_0228403_182_412	3300034104	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWNSIGCLTVVSAADPDEFAAWDLPSDLELQRMELKELLDVPVGEG
Ga0335051_0410576_176_391	3300034109	Freshwater	MKRAASPSHLLSRDVSWLAWWQELILNWVSSWETVGTITVSSAADPDEWMAWDLPTDLDLKRMKLEELLES
Ga0335066_0043365_1235_1465	3300034112	Freshwater	VKRAATPWHLLDRSTPWLAWWQELILNWVSSWDAVGCLTVTSAADPDEWTAWDLPADLDLQRMELEELLAVGEDDG
Ga0335066_0166470_282_500	3300034112	Freshwater	MKRAASPSHLLSRDVSWLAWWQELILNWVSNWETVGTITVSSAAAPDEWMAWDLPTDLDLVRLELEELLDSR
Ga0335053_0246441_92_316	3300034118	Freshwater	VKRAATPWHLLDRSTPWLTWWQELILNWVSGWETIGCLTVTSAADPEEFAAWDLPSDLELTRMELEELLAAPES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences