Metagenome / Metatranscriptome Family F095428

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095428
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	70 residues
Representative Sequence	ASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Number of Associated Samples	97
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (15.238 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.63% β-sheet: 4.30% Coil/Unstructured: 58.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02771	Acyl-CoA_dh_N	64.76
PF08028	Acyl-CoA_dh_2	3.81
PF09347	DUF1989	1.90
PF13520	AA_permease_2	1.90
PF01645	Glu_synthase	0.95
PF12867	DinB_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	68.57
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.95
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.19 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.19 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	68.57 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	38.10 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	13.33 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.10 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	13.33 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.10 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2.86 %
Unclassified	root	N/A	1.90 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.10 %
Unclassified	root	N/A	1.90 %
Pseudonocardia spinosispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	0.95 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01EJLMY	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
2199352033\|2206984438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300000881\|JGI10215J12807_1009421	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300000890\|JGI11643J12802_11459602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	741	Open in IMG/M
3300004156\|Ga0062589_100650866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300004479\|Ga0062595_102052376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300004480\|Ga0062592_100611029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	929	Open in IMG/M
3300005294\|Ga0065705_10051606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300005294\|Ga0065705_10595551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300005331\|Ga0070670_102100033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	521	Open in IMG/M
3300005341\|Ga0070691_10454778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300005353\|Ga0070669_101972711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	510	Open in IMG/M
3300005438\|Ga0070701_10769407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	654	Open in IMG/M
3300005440\|Ga0070705_101819290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	517	Open in IMG/M
3300005444\|Ga0070694_101353675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300005471\|Ga0070698_100875079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300005546\|Ga0070696_100696276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300005549\|Ga0070704_101376493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300005577\|Ga0068857_100887079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300005719\|Ga0068861_100391618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1231	Open in IMG/M
3300005843\|Ga0068860_101538374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300006049\|Ga0075417_10350045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300006604\|Ga0074060_11885140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300006846\|Ga0075430_101517442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300006846\|Ga0075430_101564512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	541	Open in IMG/M
3300006847\|Ga0075431_101355217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300006904\|Ga0075424_100294053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1729	Open in IMG/M
3300006918\|Ga0079216_10815333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	688	Open in IMG/M
3300006969\|Ga0075419_11042388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	597	Open in IMG/M
3300007004\|Ga0079218_13847673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	510	Open in IMG/M
3300009090\|Ga0099827_11797170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300009100\|Ga0075418_12158378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300009147\|Ga0114129_11835381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300009162\|Ga0075423_12734952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009553\|Ga0105249_13174624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300009816\|Ga0105076_1133058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300009817\|Ga0105062_1104466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300009818\|Ga0105072_1028611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1030	Open in IMG/M
3300009822\|Ga0105066_1018562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300009823\|Ga0105078_1053875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009837\|Ga0105058_1110993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300010047\|Ga0126382_11648723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300010362\|Ga0126377_11453332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300010400\|Ga0134122_12631137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300010403\|Ga0134123_10014533	All Organisms → cellular organisms → Bacteria	5449	Open in IMG/M
3300012093\|Ga0136632_10000662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	10524	Open in IMG/M
3300012532\|Ga0137373_10057633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	3574	Open in IMG/M
3300012681\|Ga0136613_10023322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3539	Open in IMG/M
3300012939\|Ga0162650_100007411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300014325\|Ga0163163_12697163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300014745\|Ga0157377_10459392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300015372\|Ga0132256_101365708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300017965\|Ga0190266_11314994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300017997\|Ga0184610_1025291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1630	Open in IMG/M
3300018028\|Ga0184608_10206204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300018028\|Ga0184608_10400408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300018031\|Ga0184634_10199626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300018031\|Ga0184634_10351485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300018053\|Ga0184626_10423999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300018054\|Ga0184621_10286452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300018056\|Ga0184623_10369435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300018073\|Ga0184624_10258093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300018074\|Ga0184640_10321336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300018075\|Ga0184632_10395786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300018076\|Ga0184609_10554822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300018078\|Ga0184612_10440800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300018079\|Ga0184627_10460334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300018082\|Ga0184639_10281295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300018083\|Ga0184628_10181580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300018920\|Ga0190273_10538214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300019255\|Ga0184643_1416492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300019767\|Ga0190267_11309042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300020003\|Ga0193739_1037596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300020005\|Ga0193697_1007220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2709	Open in IMG/M
3300021510\|Ga0222621_1055754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300022756\|Ga0222622_10589024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300022756\|Ga0222622_10833890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300025923\|Ga0207681_11834446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300026088\|Ga0207641_10864508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300026089\|Ga0207648_11583756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300027006\|Ga0209896_1003948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1478	Open in IMG/M
3300027379\|Ga0209842_1066499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300027543\|Ga0209999_1127346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300027695\|Ga0209966_1167191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300027722\|Ga0209819_10035856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1683	Open in IMG/M
3300027909\|Ga0209382_10449162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1428	Open in IMG/M
3300027909\|Ga0209382_10515340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1315	Open in IMG/M
3300027909\|Ga0209382_10748385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300028381\|Ga0268264_12179022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300028589\|Ga0247818_10745834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300028705\|Ga0307276_10116698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300028784\|Ga0307282_10214593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300028807\|Ga0307305_10200280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300028819\|Ga0307296_10773728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300028824\|Ga0307310_10243089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300028824\|Ga0307310_10370308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300028872\|Ga0307314_10243279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300031199\|Ga0307495_10202369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031226\|Ga0307497_10200645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300031847\|Ga0310907_10496322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300032003\|Ga0310897_10424584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300032180\|Ga0307471_100534814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1324	Open in IMG/M
3300032205\|Ga0307472_101991354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.29%
Host-Associated	Host-Associated	25.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.38%
Plants	Host-Associated → Plants	25.71%
Aquatic	Environmental → Aquatic	21.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.48%
Sediment	Environmental → Aquatic → Sediment	18.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.62%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.33%
Sand	Environmental → Terrestrial → Soil → Sand	7.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.62%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Ice	Environmental → Aquatic → Freshwater → Ice	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.43%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.86%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.95%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2199352033	Cave microbial community (Wet rock wall)	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_01559960	2067725002	Soil	VYGIWDQALASYLGFYEFTGLPLYLGLGVLVASVLLYFYRRVVQDKAKITFRDRNVPTMPNEEQMKLLQEESVSV
2208764891	2199352033	Speleothem And Rock Wall Surfaces	QGELAAFVGFYEFSGIPFYIGVGILILSVLLFFYRRAVEDKAKITFRDTNVPTMPNEAQMALLREESTSG
JGI10215J12807_10094211	3300000881	Soil	LVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
JGI11643J12802_114596022	3300000890	Soil	SQQDLAAYVGFYEFTGFPFFVGVGILLLSVLLFFYRRAVQDRAKITFRDRDVPVMPTAEQMELLQEESVPG*
Ga0062589_1006508662	3300004156	Soil	SYIGFYEFKGLPLFLGAGVLIASVALFFYRRAVQDRAKITFRDRDVPTMPSEEQMLLLQEEVVPG*
Ga0062595_1020523761	3300004479	Soil	GISATLGGYSASGYPFYIGVGVLVASVLLFFYRRAVEDKAKITFRDADVPTMPNEQQMALLREETIPG*
Ga0062592_1006110292	3300004480	Soil	FLGAGVLIASVALFFYRRAVQDRAKITFRDRDVPTMPSEEQMLLLQEEVVPG*
Ga0065705_100516062	3300005294	Switchgrass Rhizosphere	LVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNAEQMALLREESMA*
Ga0065705_105955512	3300005294	Switchgrass Rhizosphere	NLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVIAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0070670_1021000332	3300005331	Switchgrass Rhizosphere	DQDLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDKSRITFRDRDVTTMPNEEQMALLREESLA*
Ga0070691_104547781	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VLALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDQDVPTMPNEEQMALLREESIA*
Ga0070669_1019727112	3300005353	Switchgrass Rhizosphere	SYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESMA*
Ga0070701_107694072	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0070705_1018192901	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	QKVASYIGFYEFKGLPLFLGAGVLVASVALFFYRRAVQDKAKITFRDRDVAAMPNEEQMALLREENTAV*
Ga0070694_1013536752	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DQDLAAYIGFYEFTGLPLFLGLGVLIASVLLYFYRRVVQDRAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0070698_1008750791	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QDLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDKSRITFRDRDVPTMPNEEQMALLREESIA*
Ga0070696_1006962762	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LVLSGVLDQKVASYIGFYEFKGLPLYLGLGVLVASVLLFFYRRAVQDKAKITFKDLDVPTMPSEEQMALLREETISS*
Ga0070704_1013764932	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EFKGLPLFLGAGVLVASVALFFYRRAVQDKAKITFRDRDVAAMPNEEQMALLREENTAV*
Ga0068857_1008870792	3300005577	Corn Rhizosphere	YDQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESMA*
Ga0068861_1003916181	3300005719	Switchgrass Rhizosphere	LALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0068860_1015383741	3300005843	Switchgrass Rhizosphere	LILVLEGVLDQDLAAYIGFYEFTGLPLFLGLGVLIASVLLYFYRRVVQDRAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0075417_103500451	3300006049	Populus Rhizosphere	FTGLPLYLGLGVLVASVLLFFYRRAVQDKAKITFRDANVPTMPNEEQMKLLQEESVSA*
Ga0074060_118851401	3300006604	Soil	ILVLDGVIDQKVASYIGFYEFKGLPLFLGLGVLVAAVLLYFYRRAVQDKAKITFRDRDVPLVPNAEQMKLLHEEEVPA*
Ga0075430_1015174422	3300006846	Populus Rhizosphere	LPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0075430_1015645122	3300006846	Populus Rhizosphere	LPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0075431_1013552172	3300006847	Populus Rhizosphere	VTQPDIAALLGGYTFSGAPLWIGLGVLVVSVLLFFYRRAVQDKAKITFRDTNVSVMPTAEQMELLREEAVPS*
Ga0075424_1002940532	3300006904	Populus Rhizosphere	ASYLGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDRAKITFRDRDVPTMPNADQMELLREETVPG*
Ga0079216_108153332	3300006918	Agricultural Soil	ASYIGFYEFKGLPLFLGAGVLIASVGLFFYRRAVQDRKPITFRDPDVPTMPSEDQMRLLREEVMPDRSS*
Ga0075419_110423882	3300006969	Populus Rhizosphere	LVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0079218_138476732	3300007004	Agricultural Soil	FTGWPLAIGVGVLVASVVLFFYRRIVQDRKPLTFRDLDVPTVPSEDQMRLLREEVMPDRSS*
Ga0099827_117971702	3300009090	Vadose Zone Soil	LLVIWGVTQQKLAAFVGFYQFTGFPFAVGFGILVLSVLLFFYRRAVQDKKKITFRDENVPDMPNEQQMALLREESMPS*
Ga0075418_121583781	3300009100	Populus Rhizosphere	KLGPAWMPIAFILALYNLILVIWGVTQQDLAAYVGFYEFTGFPLFVGVGVLVVSVLLFFYRRAVQDKAKITFKDKDVAVVPTVEQMELLQEESVPS*
Ga0114129_118353811	3300009147	Populus Rhizosphere	GVLVASVLLFFYRRAVQDKAKITFRDRNVPTMPNEEQMKLLQEESVSA*
Ga0075423_127349522	3300009162	Populus Rhizosphere	GLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0105249_131746242	3300009553	Switchgrass Rhizosphere	EFTGLPLYLGIGVLVASVLLYFYRRVVQDKAKITFRDRDVPVMPNEEQMKLLQEENVPG*
Ga0105076_11330581	3300009816	Groundwater Sand	PLYLGLGVLVMSVLLYFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESVSA*
Ga0105062_11044662	3300009817	Groundwater Sand	VLEGLFDQDLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0105072_10286111	3300009818	Groundwater Sand	PIAGLLALFNLVLVIYGVSQQDLAAYVGFYEFTGFPFFVGVGILLLSVLLFFYRRAVQDRAKITFRDRDVPVMPTTEQMELLQEESVPG*
Ga0105066_10185621	3300009822	Groundwater Sand	YLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESVSA*
Ga0105078_10538752	3300009823	Groundwater Sand	LYLGLGVLVASVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESVSA*
Ga0105058_11109932	3300009837	Groundwater Sand	DLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0126382_116487232	3300010047	Tropical Forest Soil	FLGLGVLVAAVLLFFYRRLVQDKAKITFRDRDVPTMPNAEQMELLREETVPG*
Ga0126377_114533322	3300010362	Tropical Forest Soil	LGFYEFTGLPLFLGLGVLLASVLLYFYRRAVQDKAKITFRDRNVPTMPNAEQMKLLQEESVPA*
Ga0134122_126311372	3300010400	Terrestrial Soil	LFNLILVLDGVIDQKVASYIGFYEFKGLPLFLGVGVLVAAVLLYFYRRAVQDKAKITFRDRDVPIVPNAEQMALLHEEEVPA*
Ga0134123_100145331	3300010403	Terrestrial Soil	LPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS*
Ga0136632_100006629	3300012093	Polar Desert Sand	GILVLSVLLFFYRRGVEDKQPITFRDHNVPSMPDEHQRALLQETSRPG*
Ga0137373_100576333	3300012532	Vadose Zone Soil	YVGFYEFTGFPFFVGVGILVMSVLLFFYRRAVQDRAKITFRDRDVPVMPTSEQMELLREESVAG*
Ga0136613_100233223	3300012681	Polar Desert Sand	GVGVLVLSVLLFFYRRGVEDKQPITFRDHNVPTMPDEHQRALLQETSRPG*
Ga0162650_1000074111	3300012939	Soil	FNLILVLEGIFDQDLAAYIGFYEFTGLPLFLGLGVLVAYVLLFFYRRVVQDQSKITFRDRDVPTMPNAEQMALLREESIA*
Ga0163163_126971632	3300014325	Switchgrass Rhizosphere	GLPLFLGLGVLVASVLLFFYRRVVQDKSRITFRDRDVTTMPNEEQMALLREESLA*
Ga0157377_104593922	3300014745	Miscanthus Rhizosphere	GIYDQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA*
Ga0132256_1013657081	3300015372	Arabidopsis Rhizosphere	LPLFLGLGVLVASVLLYFYRRVGQDKAKITFRDRDVPTMPNAEQMELVKEESVSA*
Ga0190266_113149942	3300017965	Soil	LVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVLSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESMA
Ga0187777_109581531	3300017974	Tropical Peatland	ANFVFLLYGVFDGTLAALFGGYTFSGWPLFIGLGVLVAAIVLYIYRRVVQDKTRVTFRDKDVPTMPNEEQMRLLQEEMQPA
Ga0184610_10252911	3300017997	Groundwater Sediment	IGGYDFSGPFYIGVGVLVVSVLLFFYRRAVEDKKPITFRDRDVPTVPSEDELRMLREEVMPDRSS
Ga0184608_102062042	3300018028	Groundwater Sediment	ASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0184608_104004082	3300018028	Groundwater Sediment	LVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRAVQDKAKITFRDRDVPTMPNEQQMALLREESMA
Ga0184634_101996261	3300018031	Groundwater Sediment	LVLVLEGVFDQDLAAYIGFYEFTGLPLFLGLGVLVASVLLYFYRRAVQDKARITFRDRDVPTMPNEAQMALLREESRA
Ga0184634_103514852	3300018031	Groundwater Sediment	LFLVIFGVTQSGVAAEVGFYEFAGAPLLIGLGVLVASVLLFFYRRVVEDKAKITFRDTDVALMPNEEQMALLREETRAG
Ga0184626_104239991	3300018053	Groundwater Sediment	TGFPLYVGLGILVLSVLLFFYRRAVQDRAKITFRDRDVAIMPNAEQMELLREETVPS
Ga0184621_102864521	3300018054	Groundwater Sediment	PIKVGPVLTASAWVLAAFNLILVIDGVLDQKVASYIGFYEFTGLPLYLGIGVLVAAVLLYFYRRAVQDKAKITFRDRNVPTMPNEQQMALLREESTAV
Ga0184623_103694352	3300018056	Groundwater Sediment	GGYQFTGFPFYVGVGVLVVSVLLFFYRRAVEDKAKITFRDRDVAIMPNEQQMALLREETRIG
Ga0184624_102580932	3300018073	Groundwater Sediment	TGLPLFLGLGVLVASVLMYFYRRVVQDKAKITFRDRDVPTMPNEAQMALLREESRA
Ga0184640_103213361	3300018074	Groundwater Sediment	EFSGIPFYIGVGILVLSVLLFFYRRAVEDKAKITFRDANVPTMPNEAQMALLREETSSV
Ga0184632_103957862	3300018075	Groundwater Sediment	LALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRGVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0184609_105548222	3300018076	Groundwater Sediment	LALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEQQMALLREESMA
Ga0184612_104408002	3300018078	Groundwater Sediment	LVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKARITFRDRDVPTMPNEAQMALLREESRA
Ga0184627_104603341	3300018079	Groundwater Sediment	ELAAYVGFYEFTGFPFSVGIGVLILSVLLFFYRRAVEDKAKITFRDKDVALMPNEEQMALLREETRHG
Ga0184639_102812951	3300018082	Groundwater Sediment	TAGPFYIGVGVLVVSVLLFFYRRAVEDKAKITFRDANVPTMPNAEQMAMLQTETAK
Ga0184628_101815802	3300018083	Groundwater Sediment	ILALFNLVLVVYGIYDQALASYLGFYEFTGLPLYLGIGVLVMAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0190273_105382142	3300018920	Soil	LAAFNLILVLAGVIDQKVASYIGFYEFKGLPLFLGAGVLIASVGLFFYRRAVQDKKPITFRDPDVPTMPNEEQMRLLREEVMPDRP
Ga0184643_14164921	3300019255	Groundwater Sediment	LAAFNFVLVLAGVLDQKVASYIGFYEFKGLPLFLGGGVLVASVLLFFYRRAVQDRAKITFRDRDVPTMPNEQQMALLQEESTAV
Ga0190267_113090422	3300019767	Soil	VGFYEFAGAPLWIGLGVLVASVLLFFYRRAVQDKKPITFRDLDVPTVPTEDQMRLLREEVMPDRS
Ga0193739_10375962	3300020003	Soil	AAYLGFYEFTGLPLYLGLGVLVMSVLLYFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESVSA
Ga0193697_10072203	3300020005	Soil	YLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0222621_10557541	3300021510	Groundwater Sediment	DQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKARITFRDRDVPTMPNEAQMALLREESRA
Ga0222622_105890242	3300022756	Groundwater Sediment	NLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0222622_108338902	3300022756	Groundwater Sediment	YEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0207681_118344462	3300025923	Switchgrass Rhizosphere	AAVLALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0207641_108645081	3300026088	Switchgrass Rhizosphere	CALQLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVLSVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESMA
Ga0207648_115837562	3300026089	Miscanthus Rhizosphere	QALASYLGFYDFTGLPLYLWIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0209896_10039482	3300027006	Groundwater Sand	VLEGLFDQDLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRAVQDRAKITLRDRNVPTMPNEEQMKLLREESMA
Ga0209842_10664992	3300027379	Groundwater Sand	QDLAAYIGFYEFTGLPLFLGLGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS
Ga0209999_11273461	3300027543	Arabidopsis Thaliana Rhizosphere	AFNLILVLAGVFDQKVASYIGFYEFKGLPLFLGAGVLIASVALFFYRRAVQDRAKITFRDRDVPTMPSEEQMLLLQEEVVPG
Ga0209966_11671911	3300027695	Arabidopsis Thaliana Rhizosphere	LPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEKQMALLREESIA
Ga0209819_100358562	3300027722	Freshwater Sediment	GVLALFNLILVLEGIFDQDLAAYIGFYEFTGLPLYLGLGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS
Ga0209382_104491621	3300027909	Populus Rhizosphere	YLGIGVLVLSVLLYFYRRVVQDKQPITFRDADAPTTPTAEQLALLQAEGATP
Ga0209382_105153402	3300027909	Populus Rhizosphere	ALLGGYTFSGAPLWIGLGVLVVSVLLFFYRRAVQDKAKITFRDTNVSVMPTAEQMELLREEAVPS
Ga0209382_107483852	3300027909	Populus Rhizosphere	YEFTGLPLFLGLGVLVASVLLFFYRRVVQDRAKITFRDRDVPTMPNADQMELLREETVPG
Ga0268264_121790221	3300028381	Switchgrass Rhizosphere	TGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNAEQMRLLQEEVVPS
Ga0247818_107458342	3300028589	Soil	YLGIGVLVIAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0307276_101166982	3300028705	Soil	IKVGPVLTASAWLLATFNFVLVLAGVLDQKVASYIGFYEFKGLPLFLGGGVLLASVLLFFYRRAVQDKKPITFRDPDVPVVPTEDQMRLLREEVMPDRP
Ga0307282_102145932	3300028784	Soil	GLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNAEQMALLREESMA
Ga0307305_102002802	3300028807	Soil	LVIYGVYDQALASYLGFYEFTGLPLYLGIGVLVASVLLFFYRRVVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0307296_107737281	3300028819	Soil	VGPGLTAAAAILAVFNLILVLDGVLDQKVASYIGFYEFKGLPLYLGVGVLVASVLLFFYRRAVQDKAKITFRDMNVALVPNEEQMKLLREEEVSV
Ga0307310_102430892	3300028824	Soil	RPIKVGPVLTASAWLLAAFNFVLVVAGVLDQKVASYIGFYEFKGLPLFLGAGVLVTSVLLFFYRRAVQDKAKITFRDRDVPSMPNEQQMALLREESTAV
Ga0307310_103703082	3300028824	Soil	LPLFLGLGVLVAAVLLYFYRRVVQDRAKITFRDRDVPTMPNEEQMALLREESIA
Ga0307314_102432791	3300028872	Soil	VLTASAWLLAAFNFVLVVAGVLDQKVASYIGFYEFKGLPLFLGAGVLVTSVLLFFYRRAVQDKAKITFRDRDVPSMPNEQQMALLREESTAV
Ga0307495_102023692	3300031199	Soil	LVLVVYGIYDQALASYLGFYEFTGLPLYLGIGVLVAAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0307497_102006452	3300031226	Soil	EFTGLPLYLGIGVLVAAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESLA
Ga0308194_101917872	3300031421	Soil	RPIKVGPAWVGIAALLALVNFVLLIYGVSQSDLAALFGGYTFSGWPLYLGIGVLVTAVLLYFYRRAVQDKIPITFRDKDAPTMPNAEQMALLREEAAPAP
Ga0310907_104963222	3300031847	Soil	LGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESMA
Ga0310897_104245841	3300032003	Soil	YLGFYEFTGLPLYLGIGVLVVSVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA
Ga0307471_1005348142	3300032180	Hardwood Forest Soil	AGVLALFNLVLVVYGVYDQALASYLGFYEFTGLPLYLGIGVLVVAVLLYFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESLA
Ga0307472_1019913542	3300032205	Hardwood Forest Soil	GLPLYLGIGVLVASVLLFFYRRAVQDKAKITFRDRDVPTMPNEEQMALLREESIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences