NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095448

Metagenome / Metatranscriptome Family F095448

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095448
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 68 residues
Representative Sequence MVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Number of Associated Samples 94
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.62 %
% of genes near scaffold ends (potentially truncated) 43.81 %
% of genes from short scaffolds (< 2000 bps) 83.81 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.857 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(14.286 % of family members)
Environment Ontology (ENVO) Unclassified
(26.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.429 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 30.43%    Coil/Unstructured: 69.57%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF06199Phage_tail_2 45.71
PF11836Phage_TAC_11 29.52
PF09550Phage_TAC_6 6.67
PF11367DUF3168 3.81
PF00072Response_reg 1.90
PF01053Cys_Met_Meta_PP 1.90
PF09931DUF2163 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.90
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.90
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.90
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 1.90
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 1.90
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 1.90
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.90
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 1.90
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 1.90
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 1.90
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.86 %
UnclassifiedrootN/A37.14 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0831052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales728Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105553045Not Available1308Open in IMG/M
3300001976|JGI24752J21851_1008838Not Available1314Open in IMG/M
3300002076|JGI24749J21850_1064292All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300003349|JGI26129J50193_1015680Not Available558Open in IMG/M
3300003911|JGI25405J52794_10028972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1145Open in IMG/M
3300004114|Ga0062593_101048071All Organisms → cellular organisms → Bacteria → Proteobacteria841Open in IMG/M
3300004156|Ga0062589_100023854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2969Open in IMG/M
3300004156|Ga0062589_100769487All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300004157|Ga0062590_101850208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria621Open in IMG/M
3300004643|Ga0062591_100269096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris1316Open in IMG/M
3300004643|Ga0062591_100572363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae991Open in IMG/M
3300004643|Ga0062591_101555708All Organisms → cellular organisms → Bacteria → Proteobacteria664Open in IMG/M
3300005093|Ga0062594_100175535Not Available1451Open in IMG/M
3300005162|Ga0066814_10000716All Organisms → cellular organisms → Bacteria → Proteobacteria2267Open in IMG/M
3300005164|Ga0066815_10042938All Organisms → cellular organisms → Bacteria → Proteobacteria723Open in IMG/M
3300005276|Ga0065717_1008901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae670Open in IMG/M
3300005293|Ga0065715_10653048Not Available672Open in IMG/M
3300005329|Ga0070683_101474687All Organisms → cellular organisms → Bacteria → Proteobacteria654Open in IMG/M
3300005332|Ga0066388_101988214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1041Open in IMG/M
3300005332|Ga0066388_105371126Not Available650Open in IMG/M
3300005340|Ga0070689_100433387Not Available1116Open in IMG/M
3300005440|Ga0070705_101226830All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300005459|Ga0068867_100022293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4527Open in IMG/M
3300005526|Ga0073909_10143360Not Available989Open in IMG/M
3300005530|Ga0070679_101321688Not Available667Open in IMG/M
3300005545|Ga0070695_100078476All Organisms → cellular organisms → Bacteria2177Open in IMG/M
3300005564|Ga0070664_100512733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1106Open in IMG/M
3300005713|Ga0066905_100350463All Organisms → cellular organisms → Bacteria → Proteobacteria1179Open in IMG/M
3300005718|Ga0068866_10363035Not Available924Open in IMG/M
3300005764|Ga0066903_104911253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria710Open in IMG/M
3300005842|Ga0068858_100031468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4928Open in IMG/M
3300006572|Ga0074051_11125448Not Available540Open in IMG/M
3300006576|Ga0074047_10022245All Organisms → cellular organisms → Bacteria → Proteobacteria938Open in IMG/M
3300006580|Ga0074049_12988898All Organisms → cellular organisms → Bacteria → Proteobacteria670Open in IMG/M
3300006605|Ga0074057_12029464Not Available737Open in IMG/M
3300006755|Ga0079222_11382975Not Available650Open in IMG/M
3300006806|Ga0079220_10306186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae985Open in IMG/M
3300006871|Ga0075434_100974874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae862Open in IMG/M
3300006954|Ga0079219_12222136Not Available529Open in IMG/M
3300009094|Ga0111539_10034556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6129Open in IMG/M
3300009100|Ga0075418_12100531Not Available616Open in IMG/M
3300010362|Ga0126377_10006146All Organisms → cellular organisms → Bacteria → Proteobacteria8992Open in IMG/M
3300010371|Ga0134125_10987393Not Available923Open in IMG/M
3300010371|Ga0134125_12488353All Organisms → cellular organisms → Bacteria → Proteobacteria563Open in IMG/M
3300010373|Ga0134128_12438785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria576Open in IMG/M
3300010396|Ga0134126_11250373Not Available824Open in IMG/M
3300012474|Ga0157356_1025528All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli513Open in IMG/M
3300012480|Ga0157346_1022573All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli561Open in IMG/M
3300012491|Ga0157329_1000952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1342Open in IMG/M
3300012494|Ga0157341_1036555All Organisms → cellular organisms → Bacteria → Proteobacteria553Open in IMG/M
3300012885|Ga0157287_1115474All Organisms → cellular organisms → Bacteria → Proteobacteria516Open in IMG/M
3300012893|Ga0157284_10003057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2700Open in IMG/M
3300012903|Ga0157289_10080888Not Available892Open in IMG/M
3300012903|Ga0157289_10148632All Organisms → cellular organisms → Bacteria → Proteobacteria721Open in IMG/M
3300013100|Ga0157373_10536660Not Available847Open in IMG/M
3300013306|Ga0163162_11003350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales944Open in IMG/M
3300014497|Ga0182008_10156470All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1145Open in IMG/M
3300015371|Ga0132258_10135082All Organisms → cellular organisms → Bacteria → Proteobacteria5889Open in IMG/M
3300015371|Ga0132258_11562402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1666Open in IMG/M
3300015372|Ga0132256_101821168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales717Open in IMG/M
3300015374|Ga0132255_100204662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2793Open in IMG/M
3300015374|Ga0132255_102912448Not Available731Open in IMG/M
3300019356|Ga0173481_10000450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8771Open in IMG/M
3300019356|Ga0173481_10001014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6530Open in IMG/M
3300019361|Ga0173482_10000091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales12759Open in IMG/M
3300020081|Ga0206354_10245550All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales679Open in IMG/M
3300022889|Ga0247785_1000255All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4610Open in IMG/M
3300023057|Ga0247797_1028866Not Available744Open in IMG/M
3300023057|Ga0247797_1030044All Organisms → cellular organisms → Bacteria → Proteobacteria733Open in IMG/M
3300023270|Ga0247784_1139752All Organisms → cellular organisms → Bacteria → Proteobacteria628Open in IMG/M
3300025735|Ga0207713_1079203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1187Open in IMG/M
3300025912|Ga0207707_10093794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2622Open in IMG/M
3300025917|Ga0207660_11319911Not Available586Open in IMG/M
3300026089|Ga0207648_10241783Not Available1607Open in IMG/M
3300026792|Ga0207499_102517Not Available612Open in IMG/M
3300026933|Ga0207578_1000768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1625Open in IMG/M
3300026940|Ga0207521_102055Not Available710Open in IMG/M
3300026995|Ga0208761_1003643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1095Open in IMG/M
3300027401|Ga0208637_1020461All Organisms → cellular organisms → Bacteria → Proteobacteria724Open in IMG/M
3300027440|Ga0207571_100766Not Available714Open in IMG/M
3300027445|Ga0207554_101560Not Available749Open in IMG/M
3300027471|Ga0209995_1068402Not Available607Open in IMG/M
3300027472|Ga0207449_101341All Organisms → cellular organisms → Bacteria → Proteobacteria645Open in IMG/M
3300027479|Ga0207636_1003112All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300027560|Ga0207981_1011243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1597Open in IMG/M
3300027617|Ga0210002_1008609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1554Open in IMG/M
3300027717|Ga0209998_10003271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3568Open in IMG/M
3300027725|Ga0209178_1413057Not Available514Open in IMG/M
3300027992|Ga0247750_1036362Not Available544Open in IMG/M
3300028597|Ga0247820_10237130Not Available1174Open in IMG/M
3300028608|Ga0247819_10428645All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
(restricted) 3300031150|Ga0255311_1014024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1623Open in IMG/M
3300031562|Ga0310886_11137602Not Available505Open in IMG/M
3300031716|Ga0310813_10021398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4422Open in IMG/M
3300031720|Ga0307469_10889864Not Available824Open in IMG/M
3300031820|Ga0307473_10810933Not Available668Open in IMG/M
3300031847|Ga0310907_10636811Not Available584Open in IMG/M
3300031854|Ga0310904_10836810Not Available646Open in IMG/M
3300031913|Ga0310891_10014969All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300031944|Ga0310884_10076160Not Available1583Open in IMG/M
3300032122|Ga0310895_10223005Not Available858Open in IMG/M
3300032144|Ga0315910_10180394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1580Open in IMG/M
3300032174|Ga0307470_11432889Not Available571Open in IMG/M
3300032174|Ga0307470_11900762All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil14.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.90%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.95%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.95%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.95%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.95%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001976Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7Host-AssociatedOpen in IMG/M
3300002076Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3Host-AssociatedOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012474Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610EnvironmentalOpen in IMG/M
3300012480Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610Host-AssociatedOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022889Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300023270Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5EnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026792Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026933Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026940Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026995Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)EnvironmentalOpen in IMG/M
3300027401Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)EnvironmentalOpen in IMG/M
3300027440Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027445Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K3-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027471Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027472Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK07-D (SPAdes)EnvironmentalOpen in IMG/M
3300027479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027992Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_083105222228664021SoilMVASTLTNQPDPAIPNIVCPKCGLRMQVAAIGPVGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
INPhiseqgaiiFebDRAFT_10555304553300000364SoilMVASTLTHQPDPAIPNIACPKCGQRMQVAAIEPAGDDRTVTFGCDCGHLYDLSERAIVALARDSPDRW*
JGI24752J21851_100883813300001976Corn, Switchgrass And Miscanthus RhizosphereFVMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
JGI24749J21850_106429223300002076Corn, Switchgrass And Miscanthus RhizosphereMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALA
JGI26129J50193_101568023300003349Arabidopsis Thaliana RhizosphereMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
JGI25405J52794_1002897213300003911Tabebuia Heterophylla RhizosphereMVASTRTHQPDPAIPNIVCPKCGQRMQVAAIEPAGGNDRTVTFGCDCGHRYDLSERAIVALARDNSDRW*
Ga0062593_10104807113300004114SoilMVASTLTHQPDPAIPNIACPKCGLRMHVAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062589_10002385423300004156SoilMVASTHTRQFDPAIPNVVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062589_10076948713300004156SoilMVASTHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCSCGNRYELSERAIVALARDSSDRW*
Ga0062590_10185020813300004157SoilPNIVCPKCGLRMQVAAIEPAGNNDRMVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062591_10026909633300004643SoilMVASTLTHQSDPAIPNIACPKCGLRMQVAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062591_10057236313300004643SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062591_10155570813300004643SoilMVASTHTRQFDPAIPNIVCPKCGLRMQVAAIEPAGNNDRMVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0062594_10017553543300005093SoilNIERSLVMVASTHTRQFDPAIPNVVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0066814_1000071623300005162SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0066815_1004293813300005164SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSEQAIVALARDSSDRW*
Ga0065717_100890123300005276Arabidopsis RhizosphereMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0065715_1065304823300005293Miscanthus RhizosphereGPESNIERSPVMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0070683_10147468713300005329Corn RhizosphereMVASTLTHQPDPAIPNIACPKCGLRMQVAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0066388_10198821423300005332Tropical Forest SoilMVASTRTHQPDPAIPNIACPKCGQRMQVAAIEPTGGDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0066388_10537112613300005332Tropical Forest SoilSTRTHQPDPAVPNIACPKCGQRMQVAAIEPAGGDDRTVTFGCECGHRYDLSERAIVALARDSSDRW*
Ga0070689_10043338743300005340Switchgrass RhizosphereVMVASTHTRQFDPAIPNVVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0070705_10122683023300005440Corn, Switchgrass And Miscanthus RhizosphereMVASTLTHQPDPATPNIVCPKCGLRMQVAAIGPSSNDDRTVTFGCDCGHRYDLSERAIVTLARDSSDRW*
Ga0068867_10002229313300005459Miscanthus RhizosphereASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0073909_1014336023300005526Surface SoilTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0070679_10132168813300005530Corn RhizosphereHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCSCGNRYELSERAIVALARDSSDRW*
Ga0070695_10007847663300005545Corn, Switchgrass And Miscanthus RhizosphereGPESNIERSPVMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0070664_10051273343300005564Corn RhizosphereMVASTHTRQFDPAIPNVVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSD
Ga0066905_10035046323300005713Tropical Forest SoilMVASTRTHQPDPAIPNIACPKCGQRMQVAAIEPSGGDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0068866_1036303533300005718Miscanthus RhizospherePESNIERSPVMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0066903_10491125323300005764Tropical Forest SoilMVASTRTHQPDPAIPNIVCPKCGQRMQVAAIEPAGGDDRTVTFGCDCGHRYDLSERAIVALARDNSDRW*
Ga0068858_100031468133300005842Switchgrass RhizospherePVMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0074051_1112544823300006572SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0074047_1002224523300006576SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLFERAIVALARDSSDRW*
Ga0074049_1298889823300006580SoilMVASTHTRQFDPAIPNIVCQKCGLRMQVAAIEPAGNNDRMVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0074057_1202946423300006605SoilDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0079222_1138297513300006755Agricultural SoilMVASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGNNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0079220_1030618633300006806Agricultural SoilMVTSTLTHQVDPAIPNIVCPKCGQRMQVAAIEPAGDDRTVTFGCDCGHRHDLSERAIVALARDSSDRW*
Ga0075434_10097487423300006871Populus RhizosphereMVASTHTRQPDPAIPNIACPKCGQRMQVAAIEPAGGDDRTVTFGCDCGHHYDLPERAIVALARDSSDRW*
Ga0079219_1222213623300006954Agricultural SoilMVASTHTRQFDPAIPNIVCPKCGLRMQVASIEPSGNDDRMVTFGCDSGHRYDLSERAIVALARDSSDRW*
Ga0111539_10034556113300009094Populus RhizosphereMVASTLTHQPDSAIPNIACPKCGLRMQVAAIEPAGGDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0075418_1210053113300009100Populus RhizosphereHQPDSAIPNIACPKCGLRMQVAAIEPAGGGDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0126377_1000614633300010362Tropical Forest SoilMVASTRTHQPDPAIPNIACPKCGQRMQVAAIEPTGDDRTVTFGCDCGHLYDLSERAIVALARDSSDRW*
Ga0134125_1098739313300010371Terrestrial SoilRQSDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCSCGNRYELSERAIVALARDSSDRW*
Ga0134125_1248835313300010371Terrestrial SoilMVASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGNNDRTVTFGCDCGHRYDLSERAIVALARDSSD
Ga0134128_1243878513300010373Terrestrial SoilESNIERSPVMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGNNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0134126_1125037323300010396Terrestrial SoilMVTSTLARQTDPSFPNVACPKCGLRMRLAAVEPAGDNDRTITFDCTCGNRYELSERAITAIARDSSDRW*
Ga0157356_102552823300012474Unplanted SoilMMASTLTHQPDPGIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0157346_102257323300012480Arabidopsis RhizosphereMMASTLTHQPDPGIPNIACPKCGLRMEVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0157329_100095223300012491Arabidopsis RhizosphereMMASTLTHQPDPTIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0157341_103655513300012494Arabidopsis RhizosphereMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVA
Ga0157287_111547423300012885SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARD
Ga0157284_1000305743300012893SoilMMASTLTHQSDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0157289_1008088813300012903SoilIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0157289_1014863213300012903SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALAHDSSDRW*
Ga0157373_1053666013300013100Corn RhizosphereQSDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCSCGNRYELSERAIVALARDSSDRW*
Ga0163162_1100335023300013306Switchgrass RhizosphereMVASTLTHQPDPGIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0182008_1015647023300014497RhizosphereMMASTLTHQSDPAIPNIVCPKCGLRMQVAAIEPTGNNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0132258_1013508233300015371Arabidopsis RhizosphereMVASTHTRQFDPAIPNIVCPKCGLRMQVAAIEPTGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0132258_1156240233300015371Arabidopsis RhizosphereMVASTLTHQPDPAIPNIACPKCGLRMQIAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW*
Ga0132256_10182116813300015372Arabidopsis RhizosphereMVASTLTHQPDPAIPNIACPKCGLRMQVAAIAPAGDDDRTVTFGCDCGHRYDLSERA
Ga0132255_10020466263300015374Arabidopsis RhizosphereMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLFERAIVALARDSSDRW*
Ga0132255_10291244813300015374Arabidopsis RhizospherePDPSIPNIACPKCGLRMQVAAIKPAGDNDRMVTFGCDCGHRYDLSEQAIVALARDSSDRW
Ga0173481_1000045063300019356SoilMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0173481_1000101423300019356SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0173482_10000091143300019361SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0206354_1024555023300020081Corn, Switchgrass And Miscanthus RhizosphereMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0247785_100025583300022889SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGNNDRMVTFGCDCGHRYDLSERAIVALARDS
Ga0247797_102886623300023057SoilDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0247797_103004423300023057SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIGPASNDDRTVTFGCDCGHRYDLSERAIVTLARDSSDRL
Ga0247784_113975213300023270Plant LitterMVASPHTRQSDPAIPNIVCPKWGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARD
Ga0207713_107920323300025735Switchgrass RhizosphereMVASTHTRQFDPAIPNVVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207707_1009379453300025912Corn RhizosphereMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHSYDLSERAIVALARDSSDRW
Ga0207660_1131991113300025917Corn RhizosphereMVASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGNNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207648_1024178313300026089Miscanthus RhizosphereACGPESNIERSPVMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207499_10251713300026792SoilRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207578_100076843300026933SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALAR
Ga0207521_10205513300026940SoilGAACEPEANIERGFVMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0208761_100364333300026995SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0208637_102046113300027401SoilMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRMVTFGCDCGHRYDLSEQAIVALARDSSDRW
Ga0207571_10076623300027440SoilPDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207554_10156013300027445SoilSPVMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0209995_106840213300027471Arabidopsis Thaliana RhizosphereMVASTLTNQPDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIV
Ga0207449_10134123300027472SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207636_100311213300027479SoilMVASTHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0207981_101124343300027560SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLSERAIVALARDSSDRW
Ga0210002_100860923300027617Arabidopsis Thaliana RhizosphereMVASTLTHQPDPAIPNIACPKCGLRMQVAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0209998_1000327143300027717Arabidopsis Thaliana RhizosphereMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIGPVGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0209178_141305723300027725Agricultural SoilMVTSTLTHQVDPAIPNIVCPKCGQRMQVAAIEPAGDDRTVTFGCDCGHRHDLSERAIVALARDSSDRW
Ga0247750_103636223300027992SoilCEPEANIERGFVMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0247820_1023713013300028597SoilGAACEPEANIERGFVMVASPHTRQSDPAIPNIVCPKCGLRMQIAAIEPAGTDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0247819_1042864523300028608SoilMMASTLTHQPDPAIPNIACPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSEQAIVALARDSSDRW
(restricted) Ga0255311_101402443300031150Sandy SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIGPVDNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0310886_1113760213300031562SoilMVASTLTHQPDPDIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLSERAIV
Ga0310813_1002139863300031716SoilMVASTLTHQPDPAIPNIACPKCGLRMHVAAIAPAGDDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0307469_1088986423300031720Hardwood Forest SoilPNGRSLHPESNIERGLVMVASTLTHRPDPAIPNIACPKCGQRMQVAAIEPAGGDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0307473_1081093323300031820Hardwood Forest SoilDPAIPNIACPKCGQRMQVAAIEPAGDDRTVTFGCDCGHLYDLSERAIVALARDSSDRW
Ga0310907_1063681123300031847SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPASKDDRTVTFGCDCGHRYNLFERAIVALARDSSDRW
Ga0310904_1083681013300031854SoilMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLFERAIVALARDSSDRW
Ga0310891_1001496913300031913SoilGAACGPESNIERSPVMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0310884_1007616013300031944SoilACGPESNIERSPVMMASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGDNDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0310895_1022300523300032122SoilERSLVMVASTLTHQPDPAIPNIVCPKCGLRMQVAAIEPAGKDDRTVTFGCDCGHRYNLFERAIVALARDSSDRW
Ga0315910_1018039423300032144SoilMVASTLTHQPDPAIPDIVCPKCGLRMQVAAIGPVGNDDRTVTFGCDCGHRYDLSERAIVALARDSSDRW
Ga0307470_1143288913300032174Hardwood Forest SoilPDPATPNIACPKCGQRMQVAAIEPAGDDRTVTFGCDCGHLYDLSERAIVALARDSSDRW
Ga0307470_1190076223300032174Hardwood Forest SoilMVASPHTRQSDPAIPNIVCPKCGLRMQVAAIEPAGTDDRTVTFGCDCGHRYDLSERAI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.