Metagenome / Metatranscriptome Family F095508

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095508
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	97 residues
Representative Sequence	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Number of Associated Samples	72
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	37.14 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (44.762 % of family members)
Environment Ontology (ENVO)	Unclassified (47.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.00% β-sheet: 0.00% Coil/Unstructured: 41.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02563	Poly_export	2.86
PF02784	Orn_Arg_deC_N	0.95
PF13807	GNVR	0.95
PF13439	Glyco_transf_4	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	2.86
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.95
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
All Organisms	root	All Organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
cellular organisms	root	All Organisms → cellular organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	31.43 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	31.43 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	31.43 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	31.43 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10096060	Not Available	1130	Open in IMG/M
3300001344\|JGI20152J14361_10063680	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	881	Open in IMG/M
3300001344\|JGI20152J14361_10078272	Not Available	726	Open in IMG/M
3300001344\|JGI20152J14361_10082761	Not Available	689	Open in IMG/M
3300001347\|JGI20156J14371_10148715	Not Available	658	Open in IMG/M
3300003409\|JGI26088J50261_1030873	Not Available	1152	Open in IMG/M
3300006027\|Ga0075462_10223725	Not Available	562	Open in IMG/M
3300006400\|Ga0075503_1674412	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	896	Open in IMG/M
3300006402\|Ga0075511_1664218	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	807	Open in IMG/M
3300006402\|Ga0075511_1824333	Not Available	786	Open in IMG/M
3300006874\|Ga0075475_10305181	Not Available	656	Open in IMG/M
3300007725\|Ga0102951_1046392	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1291	Open in IMG/M
3300008012\|Ga0075480_10200401	Not Available	1056	Open in IMG/M
3300009000\|Ga0102960_1077346	Not Available	1218	Open in IMG/M
3300009027\|Ga0102957_1282520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	605	Open in IMG/M
3300009076\|Ga0115550_1064531	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1445	Open in IMG/M
3300009076\|Ga0115550_1243307	Not Available	591	Open in IMG/M
3300009124\|Ga0118687_10449815	Not Available	503	Open in IMG/M
3300009423\|Ga0115548_1032404	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1986	Open in IMG/M
3300009423\|Ga0115548_1097073	Not Available	966	Open in IMG/M
3300009433\|Ga0115545_1013529	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3492	Open in IMG/M
3300009433\|Ga0115545_1192450	Not Available	697	Open in IMG/M
3300009435\|Ga0115546_1187086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	720	Open in IMG/M
3300009438\|Ga0115559_1062274	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1556	Open in IMG/M
3300009438\|Ga0115559_1328683	Not Available	534	Open in IMG/M
3300009445\|Ga0115553_1395459	Not Available	526	Open in IMG/M
3300009496\|Ga0115570_10329277	Not Available	657	Open in IMG/M
3300009497\|Ga0115569_10239692	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	819	Open in IMG/M
3300009507\|Ga0115572_10421887	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	745	Open in IMG/M
3300012524\|Ga0129331_1116097	Not Available	798	Open in IMG/M
3300012969\|Ga0129332_1433139	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	934	Open in IMG/M
3300016724\|Ga0182048_1134331	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	613	Open in IMG/M
3300016749\|Ga0182053_1499327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	919	Open in IMG/M
3300017697\|Ga0180120_10063668	Not Available	1643	Open in IMG/M
3300017697\|Ga0180120_10261778	Not Available	700	Open in IMG/M
3300017697\|Ga0180120_10382189	Not Available	554	Open in IMG/M
3300017818\|Ga0181565_10159832	Not Available	1569	Open in IMG/M
3300017818\|Ga0181565_10812040	Not Available	587	Open in IMG/M
3300017824\|Ga0181552_10463808	Not Available	600	Open in IMG/M
3300017951\|Ga0181577_10220753	Not Available	1258	Open in IMG/M
3300017951\|Ga0181577_10378612	Not Available	904	Open in IMG/M
3300017957\|Ga0181571_10369795	Not Available	893	Open in IMG/M
3300017958\|Ga0181582_10482767	Not Available	774	Open in IMG/M
3300017962\|Ga0181581_10628380	Not Available	651	Open in IMG/M
3300017962\|Ga0181581_10804270	Not Available	560	Open in IMG/M
3300017967\|Ga0181590_10663888	Not Available	706	Open in IMG/M
3300017985\|Ga0181576_10948122	Not Available	502	Open in IMG/M
3300017986\|Ga0181569_10531284	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	792	Open in IMG/M
3300017986\|Ga0181569_10623922	Not Available	719	Open in IMG/M
3300018041\|Ga0181601_10213900	Not Available	1122	Open in IMG/M
3300018041\|Ga0181601_10314286	Not Available	863	Open in IMG/M
3300018049\|Ga0181572_10555145	Not Available	702	Open in IMG/M
3300018049\|Ga0181572_10635860	Not Available	646	Open in IMG/M
3300018413\|Ga0181560_10550691	Not Available	523	Open in IMG/M
3300018415\|Ga0181559_10626075	Not Available	580	Open in IMG/M
3300018416\|Ga0181553_10176626	Not Available	1251	Open in IMG/M
3300018416\|Ga0181553_10633821	Not Available	563	Open in IMG/M
3300018417\|Ga0181558_10413826	Not Available	713	Open in IMG/M
3300018420\|Ga0181563_10155743	Not Available	1432	Open in IMG/M
3300018420\|Ga0181563_10383417	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	805	Open in IMG/M
3300018421\|Ga0181592_10527500	Not Available	812	Open in IMG/M
3300018423\|Ga0181593_10829330	Not Available	645	Open in IMG/M
3300018424\|Ga0181591_11026946	Not Available	559	Open in IMG/M
3300018426\|Ga0181566_10776177	Not Available	655	Open in IMG/M
3300018426\|Ga0181566_10953172	Not Available	579	Open in IMG/M
3300018428\|Ga0181568_10479955	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	993	Open in IMG/M
3300018876\|Ga0181564_10547907	Not Available	617	Open in IMG/M
3300018876\|Ga0181564_10750964	Not Available	512	Open in IMG/M
3300019459\|Ga0181562_10462709	Not Available	605	Open in IMG/M
3300020056\|Ga0181574_10187394	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1337	Open in IMG/M
3300020056\|Ga0181574_10755938	Not Available	500	Open in IMG/M
3300020165\|Ga0206125_10002081	All Organisms → cellular organisms → Bacteria	21758	Open in IMG/M
3300020165\|Ga0206125_10015752	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4833	Open in IMG/M
3300020165\|Ga0206125_10025779	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3346	Open in IMG/M
3300020165\|Ga0206125_10039275	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2439	Open in IMG/M
3300020165\|Ga0206125_10288603	Not Available	616	Open in IMG/M
3300020166\|Ga0206128_1042884	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2268	Open in IMG/M
3300020169\|Ga0206127_1017817	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4653	Open in IMG/M
3300020182\|Ga0206129_10038415	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3229	Open in IMG/M
3300020182\|Ga0206129_10280112	Not Available	682	Open in IMG/M
3300020182\|Ga0206129_10333085	Not Available	597	Open in IMG/M
3300020187\|Ga0206130_10000843	All Organisms → cellular organisms → Bacteria	47919	Open in IMG/M
3300020187\|Ga0206130_10315848	Not Available	666	Open in IMG/M
3300020191\|Ga0181604_10451463	Not Available	541	Open in IMG/M
3300021389\|Ga0213868_10238983	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1068	Open in IMG/M
3300022907\|Ga0255775_1162963	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	891	Open in IMG/M
3300022935\|Ga0255780_10295448	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	772	Open in IMG/M
3300022939\|Ga0255754_10079002	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1837	Open in IMG/M
3300022939\|Ga0255754_10296384	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	766	Open in IMG/M
3300023084\|Ga0255778_10118659	Not Available	1453	Open in IMG/M
3300023119\|Ga0255762_10216641	Not Available	1048	Open in IMG/M
3300023170\|Ga0255761_10460135	Not Available	613	Open in IMG/M
3300023180\|Ga0255768_10221685	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1121	Open in IMG/M
3300025608\|Ga0209654_1037400	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1600	Open in IMG/M
3300025696\|Ga0209532_1030411	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2407	Open in IMG/M
3300025696\|Ga0209532_1045880	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1797	Open in IMG/M
3300025696\|Ga0209532_1080657	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1177	Open in IMG/M
3300025704\|Ga0209602_1183718	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	637	Open in IMG/M
3300025860\|Ga0209119_1032360	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2841	Open in IMG/M
3300025876\|Ga0209223_10053495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2442	Open in IMG/M
3300025876\|Ga0209223_10063798	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2171	Open in IMG/M
3300025876\|Ga0209223_10221264	Not Available	909	Open in IMG/M
3300025876\|Ga0209223_10323133	Not Available	689	Open in IMG/M
3300026183\|Ga0209932_1083126	Not Available	726	Open in IMG/M
3300028115\|Ga0233450_10204507	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.24%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.81%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	46.67%
Pelagic	Environmental → Aquatic → Marine → Pelagic	24.76%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	12.38%
Coastal	Environmental → Aquatic → Marine → Coastal	11.43%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	44.76%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	24.76%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	12.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.43%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	44.76%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	13.33%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	11.43%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	11.43%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.62%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.86%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.86%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.95%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.95%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012969	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100960602	3300000116	Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK*
JGI20152J14361_100636802	3300001344	Pelagic Marine	MLQLILHLVKLFFREPCSIQKEIINRSSKRRSQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDLEKFKSEVNSK*
JGI20152J14361_100782722	3300001344	Pelagic Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
JGI20152J14361_100827612	3300001344	Pelagic Marine	MLQLILQLAKLLFREPCSIQKEIINRSSKRRAQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
JGI20156J14371_101487152	3300001347	Pelagic Marine	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIELYEHLDSICKKRTRPGTVNPSQFFTLLKYPTSSLNFLNGRKVPFNDLER
JGI26088J50261_10308732	3300003409	Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSKQ*
Ga0075462_102237252	3300006027	Aqueous	CSIQKELINRSQKRRATWDHDNIELIELYDHLDSICKKRTRPGSLKLSQFSTLLKYPTSSLNFLNGRKVPFNDLDKYKSEVNSK*
Ga0075503_16744121	3300006400	Aqueous	LKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0075511_16642181	3300006402	Aqueous	KPINTMLPLFLHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0075511_18243331	3300006402	Aqueous	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTGPGTVNPSQFFTLVKYPTSSLNFLNGRK
Ga0075475_103051811	3300006874	Aqueous	MLKLILHIVTWMRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPIND
Ga0102951_10463922	3300007725	Water	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0075480_102004012	3300008012	Aqueous	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0102960_10773462	3300009000	Pond Water	MLKLILHIVTWMRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK*
Ga0102957_12825202	3300009027	Pond Water	FREPCSIQKEIINRSSKRRSQWDYDNLELIELYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0115550_10645313	3300009076	Pelagic Marine	MLQLILQLAKLLLREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLENFKSQI*
Ga0115550_12433071	3300009076	Pelagic Marine	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDILELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0118687_104498151	3300009124	Sediment	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFND
Ga0115548_10324042	3300009423	Pelagic Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRRGTINPSQFFTLMKYPTSSLNFFNGRKVPFNDLEKFKSEVNSK*
Ga0115548_10970731	3300009423	Pelagic Marine	MLQLILQLAKLLLREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKS
Ga0115545_10135295	3300009433	Pelagic Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKVLFNDLEKFKSEVNSK*
Ga0115545_11924502	3300009433	Pelagic Marine	MLKLILHIVTWMRKEPCSIQKELIIRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK*
Ga0115546_11870862	3300009435	Pelagic Marine	LLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK*
Ga0115559_10622741	3300009438	Pelagic Marine	AKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK*
Ga0115559_13286831	3300009438	Pelagic Marine	LAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIELYEHLDSICKKRTRPGTINPSQFFTLLKHPMSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0115553_13954591	3300009445	Pelagic Marine	MLKLLLFFAKSLATEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLENFKSEVNSK*
Ga0115570_103292772	3300009496	Pelagic Marine	MLKLLLFFAKSLATEPCSIQKEVINRSSKRRGQWDYDIQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK*
Ga0115569_102396921	3300009497	Pelagic Marine	MLQLLLHLAKLFFREPCSIQKEIINRSSKRRSQWDYDNLELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK*
Ga0115572_104218872	3300009507	Pelagic Marine	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLDGRKVPFNDLEKFKSEVNSK*
Ga0129331_11160972	3300012524	Aqueous	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK*
Ga0129332_14331391	3300012969	Aqueous	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSKQ*
Ga0182048_11343311	3300016724	Salt Marsh	FAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0182053_14993273	3300016749	Salt Marsh	ILHLAKLFFREPCSIQKEIINRSTKRRGQWDYDNLELIEMYEHLDSICKKRTRPVTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEANSK
Ga0180120_100636682	3300017697	Freshwater To Marine Saline Gradient	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKVPSNDLERFRSEATRK
Ga0180120_102617782	3300017697	Freshwater To Marine Saline Gradient	MLKLILLIAKLVRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK
Ga0180120_103821892	3300017697	Freshwater To Marine Saline Gradient	MLQLILHMAKLFFREPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181565_101598322	3300017818	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSKVNSK
Ga0181565_108120401	3300017818	Salt Marsh	SLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181552_104638082	3300017824	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181577_102207532	3300017951	Salt Marsh	MLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTSPGTINPNQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKGEVNSK
Ga0181577_103786122	3300017951	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDLEKFKSEVNSKW
Ga0181571_103697952	3300017957	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFALMKYPTSSLNFLKGRKVPFNDLEKFKSEVNSK
Ga0181582_104827672	3300017958	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181581_106283801	3300017962	Salt Marsh	MLPLILHLAKLFFREPSSIQKEIINRSSKRRGQWDYDNLELIEIYEHLDSISKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNLK
Ga0181581_108042701	3300017962	Salt Marsh	KCLATEPCSIQKEVINRSSKRRGQWDYDNQELIELYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181590_106638882	3300017967	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFLTLMKYPMSSLNFRNGRKVPFNDLEKFKSEVNSK
Ga0181576_109481221	3300017985	Salt Marsh	TNYSMLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181569_105312841	3300017986	Salt Marsh	MLQLLLHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFALMKYPTSSLNFLKGRKVPFN
Ga0181569_106239222	3300017986	Salt Marsh	MLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVP
Ga0181601_102139002	3300018041	Salt Marsh	MLKLILHIVTWMRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPASLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK
Ga0181601_103142862	3300018041	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFINGRKVPFNDLEKFKSEVNSK
Ga0181572_105551452	3300018049	Salt Marsh	MLQLILHLAKIFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181572_106358601	3300018049	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181560_105506912	3300018413	Salt Marsh	EPCSIQKEIINRSSKRRGQWDYDNQELIELYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181559_106260752	3300018415	Salt Marsh	LAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181553_101766261	3300018416	Salt Marsh	MLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYGNQELIEMYEHLDSICKKRTRPGTINPSQFFTLVKYPTSSLNFLNGRKVPFNDLENFKSQI
Ga0181553_106338212	3300018416	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTILKYPTSSLNFLNGRKVPFNDLEK
Ga0181558_104138262	3300018417	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYNNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSE
Ga0181563_101557432	3300018420	Salt Marsh	MLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYGNQELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNG
Ga0181563_103834172	3300018420	Salt Marsh	MLKLILHIVTWMRKEPCSIQKELINRSQKRRASWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK
Ga0181592_105275002	3300018421	Salt Marsh	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNLK
Ga0181593_108293302	3300018423	Salt Marsh	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181591_110269461	3300018424	Salt Marsh	MLPLILHLAKLFFREPCSIQKEIINRSSKRRGKWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181566_107761772	3300018426	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKIEVNSK
Ga0181566_109531722	3300018426	Salt Marsh	MLQLILHLAKIFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRIRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDLAKFKIEVNSK
Ga0181568_104799552	3300018428	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181564_105479071	3300018876	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNERKVPFNDLEKFKSEVNSK
Ga0181564_107509641	3300018876	Salt Marsh	MLKLLLFFAKSLATEPCSIQKEVINRSSKRRGQWDYDNQELIELYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0181562_104627092	3300019459	Salt Marsh	QLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLVKYPTSSLNFLNGRKVPFNDLENFKSQI
Ga0181574_101873943	3300020056	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPNQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSKVNSK
Ga0181574_107559382	3300020056	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKF
Ga0206125_1000208121	3300020165	Seawater	MLKLILHIVTWMRKEPCSIQKELINRSHKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK
Ga0206125_100157525	3300020165	Seawater	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKVLFNDLEKFKSEVNSK
Ga0206125_100257791	3300020165	Seawater	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK
Ga0206125_100392752	3300020165	Seawater	MLKLLLFFAKSLATEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK
Ga0206125_102886032	3300020165	Seawater	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK
Ga0206128_10428842	3300020166	Seawater	MLQLILHLAKIFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPRQFFTLLKYPMSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0206127_10178171	3300020169	Seawater	EPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFLTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK
Ga0206129_100384152	3300020182	Seawater	MLPLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLKGRKVPFNDLEKFKSEVNSK
Ga0206129_102801122	3300020182	Seawater	MLQLILQLAKLLFPEPCSIQKEIINRSSKRRGQWDYDNRELIELYDHLDSICKKRTGPGTVNPSQFFTLLKYPTSSLNFLNGRKVSFNDLENFKSQI
Ga0206129_103330852	3300020182	Seawater	MLQLILHLAKIFFREPCSIQKEIINRSSKRRGQWDYDILELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0206130_1000084342	3300020187	Seawater	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDILELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0206130_103158482	3300020187	Seawater	MLKLILHIVTWMRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFRSEATRK
Ga0181604_104514632	3300020191	Salt Marsh	SIIILQHQLNHQMLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDIEKFKSEVNSE
Ga0213868_102389832	3300021389	Seawater	MLQLILQLAKLLFREPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255775_11629632	3300022907	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPASSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255780_102954481	3300022935	Salt Marsh	KEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255754_100790022	3300022939	Salt Marsh	MLQLILHLSKLFFREPCSIQKEIINRSSKRRGQWDYDNQELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255754_102963841	3300022939	Salt Marsh	FREPCSIQKEVINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255778_101186591	3300023084	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFN
Ga0255762_102166411	3300023119	Salt Marsh	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEV
Ga0255761_104601351	3300023170	Salt Marsh	LQHQLNHQMLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0255768_102216853	3300023180	Salt Marsh	MLKLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSKVNSK
Ga0209654_10374003	3300025608	Marine	MLKLLLFFAKSLAKEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSKQ
Ga0209532_10304112	3300025696	Pelagic Marine	MLQLILHLVKLFFREPCSIQKEIINRSSKRRSQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0209532_10458802	3300025696	Pelagic Marine	MLQLILQLAKLLFREPCSIQKEIINRSSKRRAQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLMKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0209532_10806572	3300025696	Pelagic Marine	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTILKYPTSSLNFLNGRKVPFNDLEKFKSEINSK
Ga0209602_11837181	3300025704	Pelagic Marine	LILHLAKLFFREPCSIQKEIINRSSKRRSQWDYDNLELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKLPFNDLEKFKSEVNSK
Ga0209119_10323602	3300025860	Pelagic Marine	MLQLILQLAKLLLREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLENFKSQI
Ga0209223_100534952	3300025876	Pelagic Marine	MLQLILHLAKLFFREPCSIQKEIINRSSKRRGQWDYDNLELIELYEHLDSICKKRTRPGTVNPSQFFTLLKYPTSSLNFLNGRKVPFNDLERFKSEVNSK
Ga0209223_100637983	3300025876	Pelagic Marine	MLKLLLFFAKSLATEPCSIQKEVINRSSKRRGQWDYDNQELIELYDHLDSICKKRTGPGTVNPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK
Ga0209223_102212641	3300025876	Pelagic Marine	MLQLILHLVKLFFREPCSIQKEIINRSSKRRSQWDYDNLELIEMYEHLDSICKKRTRPGTINPSQFFTLLKYPMSSLNFL
Ga0209223_103231331	3300025876	Pelagic Marine	MLQLILQLAKLLFREPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTGPGTVNPSQFFTLLKYPTSSSNFLNGRKVPFNDLERFKSE
Ga0209932_10831262	3300026183	Pond Water	MLKFILHIVTWMRKEPCSIQKELINRSQKRRATWDHDNIELIELYDHLDLICKKRTRPGSLKLSQFSTLLKYPSSSLNFLNGRKVPINDLERFR
Ga0233450_102045073	3300028115	Salt Marsh	KLLLFFAKSLAKEPCSIQKEIINRSSKRRGQWDYDNQELIELYDHLDSICKKRTRPGTINPSQFFTLLKYPTSSLNFLNGRKVPFNDLEKFKSEVNSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095508

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences