Basic Information | |
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Family ID | F095544 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 105 |
Average Sequence Length | 66 residues |
Representative Sequence | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 3.81 % |
% of genes from short scaffolds (< 2000 bps) | 5.71 % |
Associated GOLD sequencing projects | 91 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (99.048 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.333 % of family members) |
Environment Ontology (ENVO) | Unclassified (40.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (49.524 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 10.17% Coil/Unstructured: 89.83% | Feature Viewer |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF04325 | DUF465 | 11.43 |
PF01068 | DNA_ligase_A_M | 3.81 |
PF03401 | TctC | 1.90 |
PF13467 | RHH_4 | 1.90 |
PF00239 | Resolvase | 0.95 |
PF04392 | ABC_sub_bind | 0.95 |
PF04909 | Amidohydro_2 | 0.95 |
PF01590 | GAF | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 3.81 |
COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 3.81 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 1.90 |
COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.95 |
COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 0.95 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 99.05 % |
All Organisms | root | All Organisms | 0.95 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300010401|Ga0134121_10310715 | Not Available | 1399 | Open in IMG/M |
3300014326|Ga0157380_10636302 | Not Available | 1062 | Open in IMG/M |
3300015374|Ga0132255_102102425 | Not Available | 860 | Open in IMG/M |
3300025899|Ga0207642_10152815 | Not Available | 1231 | Open in IMG/M |
3300028828|Ga0307312_10183222 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1340 | Open in IMG/M |
3300031092|Ga0308204_10320190 | Not Available | 525 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 33.33% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 6.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.76% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 4.76% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.76% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.81% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.81% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 2.86% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.86% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.86% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.90% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.90% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.90% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.90% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.90% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.90% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.90% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.95% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.95% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.95% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.95% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.95% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005164 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAC | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006578 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011106 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012488 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610 | Host-Associated | Open in IMG/M |
3300012509 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6 | Environmental | Open in IMG/M |
3300012899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2 | Environmental | Open in IMG/M |
3300012909 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1 | Environmental | Open in IMG/M |
3300012916 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2 | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018066 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1 | Environmental | Open in IMG/M |
3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027616 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027663 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028710 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380 | Environmental | Open in IMG/M |
3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300028880 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181 | Environmental | Open in IMG/M |
3300030989 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031099 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031366 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S | Environmental | Open in IMG/M |
3300034147 | Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17 | Environmental | Open in IMG/M |
3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
deepsgr_00970170 | 2199352025 | Soil | SGMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESDEEAP |
JGI12053J15887_100424401 | 3300001661 | Forest Soil | MDDQPKTRLICRQCGARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESEGEEAP* |
JGI24743J22301_100314333 | 3300001991 | Corn, Switchgrass And Miscanthus Rhizosphere | ALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0062592_1021417661 | 3300004480 | Soil | VPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0066815_100989921 | 3300005164 | Soil | DPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0070676_102215623 | 3300005328 | Miscanthus Rhizosphere | ICSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGEEAP* |
Ga0070661_1002274403 | 3300005344 | Corn Rhizosphere | PALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0070673_1002998301 | 3300005364 | Switchgrass Rhizosphere | DPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE* |
Ga0070662_1019267711 | 3300005457 | Corn Rhizosphere | EFPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0070686_1005198263 | 3300005544 | Switchgrass Rhizosphere | DPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0068861_1023956192 | 3300005719 | Switchgrass Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0068870_106961473 | 3300005840 | Miscanthus Rhizosphere | VPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESEGEESP* |
Ga0068870_110779291 | 3300005840 | Miscanthus Rhizosphere | PNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0068871_1012494882 | 3300006358 | Miscanthus Rhizosphere | YDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0074059_121643472 | 3300006578 | Soil | ICRRCAARMKLARQLPWLDHRLPAILLFQCVDCGHVDMVEWPESAGEEAP* |
Ga0074063_100653111 | 3300006953 | Soil | DRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0105247_105802842 | 3300009101 | Switchgrass Rhizosphere | HRRRCRSLEPKRSRNRVDDQPKTRLICRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESAGEEAP* |
Ga0105243_101621923 | 3300009148 | Miscanthus Rhizosphere | PKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0111538_132895001 | 3300009156 | Populus Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0075423_110517551 | 3300009162 | Populus Rhizosphere | VPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMIEWPESDGEEAP* |
Ga0105237_122860131 | 3300009545 | Corn Rhizosphere | PNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0126319_14827271 | 3300010147 | Soil | MDDQLKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMIEWPESAGEEAP* |
Ga0134128_103477243 | 3300010373 | Terrestrial Soil | DQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0105239_103745984 | 3300010375 | Corn Rhizosphere | FNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0134124_119836571 | 3300010397 | Terrestrial Soil | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESEGEETP* |
Ga0134122_104875171 | 3300010400 | Terrestrial Soil | VPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0134121_103107153 | 3300010401 | Terrestrial Soil | EPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0151489_16792882 | 3300011106 | Soil | PIPHHRSGFNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0150985_1026184141 | 3300012212 | Avena Fatua Rhizosphere | DIPCFVANANDPDWMNSQTRLTCSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0150985_1032095472 | 3300012212 | Avena Fatua Rhizosphere | MDDQPKTRLICRQCGARMKLARQLPWLDHRLPAVLLFQCIDCGHIDMVEWPEPEGE* |
Ga0150985_1065085241 | 3300012212 | Avena Fatua Rhizosphere | PKTRLTCRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE* |
Ga0150985_1095847671 | 3300012212 | Avena Fatua Rhizosphere | SGFNRRAAYDIPCSVPVLANADDPNMDDRPETRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0150985_1158979231 | 3300012212 | Avena Fatua Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP* |
Ga0150984_1154884901 | 3300012469 | Avena Fatua Rhizosphere | ANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0150984_1180273691 | 3300012469 | Avena Fatua Rhizosphere | TRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0157343_10346431 | 3300012488 | Arabidopsis Rhizosphere | HRSGSDRRAAYDIPCFVANANDPDMDDQPKTSLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEG* |
Ga0157334_10729081 | 3300012509 | Soil | MDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0157299_100661951 | 3300012899 | Soil | MDDQPKTGLICSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEPEGE* |
Ga0157290_102231671 | 3300012909 | Soil | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEEAP* |
Ga0157310_101432081 | 3300012916 | Soil | MDDQPKTRLTCRRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPESEEAP* |
Ga0137416_111489941 | 3300012927 | Vadose Zone Soil | VPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP* |
Ga0164300_100724831 | 3300012951 | Soil | SQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPEGEEAP* |
Ga0164303_114423721 | 3300012957 | Soil | IPHHRSGSDLRAAHDIPCFVANANDPGMADQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP* |
Ga0164299_113061021 | 3300012958 | Soil | ANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0164302_114271301 | 3300012961 | Soil | KTRLICRRCAARMKLARKLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0164307_110559032 | 3300012987 | Soil | ALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0164306_106909671 | 3300012988 | Soil | VPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE* |
Ga0163163_112358532 | 3300014325 | Switchgrass Rhizosphere | QPKTKLICRRCAARMKLARQLPWLDQRLPAVLLFQCIDCGHVDMVEWPESAGEEAP* |
Ga0157380_106363021 | 3300014326 | Switchgrass Rhizosphere | HAGYDIPCFVAKADDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP* |
Ga0157376_124038311 | 3300014969 | Miscanthus Rhizosphere | CFVANANDPDMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP* |
Ga0137412_101240672 | 3300015242 | Vadose Zone Soil | VPAFAIANDPNMDDRPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP* |
Ga0132255_1021024251 | 3300015374 | Arabidopsis Rhizosphere | HHRSGFDRRAEYDIPCFVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP* |
Ga0163161_108313021 | 3300017792 | Switchgrass Rhizosphere | PKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEG |
Ga0184617_10297662 | 3300018066 | Groundwater Sediment | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0184611_12047952 | 3300018067 | Groundwater Sediment | ALANADDLNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESDEEAP |
Ga0184611_12328472 | 3300018067 | Groundwater Sediment | MDDRPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPEPEGE |
Ga0184640_102754381 | 3300018074 | Groundwater Sediment | RHAGYDIPCFVANADDPDRDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGEEAP |
Ga0190270_100805653 | 3300018469 | Soil | MEDRPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPEP |
Ga0207642_101528153 | 3300025899 | Miscanthus Rhizosphere | ANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0207688_104433261 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | DRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP |
Ga0207657_104558371 | 3300025919 | Corn Rhizosphere | HHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207649_108478921 | 3300025920 | Corn Rhizosphere | FPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0207652_112577951 | 3300025921 | Corn Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDM |
Ga0207659_105737112 | 3300025926 | Miscanthus Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0207687_110990751 | 3300025927 | Miscanthus Rhizosphere | RLICHRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207690_101144061 | 3300025932 | Corn Rhizosphere | HRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEEAP |
Ga0207706_101988264 | 3300025933 | Corn Rhizosphere | PPNASPIPHHRSGSDRRAAYDTPCFVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207669_105256513 | 3300025937 | Miscanthus Rhizosphere | RRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE |
Ga0207689_101112651 | 3300025942 | Miscanthus Rhizosphere | DDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0207689_101989763 | 3300025942 | Miscanthus Rhizosphere | DDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207679_103299501 | 3300025945 | Corn Rhizosphere | RRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207651_116824351 | 3300025960 | Switchgrass Rhizosphere | PNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207712_112365742 | 3300025961 | Switchgrass Rhizosphere | CSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE |
Ga0207712_121223401 | 3300025961 | Switchgrass Rhizosphere | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0207668_109790011 | 3300025972 | Switchgrass Rhizosphere | ADDPNMDDQPKTGLICRRCAARRKLARQLPWLDHRLPAILLFQCIDCGHVDMIEWPEPEG |
Ga0207683_101030506 | 3300026121 | Miscanthus Rhizosphere | GFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0209106_10589521 | 3300027616 | Forest Soil | MDDQPKTRLICRQCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0208990_10234652 | 3300027663 | Forest Soil | MDDQPKTRLICRQCGARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESEGEEAP |
Ga0268265_109063011 | 3300028380 | Switchgrass Rhizosphere | AAYEFPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0307322_102340781 | 3300028710 | Soil | KPALRNRVDDQPKTRLICRCGARMKLARQLPWLDHRLPAIRLFQCADCGHVDMIEWPESDGEEAP |
Ga0307319_100145121 | 3300028722 | Soil | MDDQPKTRLICRRCPARMKLVRQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307297_102313622 | 3300028754 | Soil | PTTDSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307288_101334682 | 3300028778 | Soil | AAYDIPCSVPALANANDPDMDDQPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPEPEGEDGAVKRPRIASR |
Ga0307282_101000101 | 3300028784 | Soil | CRRCPARMKLVRQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307323_100321073 | 3300028787 | Soil | VPALANANDPDMDDQPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESEGEEAP |
Ga0307323_101873092 | 3300028787 | Soil | VPALANANDPDMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307284_102978851 | 3300028799 | Soil | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDGRVAR |
Ga0307503_100235051 | 3300028802 | Soil | PIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQLSWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307305_103447451 | 3300028807 | Soil | HAAYDIPCSMPALANANDPNMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGQ |
Ga0307292_104866551 | 3300028811 | Soil | GMDDQPKTRLICRRCPARMKLVRQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307302_100520713 | 3300028814 | Soil | MDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0307310_102596602 | 3300028824 | Soil | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP |
Ga0307312_101832221 | 3300028828 | Soil | MDDQLKTRLICRRCGARMKLARQLPWLDHRLPPVLLFQCIDCGHVDMIEWPESAGEEAP |
Ga0307312_103480502 | 3300028828 | Soil | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCADCGHVDMVEWPESEGEEAP |
Ga0307300_100792681 | 3300028880 | Soil | IPCSVPALANANDPNMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGNVDMVEWPESAGEEAP |
Ga0308196_10344402 | 3300030989 | Soil | TRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0308189_102711921 | 3300031058 | Soil | MDDQLKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMIEWPESAGEEAP |
Ga0308201_101439351 | 3300031091 | Soil | TTDSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
Ga0308204_103201901 | 3300031092 | Soil | MDDQLKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGNVDMVEWPESAGEEAP |
Ga0308197_101137941 | 3300031093 | Soil | VPALANANDPNMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPEPEGE |
Ga0308181_10568231 | 3300031099 | Soil | DQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESAGEEAP |
Ga0170824_1103972991 | 3300031231 | Forest Soil | MDDQPKTRVICRRCAARMKLARQLPWLDHSRPAILLFQCIDCGHVDMVEWPEPEGE |
Ga0307506_103587092 | 3300031366 | Soil | GTAERSPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP |
Ga0364925_0204491_174_350 | 3300034147 | Sediment | MDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP |
Ga0370546_037334_224_403 | 3300034681 | Soil | MDDQLKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP |
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