Metagenome Family F095652

Basic Information
Family ID	F095652
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	62 residues
Representative Sequence	MPRLAVIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRGG
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.52 %
% of genes near scaffold ends (potentially truncated)	24.76 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (59.048 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.476 % of family members)
Environment Ontology (ENVO)	Unclassified (35.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.92% β-sheet: 0.00% Coil/Unstructured: 37.08%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00510	COX3	29.52
PF03626	COX4_pro	11.43
PF02492	cobW	7.62
PF13442	Cytochrome_CBB3	1.90
PF12894	ANAPC4_WD40	1.90
PF13191	AAA_16	0.95
PF02628	COX15-CtaA	0.95
PF01320	Colicin_Pyocin	0.95
PF02630	SCO1-SenC	0.95
PF00005	ABC_tran	0.95
PF14315	DUF4380	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	29.52
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	11.43
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.95
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
All Organisms	root	All Organisms	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
cellular organisms	root	All Organisms → cellular organisms	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.71 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.95 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.95 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.95 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.90 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.95 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105480878	Not Available	1306	Open in IMG/M
3300001686\|C688J18823_11064371	Not Available	513	Open in IMG/M
3300004047\|Ga0055499_10027801	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300004114\|Ga0062593_100103843	All Organisms → cellular organisms → Bacteria → Proteobacteria	2014	Open in IMG/M
3300004114\|Ga0062593_102207257	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300004157\|Ga0062590_101392360	Not Available	697	Open in IMG/M
3300004463\|Ga0063356_104220387	Not Available	618	Open in IMG/M
3300004633\|Ga0066395_10000763	All Organisms → cellular organisms → Bacteria → Proteobacteria	11933	Open in IMG/M
3300005328\|Ga0070676_10005859	All Organisms → cellular organisms → Bacteria → Proteobacteria	6558	Open in IMG/M
3300005329\|Ga0070683_100720070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300005329\|Ga0070683_101219968	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005337\|Ga0070682_101299783	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300005338\|Ga0068868_101276492	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005340\|Ga0070689_100459907	Not Available	1084	Open in IMG/M
3300005345\|Ga0070692_10016229	All Organisms → cellular organisms → Bacteria → Proteobacteria	3540	Open in IMG/M
3300005364\|Ga0070673_100180703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300005364\|Ga0070673_100266465	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300005365\|Ga0070688_100066254	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300005441\|Ga0070700_100409742	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300005441\|Ga0070700_102007674	Not Available	502	Open in IMG/M
3300005466\|Ga0070685_10342007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1020	Open in IMG/M
3300005535\|Ga0070684_100962166	Not Available	801	Open in IMG/M
3300005614\|Ga0068856_102388788	Not Available	536	Open in IMG/M
3300005615\|Ga0070702_100709111	Not Available	768	Open in IMG/M
3300005617\|Ga0068859_100776340	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300005617\|Ga0068859_100924170	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300005718\|Ga0068866_10200415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1192	Open in IMG/M
3300005836\|Ga0074470_10930496	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300005841\|Ga0068863_101150367	Not Available	781	Open in IMG/M
3300006031\|Ga0066651_10660271	Not Available	559	Open in IMG/M
3300006237\|Ga0097621_100926901	Not Available	812	Open in IMG/M
3300006237\|Ga0097621_101204013	Not Available	713	Open in IMG/M
3300006358\|Ga0068871_100318312	Not Available	1369	Open in IMG/M
3300006844\|Ga0075428_100629342	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300009094\|Ga0111539_10041665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5519	Open in IMG/M
3300009100\|Ga0075418_12445958	Not Available	570	Open in IMG/M
3300009156\|Ga0111538_13034127	Not Available	586	Open in IMG/M
3300009609\|Ga0105347_1052654	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300009678\|Ga0105252_10038693	Not Available	1772	Open in IMG/M
3300010401\|Ga0134121_10240030	Not Available	1582	Open in IMG/M
3300010403\|Ga0134123_13203285	Not Available	527	Open in IMG/M
3300011432\|Ga0137428_1180606	Not Available	626	Open in IMG/M
3300011435\|Ga0137426_1041826	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300011440\|Ga0137433_1063607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1112	Open in IMG/M
3300012167\|Ga0137319_1066133	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012232\|Ga0137435_1089342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	922	Open in IMG/M
3300012353\|Ga0137367_10085933	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300012904\|Ga0157282_10163001	Not Available	690	Open in IMG/M
3300012960\|Ga0164301_10353055	Not Available	1011	Open in IMG/M
3300012984\|Ga0164309_10884455	Not Available	726	Open in IMG/M
3300012989\|Ga0164305_11115796	Not Available	678	Open in IMG/M
3300013297\|Ga0157378_10957340	Not Available	889	Open in IMG/M
3300014166\|Ga0134079_10073709	Not Available	1253	Open in IMG/M
3300015371\|Ga0132258_10086902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7314	Open in IMG/M
3300015371\|Ga0132258_10200993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4834	Open in IMG/M
3300015371\|Ga0132258_10210589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4722	Open in IMG/M
3300015372\|Ga0132256_101857151	Not Available	710	Open in IMG/M
3300015372\|Ga0132256_103102045	Not Available	559	Open in IMG/M
3300015372\|Ga0132256_103141795	Not Available	555	Open in IMG/M
3300018073\|Ga0184624_10544611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300018083\|Ga0184628_10264016	Not Available	904	Open in IMG/M
3300018469\|Ga0190270_12462053	Not Available	582	Open in IMG/M
3300018481\|Ga0190271_10634044	Not Available	1189	Open in IMG/M
3300021082\|Ga0210380_10167423	Not Available	988	Open in IMG/M
3300021445\|Ga0182009_10385248	Not Available	722	Open in IMG/M
3300022756\|Ga0222622_10049504	Not Available	2365	Open in IMG/M
3300022898\|Ga0247745_1047018	Not Available	676	Open in IMG/M
3300024055\|Ga0247794_10040019	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300024055\|Ga0247794_10344477	Not Available	509	Open in IMG/M
3300024186\|Ga0247688_1012085	Not Available	1218	Open in IMG/M
3300024254\|Ga0247661_1051110	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300024275\|Ga0247674_1034375	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025315\|Ga0207697_10229728	Not Available	819	Open in IMG/M
3300025315\|Ga0207697_10444449	Not Available	575	Open in IMG/M
3300025899\|Ga0207642_10840322	Not Available	586	Open in IMG/M
3300025903\|Ga0207680_10677527	Not Available	739	Open in IMG/M
3300025923\|Ga0207681_10404264	Not Available	1103	Open in IMG/M
3300025926\|Ga0207659_10267288	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300025930\|Ga0207701_10053945	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300025931\|Ga0207644_10775759	Not Available	801	Open in IMG/M
3300025936\|Ga0207670_10870091	Not Available	754	Open in IMG/M
3300025940\|Ga0207691_11596143	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300025944\|Ga0207661_10925205	Not Available	803	Open in IMG/M
3300025949\|Ga0207667_11865641	Not Available	564	Open in IMG/M
3300025960\|Ga0207651_10770701	Not Available	851	Open in IMG/M
3300026041\|Ga0207639_11137529	Not Available	732	Open in IMG/M
3300026075\|Ga0207708_10651484	Not Available	896	Open in IMG/M
3300027874\|Ga0209465_10004705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5935	Open in IMG/M
3300027907\|Ga0207428_10005853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11402	Open in IMG/M
3300028380\|Ga0268265_10057635	All Organisms → cellular organisms → Bacteria	2962	Open in IMG/M
3300028381\|Ga0268264_12274590	Not Available	549	Open in IMG/M
3300028768\|Ga0307280_10002731	All Organisms → cellular organisms → Bacteria	4424	Open in IMG/M
3300028782\|Ga0307306_10203864	Not Available	567	Open in IMG/M
3300028819\|Ga0307296_10392492	Not Available	758	Open in IMG/M
3300031543\|Ga0318516_10829344	Not Available	522	Open in IMG/M
3300031546\|Ga0318538_10831588	Not Available	502	Open in IMG/M
3300031562\|Ga0310886_10468372	Not Available	755	Open in IMG/M
3300031716\|Ga0310813_10598731	Not Available	975	Open in IMG/M
3300031858\|Ga0310892_10510371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	802	Open in IMG/M
3300031901\|Ga0307406_12005261	Not Available	517	Open in IMG/M
3300031908\|Ga0310900_10064596	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.95%
Host-Associated	Host-Associated	39.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.57%
Plants	Host-Associated → Plants	39.05%
Aquatic	Environmental → Aquatic	12.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.19%
Sediment	Environmental → Aquatic → Sediment	10.48%
Roots	Host-Associated → Plants → Roots	2.86%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Marine	Environmental → Aquatic → Marine	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.38%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054808781	3300000364	Soil	MARFAVVMIVLLGASRAWALCPNCIQQSPASTLRLVGLFLLVPPAVFFAVAIAIRRILR
C688J18823_110643712	3300001686	Soil	MARLAVVIAVLLAASRAWALCPNCIQQSPTSTLRLVGLFLLVPPAVFFAVAIAIRRIQRRG*
Ga0055499_100278011	3300004047	Natural And Restored Wetlands	MMPRSVVAAVVLLWASRAWALCPNCISQSPPSTLRLVGLFLLVPPAIFFAVAIAVRRILRRG*
Ga0062593_1001038432	3300004114	Soil	MPRSVVVAIVLLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAIVVRRILRRG*
Ga0062593_1022072573	3300004114	Soil	MPRAAVASAIVLLSSSPAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVA
Ga0062590_1013923602	3300004157	Soil	MMPRSVVVAIVLLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAIVVRRILRRG*
Ga0063356_1042203871	3300004463	Arabidopsis Thaliana Rhizosphere	MPRLAVIAVVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAIRRIMRDS*
Ga0066395_100007638	3300004633	Tropical Forest Soil	MTFRFAVVTIVLLAASRAWALCPNCIAQSPASTLRLVGAFLLVPPAVFFAVAIVIRRILRSDR*
Ga0070676_100058596	3300005328	Miscanthus Rhizosphere	MMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0070683_1007200703	3300005329	Corn Rhizosphere	MMLRLGVAIAVLLAASRAWALCPSCIAQSPGATLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0070683_1012199683	3300005329	Corn Rhizosphere	MTPRTATARFASAGIVLLGASPAWALCPNCLSQSPPSTLRLIGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0070682_1012997831	3300005337	Corn Rhizosphere	MARFAVVAIVLLGASPAWALCPNCIQQSPASTLRLVGLFLLVPPAVFFAVAIAIRR
Ga0068868_1012764922	3300005338	Miscanthus Rhizosphere	MTPRTATARFASAAIVLLGASPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0070689_1004599073	3300005340	Switchgrass Rhizosphere	MPRLAIIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVR
Ga0070692_100162291	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRIL
Ga0070673_1001807032	3300005364	Switchgrass Rhizosphere	MPRLAIIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDG*
Ga0070673_1002664651	3300005364	Switchgrass Rhizosphere	MARGVVVAIVLLASSRAWALCPSCIAQSPAATLRLVGLFLLVPPAIFFAVAIV
Ga0070688_1000662543	3300005365	Switchgrass Rhizosphere	MMRGLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0070700_1004097422	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MMRGLVLLAVVVLWASRAWALCPNCLSQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0070700_1020076742	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLAVIAVVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRIL
Ga0070685_103420073	3300005466	Switchgrass Rhizosphere	MPRATVVSLILVLASSQAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0070684_1009621662	3300005535	Corn Rhizosphere	MMIRLGVAIAVLLVASRAWALCPSCIAQSPGATLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0068856_1023887882	3300005614	Corn Rhizosphere	MMRRLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAIVVRRILRRG*
Ga0070702_1007091112	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VVIAIVVLWASRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDG*
Ga0068859_1007763402	3300005617	Switchgrass Rhizosphere	MMPRSVVVAIVLLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0068859_1009241703	3300005617	Switchgrass Rhizosphere	MMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVA
Ga0068866_102004152	3300005718	Miscanthus Rhizosphere	VRSAARVAAMLIVLLGASRAWALCPYCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0074470_109304962	3300005836	Sediment (Intertidal)	MARFAVVALVLLGASPAWALCPNCIQQSPASTLRLVGLFLLVPPAVFFAVAIAIRRVLRRG*
Ga0068863_1011503672	3300005841	Switchgrass Rhizosphere	MSRGVVVAIVLLASSRAWALCPSCIAQSPAATLRLVGLFLLVPPAIFFAVAIVIRRILRRD*
Ga0066651_106602712	3300006031	Soil	MTARFAVVTIVLLAASRAWALCPNCIAQSPASTLRLVGLFLLVPPAIFFAVAITVRRILRRSR*
Ga0097621_1009269012	3300006237	Miscanthus Rhizosphere	MMPRSVVVAIVLLWASRAWALCPNCIAQSPASTLRLVGLFLLVPPAVFFSVAIAVRRILRRG*
Ga0097621_1012040132	3300006237	Miscanthus Rhizosphere	MRPVVAAVPVAAVVLLPAARAWALCPNCISQSPASTLRLVGLFLLIPPAVFFTVAIVVRRILRRG*
Ga0068871_1003183123	3300006358	Miscanthus Rhizosphere	MTKPRIATVVVPLVSLFVLLAAPRAWALCPNCIAQSPASTLRLVGLFLLVPPAVFFSVAIAVRRILRRG*
Ga0075428_1006293423	3300006844	Populus Rhizosphere	MPRLAVIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRGG*
Ga0111539_100416651	3300009094	Populus Rhizosphere	MPRVAVIAIVLLWTTHAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDG*
Ga0075418_124459582	3300009100	Populus Rhizosphere	DAGDGVSGERALMPRVAVIAIVLLWTTHAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDG*
Ga0111538_130341273	3300009156	Populus Rhizosphere	MPRLAVIAVVLLWTARAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRR
Ga0105347_10526542	3300009609	Soil	ERALMPRLAVIAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDTVD*
Ga0105252_100386932	3300009678	Soil	MARLAVIAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRER*
Ga0134121_102400304	3300010401	Terrestrial Soil	MIKPRIATVVVPLVSLFVLLAAPRAWALCPNCIAQSPASTLRLVGLFLLVPPAVFFSVAIAVRRILRRG*
Ga0134123_132032852	3300010403	Terrestrial Soil	PGERALMPRATVVSLILVLASSQAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0137428_11806062	3300011432	Soil	MPRLAVIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDRDQQG*
Ga0137426_10418261	3300011435	Soil	MARLAVIAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDD*
Ga0137433_10636072	3300011440	Soil	MPRLAVIAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDTVD*
Ga0137319_10661331	3300012167	Soil	MPRLAVIAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRER*
Ga0137435_10893422	3300012232	Soil	MPRSAVASAIVLLSSSPAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0137367_100859334	3300012353	Vadose Zone Soil	MARFAVAILVLLAASRAWALCPNCIQQSPTSTLRLVGLFLLVPPTVFFAVAIAIRRIQRRG*
Ga0157282_101630011	3300012904	Soil	MPRLAVMALAIVLLWTTHAWALCPNCISQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRDRC
Ga0164301_103530552	3300012960	Soil	MTPRTATARFASAAIVLLGASPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVASAVRRILRRG*
Ga0164309_108844552	3300012984	Soil	MTPRTATARFASAAIVLLGASPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRIRRRG*
Ga0164305_111157961	3300012989	Soil	TATARFASAAIVLLGASPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0157378_109573401	3300013297	Miscanthus Rhizosphere	PLPGERALMPRATVVSLILVLASSQAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0134079_100737093	3300014166	Grasslands Soil	MARALVLAIGLLASSPAWALCPSCLAQSPAATLRLVGLFLLVPPAVFFAVAIAIRRILHRE*
Ga0132258_100869022	3300015371	Arabidopsis Rhizosphere	MTRALVVTIGLLASSPARALCPSCIAQSPGATLRLVGLFLLVPPAVFFAVAIAIRWILRRD*
Ga0132258_102009937	3300015371	Arabidopsis Rhizosphere	MMRRLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0132258_102105896	3300015371	Arabidopsis Rhizosphere	MIRRFVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG*
Ga0132256_1018571512	3300015372	Arabidopsis Rhizosphere	MPRTAVVSLIVLLSSSHAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG*
Ga0132256_1031020452	3300015372	Arabidopsis Rhizosphere	VVTIGLLASSPARALCPSCIAQSPGATLRLVGLFLLVPPAVFFAVAIAIRWILRRD*
Ga0132256_1031417952	3300015372	Arabidopsis Rhizosphere	MMPRSVVAAIVLLSSSRAWALCPNCIAQSPTSTLRLVGLFLLVPPAIFFAVAIVVRRILRRG*
Ga0184624_105446111	3300018073	Groundwater Sediment	DGVSGERALMPRLAVIAVVLLWTTHAWALCPNCIAQSPSSTLRVVGLFLLVPPAVFFAVAIAVRRILRDG
Ga0184628_102640163	3300018083	Groundwater Sediment	MPRLAVIAIVLFWSTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRD
Ga0190270_114295771	3300018469	Soil	GGGGGRVDARDGLSRDRALMARLAVIAVVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRLLRRG
Ga0190270_124620531	3300018469	Soil	MPRLAVIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVVIAVRRILRD
Ga0190271_106340442	3300018481	Soil	MPRLAVITVVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRD
Ga0210380_101674233	3300021082	Groundwater Sediment	MPRPAVIAAAVAAVVLLATSPARALCPNCIAQSPASTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0182009_103852483	3300021445	Soil	MIGAKRAATVCFAVAAIVLLGGAPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0222622_100495041	3300022756	Groundwater Sediment	MRRLAVITAAVVLLAASPAWALCPNCIPQSPASTLRLVGLFLLVPPAIFFAVAIAIRRILRRAE
Ga0247745_10470183	3300022898	Soil	VRLAVMAIVLLGASRAWALCPNCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0247794_100400192	3300024055	Soil	MTPRTATARFASAGIVLLGASPAWALCPNCLSQSPPSTLRLIGLFLLVPPAVFFAVAIAVRRILRRG
Ga0247794_103444772	3300024055	Soil	MMPRSVVVAIVLLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAIVVRRILRRG
Ga0247686_10345541	3300024177	Soil	GCGRRDRADAGDNISGGRSMTRVAAAIVAIVVLSSRAWALCPNCIAQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0247688_10120852	3300024186	Soil	MTRVAAAIVAIVVLSSRAWALCPNCIAQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0247661_10511103	3300024254	Soil	MTRVAAAIVAIVVLSSRAWALCPNCIAQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILR
Ga0247674_10343753	3300024275	Soil	MTRVAAAIVAIVVLSSRAWALCPNCIAQSPPSTLRLVGLFLLVPPAVFFAV
Ga0207697_102297282	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0207697_104444492	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VRSAARVAAMLIVLLGASRAWALCPNCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207682_105331241	3300025893	Miscanthus Rhizosphere	GGGRADAGDGLSRAGGLMMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0207642_108403222	3300025899	Miscanthus Rhizosphere	LIVLLGASRAWALCPYCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207680_106775272	3300025903	Switchgrass Rhizosphere	MPRATVVSLILVLASSQAWALCPNCIAQSPTSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207681_104042642	3300025923	Switchgrass Rhizosphere	MMRGLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0207659_102672881	3300025926	Miscanthus Rhizosphere	MPRLAVMALAIVLLWTTHAWALCPNCISQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRI
Ga0207701_100539454	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLIVLLGASRAWALCPNCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207644_107757592	3300025931	Switchgrass Rhizosphere	MTPRTATARFASAAIVLLGASPAWALCPNCLSQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207644_115633651	3300025931	Switchgrass Rhizosphere	DRVDAGDRLSRGRELMMPRSVVVAIVLLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAIVVRRILRRG
Ga0207670_108700912	3300025936	Switchgrass Rhizosphere	MPRLAIIAIVLLWATRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRD
Ga0207691_115961431	3300025940	Miscanthus Rhizosphere	MPRLAVIALAIVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRER
Ga0207661_109252051	3300025944	Corn Rhizosphere	MMIRLGVAIAVLLVASRAWALCPSCIAQSPGATLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207667_118656412	3300025949	Corn Rhizosphere	VRSAVRLAVMAIVLLGASRAWALCPNCIQQSPQSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207651_107707012	3300025960	Switchgrass Rhizosphere	VRSAVRLAVMAIVLLGASRAWALCPNCIQQSPQSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0207639_111375293	3300026041	Corn Rhizosphere	MMRRLVLIAVVVLWASRGWALCPNCISQSPPSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0207708_106514843	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLAVIAVVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRD
Ga0209465_100047055	3300027874	Tropical Forest Soil	MTFRFAVVTIVLLAASRAWALCPNCIAQSPASTLRLVGAFLLVPPAVFFAVAIVIRRILRSDR
Ga0207428_1000585312	3300027907	Populus Rhizosphere	MPRVAVIAIVLLWTTHAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRD
Ga0268265_100576351	3300028380	Switchgrass Rhizosphere	GLVLLAVVVLWASRAWALCPNCLSQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0268264_122745903	3300028381	Switchgrass Rhizosphere	MMRRLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGVFLLVPPAIFFAVAI
Ga0307280_100027314	3300028768	Soil	MARLAVVMIVLLGASRAWALCPNCIQQSPASTLRLVGLFLLVPPAVFFAVAIAIRRILRR
Ga0307306_102038643	3300028782	Soil	MARLAVVITVLLAGSRAWALCPNCIQQSPTSTLRLVGLFLLVPPAVFFAVAIAIRRIQRR
Ga0307296_103924921	3300028819	Soil	MARLAVVMTIVLLGASRAWALCPNCIQQSPASTLRLVGLFLLVPPAVFFAVAIAIRRALRRG
Ga0318516_108293442	3300031543	Soil	VAGVAVLGASARAWALCPNCLGQSAAFTTTLRLVGIFLLVPPAVFFTVALWIRRIHRR
Ga0318538_108315882	3300031546	Soil	MRARRGWAGVAGVAVLGASARAWALCPNCLGQSAAFTTTLRLVGIFLLVPPAVFFTVALWIRRIHRR
Ga0310886_104683722	3300031562	Soil	MPRLAVIAVVLLWTTRAWALCPNCIAQSPSSTLRLVGLFLLVPPAVFFAVAIAVRRILRAEDR
Ga0310813_105987313	3300031716	Soil	MARSALASAIVLLAASPAWALCPNCISQSPSSTLRLVGLFLLVPPAIFFAVAIAVRRILRRG
Ga0310892_105103713	3300031858	Soil	MMRGLVLLAVVVLWASRAWALCPNCLSQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG
Ga0307406_120052611	3300031901	Rhizosphere	AAGVAGVGLLSASRAWALCPNCIAQSPGSTLRLVGLFLLVPPAVFFAVAIAVRRILRRG
Ga0310900_100645962	3300031908	Soil	MMRRLVLLAVVVLWASRAWALCPNCISQSPPSTLRLVGLFLLAPPAVFFAVAIVVRRILRRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095652

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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