Metagenome Family F095703

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095703
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	68 residues
Representative Sequence	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Number of Associated Samples	51
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.29 %
% of genes near scaffold ends (potentially truncated)	23.81 %
% of genes from short scaffolds (< 2000 bps)	84.76 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (30.476 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (45.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.03% β-sheet: 25.25% Coil/Unstructured: 71.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07238	PilZ	18.10
PF10771	DUF2582	8.57
PF07589	PEP-CTERM	5.71
PF03972	MmgE_PrpD	0.95
PF00989	PAS	0.95
PF13180	PDZ_2	0.95
PF02811	PHP	0.95
PF00581	Rhodanese	0.95
PF01979	Amidohydro_1	0.95
PF00216	Bac_DNA_binding	0.95
PF13185	GAF_2	0.95
PF02518	HATPase_c	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.95
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
All Organisms	root	All Organisms	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Viruses	superkingdom	All Organisms → Viruses	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.76 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.90 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	19.05 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	1.90 %
Nucleocytoviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	19.05 %
Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1.90 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.90 %
Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1.90 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.95 %
Pimascovirales	order	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Pimascovirales	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1.90 %
Candidatus Desulfacyla	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Candidatus Desulfacyla	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	0.95 %
Marseilleviridae	family	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Pimascovirales → Marseilleviridae	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1.90 %
unclassified Marseilleviridae	no rank	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Pimascovirales → Marseilleviridae → unclassified Marseilleviridae	0.95 %
Candidatus Desulfacyla euxinica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Candidatus Desulfacyla → Candidatus Desulfacyla euxinica	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1.90 %
Marseillevirus LCMAC102	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Pimascovirales → Marseilleviridae → unclassified Marseilleviridae → Marseillevirus LCMAC102	0.95 %
Candidatus Desulfacyla euxinica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Candidatus Desulfacyla → Candidatus Desulfacyla euxinica	0.95 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_108429563	Not Available	810	Open in IMG/M
3300004481\|Ga0069718_16074045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	991	Open in IMG/M
3300005204\|Ga0068997_10166117	Not Available	515	Open in IMG/M
3300005254\|Ga0068714_10069963	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300005254\|Ga0068714_10122808	Not Available	1223	Open in IMG/M
3300006224\|Ga0079037_100004153	All Organisms → cellular organisms → Bacteria → Proteobacteria	8472	Open in IMG/M
3300006224\|Ga0079037_100010541	All Organisms → cellular organisms → Bacteria	5988	Open in IMG/M
3300006224\|Ga0079037_100347862	Not Available	1389	Open in IMG/M
3300006224\|Ga0079037_100394271	Not Available	1309	Open in IMG/M
3300006224\|Ga0079037_100754969	Not Available	953	Open in IMG/M
3300006224\|Ga0079037_100803565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	923	Open in IMG/M
3300006224\|Ga0079037_100937997	Not Available	855	Open in IMG/M
3300006224\|Ga0079037_101421957	Not Available	691	Open in IMG/M
3300006930\|Ga0079303_10182067	Not Available	834	Open in IMG/M
3300009091\|Ga0102851_10119416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Candidatus Desulfacyla → Candidatus Desulfacyla euxinica	2330	Open in IMG/M
3300009091\|Ga0102851_12322901	Not Available	612	Open in IMG/M
3300009111\|Ga0115026_10838895	Not Available	722	Open in IMG/M
3300009111\|Ga0115026_10991727	Not Available	671	Open in IMG/M
3300009111\|Ga0115026_11752372	Not Available	525	Open in IMG/M
3300009167\|Ga0113563_10005164	All Organisms → cellular organisms → Bacteria	8505	Open in IMG/M
3300009167\|Ga0113563_10475193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1356	Open in IMG/M
3300009167\|Ga0113563_10607526	Not Available	1212	Open in IMG/M
3300009167\|Ga0113563_10636689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300009167\|Ga0113563_10817300	Not Available	1057	Open in IMG/M
3300009167\|Ga0113563_12118353	Not Available	674	Open in IMG/M
3300009549\|Ga0116137_1070890	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	1074	Open in IMG/M
3300009614\|Ga0116104_1049822	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium CG_4_10_14_0_8_um_filter_41_23	919	Open in IMG/M
3300009615\|Ga0116103_1123307	Not Available	644	Open in IMG/M
3300009618\|Ga0116127_1071195	Not Available	954	Open in IMG/M
3300010339\|Ga0074046_10705965	Not Available	592	Open in IMG/M
3300012931\|Ga0153915_10275575	Not Available	1871	Open in IMG/M
3300012931\|Ga0153915_10649669	Not Available	1216	Open in IMG/M
3300012931\|Ga0153915_11134466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	912	Open in IMG/M
3300012931\|Ga0153915_11148716	Not Available	906	Open in IMG/M
3300012931\|Ga0153915_11172501	Not Available	897	Open in IMG/M
3300012931\|Ga0153915_11670846	Not Available	745	Open in IMG/M
3300012931\|Ga0153915_11824685	Not Available	712	Open in IMG/M
3300012931\|Ga0153915_11911461	Not Available	694	Open in IMG/M
3300012931\|Ga0153915_13210953	Not Available	531	Open in IMG/M
3300012931\|Ga0153915_13555476	Not Available	504	Open in IMG/M
3300012964\|Ga0153916_10129463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2435	Open in IMG/M
3300012964\|Ga0153916_10525630	Not Available	1255	Open in IMG/M
3300012964\|Ga0153916_10855093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	990	Open in IMG/M
3300012964\|Ga0153916_11643582	Not Available	716	Open in IMG/M
3300012964\|Ga0153916_12364410	Not Available	598	Open in IMG/M
3300017929\|Ga0187849_1005756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9719	Open in IMG/M
3300017931\|Ga0187877_1023877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	3216	Open in IMG/M
3300017939\|Ga0187775_10033588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1488	Open in IMG/M
3300018019\|Ga0187874_10157879	Not Available	956	Open in IMG/M
3300018024\|Ga0187881_10008510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6894	Open in IMG/M
3300018089\|Ga0187774_10024491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2430	Open in IMG/M
3300022208\|Ga0224495_10298249	Not Available	650	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10038007	All Organisms → cellular organisms → Bacteria → Proteobacteria	3636	Open in IMG/M
3300024056\|Ga0124853_1064042	Not Available	977	Open in IMG/M
3300027680\|Ga0207826_1062043	Not Available	1032	Open in IMG/M
3300027690\|Ga0209164_1044564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2140	Open in IMG/M
3300027690\|Ga0209164_1064487	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300027811\|Ga0256868_10189095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300027877\|Ga0209293_10081628	Not Available	1420	Open in IMG/M
3300027877\|Ga0209293_10123596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1201	Open in IMG/M
3300027877\|Ga0209293_10672861	Not Available	548	Open in IMG/M
3300027887\|Ga0208980_10506041	Not Available	692	Open in IMG/M
3300027900\|Ga0209253_10024957	All Organisms → cellular organisms → Bacteria	5019	Open in IMG/M
3300027917\|Ga0209536_100033767	All Organisms → cellular organisms → Bacteria → Proteobacteria	6916	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10294786	Not Available	563	Open in IMG/M
3300031949\|Ga0214473_11062217	Not Available	850	Open in IMG/M
3300032897\|Ga0335071_11573371	Not Available	602	Open in IMG/M
3300032897\|Ga0335071_12082428	Not Available	510	Open in IMG/M
3300033413\|Ga0316603_10578471	Not Available	1040	Open in IMG/M
3300033414\|Ga0316619_10209483	Not Available	1412	Open in IMG/M
3300033414\|Ga0316619_10652122	Not Available	882	Open in IMG/M
3300033414\|Ga0316619_10688606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	861	Open in IMG/M
3300033419\|Ga0316601_101512051	Not Available	676	Open in IMG/M
3300033433\|Ga0326726_10002556	All Organisms → cellular organisms → Bacteria	16691	Open in IMG/M
3300033433\|Ga0326726_11530864	Not Available	649	Open in IMG/M
3300033433\|Ga0326726_11789436	Not Available	598	Open in IMG/M
3300033434\|Ga0316613_10422042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	899	Open in IMG/M
3300033480\|Ga0316620_10217951	Not Available	1607	Open in IMG/M
3300033480\|Ga0316620_10297056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1412	Open in IMG/M
3300033480\|Ga0316620_10379890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1269	Open in IMG/M
3300033480\|Ga0316620_10493981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1129	Open in IMG/M
3300033480\|Ga0316620_10542979	Not Available	1082	Open in IMG/M
3300033480\|Ga0316620_10564239	Not Available	1063	Open in IMG/M
3300033480\|Ga0316620_11146134	Not Available	761	Open in IMG/M
3300033480\|Ga0316620_11779515	Not Available	611	Open in IMG/M
3300033485\|Ga0316626_11195510	Not Available	679	Open in IMG/M
3300033486\|Ga0316624_10205856	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Pimascovirales → Marseilleviridae → unclassified Marseilleviridae → Marseillevirus LCMAC102	1526	Open in IMG/M
3300033486\|Ga0316624_11174728	Not Available	697	Open in IMG/M
3300033486\|Ga0316624_11399498	Not Available	641	Open in IMG/M
3300033486\|Ga0316624_12238902	Not Available	509	Open in IMG/M
3300033487\|Ga0316630_10009096	All Organisms → cellular organisms → Bacteria → Proteobacteria	4855	Open in IMG/M
3300033487\|Ga0316630_11319937	Not Available	645	Open in IMG/M
3300033493\|Ga0316631_10101573	Not Available	1017	Open in IMG/M
3300033513\|Ga0316628_100216943	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300033513\|Ga0316628_100943216	Not Available	1143	Open in IMG/M
3300033513\|Ga0316628_101108951	Not Available	1052	Open in IMG/M
3300033513\|Ga0316628_101533271	Not Available	888	Open in IMG/M
3300033513\|Ga0316628_101561324	Not Available	879	Open in IMG/M
3300033513\|Ga0316628_102568854	Not Available	672	Open in IMG/M
3300033513\|Ga0316628_103863641	Not Available	537	Open in IMG/M
3300033557\|Ga0316617_101095000	Not Available	785	Open in IMG/M
3300033977\|Ga0314861_0195689	Not Available	959	Open in IMG/M
3300033991\|Ga0334965_0125749	Not Available	1102	Open in IMG/M
3300034078\|Ga0373900_094190	Not Available	578	Open in IMG/M
3300034083\|Ga0373901_017690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1239	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Engineered	Engineered	5.71%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	53.33%
Terrestrial	Environmental → Terrestrial	40.95%
Lab Enrichment	Engineered → Lab Enrichment	3.81%
Bioremediation	Engineered → Bioremediation	1.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.57%
Soil	Environmental → Terrestrial → Soil	37.14%
Marine	Environmental → Aquatic → Marine	4.76%
Defined Media	Engineered → Lab Enrichment → Defined Media	3.81%
Peat	Environmental → Terrestrial → Peat	2.86%
Metal	Engineered → Bioremediation → Metal	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.95%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	38.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.67%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	3.81%
Lake	Environmental → Aquatic → Freshwater → Lake	2.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.95%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.95%
Sediment	Environmental → Aquatic → Marine → Sediment	0.95%
Loam	Environmental → Terrestrial → Soil → Loam	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	34.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	34.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	3.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.90%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.95%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.95%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	30.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	16.19%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	14.29%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.81%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	3.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.90%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.95%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.95%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005254	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG	Engineered	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300024054 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M
3300034078	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.1	Engineered	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1084295632	3300001213	Wetland	VNRTISFPKAIVMGRKVRLRNEAFKDMRVREWRFSEVERGKLVLFRPEGLILKVEIEDIDWEVHNKAKIED*
Ga0069718_160740452	3300004481	Sediment	VNEMLSFPKAILMGTKVQLRGEAFKDVKIREWQFSGVDKGRLVLSRPEGLVLKVKLEDIDWQNHNKPKIED*
Ga0068997_101661171	3300005204	Natural And Restored Wetlands	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0068714_100699634	3300005254	Enrichment Culture	LRNEAFKNMRVREWRFSGIEKGKLVLFQPEGHILRVEFGDIDWKEQDKPKVEN*
Ga0068714_101228082	3300005254	Enrichment Culture	MSKAIVMGARVRLRKEAFKDVKARDWQFSGVEKGKLVLWRPEGLILRAKLEDIDWEVHNKPKIED*
Ga0079037_1000041538	3300006224	Freshwater Wetlands	MGTKVQLRGEAFKDVKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0079037_10001054110	3300006224	Freshwater Wetlands	VNEVASFPKAILMGTKVQLRKETFKEVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWTNHNKAKIED*
Ga0079037_1003478623	3300006224	Freshwater Wetlands	VNEVLSFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDRGKLVLSRPEGLILKVKFDDIDWKNHNKPKIED*
Ga0079037_1003942713	3300006224	Freshwater Wetlands	MGTKVRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRVQFEDIDWEDQNRPKIED*
Ga0079037_1007549693	3300006224	Freshwater Wetlands	VNEAISIPKVIVMGTRVRLRNEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEIHNKPKIED*
Ga0079037_1008035651	3300006224	Freshwater Wetlands	GTKVRLRNEAFKDMRVREWRFSGIEKGNLVLFRPEGHILRVEFEEIDWKEQDKTKVED*
Ga0079037_1009379971	3300006224	Freshwater Wetlands	MNETISFPKAIAMGTKVQLKNKAFKDMWVREWQFSGVEKGKIVLSRPGGLILKAKLEDIDWEVQNKPKIED*
Ga0079037_1014219572	3300006224	Freshwater Wetlands	VKEGLSFPKAMVIGTKVRLRNEAFKDMRVREWRFSGVEEGKLVLFRPEGRILRVEFEDIDWKEQNKPKIED*
Ga0079303_101820673	3300006930	Deep Subsurface	VNEVASFPKAILMGTKVQLRKETFKEVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDID
Ga0102851_101194163	3300009091	Freshwater Wetlands	MLSFPKAILMGTKVQLRGEAFKDVKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0102851_123229011	3300009091	Freshwater Wetlands	VKEAISFPRAIVMGTKVCLRNEAFKDMRVREWRFSGIEKGKLVLFCPEGHILRV
Ga0115026_108388951	3300009111	Wetland	QYSRKQYREAISFPKAIVMGTKVRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRFQFEDIDWEDQNRPKIED*
Ga0115026_109917271	3300009111	Wetland	MPKALVMGIRVRLRDEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEIHNKPKIED*
Ga0115026_117523722	3300009111	Wetland	VKEAISFPRAIVMGTKVCLRNEAFKDMRVREWRFSGIEKGKLVLFRPEGHILRVEFEDID
Ga0113563_1000516414	3300009167	Freshwater Wetlands	VNEVASFPKAILMGTKVQLRKETFKDVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWTNHNKAKIED*
Ga0113563_104751932	3300009167	Freshwater Wetlands	VNEVLSFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0113563_106075262	3300009167	Freshwater Wetlands	VNEAIYLPKAIVMGTKVRLRKEAFKDMRFREWRFSEVEEGKLVLFRPEGLILKVEFEDIDWDFHNKPKIED*
Ga0113563_106366892	3300009167	Freshwater Wetlands	MNEAISFPKAIAMGTKIQLKNKAFKDMWVREWQFSGVEKGKIVLSRPGGLILKAKLEDIDWEVQNKPKIED*
Ga0113563_108173002	3300009167	Freshwater Wetlands	MPKALVMGIRVRLRDEVFRDMRVRDWQFSGMEKGRLVLWRPEGLVLRVKLEDIDWEDHNKPKIED*
Ga0113563_121183532	3300009167	Freshwater Wetlands	VNEAISIPKVIVMGTRVRLRNEALKDMRVRDWQFSGVEKGKLVLWRPEGLILRVKLEDIDWEIHNKPKIED*
Ga0116137_10708902	3300009549	Peatland	MNEAISFPKAMAMGARVQLKNEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIEWEVHNKPKIED*
Ga0116104_10498222	3300009614	Peatland	MNEAISFPKAMAMGARVQLKSEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIEWEVHNKPKIED*
Ga0116103_11233071	3300009615	Peatland	MNEAISFPKAMAMGARVQLKSEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKARLEDIDWEVHDKPKIED*
Ga0116127_10711951	3300009618	Peatland	MNEAISFPKAMAMGARVQLKNEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIDWEVHKKPKIED*
Ga0074046_107059651	3300010339	Bog Forest Soil	MNEAISFPKAIAMGTKVQLKNEAFKDMKVREWQFSGVEKGKIVLSRPEGFILKVKLEDIDWEVHNKPKIED*
Ga0153915_102755752	3300012931	Freshwater Wetlands	VKEGLSFPKAIVIGTKVRLRNEAFKDMRVREWRFSGVEKGKLVLFRPEGHILRVEFEDIDWKGQNKSKVED*
Ga0153915_106496692	3300012931	Freshwater Wetlands	VNQAISIPKALAIGTRVRLRDEAFKDMRARDWHFSGVEKGKLVLWRPEGRFIRVKLEDIDWEVHNKPKIED*
Ga0153915_111344663	3300012931	Freshwater Wetlands	MGTKVQLRNEALKDIKIREWEFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0153915_111487161	3300012931	Freshwater Wetlands	MALLFWEGITLGRRRIVNEALSFPRAIVMGTKVRLRNEACKDMRIREWRFSGIEKGKLVLFRPEGHILRVEFEDIDWKEQNKPKIED
Ga0153915_111725012	3300012931	Freshwater Wetlands	MNEAISIPKAIVMGTRVRLRNEAFRDMRVRDWQFSGVEKGKLVLWRPEGLILRVKWEDIDWEV
Ga0153915_116708462	3300012931	Freshwater Wetlands	VASLRDKAKAGSKVRLRNEAFRDMRVREWRFSGVEKGKVVLFRPEGHILRVEFEEIDWKEQDKTKVED*
Ga0153915_118246852	3300012931	Freshwater Wetlands	MGTRVRLRNEAFSDMRVRDWQFSGIEKGKLILWHPEGLILRVNLEDIDWEVLKKDGWNQRT*
Ga0153915_119114612	3300012931	Freshwater Wetlands	VNEALSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGIEKGNLVLFRPEGHILRVEFEDIEWKEQDKPKIED*
Ga0153915_132109531	3300012931	Freshwater Wetlands	MEEALSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGVERGKLVLFRPEGHILRVEFEDIDWKELNKPKVED*
Ga0153915_135554762	3300012931	Freshwater Wetlands	VNEAIYLPKAIVMGTKVRLRKEAFKDMRFREWRFSEVEEGKLVLFRPEGLILKVEFEDID
Ga0153916_101294631	3300012964	Freshwater Wetlands	MGTRVRLRNEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEIHNKP
Ga0153916_105256303	3300012964	Freshwater Wetlands	VNEAISIPKVIVMGTRVRLRNEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEVRNKPKIED*
Ga0153916_108550933	3300012964	Freshwater Wetlands	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWEFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED*
Ga0153916_116435822	3300012964	Freshwater Wetlands	MALLFWEGITLGRRRIVNEALSFPRAIVMGTKVRLRNEACKDMRIREWRFSGIEKGKLVLFRPEGHILRVEFEDIDWKGQNKSKVED*
Ga0153916_123644101	3300012964	Freshwater Wetlands	VKEAFSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGIEKGNLVLFRPEGHILRVEFEDIEWKEQDKPKIED*
Ga0187849_10057561	3300017929	Peatland	MNEAISFPKAMAMGARVQLKNEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIEWEVHNKPKIED
Ga0187877_10238771	3300017931	Peatland	MNEAISFPKAMAMGARVQLKSEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIEWEVHNKPKIED
Ga0187775_100335883	3300017939	Tropical Peatland	VNEVISFPKAILMGTKVQLRNEAFKDVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNEPKIED
Ga0187874_101578792	3300018019	Peatland	MNEAISFPKAMAMGARVQLKNEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIDWEVHKKPKIED
Ga0187881_100085103	3300018024	Peatland	MAMGARVQLKNEAFKDMKIREWQFSGVEKGKIVLSRPEGLILKVKLEDIEWEVHNKPKIE
Ga0187774_100244913	3300018089	Tropical Peatland	VDEVISFPKAILMGTKVQLRNEAFKDVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNEPKIED
Ga0224495_102982492	3300022208	Sediment	VKEAFSFPKAIVMGTKVRLRNEACKDMRVREWRFSGIEKGKLVLFRPEGHILRVEFEDIDWKEQNKPKIED
(restricted) Ga0233425_100380072	3300024054	Freshwater	VDNAISFPKAIVMGAKVRLRNEAFKGVRIREWRFSGVEKGKLVLFLPEGTVLTARFEDIDWEAQNRPKIED
Ga0124853_10640423	3300024056	Freshwater Wetlands	MGTKVRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRVQFEDIDWEDQNRPKIED
Ga0207826_10620431	3300027680	Tropical Forest Soil	VDEAISFPKAIVMGKKVRLRDDAFRDMKIRDWRFSGVEKGKLVLLRPEGHILKVNFEDINWEIQNRPKIED
Ga0209164_10445642	3300027690	Enrichment Culture	VNEAISMSKAIVMGARVRLRKEAFKDVKARDWQFSGVEKGKLVLWRPEGLILRAKLEDIDWEVHNEPKIED
Ga0209164_10644873	3300027690	Enrichment Culture	LRNEAFKNMRVREWRFSGIEKGKLVLFQPEGHILRVEFGDIDWKEQDKPKVEN
Ga0256868_101890952	3300027811	Soil	VNEAISFPKAIVMGTKVQLRNEAFKDMKVRTWQFSGVEKGKLVLSLPEGLILRVKCEDIDWEVHNKPKIED
Ga0209293_100816281	3300027877	Wetland	VNEMLSFPKAILMGTKVQLRGEAFKDVKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0209293_101235962	3300027877	Wetland	VNEVLSFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDRGKLVLSRPEGLILKVKFDDIDWKNHNKPKIED
Ga0209293_106728612	3300027877	Wetland	MGTKVRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRFQFEDIDWEDQNRPKIED
Ga0208980_105060411	3300027887	Wetland	EAISFPKAIVMGTKVRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRVQFEDIDWEDQNRPKIED
Ga0209253_100249571	3300027900	Freshwater Lake Sediment	VNEVLSFPKAILMGTKVQLRNEAFKDVKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0209536_1000337673	3300027917	Marine Sediment	MGTKVQLRNEAFRDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNEPKIKD
(restricted) Ga0233418_102947862	3300027995	Sediment	VNEMLSFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNPNKPKI
Ga0214473_110622171	3300031949	Soil	VNEAISISKAIVMGTRVRLRNEAFGDLRVRDWQFSGMEKGKLVLWRPEGLILRVKLEDIDWEVHNNPKIED
Ga0335071_115733712	3300032897	Soil	VEEAIPFPRAIVMGTKVRLRNEAFKEMRVREWRFSGVEKGRLILFLPEGLILKAQFEDIDWEVQNRPKIED
Ga0335071_120824281	3300032897	Soil	MNEEISSPKAIVMGTKVRLRNEAFKDIRAREWRFSGVERGKLVLFRPEGFILRVQFEDIDWEAHNKPKIED
Ga0316603_105784711	3300033413	Soil	VNEVASFPKAILMGTKVQLRDETFKDVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWTNHNKAKIED
Ga0316619_102094832	3300033414	Soil	VNEAFSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGIEKGKLVLFRPEGHILRVEFEDIDWKGQNKSKVED
Ga0316619_106521222	3300033414	Soil	VNQAVAMPKALVMGIRVRLRDEVFRDMRVRDWQFSGMEKGRLVLWRPEGLVLRVKLEDIDWEDHNKPKIED
Ga0316619_106886062	3300033414	Soil	VNEVASFPKAILMGTKVQLRKETFKEVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWTNHNKAKIED
Ga0316601_1015120512	3300033419	Soil	MNETISFPKAIAMGTKVQLKNKAFKDMWVREWQFSGVEKGKIVLSRPGGLILKAKLEDIDWEVQNKPKIED
Ga0326726_1000255614	3300033433	Peat Soil	VNEVIAFPKAILMGTKVQLRNEAFKDIKFREWQFSGVDKGKLVLSRPDGLVLKVKLEDIDWKNHNKPKIED
Ga0326726_115308641	3300033433	Peat Soil	AISFPKAIAMGTKIQLKNEVFKDMTVREWQFSGVEKGKIVLSRPEGLILKVKLDDFGWEVHNKPQIED
Ga0326726_117894361	3300033433	Peat Soil	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPDGLILKVKLEDIDWKNHNK
Ga0316613_104220423	3300033434	Soil	VNEVASFPKAILMGTKVQLRKETFKEVKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWTNHNKAKIESSK
Ga0316620_102179513	3300033480	Soil	VNEALSFPRAIVMGTKVRLRNEACKDMRIREWRFSGIEKGKLVLFRPEGHILRVEFEDIDWKEQNKPKIED
Ga0316620_102970563	3300033480	Soil	VRLRNEAFKDMRVREWRFSGVEEGKLVLFRPEGRILRVEFEDIDWKEQNKPKIED
Ga0316620_103798902	3300033480	Soil	VASLRDKAKAGSKVRLRNEAFRDMRVREWRFSGVEKGKVVLFRPEGHILRVEFEEIDWKEQDKTKVED
Ga0316620_104939812	3300033480	Soil	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWEFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0316620_105429791	3300033480	Soil	VNEAISIPKVIVMGTRVRLRNEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEIHNKPKIED
Ga0316620_105642391	3300033480	Soil	VNEAISLPKAIVMGTRVRLRNEAFRDMNVRNWQFSGIEKGKLVLWHPGGLILRVKLEDIDWEV
Ga0316620_111461343	3300033480	Soil	VNEAISFPKAIVMGTKVQLRNEAFKDMKVRTWQFSGVEKGKLVLSRPEGLILRVKCEDIDWEVHNKPKI
Ga0316620_117795151	3300033480	Soil	VNEALSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGIEKGNLVLFRPEGHILRVEFEDIEWKEQDKPKIED
Ga0316626_111955102	3300033485	Soil	TKVQLKNKAFKDMWVREWQFSGVEKGKIVLSRPGGLILKAKLEDIDWEVQNKPKIED
Ga0316624_102058563	3300033486	Soil	VNEAISLPKAIVMGTRVRLRNEAFRDMNVRNWQFSGIEKGKLVLWHPGGLILRVKLEDIDWEVFNKPKIED
Ga0316624_111747282	3300033486	Soil	MNEAISIPKAIVMGTRVRLRNEAFRDMRVRDWQFSGMEKGKLVLWRPEGLILRVKSEDIDWEVHNKLKIED
Ga0316624_113994981	3300033486	Soil	VKEGLSFPKAMVIGTKVRLRNEAFKDMRVREWRFSGVEKGKLVLFRPEGHILRVEFEDIDWKEQNKPKIED
Ga0316624_122389022	3300033486	Soil	VNQAVAMPKALVMGIRVRLRDEVFRDMRVRDWQFSGMEKGRLVLWRPEGLILRVKLEDIDWEVRNKPKIED
Ga0316630_100090966	3300033487	Soil	MLSFPKAILMGTKVQLRGEAFKDVKIREWQFSGVDRGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0316630_113199371	3300033487	Soil	MNETISFPKAIAMGTKVQLKNKAFKDMWVREWQFSGVEKGKIVLSRPEGLILKAKFEDIDWEVQNKPKIED
Ga0316631_101015732	3300033493	Soil	VNEAISIPKAIVMGTRVRLRNEVFRDMRVRDWQFSGVEKGRLVLWRPEGLILRVKLEDIDWEIHNKPKIED
Ga0316628_1002169432	3300033513	Soil	VNQAISIPKALAMGTRVRLRDEAFKDMRARDWHFSGVEKGKLVLWRPEGRFIRVKLEDIDWEVHNKPKIED
Ga0316628_1009432163	3300033513	Soil	VNEAISIPKVIVMGTRVRLRNEAFRDMRVRDWQFSGVEKGKLVLWRPEGLILRVKWEDIDWEVHNKPKIED
Ga0316628_1011089513	3300033513	Soil	VNEAISIPKAIVLGTRVRLRNEAFKDIRARDWHFSGVEKGKLVLWRPEGRFLRVKLEDIDWEVHNKPKSED
Ga0316628_1015332712	3300033513	Soil	VNEVISFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0316628_1015613241	3300033513	Soil	VKEAFSFPKAIVMGTKVRLRNEAFKDMRVREWRFSGIEKGNLVLFRPEGHILRVEFEDIEWKEQDKPKIED
Ga0316628_1025688541	3300033513	Soil	IAMGTKVRLRNEAFKEMRVREWRFSGVEKGELVLFLPEGLILRVQFEDIDWEVQNRPKIE
Ga0316628_1038636411	3300033513	Soil	LPKAIVMGTKVRLRKEAFKDMRFREWRFSEVEEGKLVLFRPEGLILKVEFEDIDWDFHNKPKIED
Ga0316617_1010950001	3300033557	Soil	MGTKIRLKNEVFREMKDRDWRFSGVEKRKLVLFLPEGLILRVQFEDIDWEDQNRPKIED
Ga0314861_0195689_541_756	3300033977	Peatland	MSEAISYPKAIVMGTKVRLKNEAFKDLKVREWQFSGIERGKIILTRPEGLIVRVKLEDIDWEIRNKPKIED
Ga0334965_0125749_428_646	3300033991	Sediment	MMNEAISIPKAIVMGTRVRLRNEAFRDMRVRDWQFSGMEKGKLVLWRPEGLILRVKLEDIDWEAHNKPKIED
Ga0373900_094190_79_294	3300034078	Sediment Slurry	VNEVISFPRAILMGTKVQLRNEAFKDIKIREWEFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED
Ga0373901_017690_1020_1235	3300034083	Sediment Slurry	VNEVIFFPKAILMGTKVQLRNEAFKDIKIREWQFSGVDKGKLVLSRPEGLILKVKLEDIDWKNHNKPKIED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters