Basic Information | |
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Family ID | F095713 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 126 residues |
Representative Sequence | MLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA |
Number of Associated Samples | 79 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 52.38 % |
% of genes near scaffold ends (potentially truncated) | 49.52 % |
% of genes from short scaffolds (< 2000 bps) | 90.48 % |
Associated GOLD sequencing projects | 71 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (61.905 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.857 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.905 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (60.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 52.31% Coil/Unstructured: 47.69% | Feature Viewer |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF13468 | Glyoxalase_3 | 35.24 |
PF02776 | TPP_enzyme_N | 35.24 |
PF13458 | Peripla_BP_6 | 4.76 |
PF01522 | Polysacc_deac_1 | 0.95 |
PF02653 | BPD_transp_2 | 0.95 |
PF00005 | ABC_tran | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG0726 | Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family | Cell wall/membrane/envelope biogenesis [M] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 61.90 % |
Unclassified | root | N/A | 38.10 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000956|JGI10216J12902_103956613 | Not Available | 537 | Open in IMG/M |
3300004114|Ga0062593_100572854 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1069 | Open in IMG/M |
3300004114|Ga0062593_100845857 | All Organisms → cellular organisms → Bacteria | 917 | Open in IMG/M |
3300004156|Ga0062589_100631854 | All Organisms → cellular organisms → Bacteria | 936 | Open in IMG/M |
3300004156|Ga0062589_102310049 | Not Available | 553 | Open in IMG/M |
3300004480|Ga0062592_100432173 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1061 | Open in IMG/M |
3300004480|Ga0062592_102526442 | Not Available | 517 | Open in IMG/M |
3300004808|Ga0062381_10012087 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum | 2081 | Open in IMG/M |
3300005093|Ga0062594_101738608 | Not Available | 654 | Open in IMG/M |
3300005093|Ga0062594_102206428 | Not Available | 596 | Open in IMG/M |
3300005289|Ga0065704_10581734 | Not Available | 617 | Open in IMG/M |
3300005294|Ga0065705_10827812 | All Organisms → cellular organisms → Bacteria | 597 | Open in IMG/M |
3300005295|Ga0065707_10249665 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1129 | Open in IMG/M |
3300005295|Ga0065707_10404506 | All Organisms → cellular organisms → Bacteria | 849 | Open in IMG/M |
3300005328|Ga0070676_10276584 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1130 | Open in IMG/M |
3300005336|Ga0070680_100173362 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1816 | Open in IMG/M |
3300005343|Ga0070687_100066004 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1926 | Open in IMG/M |
3300005345|Ga0070692_11162747 | Not Available | 548 | Open in IMG/M |
3300005438|Ga0070701_10327535 | Not Available | 950 | Open in IMG/M |
3300005440|Ga0070705_100750345 | Not Available | 772 | Open in IMG/M |
3300005441|Ga0070700_100755339 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 779 | Open in IMG/M |
3300005441|Ga0070700_101256111 | All Organisms → cellular organisms → Bacteria | 621 | Open in IMG/M |
3300005444|Ga0070694_100519583 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 950 | Open in IMG/M |
3300005444|Ga0070694_100592398 | All Organisms → cellular organisms → Bacteria | 892 | Open in IMG/M |
3300005457|Ga0070662_100440641 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1080 | Open in IMG/M |
3300005530|Ga0070679_100923824 | All Organisms → cellular organisms → Bacteria | 816 | Open in IMG/M |
3300005544|Ga0070686_101223029 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 625 | Open in IMG/M |
3300005546|Ga0070696_100785625 | Not Available | 783 | Open in IMG/M |
3300005718|Ga0068866_10690321 | Not Available | 699 | Open in IMG/M |
3300005719|Ga0068861_101656810 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 632 | Open in IMG/M |
3300005844|Ga0068862_101969103 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 595 | Open in IMG/M |
3300006196|Ga0075422_10248804 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 747 | Open in IMG/M |
3300006844|Ga0075428_100417054 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1438 | Open in IMG/M |
3300006845|Ga0075421_100869496 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1031 | Open in IMG/M |
3300006845|Ga0075421_102622660 | Not Available | 522 | Open in IMG/M |
3300006846|Ga0075430_100228401 | All Organisms → cellular organisms → Bacteria | 1543 | Open in IMG/M |
3300006846|Ga0075430_101128098 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 646 | Open in IMG/M |
3300006846|Ga0075430_101467113 | Not Available | 560 | Open in IMG/M |
3300006847|Ga0075431_100522433 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1176 | Open in IMG/M |
3300006853|Ga0075420_100619000 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 934 | Open in IMG/M |
3300006853|Ga0075420_100725835 | Not Available | 856 | Open in IMG/M |
3300006853|Ga0075420_100814672 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 804 | Open in IMG/M |
3300006876|Ga0079217_11222431 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 573 | Open in IMG/M |
3300006880|Ga0075429_101015100 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 725 | Open in IMG/M |
3300006894|Ga0079215_10480124 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 767 | Open in IMG/M |
3300006969|Ga0075419_10778979 | Not Available | 683 | Open in IMG/M |
3300006969|Ga0075419_11415384 | Not Available | 519 | Open in IMG/M |
3300006969|Ga0075419_11419124 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense | 519 | Open in IMG/M |
3300007004|Ga0079218_12447615 | Not Available | 615 | Open in IMG/M |
3300007004|Ga0079218_12891626 | Not Available | 577 | Open in IMG/M |
3300009094|Ga0111539_10383364 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1637 | Open in IMG/M |
3300009094|Ga0111539_10391376 | All Organisms → cellular organisms → Bacteria | 1619 | Open in IMG/M |
3300009094|Ga0111539_10949871 | All Organisms → cellular organisms → Bacteria | 1000 | Open in IMG/M |
3300009100|Ga0075418_13167962 | Not Available | 501 | Open in IMG/M |
3300009148|Ga0105243_11602814 | All Organisms → cellular organisms → Bacteria | 677 | Open in IMG/M |
3300009156|Ga0111538_10201914 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 2522 | Open in IMG/M |
3300009156|Ga0111538_12440042 | Not Available | 656 | Open in IMG/M |
3300010399|Ga0134127_10205195 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum | 1836 | Open in IMG/M |
3300010400|Ga0134122_10440527 | All Organisms → cellular organisms → Bacteria | 1162 | Open in IMG/M |
3300010403|Ga0134123_10068575 | All Organisms → cellular organisms → Bacteria | 2725 | Open in IMG/M |
3300012905|Ga0157296_10183781 | Not Available | 654 | Open in IMG/M |
3300012907|Ga0157283_10018288 | All Organisms → cellular organisms → Bacteria | 1290 | Open in IMG/M |
3300012910|Ga0157308_10212736 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 660 | Open in IMG/M |
3300012911|Ga0157301_10316080 | Not Available | 576 | Open in IMG/M |
3300012914|Ga0157297_10050914 | All Organisms → cellular organisms → Bacteria | 1084 | Open in IMG/M |
3300014326|Ga0157380_13211701 | Not Available | 522 | Open in IMG/M |
3300015201|Ga0173478_10115534 | Not Available | 1014 | Open in IMG/M |
3300015371|Ga0132258_10741045 | Not Available | 2475 | Open in IMG/M |
3300018469|Ga0190270_10778397 | All Organisms → cellular organisms → Bacteria | 960 | Open in IMG/M |
3300018469|Ga0190270_10887048 | Not Available | 908 | Open in IMG/M |
3300018469|Ga0190270_13408333 | Not Available | 504 | Open in IMG/M |
3300018481|Ga0190271_10426338 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1426 | Open in IMG/M |
3300019361|Ga0173482_10532622 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 577 | Open in IMG/M |
3300019362|Ga0173479_10297440 | Not Available | 734 | Open in IMG/M |
3300021280|Ga0213900_101754 | All Organisms → cellular organisms → Bacteria | 904 | Open in IMG/M |
3300025899|Ga0207642_10561689 | Not Available | 706 | Open in IMG/M |
3300025907|Ga0207645_10678580 | Not Available | 700 | Open in IMG/M |
3300025908|Ga0207643_10320815 | Not Available | 967 | Open in IMG/M |
3300025908|Ga0207643_10544624 | All Organisms → cellular organisms → Bacteria | 744 | Open in IMG/M |
3300025918|Ga0207662_10126926 | Not Available | 1605 | Open in IMG/M |
3300025937|Ga0207669_10061872 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2303 | Open in IMG/M |
3300025938|Ga0207704_10093361 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1983 | Open in IMG/M |
3300026075|Ga0207708_10583038 | All Organisms → cellular organisms → Bacteria | 946 | Open in IMG/M |
3300026075|Ga0207708_10684772 | Not Available | 875 | Open in IMG/M |
3300026089|Ga0207648_11117788 | Not Available | 739 | Open in IMG/M |
3300027907|Ga0207428_10595552 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum | 797 | Open in IMG/M |
3300027909|Ga0209382_10464209 | All Organisms → cellular organisms → Bacteria | 1400 | Open in IMG/M |
3300027909|Ga0209382_10736080 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1057 | Open in IMG/M |
3300028380|Ga0268265_10075414 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 2641 | Open in IMG/M |
3300028587|Ga0247828_10325992 | Not Available | 857 | Open in IMG/M |
3300028587|Ga0247828_10970331 | Not Available | 553 | Open in IMG/M |
3300028608|Ga0247819_10458868 | Not Available | 746 | Open in IMG/M |
3300028812|Ga0247825_10213866 | All Organisms → cellular organisms → Bacteria | 1334 | Open in IMG/M |
3300028812|Ga0247825_11219486 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 549 | Open in IMG/M |
3300031184|Ga0307499_10053590 | Not Available | 996 | Open in IMG/M |
3300031226|Ga0307497_10000359 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 10524 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1199909 | Not Available | 505 | Open in IMG/M |
3300031547|Ga0310887_10009215 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 3542 | Open in IMG/M |
3300031858|Ga0310892_11025400 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 582 | Open in IMG/M |
3300032002|Ga0307416_100462742 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1324 | Open in IMG/M |
3300032012|Ga0310902_10800915 | Not Available | 642 | Open in IMG/M |
3300032157|Ga0315912_10125331 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2012 | Open in IMG/M |
3300033550|Ga0247829_10014418 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 4788 | Open in IMG/M |
3300033550|Ga0247829_10475432 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1033 | Open in IMG/M |
3300033551|Ga0247830_10765431 | All Organisms → cellular organisms → Bacteria | 768 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 22.86% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 15.24% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 10.48% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 9.52% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 7.62% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.71% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.81% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.86% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.86% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.86% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.86% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.90% |
Wetland Sediment | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.95% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.95% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.95% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300004808 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
3300012910 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2 | Environmental | Open in IMG/M |
3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
3300021280 | Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Shaw_3 | Environmental | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
3300028608 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
3300032157 | Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil | Environmental | Open in IMG/M |
3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI10216J12902_1039566132 | 3300000956 | Soil | MLKLVFAQTGPSQTAEVGPLPEICIDGETLRATRGGEVLGRHHKHEWIVHGRSFFRVDCSCPARVHFENGDGASSEVFGPFLHFSCADGIAYGDGDICASIDLETRQWYCHRDQKYWHTLVVKSAAAPAA* |
Ga0062593_1005728542 | 3300004114 | Soil | MLKLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQRYWDTIVVKSAAAPAA* |
Ga0062593_1008458572 | 3300004114 | Soil | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICAN |
Ga0062589_1006318541 | 3300004156 | Soil | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDL |
Ga0062589_1023100492 | 3300004156 | Soil | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICANIDL |
Ga0062592_1004321732 | 3300004480 | Soil | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENQEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0062592_1025264422 | 3300004480 | Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYW |
Ga0062381_100120872 | 3300004808 | Wetland Sediment | MLKLVFAQTGPSQTHELGPLPAVRIDGETMRAERGGEVLARHQRHAWTVQAREFFRVDCACPVKIHFENEEGESSAVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWQWMVVKSAAAPAA* |
Ga0062594_1017386082 | 3300005093 | Soil | GRAAQVGHKMCKVIQAELAERRALSIGNVHADGNNTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0062594_1022064282 | 3300005093 | Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQW |
Ga0065704_105817341 | 3300005289 | Switchgrass Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRSLVV |
Ga0065705_108278121 | 3300005294 | Switchgrass Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDL |
Ga0065707_102496653 | 3300005295 | Switchgrass Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYW |
Ga0065707_104045062 | 3300005295 | Switchgrass Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWQAMVVKSAAAPAA* |
Ga0070676_102765842 | 3300005328 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA* |
Ga0070680_1001733622 | 3300005336 | Corn Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA* |
Ga0070687_1000660042 | 3300005343 | Switchgrass Rhizosphere | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPFMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070692_111627472 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | PSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070701_103275351 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070705_1007503451 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | RAAQVGHKMCKVIQAELAERRALSIGNVHADGNNTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070700_1007553392 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070700_1012561111 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANID |
Ga0070694_1005195831 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | AQVGHKMCKVIQAELAERRALSIGNVHADGNNTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCSCPVKIHFETGGESSEVFGPFMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070694_1005923982 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQRYWDTIVVKSAAAPAA* |
Ga0070662_1004406411 | 3300005457 | Corn Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDG |
Ga0070679_1009238241 | 3300005530 | Corn Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPA |
Ga0070686_1012230291 | 3300005544 | Switchgrass Rhizosphere | GETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0070696_1007856251 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | GPGGLARDFVVRYRRDREAELLPHRGRAAQVGHKMCKVIQAELAERRALSIGNVHADGNNTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0068866_106903211 | 3300005718 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRS |
Ga0068861_1016568101 | 3300005719 | Switchgrass Rhizosphere | RADRQVGGGATGIAVLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0068862_1019691031 | 3300005844 | Switchgrass Rhizosphere | MLKLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQ |
Ga0075422_102488041 | 3300006196 | Populus Rhizosphere | GETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDICANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA* |
Ga0075428_1004170543 | 3300006844 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYADGGICANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0075421_1008694961 | 3300006845 | Populus Rhizosphere | MLKLVFAEAGPSSTVELGPLPEICIDGETMRAARGGEVLGRHHRHEWIVQGRKFFRVDCSCPAKVHFENPQGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKKWYCHRDQKYWHSLVVKSAAAPAA* |
Ga0075421_1026226601 | 3300006845 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEILIDGETMRATRDGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWHTLVVKSAAAPAA* |
Ga0075430_1002284013 | 3300006846 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0075430_1011280982 | 3300006846 | Populus Rhizosphere | MLELVFAEAGLSSTVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDSSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQ |
Ga0075430_1014671132 | 3300006846 | Populus Rhizosphere | MLKLVFAEAGPSSTVEVGPLPEICIDGETLRATRGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENPKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKKWYCHRDQKYWHSLVVKSAAAPAA* |
Ga0075431_1005224332 | 3300006847 | Populus Rhizosphere | EVGPLPEICIDGETLRATRGGEVLGRHHKHEWIVHGRSFFRVDCSCPARVHFENGDGASSEVFGPFLHFSCADGIAYGDGDICASIDLETRQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0075420_1006190003 | 3300006853 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEILIDGETMRATRDGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0075420_1007258352 | 3300006853 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFESRKGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0075420_1008146722 | 3300006853 | Populus Rhizosphere | MLELVFAEAGLSSTVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDSSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA* |
Ga0079217_112224312 | 3300006876 | Agricultural Soil | FRDQAPTMLELIFAEAGLSSTVDVGPLPEVRIDGETIRDPRDGKVLGRHERHQWRVGGRDFFRVDCSCLVKVHFENEAGESSEIYGPFLHFSCADGIAYGDGDICANIDLESKKWYCHRDEKYWQSLVVKSAAAPAA* |
Ga0075429_1010151002 | 3300006880 | Populus Rhizosphere | MLELVFAEAGLSSTVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDSSEIYGPFLHFSCADGIAYGDGDICANIDL |
Ga0079215_104801242 | 3300006894 | Agricultural Soil | MLELVFAEAGLSSTVNVGPLPEVRIDGKAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGESSEIYGPFLHFSCADGIAYGDGEICANIDLDSKKWYCHRDQSYWQAMVVKSAAAPAA* |
Ga0075419_107789792 | 3300006969 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEILIDGETMRATRDGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWDTLVV |
Ga0075419_114153842 | 3300006969 | Populus Rhizosphere | MLKLVFAEAGPSSTVEVGPLPEICIDGETLRATRGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENPKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKRWYCHRDQKYWHTLVVKSAAAPAA* |
Ga0075419_114191241 | 3300006969 | Populus Rhizosphere | LLARADRQVGGGAAAIAMLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFESRKGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA* |
Ga0079218_124476152 | 3300007004 | Agricultural Soil | MLQLVFAEAGLSSTVEVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDASEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA* |
Ga0079218_128916262 | 3300007004 | Agricultural Soil | MLQLVFAEASLSSTVDVGPLPEVRIDGETSATRVTARFSGRHERHQWRVGGRDFFRVDCSCLVRPFLHFSCADGIAYGDGDICANIDLESKKWYCHRDEKYWQSLVVKSAAAPAA* |
Ga0111539_103833643 | 3300009094 | Populus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDMETKQWYCHRDQKYWQAMVVKSAAAPAA* |
Ga0111539_103913762 | 3300009094 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRARHGGEILARHQKHEWTVRGRKFFRVDCSCPVKIHFETGGESSEVYGPFMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0111539_109498712 | 3300009094 | Populus Rhizosphere | MLKLVFAQTGPSQTTEVGPLPAIRIDGETMRASRGSEILARHRQHEWTVHGQNFFRVDCACPVKIHFENGEGESSEVLGPFLHFSCADGIAYGDGGICANIDMETKQWYCHRDQKYWQSMVVRSAAAPAG* |
Ga0075418_131679621 | 3300009100 | Populus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRS |
Ga0105243_116028141 | 3300009148 | Miscanthus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0111538_102019144 | 3300009156 | Populus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANI |
Ga0111538_124400421 | 3300009156 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRARHGGEILARHQKHEWTVRGRKFFRVDCSCPVKIHFETAGESSEVYGPFMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0134127_102051952 | 3300010399 | Terrestrial Soil | MLKLVFAEAGPSPTVEIGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0134122_104405271 | 3300010400 | Terrestrial Soil | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICASIDLETKQWYCHR |
Ga0134123_100685752 | 3300010403 | Terrestrial Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDICANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA* |
Ga0157296_101837812 | 3300012905 | Soil | IQAELAERRALSIGNVHADGNNTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0157283_100182881 | 3300012907 | Soil | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAA |
Ga0157308_102127361 | 3300012910 | Soil | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQRYWDTIVVKSAAAPAA* |
Ga0157301_103160801 | 3300012911 | Soil | KLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0157297_100509141 | 3300012914 | Soil | EAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0157380_132117011 | 3300014326 | Switchgrass Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAKHGGEILARHQKHEWTVHGRKFFRVDCSCPVKIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQRYWDTIVVKSAAAPAA* |
Ga0173478_101155342 | 3300015201 | Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0132258_107410453 | 3300015371 | Arabidopsis Rhizosphere | VLKLVFAEAGPSPTVEVGPLPAICVDGETMRATHGGEILARHHKHEWILHGRTFFRVDCSCPVKIHFETGGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA* |
Ga0190270_107783972 | 3300018469 | Soil | MLELVFAEAGLSSTVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDASEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQ |
Ga0190270_108870481 | 3300018469 | Soil | AEAGLSSTVEVGPLPEVRIDGEAIRNPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGESSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA |
Ga0190270_134083332 | 3300018469 | Soil | VLRLVFAEAGPSQTVELGPLPEIRVDGETLRATRGSEVLGRHDRHAWSVRGRKFFRLDCSCPVKIHFENQPGESSEVFGPFLHFSCADGIAYGDGGICANIDLESKQWYCHRDQHYWQAMVAKSAAAPAA |
Ga0190271_104263382 | 3300018481 | Soil | MLQLVFAEAGLSSTVEVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGESSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA |
Ga0173482_105326221 | 3300019361 | Soil | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGMRPP |
Ga0173479_102974402 | 3300019362 | Soil | PTVEVGPLPEICVDGETMRAKHGGEVLARHQKHEWSVHGRKFFRVDCACPVKIHFENGKDESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA |
Ga0213900_1017542 | 3300021280 | Soil | MLQLVFAEAGLSSTVEVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGDASEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA |
Ga0207642_105616891 | 3300025899 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKY |
Ga0207645_106785801 | 3300025907 | Miscanthus Rhizosphere | AEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA |
Ga0207643_103208152 | 3300025908 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA |
Ga0207643_105446242 | 3300025908 | Miscanthus Rhizosphere | MLKLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYCHRDQRYWDTIVVKSAAAPAA |
Ga0207662_101269262 | 3300025918 | Switchgrass Rhizosphere | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPFMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA |
Ga0207669_100618722 | 3300025937 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHRQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA |
Ga0207704_100933611 | 3300025938 | Miscanthus Rhizosphere | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYRHR |
Ga0207708_105830381 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA |
Ga0207708_106847721 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCSCPANVHFENGQGESSEVFGPFMHFSCADGIACGDGG |
Ga0207648_111177882 | 3300026089 | Miscanthus Rhizosphere | VLRLVFAEAGPSPTVEVGPLPEICVDGETMRATRGGEILARHHQHEWTVHGRKFFRVDCACPANVHFENGQGESSEVFGPLMHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWRSMVVKSAAAPAA |
Ga0207428_105955522 | 3300027907 | Populus Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEIVARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDMETKQWYCHRDQKYWQAMVVKSAAAPAA |
Ga0209382_104642091 | 3300027909 | Populus Rhizosphere | MLKLVFAEAGPSSTVELGPLPEICIDGETMRAARGGEVLGRHHRHEWIVQGRKFFRVDCSCPAKVHFENPQGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKKWYCHRDQKYWHSLVVKSAAAPAA |
Ga0209382_107360803 | 3300027909 | Populus Rhizosphere | MLKLVFAEAGPSPTVEVGPLPEICIDGETMRAARGGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGVCANIDLETKQWYCHRDQKYWDTLVVKSAAAPAA |
Ga0268265_100754142 | 3300028380 | Switchgrass Rhizosphere | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWQAMVVKSAAAPAA |
Ga0247828_103259922 | 3300028587 | Soil | MLKLVFAEAGPSPTVEVGPLPEIRIDGETMRATRDGEVLGRHHKHEWIVQGRKFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQKYWHTLVVKSAAAPAA |
Ga0247828_109703311 | 3300028587 | Soil | STVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGELSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA |
Ga0247819_104588681 | 3300028608 | Soil | MLKLVFAVAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQWYCHR |
Ga0247825_102138662 | 3300028812 | Soil | MLQLVFAEAGLSSTVEVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGELSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAPAA |
Ga0247825_112194861 | 3300028812 | Soil | MLKLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETKQWYC |
Ga0307499_100535902 | 3300031184 | Soil | AELLPHCRRAAQVGHKMCKVIQAKLAQWRALSFGYVHPDGNSTFPSQAPAMLKLVFAEAGPSPTVEVGPLPEICVDGETMRAAHGGEILARHQKHEWIVHQRKFFRVDCACPVKIHFENREGESSEVYGPFLHFSCADGIAYGDGGICANIDLETKQWYCHHDQKYWASMVVKSAAAPAA |
Ga0307497_1000035912 | 3300031226 | Soil | MLKLVFAEAGPSPTVEVGPLPEICVDGETMRAAHGGEILARHQKHEWIVHQRKFFRVDCACPVKIHFENREGESSEVYGPFLHFSCADGIAYGDGGICANIDLETKQWYCHHDQKYWASMVVKSAAAPAA |
(restricted) Ga0255312_11999092 | 3300031248 | Sandy Soil | SQTAEVGPLPAICVDGETMRAAHGGEILARHHKHEWIVQGQKFFRVDCSCPAKIHFENEKGESSEVYGPFLHFSCADGIAYGDGAICANIDLETKQWYCHRDQKYWPSMVVKSAAAPAE |
Ga0310887_100092151 | 3300031547 | Soil | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETK |
Ga0310892_110254001 | 3300031858 | Soil | MLKLVFAQTGPSQTAEVGPLPEITIDGETMRAARGGEILARHRRHEWTVHGRNFFRVDCSCPVRIHFENHEGESSEVLGPFLHFSCADGIAYGDGGICANIDLETKQWYCHRDQ |
Ga0307416_1004627422 | 3300032002 | Rhizosphere | MLNLVFAEAGPSSTLDIGPLPEVRIDGEILRASPGGEILGRHDRHAWRVRGREFFRVDCSCMVKLHFENDGGETSEVYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAAAAA |
Ga0310902_108009151 | 3300032012 | Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDVCANIDLESKQ |
Ga0315912_101253311 | 3300032157 | Soil | MLQLVFAEAGLSSTVEVGPLPEVRIDGEAIRDPRDGKVLGRHERHTWRVRGRDFFRLDCSCLVKVHFENEAGESSGVYGPFLHFSCADGIAYGDGEICANIDL |
Ga0247829_100144183 | 3300033550 | Soil | MLKLVFAEAGPSPTMEIGPLPEICIDGETLRAARDGEVLGRHHQQEWIVHGRKFFRVDCSCPAKVHFENEKGESSEVFGPFLHFSCADGIAYGDGDICANIDLESKQWYCHRDRKYWRSLVVKSAAAPAA |
Ga0247829_104754322 | 3300033550 | Soil | MLQLVFAEAGLSSTVNVGPLPEVRIDGEAIRDPRDGKVLGRHERHAWRVHGREFFRVDCSCLVKVHFENEAGESSEIYGPFLHFSCADGIAYGDGDICANIDLDSKKWYCHRDQNYWQAMVVKSAAASAA |
Ga0247830_107654311 | 3300033551 | Soil | MLKLVFAEAGPSSTVEVGPLPEICIDGETMRATHGGEILGRHHRHEWIVQGRHFFRVDCSCPAKVHFENRKGESSEVFGPFLHFSCADGIAYGDGDICANIDLETK |
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