Metagenome / Metatranscriptome Family F095822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095822
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	62 residues
Representative Sequence	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKYLEALMSAAPGEYFIRDASTGEIVLRLGAIPPA
Number of Associated Samples	64
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.12 %
% of genes near scaffold ends (potentially truncated)	17.14 %
% of genes from short scaffolds (< 2000 bps)	58.10 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (59.048 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (90.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.38% β-sheet: 26.37% Coil/Unstructured: 58.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
d.142.2.0: automated matches	d7k72a_	7k72	0.69765
d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase	d3jsla_	3jsl	0.6817
d.73.1.1: RuBisCO, small subunit	d1wdds_	1wdd	0.68013
d.187.1.1: Photosystem I subunit PsaD	d6ly5d_	6ly5	0.67884
d.73.1.1: RuBisCO, small subunit	d4f0hb_	4f0h	0.66655

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF14417	MEDS	15.24
PF13545	HTH_Crp_2	14.29
PF00027	cNMP_binding	12.38
PF04972	BON	8.57
PF00072	Response_reg	5.71
PF01566	Nramp	2.86
PF12779	WXXGXW	1.90
PF00210	Ferritin	1.90
PF00005	ABC_tran	1.90
PF00512	HisKA	1.90
PF02518	HATPase_c	1.90
PF12732	YtxH	0.95
PF07043	DUF1328	0.95
PF07690	MFS_1	0.95
PF00440	TetR_N	0.95
PF04237	YjbR	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	2.86
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.95
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1000587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4973	Open in IMG/M
3300001131\|JGI12631J13338_1002285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4336	Open in IMG/M
3300001172\|JGI12681J13546_1004461	Not Available	766	Open in IMG/M
3300001546\|JGI12659J15293_10063554	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300001593\|JGI12635J15846_10154151	Not Available	1572	Open in IMG/M
3300002245\|JGIcombinedJ26739_100349132	Not Available	1360	Open in IMG/M
3300003350\|JGI26347J50199_1000810	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300003350\|JGI26347J50199_1020879	Not Available	711	Open in IMG/M
3300003367\|JGI26338J50219_1003837	Not Available	1139	Open in IMG/M
3300003505\|JGIcombinedJ51221_10003745	All Organisms → cellular organisms → Bacteria	4393	Open in IMG/M
3300003505\|JGIcombinedJ51221_10013717	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300004080\|Ga0062385_10861285	Not Available	598	Open in IMG/M
3300004091\|Ga0062387_100428931	Not Available	900	Open in IMG/M
3300004092\|Ga0062389_101079901	Not Available	988	Open in IMG/M
3300004635\|Ga0062388_100630202	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300004635\|Ga0062388_101728012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300004635\|Ga0062388_102201522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005541\|Ga0070733_10001780	All Organisms → cellular organisms → Bacteria	15859	Open in IMG/M
3300005591\|Ga0070761_10001649	All Organisms → cellular organisms → Bacteria	14000	Open in IMG/M
3300005591\|Ga0070761_10001759	All Organisms → cellular organisms → Bacteria	13498	Open in IMG/M
3300005591\|Ga0070761_10003799	All Organisms → cellular organisms → Bacteria	8999	Open in IMG/M
3300005591\|Ga0070761_10242677	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005591\|Ga0070761_10934962	Not Available	549	Open in IMG/M
3300005602\|Ga0070762_10012369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4319	Open in IMG/M
3300005712\|Ga0070764_10023405	All Organisms → cellular organisms → Bacteria	3087	Open in IMG/M
3300005712\|Ga0070764_10065227	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005712\|Ga0070764_10496376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300005712\|Ga0070764_10959685	Not Available	538	Open in IMG/M
3300006176\|Ga0070765_100020474	All Organisms → cellular organisms → Bacteria	4933	Open in IMG/M
3300006176\|Ga0070765_100027176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4390	Open in IMG/M
3300006176\|Ga0070765_100130928	All Organisms → cellular organisms → Bacteria → Acidobacteria	2214	Open in IMG/M
3300006176\|Ga0070765_100682315	Not Available	970	Open in IMG/M
3300006176\|Ga0070765_101050719	Not Available	770	Open in IMG/M
3300009518\|Ga0116128_1109739	Not Available	809	Open in IMG/M
3300010339\|Ga0074046_10230923	Not Available	1154	Open in IMG/M
3300014161\|Ga0181529_10017405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6154	Open in IMG/M
3300014489\|Ga0182018_10103136	All Organisms → cellular organisms → Bacteria → Acidobacteria	1670	Open in IMG/M
3300014501\|Ga0182024_10010120	All Organisms → cellular organisms → Bacteria → Acidobacteria	19325	Open in IMG/M
3300014658\|Ga0181519_10481524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300018037\|Ga0187883_10000374	All Organisms → cellular organisms → Bacteria → Acidobacteria	28895	Open in IMG/M
3300019786\|Ga0182025_1006550	Not Available	1231	Open in IMG/M
3300020579\|Ga0210407_10187880	Not Available	1603	Open in IMG/M
3300020580\|Ga0210403_10436715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300020582\|Ga0210395_10003676	All Organisms → cellular organisms → Bacteria	11755	Open in IMG/M
3300020583\|Ga0210401_10100802	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300020583\|Ga0210401_10606175	Not Available	957	Open in IMG/M
3300020583\|Ga0210401_10678065	Not Available	891	Open in IMG/M
3300021170\|Ga0210400_10528730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300021181\|Ga0210388_10102042	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300021181\|Ga0210388_10145831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2054	Open in IMG/M
3300021181\|Ga0210388_10318026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300021401\|Ga0210393_10068652	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300021401\|Ga0210393_10294912	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300021401\|Ga0210393_11055018	Not Available	657	Open in IMG/M
3300021403\|Ga0210397_10370747	Not Available	1065	Open in IMG/M
3300021407\|Ga0210383_10176788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1821	Open in IMG/M
3300021420\|Ga0210394_10000050	All Organisms → cellular organisms → Bacteria	282222	Open in IMG/M
3300021420\|Ga0210394_10001881	All Organisms → cellular organisms → Bacteria	31198	Open in IMG/M
3300021420\|Ga0210394_10158918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1965	Open in IMG/M
3300021474\|Ga0210390_10000253	All Organisms → cellular organisms → Bacteria	59114	Open in IMG/M
3300023030\|Ga0224561_1022133	Not Available	555	Open in IMG/M
3300024271\|Ga0224564_1038515	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300025404\|Ga0208936_1026022	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300026467\|Ga0257154_1000690	All Organisms → cellular organisms → Bacteria	3512	Open in IMG/M
3300026467\|Ga0257154_1003025	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300026467\|Ga0257154_1072992	Not Available	543	Open in IMG/M
3300027080\|Ga0208237_1014916	Not Available	1158	Open in IMG/M
3300027334\|Ga0209529_1019050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300027545\|Ga0209008_1023756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1431	Open in IMG/M
3300027559\|Ga0209222_1021152	Not Available	1275	Open in IMG/M
3300027698\|Ga0209446_1133933	Not Available	640	Open in IMG/M
3300027701\|Ga0209447_10136382	Not Available	674	Open in IMG/M
3300027737\|Ga0209038_10001647	All Organisms → cellular organisms → Bacteria	6656	Open in IMG/M
3300027737\|Ga0209038_10039923	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300027767\|Ga0209655_10000568	All Organisms → cellular organisms → Bacteria	13988	Open in IMG/M
3300027767\|Ga0209655_10042810	Not Available	1515	Open in IMG/M
3300027767\|Ga0209655_10080574	Not Available	1082	Open in IMG/M
3300027767\|Ga0209655_10214441	Not Available	631	Open in IMG/M
3300027768\|Ga0209772_10027931	All Organisms → cellular organisms → Bacteria → Proteobacteria	1626	Open in IMG/M
3300027795\|Ga0209139_10018916	All Organisms → cellular organisms → Bacteria → Acidobacteria	2494	Open in IMG/M
3300027853\|Ga0209274_10003757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7206	Open in IMG/M
3300027853\|Ga0209274_10004256	All Organisms → cellular organisms → Bacteria	6703	Open in IMG/M
3300027853\|Ga0209274_10088418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300027853\|Ga0209274_10089597	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300027867\|Ga0209167_10001186	All Organisms → cellular organisms → Bacteria	15873	Open in IMG/M
3300027879\|Ga0209169_10166622	Not Available	1149	Open in IMG/M
3300027895\|Ga0209624_10050836	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300027895\|Ga0209624_10157604	Not Available	1501	Open in IMG/M
3300028906\|Ga0308309_10002415	All Organisms → cellular organisms → Bacteria	11152	Open in IMG/M
3300028906\|Ga0308309_11279658	Not Available	631	Open in IMG/M
3300031708\|Ga0310686_100036480	Not Available	1833	Open in IMG/M
3300031708\|Ga0310686_102025393	All Organisms → cellular organisms → Bacteria	4168	Open in IMG/M
3300031708\|Ga0310686_104389775	Not Available	1387	Open in IMG/M
3300031708\|Ga0310686_108935569	Not Available	1388	Open in IMG/M
3300031708\|Ga0310686_112493701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3996	Open in IMG/M
3300031708\|Ga0310686_114719760	All Organisms → cellular organisms → Bacteria	14815	Open in IMG/M
3300031708\|Ga0310686_117324072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1468	Open in IMG/M
3300031715\|Ga0307476_11166524	Not Available	564	Open in IMG/M
3300031823\|Ga0307478_10833092	Not Available	772	Open in IMG/M
3300032515\|Ga0348332_13497107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3256	Open in IMG/M
3300034163\|Ga0370515_0003519	Not Available	7755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	24.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.29%
Freshwater	Environmental → Aquatic → Freshwater	24.76%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.24%
Loam	Environmental → Terrestrial → Soil → Loam	34.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	34.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	20.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	18.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001172	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10005878	3300001084	Forest Soil	MDLGFDIFRTLDDGTPLWIQQVATLDDGRKNLHALIGAAPAEYFIRDASTGEIVLRMGGNSPI*
JGI12631J13338_10022851	3300001131	Forest Soil	MDLGFDIFKTMDDGTPLWIKQVSSLDEGRRHLETLIGAAPGEYFIRDASSGEIAFRLGNISST*
JGI12681J13546_10044611	3300001172	Forest Soil	LDDGTPLWIQQVATLDDGRKNLHALIGAAPAEYFIRDASTGEIVLRMGGNSPI*
JGI12659J15293_100635543	3300001546	Forest Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTAPAEYFIRDAATGEIVLRMGANPPA*
JGI12635J15846_101541513	3300001593	Forest Soil	MNLGFDIFRTLDDGTPLWIQQVATLDDGRKSLDALISAAPAEYFVRDASTGEIVLRMSGNSPV*
JGIcombinedJ26739_1003491322	3300002245	Forest Soil	MDLGFDIFKTMDDGTPLWIKQVPTLDDGRQHLEALVGTAPGEYFVRDASTGEIAFRLGNTPSS*
JGI26347J50199_10008103	3300003350	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVSTLDEGKESLDALMSATPAEYFIRDASSGEIVFRLGANPPR*
JGI26347J50199_10208791	3300003350	Bog Forest Soil	MELGFDIFKTMDDGTPLWIKQVPTLDDGRQHLETLIGTAPGEYFIRDASTGEIAFRLGNISSS*
JGI26338J50219_10038371	3300003367	Bog Forest Soil	MDLGFDIFRTLDDGTPLWIKQVPTLDEGRQHLEALTSAAPGEYFIRDAATGEIALRLGGISNS*
JGIcombinedJ51221_100037457	3300003505	Forest Soil	MDLGFDIFKTMDDGTPLWIKQVSTLDEGRRHLEALIGVAPGEYFIRDASSGEIAFRLGNVSSS*
JGIcombinedJ51221_100137174	3300003505	Forest Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEIVLKWGAIPPA*
Ga0062385_108612852	3300004080	Bog Forest Soil	MDLGFDIFRTLDDGTPLWIKQVPTLDEGRQHLEALTSTAPGEYFIRDAATGEIALRLGGISNS*
Ga0062387_1004289312	3300004091	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVATLEEGKNSLDELMSVTPAEYFIRDASSGAIVFRLGVSPPR*
Ga0062389_1010799012	3300004092	Bog Forest Soil	IFRTLDDGTPLWIKQVATLDDGKRHLNELIRAMPAEYFVRDASTGEIVLRLGAIPPA*
Ga0062388_1006302021	3300004635	Bog Forest Soil	IFRTLDDGTPLWIKQVATLDDGKRHLNELIRAMPGEYFVRDASTGEIVLRLGAIPPA*
Ga0062388_1017280122	3300004635	Bog Forest Soil	DLGFDIFRTLDDGTPLWIKQVATLDDGRKHLDELIRAMPGEYFVRDASTGEIVLRLPAVPPA*
Ga0062388_1022015221	3300004635	Bog Forest Soil	MDLGFDIFRTLDDGTPIWIKQVATLDDGKKSLDALISTAPAEYFVRDASTGEIVLRMGGNSP
Ga0070733_1000178015	3300005541	Surface Soil	MLLHHRPEVYMDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLDELIRAMPGEYFVRDASTGEIVLRLPGVPRA*
Ga0070761_1000164911	3300005591	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEIVLKSGAIPPA*
Ga0070761_1000175915	3300005591	Soil	MDLGFDIFKTMDDGTPLWIKQVATLDEGRRHLEALISASPGEYFIRNASTGEIALRLGSISPN*
Ga0070761_100037992	3300005591	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTAPAEYFIRDAATGEIVLRMGANPSA*
Ga0070761_102426772	3300005591	Soil	MDLGFDIFRTLDGGTALSVQQVATLDDGTKSLDGLISAASAEYFIRDASTGEIVLSIGGNFPL*
Ga0070761_109349621	3300005591	Soil	MDLGFDIFRTLDDGTPVWIKQVPTLDEGKQHLEAMISASPGEYFIRNASTGEIALRLGGISSP*
Ga0070762_100123691	3300005602	Soil	RKLEVRMDLGFDIFKTMDDGTPLWIKQVSSLDEGRRHLETLIGAAPGEYFIRDASSGEIAFRLGNISST*
Ga0070764_100234052	3300005712	Soil	MDLGFDIFKTMDDGTPLWIKQVSTLDEGRRHLEALIGVAPGEYFIRDASSGEIAFRLGNISST*
Ga0070764_100652272	3300005712	Soil	MDLGFDIFRMLDDGTPLWIQQVATLDDGRKSLDALIGAAPAEYFIRDASTGEIVLRTGGNSPV*
Ga0070764_104963762	3300005712	Soil	MDLGFDIFRTLDDGTPLWVKQVATLDEGKKHLDALHSAASAEYFIRDASTGEIVLRLGAIPSA*
Ga0070764_109596851	3300005712	Soil	MNLGFDIFRTLDDGTPLWIQQVGTLDDGKKSLADLISVAPAEYFVRDASTGEIVLRMSG
Ga0070765_1000204748	3300006176	Soil	MDLGFDIFRTMDDGTPLWIKQVPTLDEGRQHLEALVSAAPGEYFIRNASTGEIALRLGGISNP*
Ga0070765_1000271766	3300006176	Soil	MDLGFDIFRTLDGGTALSVQQVATLDDGTKSLDVLISAASAPYLIRDASTGEIVLSIGGNFPL*
Ga0070765_1001309282	3300006176	Soil	MDLGFDIFKTMDDGTPLWIKQVPTLDDGRQHLEALIGTAPGEYFVRDASTGEIAFRLGNTPSS*
Ga0070765_1006823152	3300006176	Soil	MDLGFDIFRTQEDGTPLWIKQVATLDDGKKHLETLIRASPAEYFIRDASTGQIVFRSGTIRRT*
Ga0070765_1010507192	3300006176	Soil	MDLGFDIFRTLDDGRPVWIKQVPTLDEGKQHLEALLSASPGEYFIRNASTGEIALRLGGISSP*
Ga0116128_11097391	3300009518	Peatland	MDFGYDIFRTLDDGTPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA*
Ga0116126_12481072	3300009640	Peatland	SVMIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA*
Ga0074046_102309231	3300010339	Bog Forest Soil	MDLGFDIFRKLDDNTPLWIMQVATLDDGKKHLETLISAAPGEYFIRDASTGEIALRLGSLAPT*
Ga0181529_100174051	3300014161	Bog	YDIFRTLDDGTPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA*
Ga0182018_101031363	3300014489	Palsa	MDLGFDIFRTLDDGTPLWVQQVATLDDGRKSLDGLISAAPAEYFIRDASTGEIVLRMGGNSPV*
Ga0182024_100101203	3300014501	Permafrost	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTARAEYFIRDAATGEIVLRMGANPSA*
Ga0181519_104815241	3300014658	Bog	MDFGYDIFRTLDDGSPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA*
Ga0187883_100003746	3300018037	Peatland	MDFGYDIFRTLDDGSPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA
Ga0182025_10065502	3300019786	Permafrost	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTARAEYFIRDAATGEIVLRMGANPSA
Ga0210407_101878802	3300020579	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASSGEIAFRLGNISST
Ga0210403_104367152	3300020580	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEIVLKWGAIPPA
Ga0210395_1000367610	3300020582	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEIVLKSGAIPPA
Ga0210401_101008022	3300020583	Soil	MDLGFDIFRTLENGTPLWIKQVATLDDGKKHLEALISAAPGEYFIRDASTGEIALRLGSISSS
Ga0210401_106061752	3300020583	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKIHLAALTSSMPAEYFIRDASTGEVVFRSGAKPPV
Ga0210401_106780652	3300020583	Soil	MDLGFDIFKTMDDGTPLWIKQVPTLDDGRQHLEALIGTAPGEYFVRDASTGEIAFRLGNTPSS
Ga0210400_105287302	3300021170	Soil	MDLGFDIFRTLDDGTPLWVKQVATLDEGKKHLDALHSAASAEYFIRDASTGEIVLRLGAIPSA
Ga0210388_101020425	3300021181	Soil	MNLGFDIFRTLDDGTPLWIQQVGTLDDGKKSLADLISVAPAEYFVRDASTGEIVLRMSGNPPV
Ga0210388_101458312	3300021181	Soil	MDLGFDIFRMLDDGTPLWIQQVATLDDGRKSLDALIGAAPAEYFIRDASTGEIVLRTGGNSPV
Ga0210388_103180261	3300021181	Soil	MDLGFDIFRTLDGGTALSVQQVATLDDGTKSLDVLISAASAPYLIRDASTGEIVLSIGGNFPL
Ga0210393_100686522	3300021401	Soil	MDLGFDIFKTMDDGTPLWIKQVSSLDEGRRHLETLIGAAPGEYFIRDASSGEIAFRLGNISST
Ga0210393_102949121	3300021401	Soil	RRKLEVRMDLGFDIFKTMDDGTPLWIKQVPTLDDGRQHLEALVGTAPGEYFVRDASTGEIAFRLGNTPSS
Ga0210393_110550181	3300021401	Soil	MDFGFDIFRTLDDGNPLWIMQVGSLDDGRKHLDQLVSSSPGEYFVRDASSGEIVLRLSGIPPV
Ga0210397_103707471	3300021403	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEI
Ga0210383_101767881	3300021407	Soil	PEVQMDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLHALRSAAPAEYFIRDASTGEIVLRLGAIPPA
Ga0210383_107680852	3300021407	Soil	GTPLWIKQVATLDDGKKHLDALMSAAPAEYFIRDASTGEIVFRLGATPPARFKSHT
Ga0210394_10000050194	3300021420	Soil	MDLGFDIFRTLDDGTPLWIKQVASLDDGKKHLEALMSAAPGEYFIRDASTGEIVLKWGAIPPA
Ga0210394_1000188129	3300021420	Soil	MDFGFDIFRTLDDGTPLWIKQVATLDDGKQYLDELISATPAQYFIRDASTGEIVFRSGSIPPA
Ga0210394_101589181	3300021420	Soil	FRMLDDGTPLWIQQVATLDDGRKSLDALIGAAPAEYFIRDASTGEIVLRTGGNSPV
Ga0210390_1000025343	3300021474	Soil	MDLGFDIFKTMDDGTPLWIKQVPTLDDGRQHLEALVGTAPGEYFVRDASTGEIAFRLGNTPSS
Ga0242649_10589802	3300022509	Soil	NPLWIMQVGSLDDGRKHLDQLVSSSPGEYFVRDASSGEIVLRLSGIPPV
Ga0224561_10221331	3300023030	Soil	MDLGFDIFRKLDDGTPLWIKQVATFDDGKKHLETLIGAAPGEYFIRDASTGEIVLKCGAVPPA
Ga0224564_10385151	3300024271	Soil	MDLGFDIFRTLDDGTPLWIKQVATLEEGRKSLDALINSAPAPYFVRDASSGEVVLRMGGNSPA
Ga0208936_10260221	3300025404	Peatland	MDFGYDIFRTLDDGTPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA
Ga0208194_10017875	3300025412	Peatland	FRTLDDGTPLWIMQVGTLDEGKKHVGQLVSSAPGEYFIRDASSCEIVLKSSAIPPA
Ga0257154_10006902	3300026467	Soil	MDLGFDIFRTLDDGTPLWIKQVVTLDDGRKALDALISTAPAEYFIRDAATGEIVLRMGANPSA
Ga0257154_10030251	3300026467	Soil	MDLGFDIFRTLDDGTPVWIKQVPTLDEGKQLLEAMISASPGEYFIRNASTGEIALRLGGISSP
Ga0257154_10729922	3300026467	Soil	MDLGFDIFKTMDDGTPLWIKQVSSLDEGRRHLETLIGAAPGEYFIRDASSGEI
Ga0208237_10149161	3300027080	Forest Soil	MDLGFDIFKTMDDGTPLWIKQVSTLDEGRRHLEALIGVAPGEYFIRDASSGEIAFRLGNVSSS
Ga0209529_10190502	3300027334	Forest Soil	MDLGFDIFRTLDDGTPLWIQQVATLDDGRKNLHALIGAAPAEYFIRDASTGEIVLRMGGNSPI
Ga0209008_10237561	3300027545	Forest Soil	DIFRMLDDGTPLWIQQVATLDDGRKSLDALIGAAPAEYFIRDASTGEIVLRTGGNSPV
Ga0209222_10211522	3300027559	Forest Soil	MNLGFDIFRTLDDGTPLWIQQVATLDDGRKSLDALISAAPAEYFVRDASTGEIVLRMSGNSPV
Ga0209446_11339332	3300027698	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVSTLDEGKESLDALMSATPAEYFIRDAFSGEIVFRLGANPPR
Ga0209447_101363822	3300027701	Bog Forest Soil	MELGFDIFKTMDDGTPLWIKQVPTLDDGRQHLETLIGTAPGEYFIRDASTGEIAFRLGNISSS
Ga0209038_100016472	3300027737	Bog Forest Soil	MDLGFDIFRTLDDGTPLWIKQVPTLDEGRQHLEALTSAAPGEYFIRDAATGEIALRLGGISNS
Ga0209038_100399232	3300027737	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVSTLDEGKKSVDALMSATPAEYFIRDASSGEIVFRLGANPPR
Ga0209655_100005688	3300027767	Bog Forest Soil	MDLGFDIFRTLDDGTPLWIKQVPTLDEGRQHLEALTSTAPGEYFIRDAATGEIALRLGGISNS
Ga0209655_100428102	3300027767	Bog Forest Soil	MDLGFDIFKTMDDGTPLWIKQVSTLNEGRQHLEALIGAVPGEYFIRDASSGEIAFRLGNISST
Ga0209655_100805742	3300027767	Bog Forest Soil	MDLGFDIFRTTDDGTPLWIKQVSTLDEGRQHLEALTSTAPGEYFIRDAATGEITLRLGGISNS
Ga0209655_102144411	3300027767	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVATLEEGKNSLDELMSVTPAEYFIRDASSGAIVFRLGVSPPR
Ga0209772_100279312	3300027768	Bog Forest Soil	MDLGFDIFRTLDDGTPLWMKQVSTLDEGKESLDALMSATPAEYFIRDASSGEIVFRLGANPPR
Ga0209139_100189162	3300027795	Bog Forest Soil	MDLGFDIFRTTDDGTPLWIKQVSTLDEGRQHLEALTSTAPGEYFIRDAATGEIALRLGGISNS
Ga0209274_100037577	3300027853	Soil	MDLGFDIFKTMDDGTPLWIKQVATLDEGRRHLEALISASPGEYFIRNASTGEIALRLGSISPN
Ga0209274_100042562	3300027853	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTAPAEYFIRDAATGEIVLRMGANPSA
Ga0209274_100884182	3300027853	Soil	MDLGFDIFRTLDGGTALSVQQVATLDDGTKSLDGLISAASAEYFIRDASTGEIVLSIGGNFPL
Ga0209274_100895971	3300027853	Soil	MDLGFDIFRTLDDGTPVWIKQVPTLDEGKQHLEAMISASPGEYFIRNASTGEIALRLGGISSP
Ga0209167_1000118615	3300027867	Surface Soil	MLLHHRPEVYMDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLDELIRAMPGEYFVRDASTGEIVLRLPGVPRA
Ga0209169_101666221	3300027879	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKHLEALMSAAPGEYFIRDASTGEIVL
Ga0209624_100508364	3300027895	Forest Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGRKALDALISTAPAEYFIRDAATGEIVLRMGANPPA
Ga0209624_101576042	3300027895	Forest Soil	MDLGFDIFRTLDDGTPLWIQQVATLEDGRKSLDALLGAVPAEYFIRDASTGEIVLRMGGNSRD
Ga0308309_100024152	3300028906	Soil	MDLGFDIFRTMDDGTPLWIKQVPTLDEGRQHLEALVSAAPGEYFIRNASTGEIALRLGGISNP
Ga0308309_112796581	3300028906	Soil	DLGFDIFRTQEDGTPLWIKQVATLDDGKKHLETLIRASPAEYFIRDASTGQIVFRSGTIRRT
Ga0310686_1000364803	3300031708	Soil	MDLGFDIFRTLDDGTPLWVQQVATLDDGRKSLGGLISAAPAEYFIRDASTGEIVLRMGGNSPD
Ga0310686_1020253932	3300031708	Soil	MDLGFDIFRTLDDGTPLWVKQVATLDDGKKHLDALHSAAPAEYFIRDASTGEIVLRLGAIPSA
Ga0310686_1043897752	3300031708	Soil	MDLGFDIFRTLDDGTPLWIKQVATLEDGRKSLDALIGSAPAEYFIRDASTGRIVLRIGGSSPA
Ga0310686_1089355693	3300031708	Soil	MDLGFDIFRTLDDGTPVWIKQVPTLDEGKQHLEAMISASPGEYFIRNASTGEIALRLGGISS
Ga0310686_1124937015	3300031708	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKQLEALVSAEPAEYFIRDASTGEIVCRLGAIPPA
Ga0310686_11471976013	3300031708	Soil	MDLGFDIFRTLDDGTPLWIKQVATLEEGRKSLDALISSAPAEYFVRDATSGEIVLKMGGNSPA
Ga0310686_1173240722	3300031708	Soil	MDLGFDIFRTLDDGTPLWIKQVATLDDGKKYLEALMSAAPGEYFIRDASTGEIVLRLGAIPPA
Ga0307476_111665241	3300031715	Hardwood Forest Soil	SEVPIHHQRPEVQMGLGFDIFKSLDDGTPLWIKQVATLDDGKQHLDALMSAAPAEYFIRDASTGEIVHRLGGNPPA
Ga0307478_108330922	3300031823	Hardwood Forest Soil	MGLGFDIFKSLDDGTPLWIKQVATLDDGKQHLDALMSAAPAEYFIRDASTGEIVHRLGGNPPA
Ga0348332_134971071	3300032515	Plant Litter	MDLGFDIFRTLDDRTPLWVKQVATLDDGKRHLDALHSAAPAEYFIRDASTGEIVLRLGAIPSA
Ga0370515_0003519_5217_5408	3300034163	Untreated Peat Soil	MDLGFDIFRTLDDGTPLWVQQVATLDDGRKSLDGLISAAPAEYFIRDASTGEIVLRMGGNSPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095822

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences