Metagenome / Metatranscriptome Family F095823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095823
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	119 residues
Representative Sequence	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK
Number of Associated Samples	66
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.05 %
% of genes near scaffold ends (potentially truncated)	29.52 %
% of genes from short scaffolds (< 2000 bps)	53.33 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.191 % of family members)
Environment Ontology (ENVO)	Unclassified (64.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (96.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.65% β-sheet: 11.61% Coil/Unstructured: 67.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13620	CarboxypepD_reg	5.71
PF00440	TetR_N	3.81
PF00873	ACR_tran	2.86
PF13561	adh_short_C2	2.86
PF14552	Tautomerase_2	2.86
PF00248	Aldo_ket_red	2.86
PF00724	Oxidored_FMN	2.86
PF13431	TPR_17	1.90
PF00589	Phage_integrase	1.90
PF00106	adh_short	0.95
PF08281	Sigma70_r4_2	0.95
PF12680	SnoaL_2	0.95
PF08220	HTH_DeoR	0.95
PF07681	DoxX	0.95
PF02771	Acyl-CoA_dh_N	0.95
PF03544	TonB_C	0.95
PF07715	Plug	0.95
PF13744	HTH_37	0.95
PF13414	TPR_11	0.95
PF01904	DUF72	0.95
PF02321	OEP	0.95
PF12710	HAD	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	2.86
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	2.86
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.95
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.95
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.95
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.24 %
Unclassified	root	N/A	24.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.24 %
Unclassified	root	N/A	24.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.24 %
Unclassified	root	N/A	24.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.48 %
Unclassified	root	N/A	24.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.90 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.90 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.90 %
Selenomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae	0.95 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.90 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.95 %
Mitsuokella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.90 %
Mitsuokella jalaludinii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella → Mitsuokella jalaludinii	0.95 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001151\|JGI12713J13577_1019030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	585	Open in IMG/M
3300001172\|JGI12681J13546_1000952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300001471\|JGI12712J15308_10001006	All Organisms → cellular organisms → Bacteria	8496	Open in IMG/M
3300001546\|JGI12659J15293_10000659	All Organisms → cellular organisms → Bacteria → Acidobacteria	11233	Open in IMG/M
3300001546\|JGI12659J15293_10028605	Not Available	1387	Open in IMG/M
3300001593\|JGI12635J15846_10035276	All Organisms → cellular organisms → Bacteria	3955	Open in IMG/M
3300002245\|JGIcombinedJ26739_100020305	All Organisms → cellular organisms → Bacteria → Acidobacteria	5699	Open in IMG/M
3300003370\|JGI26337J50220_1000297	All Organisms → cellular organisms → Bacteria → Proteobacteria	4586	Open in IMG/M
3300004091\|Ga0062387_100033362	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300004092\|Ga0062389_104328458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella → Mitsuokella jalaludinii	534	Open in IMG/M
3300005591\|Ga0070761_10000932	All Organisms → cellular organisms → Bacteria	18492	Open in IMG/M
3300005591\|Ga0070761_10005367	All Organisms → cellular organisms → Bacteria	7515	Open in IMG/M
3300005591\|Ga0070761_10164864	Not Available	1302	Open in IMG/M
3300005602\|Ga0070762_10000319	All Organisms → cellular organisms → Bacteria	19323	Open in IMG/M
3300005602\|Ga0070762_10088313	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300005602\|Ga0070762_10417667	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005602\|Ga0070762_10535202	Not Available	771	Open in IMG/M
3300005610\|Ga0070763_10042144	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300005610\|Ga0070763_10693864	Not Available	596	Open in IMG/M
3300005712\|Ga0070764_10034912	Not Available	2544	Open in IMG/M
3300005712\|Ga0070764_10043383	Not Available	2293	Open in IMG/M
3300005712\|Ga0070764_10099913	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300005712\|Ga0070764_10185004	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005921\|Ga0070766_10190944	Not Available	1276	Open in IMG/M
3300006176\|Ga0070765_100003071	All Organisms → cellular organisms → Bacteria	10670	Open in IMG/M
3300006176\|Ga0070765_100138743	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300006176\|Ga0070765_101031359	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300014489\|Ga0182018_10752792	Not Available	506	Open in IMG/M
3300014501\|Ga0182024_10066462	All Organisms → cellular organisms → Bacteria → Acidobacteria	5508	Open in IMG/M
3300020579\|Ga0210407_10001015	All Organisms → cellular organisms → Bacteria	27913	Open in IMG/M
3300020579\|Ga0210407_10382029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1102	Open in IMG/M
3300020580\|Ga0210403_10174301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1762	Open in IMG/M
3300020580\|Ga0210403_10582615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	905	Open in IMG/M
3300020581\|Ga0210399_10026106	All Organisms → cellular organisms → Bacteria → Acidobacteria	4648	Open in IMG/M
3300020581\|Ga0210399_10901802	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300020582\|Ga0210395_11058725	Not Available	599	Open in IMG/M
3300020583\|Ga0210401_10013427	All Organisms → cellular organisms → Bacteria	7954	Open in IMG/M
3300020583\|Ga0210401_10098942	All Organisms → cellular organisms → Bacteria	2740	Open in IMG/M
3300020583\|Ga0210401_10197017	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300020583\|Ga0210401_10398500	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300021168\|Ga0210406_10108481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2354	Open in IMG/M
3300021170\|Ga0210400_10174919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1738	Open in IMG/M
3300021171\|Ga0210405_10000475	All Organisms → cellular organisms → Bacteria → Acidobacteria	53690	Open in IMG/M
3300021171\|Ga0210405_10071677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2731	Open in IMG/M
3300021171\|Ga0210405_10500120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	953	Open in IMG/M
3300021180\|Ga0210396_10117765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2398	Open in IMG/M
3300021181\|Ga0210388_10000299	All Organisms → cellular organisms → Bacteria	43160	Open in IMG/M
3300021181\|Ga0210388_10057114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3265	Open in IMG/M
3300021181\|Ga0210388_10317530	Not Available	1369	Open in IMG/M
3300021401\|Ga0210393_10003812	All Organisms → cellular organisms → Bacteria	12032	Open in IMG/M
3300021401\|Ga0210393_10783116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	776	Open in IMG/M
3300021402\|Ga0210385_10061960	Not Available	2528	Open in IMG/M
3300021403\|Ga0210397_10199256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1430	Open in IMG/M
3300021404\|Ga0210389_10982897	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300021405\|Ga0210387_10006997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8650	Open in IMG/M
3300021405\|Ga0210387_10825181	Not Available	818	Open in IMG/M
3300021406\|Ga0210386_10036697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3862	Open in IMG/M
3300021407\|Ga0210383_10015761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6379	Open in IMG/M
3300021407\|Ga0210383_10091559	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300021407\|Ga0210383_10408618	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300021433\|Ga0210391_10170946	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300021433\|Ga0210391_10185006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1639	Open in IMG/M
3300021475\|Ga0210392_10939334	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021477\|Ga0210398_10061621	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300021477\|Ga0210398_10258452	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300021478\|Ga0210402_10118559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2391	Open in IMG/M
3300022731\|Ga0224563_1001927	Not Available	1269	Open in IMG/M
3300022733\|Ga0224562_1002215	All Organisms → cellular organisms → Bacteria → Acidobacteria	1426	Open in IMG/M
3300023030\|Ga0224561_1003936	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300024225\|Ga0224572_1038171	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300026467\|Ga0257154_1000722	Not Available	3460	Open in IMG/M
3300027370\|Ga0209010_1000045	All Organisms → cellular organisms → Bacteria	56561	Open in IMG/M
3300027545\|Ga0209008_1007284	Not Available	2626	Open in IMG/M
3300027545\|Ga0209008_1021749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1498	Open in IMG/M
3300027609\|Ga0209221_1075745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	879	Open in IMG/M
3300027648\|Ga0209420_1000006	All Organisms → cellular organisms → Bacteria → Acidobacteria	155875	Open in IMG/M
3300027667\|Ga0209009_1050655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1037	Open in IMG/M
3300027676\|Ga0209333_1191552	Not Available	541	Open in IMG/M
3300027729\|Ga0209248_10028378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1743	Open in IMG/M
3300027767\|Ga0209655_10000594	All Organisms → cellular organisms → Bacteria	13834	Open in IMG/M
3300027768\|Ga0209772_10060056	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300027795\|Ga0209139_10044807	Not Available	1558	Open in IMG/M
3300027853\|Ga0209274_10002382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9224	Open in IMG/M
3300027853\|Ga0209274_10002458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9055	Open in IMG/M
3300027855\|Ga0209693_10123971	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300027879\|Ga0209169_10005881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7053	Open in IMG/M
3300027884\|Ga0209275_10009851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4064	Open in IMG/M
3300027884\|Ga0209275_10519249	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300027889\|Ga0209380_10000272	All Organisms → cellular organisms → Bacteria → Acidobacteria	35730	Open in IMG/M
3300027889\|Ga0209380_10174520	Not Available	1259	Open in IMG/M
3300027895\|Ga0209624_10349729	Not Available	985	Open in IMG/M
3300027908\|Ga0209006_10000054	All Organisms → cellular organisms → Bacteria → Acidobacteria	115698	Open in IMG/M
3300028015\|Ga0265353_1006725	Not Available	990	Open in IMG/M
3300028906\|Ga0308309_10000734	All Organisms → cellular organisms → Bacteria	20050	Open in IMG/M
3300028906\|Ga0308309_10044579	Not Available	3154	Open in IMG/M
3300030759\|Ga0265745_1032217	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_101059371	All Organisms → cellular organisms → Bacteria → Acidobacteria	8301	Open in IMG/M
3300031708\|Ga0310686_107027744	Not Available	731	Open in IMG/M
3300031708\|Ga0310686_107061664	Not Available	907	Open in IMG/M
3300031708\|Ga0310686_110604155	Not Available	1703	Open in IMG/M
3300031708\|Ga0310686_115796785	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031708\|Ga0310686_118726476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1503	Open in IMG/M
3300031715\|Ga0307476_10044883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2994	Open in IMG/M
3300034163\|Ga0370515_0028990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2509	Open in IMG/M
3300034163\|Ga0370515_0182139	Not Available	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.38%
Aquatic	Environmental → Aquatic	6.67%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.38%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.62%
Loam	Environmental → Terrestrial → Soil → Loam	40.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	40.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	25.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001172	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12713J13577_10190301	3300001151	Forest Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAK
JGI12681J13546_10009523	3300001172	Forest Soil	AGQNYVLNWPPAESIRRRSRLNPAMRTSTRKNACSSVDILRAKNYQAERESPPSECKLTELNRKNMPRHDERGSDMPRDFSEAEMSWIVEAGGGRYVGVMNEIPGNVECIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
JGI12712J15308_100010064	3300001471	Forest Soil	MHILRMKNYATELETLASECTVTELNGKNMQRHHERGGNTSWILSEAEMCSIVEAGGGRYVGVMREIPGKMEAIVLFISLQTRTTLGLPSSRLTVAAVREQLAESDAAFSQADSK*
JGI12659J15293_100006596	3300001546	Forest Soil	VDILRAKNYQAERESPPSECKLTELNRKNMPRHDERGSDMPRDFSEAEMSWIVEAGGGRYVGVMNEIPGNVECIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
JGI12659J15293_100286052	3300001546	Forest Soil	MLRAKNYQAEREAPTGECALTELNRKNMPQHEGRGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
JGI12635J15846_100352764	3300001593	Forest Soil	VKNCRAELDARASKCTVADLNRKNMPQHQEQRSDMPRTLREAEMCRIVEAGGGRYVGLMHEIPGKVKSIVLFTSPQTRSTLALPSARLTVAAVREQLHKSDAAFHNAASK*
JGIcombinedJ26739_1000203054	3300002245	Forest Soil	MLRAKNYQAEREAPTGECALTELNRKNMPQHXXRGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
JGI26337J50220_10002972	3300003370	Bog Forest Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVXNEIPGIVESVVLFTSPRTRSTVALPSSRPTVAAVRQ*
Ga0062387_1000333622	3300004091	Bog Forest Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTVALPSSRPTVAAVRQ*
Ga0062389_1043284581	3300004092	Bog Forest Soil	VLNWLPAESVRRRGRLNPAMRTTLRKNACWSVDILRVKNYQAQLEAPASEYTATELDRKNMRQHDERGSNMPRTLSEAEICSVVEAGGGRYVGVMNEIPGKVEPIVLFTSPQTRSTLALLRSRLTVEAVHEQLAKSDAAFNDAGSK*
Ga0070761_1000093211	3300005591	Soil	MPTTLRKNARSSVHILRVNHYEAELEAPASGYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK*
Ga0070761_1000536710	3300005591	Soil	MKNYEAELEAPARKCMVTESNRKDMQQNYESGGNSPSTLSEAEMCSIVAAGGGRYVGVTNEIPGKMESIVLFTSPQTRSTLSLPSSRLTVAAVREQLAESDAAFKPPTSK*
Ga0070761_101648643	3300005591	Soil	MQTSLRTIARTSVDIPRMENYQAKPEASAREYTVTELNRKNVHQNHERRSSSPSTLSEAEMCSIVEAAGGKYVGVMNQIPGMVESVVLFTSRRTRSTLALPSTRLTVAAVRQQLADSDAAFNQARPK*
Ga0070762_100003193	3300005602	Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK*
Ga0070762_100883133	3300005602	Soil	MRTITRKNACSSVDMLRAKNYQAEREAPTGECALTELNRKNMPQHDERGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
Ga0070762_104176671	3300005602	Soil	VQRIPLGDRRKGRRIVARPDYVLNWPPAESDRRRSRLNAAMQMRLRKTACTSVDIPQMENYESELEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK*
Ga0070762_105352022	3300005602	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK*
Ga0070763_100421443	3300005610	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQSRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK*
Ga0070763_106938641	3300005610	Soil	TTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK*
Ga0070764_100349123	3300005712	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASGYKAAELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK*
Ga0070764_100433833	3300005712	Soil	MRTTTRKNACSSLDMLRVKNSPAELDAPASKCTVADLNRTNMPQHAAQRSDMPRTLSEAEMCQIVEAGGGRYVGLMNEIAGKVESIVLFTSPQTRSTLALPSSRLTVAAVREQLDKSDAAFNDTASE*
Ga0070764_100999133	3300005712	Soil	MRTITRKNACSSVDMLRAKNYQAEREAPTGECALTELNRKNMPQHEERGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK*
Ga0070764_101850041	3300005712	Soil	VADLNRKNMPQHHEQRSDLPRTLHEAEVRRIVEAGGGRYVGLMNEIPGKVESIVLFTSPQTRSTLALPSSRLTVEAVREQLDKSDAAFNDAASK*
Ga0070766_101909441	3300005921	Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKS
Ga0070765_1000030716	3300006176	Soil	MENYEAKLEAPATEYTVTELNCKKMKLHCGRDGNSPPTLSEAELRSIVEAGGGRYVGVMNEIPGKMESIVLFTSPQTRSTLGLPSSLLTVAAVREQLADSDAAFNQTRSK*
Ga0070765_1001387432	3300006176	Soil	MENYESELEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK*
Ga0070765_1010313593	3300006176	Soil	YKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK*
Ga0182018_107527921	3300014489	Palsa	RKNACSSVDILRAKNYQAERESPPSECKLTELNRKNMPRHDERGSDMPRTLSAAEMCWIVEAGGGRYVGVMNEIPGKVESIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAVFNDAASK*
Ga0182024_100664623	3300014501	Permafrost	VDILRVKNCHVELETAASECTVTELNRKTMRQSDERGSSMPRTLSEAEMRSIIETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK*
Ga0210407_100010153	3300020579	Soil	MKNNATEPETLASEYMVTELNGNNMQRHHDRGGNTPWNLSEAEMCSIVEAGGGRYVGVMNEIPGKMEAIVLFISLQTKTTLGLPTSRLTVAAVREQLAESDAAFSQASSK
Ga0210407_103820292	3300020579	Soil	TLASECTVTELNGKNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210403_101743011	3300020580	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASGYKAAELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210403_105826151	3300020580	Soil	MKNNATEPETLASEYMVTELNGNNMQRHHDRGGNTPWNVSEAEMCSIVEAGGGRYVGVMNEIPGKMEAIVLFISLQTKTTLGLPTSRLTVAAVREQLAESDAAFSQASSK
Ga0210399_100261062	3300020581	Soil	MRTTLRKNARSSVHILRVNHYEAELEAAASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK
Ga0210399_109018021	3300020581	Soil	QMRLRKTACTSVDIPQMENYESELEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210395_110587252	3300020582	Soil	ELEAAASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210401_100134278	3300020583	Soil	MENYEPALEAPVREYTATELNRKNMDQHYERVSKSPPTLSEAEMCSIVKAGGGRYVGVMKEIPGKLESIVLFISPQTRSTLGLPTSRLTVAAVREQLTESDAAFNQASSK
Ga0210401_100989423	3300020583	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASGYKAAELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK
Ga0210401_101970172	3300020583	Soil	MNVRMNACSSVLILRMKNYATELETLASECKVTELNGKNMRRHHERGGNSPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKMDAIVLFISLQTRTTLGLPTSRLTVAAVREQLAESDAAFNHAGSK
Ga0210401_103985002	3300020583	Soil	MENYESELEAPARKYTVTDLKQKNSRQHYERGCNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210406_101084812	3300021168	Soil	VHILRMKNYAAELETLASECTVTELNGKNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210400_101749192	3300021170	Soil	MKNNATELETLASEYMVTELNGNNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKMEAIVLFISLQTKTTLGLPTSRLTVAAVREQLAESDAAFSQASSK
Ga0210405_1000047523	3300021171	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210405_100716773	3300021171	Soil	HILRMKNNATEPETLASEYMVTELNGNNMQRHHDRGGNTPWNVSEAEMCSIVEAGGGRYVGVMNEIPGKMEAIVLFISLQTKTTLGLPTSRLTVAAVREQLAESDAAFSQASSK
Ga0210405_105001201	3300021171	Soil	MENYESELEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210396_101177653	3300021180	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASGYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210388_1000029915	3300021181	Soil	MKNYAAELETLASECTVTELNGKNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210388_100571142	3300021181	Soil	MRTITRKNACSSVDMLRAKNYQAEREAPTGECALTELNRKNMPQHEERGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK
Ga0210388_103175302	3300021181	Soil	MRTTPRKTVCFSEDIPRVKNCPAELDARASQCTVADLNRKNMPQHHEQRSDLPRTLPEAEVRRIVEAGGGRYVGLMNEIPGKVESIVLFTSPQTRSTLALPSSRLTVEAVREQLDKSDAAFNDAASK
Ga0210393_100038121	3300021401	Soil	GGGCRADYVLDWPPPEFNRRRRRLNAAMQTSGRTNACSSVHILRMKNYAAELETLASECTVTELNGKNRQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210393_107831161	3300021401	Soil	LRVNHYEAELEAAASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210385_100619602	3300021402	Soil	VKNCPAELDARASQCTVADLNRKNMPQHHEQRSDLPRTLHEAEVRRIVEAGGGRYVGLMNEIPGKVESIVLFTSPQTRSTLALPSSRLTVEAVREQLDKSDAAFNDAASK
Ga0210397_101992562	3300021403	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQSRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK
Ga0210389_109828972	3300021404	Soil	LEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210387_100069972	3300021405	Soil	MENYESELEAPARKYTVTDLKQKNSRQHYERGRNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210387_108251811	3300021405	Soil	RKNACSSVDILRVKNYEAELESPASEYTVTELSRKNKRQRHERGSNMPPTLSEAEMCSIVEAGGGKYVGSMHEIPGKVESIVLFTSPQTKSTLGLPSSRLTVEAVRDQLAKSDAAFNQAGSK
Ga0210386_100366973	3300021406	Soil	MPTTLRKNARSSVHILRVNHYEAELEAPASGYKAAELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210383_100157615	3300021407	Soil	MRTTLRKNARSSVHILRVNHYEAELEAAASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQSRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK
Ga0210383_100915591	3300021407	Soil	MQTSGRTNACSSVHILRMKNYAAELETLASECTVTELNGKNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210383_104086182	3300021407	Soil	MQMRLRKTACTSVDIPQMENYESELEAPARKYTVTDLKQKNSRQHYERGRNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0210391_101709463	3300021433	Soil	MQTSLRTIARTSVDIPRMENYQAKPEASAREYTVTELNRKNVHQNHERRSSSPSTLSEAEMCSIVEAAGGKYVGVVNQIPGMVESVVLFTSRRTRSTLALPSTRLTVAAVRQQLADSDAAFNQARPK
Ga0210391_101850062	3300021433	Soil	MRTTPRKTVCFSEDIPRVKNCPAELDARASQCTVADLNRKNMPQHHEQRSDLPRTLHEAEVRRIVEAGGGRYVGLMNEIPGKVESIVLFTSPQTRSTLALPSSRLTVEAVREQLDKSDAAFNDAASK
Ga0210392_109393342	3300021475	Soil	MRTITRKNACSSVDMLRAKNYQAEREAPTGECALTELNRKNMPQHDERGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSS
Ga0210398_100616212	3300021477	Soil	LNAAMQTSGRTNACSSVHILRMKNYAAELETLASECTVTELNGKNMQRHHERGGNTPWTLSEAEMCSIVEAGGGRYVGVMNEIPGKIESFVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRAGSI
Ga0210398_102584521	3300021477	Soil	RVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0210402_101185593	3300021478	Soil	MRTTLRKNACSSVDILRVKNYEAELESPASEYKVTELSRNNLRQHDERGSNMPPTLSEAEMCSIVEAGGGKYVGSMHEIPGKVESIVLFTSPQTKSTLGLPSSRLTVEAVRDQLAKSDAAFNQAGSK
Ga0224563_10019272	3300022731	Soil	MKYKEAELESHVGEYTVAELNAKNMQRQYERRGNTPPTLSEAEMCSIVEAGGGRYVGVMNEIPGKMETIVLFISRKTRSTLGLPSSRLTIQAVREQLAESDAAFNQADSK
Ga0224562_10022152	3300022733	Soil	ILRVENYEAQLETPASGHTVTELNWKNMRQHNRRVSNMPRTLSEAEMCSIVEAGGGRYVGVMNEMPGKVESIVLFTSPQTRSTLGLRSSRLTVEAVREQLAKSDAAFNQAGSK
Ga0224561_10039361	3300023030	Soil	VARPDYVLDWLPAEFIRGRSRLNPAMRTTLGKNACCSVDILRVENYEAQLETPASGHTVTELNWKNMRQHNRRVSNMPRTLSEAEMCSIVEAGGGRYVGVMNEMPGKVESIVLFTSPQTRSTLGLRSSRLTVEAVREQLAKSDAAFNQADSK
Ga0224572_10381712	3300024225	Rhizosphere	MDIRRLKGYEAELQTPASEYTVTELNRNHMRQHGERGKNMPRALSVAEMCSIVEAGGGRYVGVMNEIPWKEESIVLFTSPQTRSTLGLLSSRLTVEAVREQLAKSDAAFKTAASK
Ga0257154_10007223	3300026467	Soil	MRTTVRKNACSFVDILRVKNCHMELETATSEYTVTELNRKTMRQHDERGSGMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK
Ga0209010_100004525	3300027370	Forest Soil	MRTSTRKNACSSVDILRAKNYQAERESPPSECKLTELNRKNMPRHDERGSDMPRDFSEAEMSWIVEAGGGRYVGVMNEIPGNVECIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK
Ga0209008_10072843	3300027545	Forest Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK
Ga0209008_10217492	3300027545	Forest Soil	MRTITRKNACSSVDMLRAKNYQAEREAPTGECALTELNRKNMPQHEGRGSDLPRTFSEAEMSWIVQAGGGRYVGVMNEIPGKVGRIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK
Ga0209221_10757451	3300027609	Forest Soil	MRETIRKNVCSSEDILRVKNCQAELDARASKCTVADLNRKNMPQHQEQRSDMPRTLREAEMCRIVEAGGGRYVGLMHEIPGKVKSIVLFTSPQTRSTLALPSARLTVAAVREQLHKSDAAFHNAASK
Ga0209420_100000645	3300027648	Forest Soil	VDILRAKNYQAERESPPSECKLTELNRKNMPRHDERGSDMPRDFSEAEMSWIVEAGGGRYVGVMNEIPGNVECIVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK
Ga0209009_10506552	3300027667	Forest Soil	MQTSLRRNACSSLDIPRMGNYEAELEAPAREYTVTELNRKNIQRHYRRGIKSPPTLSEVEMCWIVAAGGGRYVGVMNEIPGKMESLVLFVSPQTRTTLALPSSRLTVAAVREQLAESDAAFNRSCA
Ga0209333_11915522	3300027676	Forest Soil	NSAMRTTVRKNACSCVDILRVKNCHVELETATSECTVTELNRKTMRRHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK
Ga0209248_100283784	3300027729	Bog Forest Soil	CTSLDILRMENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTLALPSSRPTVAAVRQ
Ga0209655_100005947	3300027767	Bog Forest Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTLALPSSRPTVAAVRQ
Ga0209772_100600562	3300027768	Bog Forest Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVLNEIPGIVESVVLFTSPRTRSTVALPSSRPTVAAVRQ
Ga0209139_100448071	3300027795	Bog Forest Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTVALPSSRPTVAAVRQ
Ga0209274_100023829	3300027853	Soil	MPTTLRKNARSSVHILRVNHYEAELEAPASGYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTAEAVREQLAESDAAFNQAGAK
Ga0209274_100024583	3300027853	Soil	MKNYEAELEAPARKCMVTESNRKDMQQNYESGGNSPSTLSEAEMCSIVAAGGGRYVGVTNEIPGKMESIVLFTSPQTRSTLSLPSSRLTVAAVREQLAESDAAFKPPTSK
Ga0209693_101239712	3300027855	Soil	LNWPPAESDRRRSRLNAAMQMRLRKTACTSVDIPQMENYESELEAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0209169_100058815	3300027879	Soil	MLRVKNSPAELDAPASKCTVADLNRTNMPQHAAQRSDMPRTLSEAEMCQIVEAGGGRYVGLMNEIAGKVESIVLFTSPQTRSTLALPSSRLTVAAVREQLDKSDAAFNDTASE
Ga0209275_100098513	3300027884	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKVTELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAESDAAFNQAGSK
Ga0209275_105192491	3300027884	Soil	EAPARKYTVTDLKQKNSRQHYERGGNLPPTLNESEMCSIVEAGGGRYVGVMNEIPGIVESVVLFTSRRTRSTLALPSSRLTVAAVRQQLADSDAAFNQAGSK
Ga0209380_1000027211	3300027889	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQSRSTLGLPSSRLTVEAVREQLAESDAAFNQAGAK
Ga0209380_101745201	3300027889	Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQHDERGSSMPRTLSEAEMCSIVETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEA
Ga0209624_103497292	3300027895	Forest Soil	GDRRKSRRILASQNHVLNWPPAESIRRRSRLNPAMRTTTRKKACSSGDILRANDCQAERKVPASECTVTELNRKNMPQQDERGSDMPRTFSEAEMSWIIEAGGGRYVGVMNQIPGKVDCIVLFTSPQTRSTLALPRSRLTVEAVREQLAKSDAAFHQAASE
Ga0209006_100000546	3300027908	Forest Soil	MKNYATELETLASECTVTELNGKNMQRHHERGGNTSWILSEAEMCSIVEAGGGRYVGVMREIPGKMEAIVLFISLQTRTTLGLPSSRLTVAAVREQLAESDAAFSQADSK
Ga0265353_10067252	3300028015	Soil	TACTSLDILRMENYESELEVPARKYTVTDLKQKNSQTLYERGSNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTVALPSSRPTVAAVRQ
Ga0308309_1000073413	3300028906	Soil	MENYEAKLEAPATEYTVTELNCKKMKLHCGRDGNSPPTLSEAELRSIVEAGGGRYVGVMNEIPGKMESIVLFTSPQTRSTLGLPSSLLTVAAVREQLADSDAAFNQTRSK
Ga0308309_100445793	3300028906	Soil	MRTTTRKNACSSLDMLRVKNSPAELDAPASKCTVADLNRTNMPQHAAQRSDMPRTLSEAEMCQIVEAGGGRYVGLMNEIAGKVESIVLFTSPQTRSTLALPSSRLTVAAVREQLDKSDAAFNDTASE
Ga0265745_10322171	3300030759	Soil	MRTTLRKNARSSVHILRVNHYEAELEAPASEYKATELNRKNMRQHDETRSNMPGALSEAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLALPSSRLTVEAVREQLAKSDAAFNDAASK
Ga0310686_1010593718	3300031708	Soil	MRTTLGKNACCSVDILRVENYEAQLETPASGHTVTELNWKNMRQHNRRVSNMPRTLSEAEMCSIVEAGGGRYVGVMNEMPGKVESIVLFTSPQTRSTLGLRSSRLTVEAVREQLAKSDAAFNQADSK
Ga0310686_1070277441	3300031708	Soil	RCSRLNRVMRTTLRKNAGYSVDILRVKKYQAELDAPASECMVTGLNWKTMRQHDERRSSMPRTLSEAEMCSIVKSGGGKYVGVMNEIPGKVESIVLFTSPQTRSTLALPSSRLTAEAVREQLAKSDAAFNQAASK
Ga0310686_1070616643	3300031708	Soil	ILRVKDCPAELDAPASQCTVADLNRKNLPQHDEQRSDMPRTLSEAEMCQIVEAGGGRYVGLMNALPGKVESIVLFTSPQTRSTLAFPSSRLTVAAVREQLDKSDAAFNDAAPK
Ga0310686_1106041553	3300031708	Soil	MDNYEAVHEAPAREYTVTELNRKNMRQRYEGGSNSPRTLSPAEMCSIVETGGGRYVGVMNEIPGKVESVVLFTSPQTRSTLGLPSSRLTVEAVREQLAKSDAAFNQAGSK
Ga0310686_1157967852	3300031708	Soil	MTELNCKNIQLHYERGGNSPPTLSEAEVRSTVEAGGGRYVGVMNEIPGKMEAIVLFSSPQTRSTLGLTSSRLTVAAVREQLAESDAAFKAAASK
Ga0310686_1187264762	3300031708	Soil	MRTTVRKNACSFVDILRVKNCHVELETAASECTVTELNRKTMRQSDERGSSMPRTLSEAEMRSIIETGGGRYVGVMNEIPGKVESIVLFTSRQTRSTLALPSSRLSVEAVREQLAKSDAAFNDAASK
Ga0307476_100448833	3300031715	Hardwood Forest Soil	MNVCSSVHILRMKNYATEPETLASEYTVTELNGNNMQRHHERGSNSPWTLSEAEMCSIVEAGGGRYVGVMKEIPGKMEAIVLFISLQTRSTLGLPTSRLTVAAVREQLAESDAAFSRASS
Ga0370515_0028990_558_845	3300034163	Untreated Peat Soil	MENYESELEVPARKYTVTDLKQKNSQTLYERGGNLSPTLSESEMCLIVEAGGGKYVGVMNEIPGIVESVVLFTSPRTRSTLALPSSRPTVAAVRQ
Ga0370515_0182139_493_840	3300034163	Untreated Peat Soil	VDILRVENYQAELEARTNEFTVTELNRKNMPQHDERGSDMPRTLSAAEMCWIVEAGGGRYVGVMNEIPGKVESIVLFTSPQTRSTLALPSSCLTVEAVREQLAKSDAVFNDAASK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095823

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences