NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095834

Metagenome / Metatranscriptome Family F095834

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095834
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 59 residues
Representative Sequence MNPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Number of Associated Samples 55
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 54.29 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 80.95 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (59.048 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil
(44.762 % of family members)
Environment Ontology (ENVO) Unclassified
(66.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(54.286 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.33%    β-sheet: 5.00%    Coil/Unstructured: 66.67%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00072Response_reg 2.86
PF07238PilZ 2.86
PF01740STAS 2.86
PF07486Hydrolase_2 1.90
PF11154DUF2934 1.90
PF00239Resolvase 1.90
PF00990GGDEF 1.90
PF14534DUF4440 1.90
PF00107ADH_zinc_N 0.95
PF12651RHH_3 0.95
PF00027cNMP_binding 0.95
PF01156IU_nuc_hydro 0.95
PF00221Lyase_aromatic 0.95
PF11845DUF3365 0.95
PF04972BON 0.95
PF12779WXXGXW 0.95
PF13460NAD_binding_10 0.95
PF00480ROK 0.95
PF07719TPR_2 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.90
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.90
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.90
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 1.90
COG1957Inosine-uridine nucleoside N-ribohydrolaseNucleotide transport and metabolism [F] 0.95
COG2986Histidine ammonia-lyaseAmino acid transport and metabolism [E] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.05 %
UnclassifiedrootN/A40.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100162537All Organisms → cellular organisms → Bacteria → Acidobacteria2111Open in IMG/M
3300005434|Ga0070709_10025205All Organisms → cellular organisms → Bacteria3512Open in IMG/M
3300006028|Ga0070717_11348557Not Available648Open in IMG/M
3300006175|Ga0070712_101524071Not Available584Open in IMG/M
3300006176|Ga0070765_102033925All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300010048|Ga0126373_10070965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3147Open in IMG/M
3300010048|Ga0126373_10546566Not Available1206Open in IMG/M
3300010048|Ga0126373_11177177Not Available833Open in IMG/M
3300010360|Ga0126372_11233771Not Available773Open in IMG/M
3300010361|Ga0126378_11984326All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300012181|Ga0153922_1025143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus1342Open in IMG/M
3300012202|Ga0137363_10428754Not Available1104Open in IMG/M
3300012202|Ga0137363_11759247Not Available512Open in IMG/M
3300012677|Ga0153928_1074829All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300012917|Ga0137395_10476677Not Available898Open in IMG/M
3300016341|Ga0182035_10111980Not Available2023Open in IMG/M
3300016445|Ga0182038_10214759Not Available1524Open in IMG/M
3300020580|Ga0210403_11343398All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300020581|Ga0210399_10314165All Organisms → cellular organisms → Bacteria → Acidobacteria1308Open in IMG/M
3300020582|Ga0210395_10152926All Organisms → cellular organisms → Bacteria → Acidobacteria1722Open in IMG/M
3300020583|Ga0210401_11491672All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300021171|Ga0210405_10005309All Organisms → cellular organisms → Bacteria → Acidobacteria11825Open in IMG/M
3300021171|Ga0210405_10549515All Organisms → cellular organisms → Bacteria → Acidobacteria902Open in IMG/M
3300021171|Ga0210405_10826663All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula708Open in IMG/M
3300021403|Ga0210397_10089442All Organisms → cellular organisms → Bacteria → Acidobacteria2058Open in IMG/M
3300021407|Ga0210383_10937989All Organisms → cellular organisms → Bacteria → Acidobacteria736Open in IMG/M
3300021432|Ga0210384_10213615All Organisms → cellular organisms → Bacteria → Acidobacteria1736Open in IMG/M
3300021478|Ga0210402_10087065Not Available2789Open in IMG/M
3300021559|Ga0210409_11441890Not Available564Open in IMG/M
3300021560|Ga0126371_10113061All Organisms → cellular organisms → Bacteria2725Open in IMG/M
3300022557|Ga0212123_10002231All Organisms → cellular organisms → Bacteria47801Open in IMG/M
3300027050|Ga0209325_1033366All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300027061|Ga0209729_1000223All Organisms → cellular organisms → Bacteria3474Open in IMG/M
3300027061|Ga0209729_1051286Not Available526Open in IMG/M
3300027071|Ga0209214_1000148All Organisms → cellular organisms → Bacteria3724Open in IMG/M
3300027371|Ga0209418_1020657All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300027371|Ga0209418_1047372All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300027548|Ga0209523_1097309Not Available609Open in IMG/M
3300027605|Ga0209329_1037616Not Available1015Open in IMG/M
3300027635|Ga0209625_1000407All Organisms → cellular organisms → Bacteria → Acidobacteria11127Open in IMG/M
3300027635|Ga0209625_1000866All Organisms → cellular organisms → Bacteria → Acidobacteria7473Open in IMG/M
3300027727|Ga0209328_10199937Not Available603Open in IMG/M
3300027842|Ga0209580_10269840All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300027869|Ga0209579_10014908All Organisms → cellular organisms → Bacteria4547Open in IMG/M
3300027869|Ga0209579_10271922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300027869|Ga0209579_10677628All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300030842|Ga0075404_11311645All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300031057|Ga0170834_110281941All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300031128|Ga0170823_10017314Not Available526Open in IMG/M
3300031128|Ga0170823_11391216All Organisms → cellular organisms → Bacteria → Acidobacteria1089Open in IMG/M
3300031128|Ga0170823_13557748Not Available704Open in IMG/M
3300031231|Ga0170824_120733511Not Available532Open in IMG/M
3300031231|Ga0170824_126421233Not Available602Open in IMG/M
3300031474|Ga0170818_113774287Not Available627Open in IMG/M
3300031718|Ga0307474_10149868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus1760Open in IMG/M
3300031718|Ga0307474_10887016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300031718|Ga0307474_11460830All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300031719|Ga0306917_10526963All Organisms → cellular organisms → Bacteria → Acidobacteria928Open in IMG/M
3300031720|Ga0307469_10056295Not Available2509Open in IMG/M
3300031720|Ga0307469_10106771All Organisms → cellular organisms → Bacteria → Acidobacteria1984Open in IMG/M
3300031720|Ga0307469_10233008Not Available1466Open in IMG/M
3300031720|Ga0307469_10459841All Organisms → cellular organisms → Bacteria → Acidobacteria1104Open in IMG/M
3300031720|Ga0307469_11862197All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300031753|Ga0307477_10128042All Organisms → cellular organisms → Bacteria → Acidobacteria1772Open in IMG/M
3300031753|Ga0307477_10188681All Organisms → cellular organisms → Bacteria → Acidobacteria1435Open in IMG/M
3300031753|Ga0307477_10228705Not Available1290Open in IMG/M
3300031754|Ga0307475_10139391All Organisms → cellular organisms → Bacteria → Acidobacteria1920Open in IMG/M
3300031754|Ga0307475_10200133All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300031754|Ga0307475_10441730All Organisms → cellular organisms → Bacteria → Acidobacteria1045Open in IMG/M
3300031754|Ga0307475_10544486All Organisms → cellular organisms → Bacteria → Acidobacteria931Open in IMG/M
3300031754|Ga0307475_10574807All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300031754|Ga0307475_10742740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300031754|Ga0307475_10829594Not Available733Open in IMG/M
3300031754|Ga0307475_10843850All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300031754|Ga0307475_11115506Not Available617Open in IMG/M
3300031771|Ga0318546_10846242Not Available644Open in IMG/M
3300031820|Ga0307473_11090585Not Available588Open in IMG/M
3300031823|Ga0307478_10574322Not Available942Open in IMG/M
3300031823|Ga0307478_10824733Not Available776Open in IMG/M
3300031823|Ga0307478_11116771Not Available657Open in IMG/M
3300031823|Ga0307478_11141311All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300031962|Ga0307479_10109741All Organisms → cellular organisms → Bacteria2684Open in IMG/M
3300031962|Ga0307479_10200104All Organisms → cellular organisms → Bacteria1967Open in IMG/M
3300031962|Ga0307479_10226424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1844Open in IMG/M
3300031962|Ga0307479_10236349Not Available1802Open in IMG/M
3300031962|Ga0307479_10279442All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300031962|Ga0307479_10330809Not Available1506Open in IMG/M
3300031962|Ga0307479_10464640All Organisms → cellular organisms → Bacteria → Acidobacteria1249Open in IMG/M
3300031962|Ga0307479_10481584All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300031962|Ga0307479_10829346All Organisms → cellular organisms → Bacteria → Acidobacteria899Open in IMG/M
3300031962|Ga0307479_10906847Not Available853Open in IMG/M
3300032076|Ga0306924_10032742All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 835657Open in IMG/M
3300032174|Ga0307470_10182236Not Available1322Open in IMG/M
3300032174|Ga0307470_10540229All Organisms → cellular organisms → Bacteria → Acidobacteria859Open in IMG/M
3300032180|Ga0307471_100487475Not Available1378Open in IMG/M
3300032180|Ga0307471_100593041Not Available1266Open in IMG/M
3300032180|Ga0307471_101281701All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300032180|Ga0307471_101715872Not Available781Open in IMG/M
3300032205|Ga0307472_100014896Not Available4053Open in IMG/M
3300032205|Ga0307472_100042872All Organisms → cellular organisms → Bacteria → Acidobacteria2750Open in IMG/M
3300032205|Ga0307472_100283107Not Available1321Open in IMG/M
3300032205|Ga0307472_100602259All Organisms → cellular organisms → Bacteria → Acidobacteria970Open in IMG/M
3300032205|Ga0307472_101286636Not Available703Open in IMG/M
3300032205|Ga0307472_102314470Not Available544Open in IMG/M
3300033289|Ga0310914_10094851Not Available2556Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil44.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.29%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil11.43%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil6.67%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.71%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.90%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300012181Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaGHost-AssociatedOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012677Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaGHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027071Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300030842Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10016253723300002245Forest SoilMVKVSMTPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA*
Ga0070709_1002520523300005434Corn, Switchgrass And Miscanthus RhizosphereMNLKYDIFKKTGNSVVWVEAVEDIVAAKKRLISLSSTTPGEYELWDSSRQEFINPHGRMRLE*
Ga0070717_1134855723300006028Corn, Switchgrass And Miscanthus RhizosphereMNCKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLRSTTPDEYKLWDSSRQEFINPMDECA
Ga0070712_10152407113300006175Corn, Switchgrass And Miscanthus RhizosphereMNPKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSR
Ga0070765_10203392513300006176SoilFRKADNSVVWVEAVEDIVAAKKHLITLSSTTPCEYKLWDSSRQEFINPVDECA*
Ga0126373_1007096553300010048Tropical Forest SoilMKPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0126373_1054656623300010048Tropical Forest SoilDNSAVWVEAVEDIVAAKKRLISLSTSAPGEYKLWDSSRQEFISPMDACA*
Ga0126373_1117717723300010048Tropical Forest SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSTTAPGEYKLWDSSRQEFINPLDECA
Ga0126372_1123377123300010360Tropical Forest SoilMSPQYDIFKKTDNSVVWVEAVEDIVSAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0126378_1198432623300010361Tropical Forest SoilMNPKYDIFKKTDNSVVWVEAVEDIVSAKKRLISLTTTVPGEYKLWDSSRQEFINPMDECA
Ga0153922_102514323300012181Attine Ant Fungus GardensMVKVSMTPKYNIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA*
Ga0137363_1042875423300012202Vadose Zone SoilMNLKYDIFKKTGNSVVWVEAVEDIVAAKKRLISLSSTAPGDYKLWDSSRQEFINPMDECA
Ga0137363_1175924713300012202Vadose Zone SoilVSPQYDIFKKKDNSVVWVEAVEDIVAAKKRLITLSTTAPGKYKLWDSLRQEFI
Ga0153928_107482923300012677Attine Ant Fungus GardensMTSSRKQITLVLWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA*
Ga0137395_1047667713300012917Vadose Zone SoilMNLKYDIFKKVDNSVVWVEAVEDIVAAKKRLINLSSSAPGDYKLWDSSRQEFINPMDEFA
Ga0182035_1011198013300016341SoilMSPKYDIFKKTANSVVWVEAVEDICAAKKRLISLSTTAPGEYKLWDSLRQEFINPMDECA
Ga0182038_1021475913300016445SoilIFKKTANSVVWVEAVEDIFAAKKRLISLSTTAPGEYKLWDSLRQEFINPMDECA
Ga0210403_1134339823300020580SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLGSTTPCEYKLWDSSRQEFINPMDECA
Ga0210399_1031416523300020581SoilMNPQYDIFKKTDNSVVWVETVEDIVAAKKRLISLGSTTPGEYKLWDSSRQEFINPMDECA
Ga0210395_1015292623300020582SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLGSTTPGEYKLWDSSRQEFINPMDECA
Ga0210401_1149167213300020583SoilYDIFKKTDNSVVWVEAVEDIVAAKKRLISLGSTTPCEYKLWDSSRQEFINPMDECA
Ga0210405_1000530993300021171SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTTPGEYKLWDSSRQEFINPMDECA
Ga0210405_1054951513300021171SoilDIFKKTDNSVVWIEAAEDIVAAKKRLISLSTTAPAEYKRCDSSRQEFINPMDECA
Ga0210405_1082666323300021171SoilVEAVEDIVAAKKRLISLGSTTPCEYKLWDSSRQEFINPMDECA
Ga0210397_1008944213300021403SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTAAPGEYKLWDSSRQEFINPLDECA
Ga0210383_1093798933300021407SoilMSALVEVSMNPQYDIFKKIDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0210384_1021361513300021432SoilIFKKTDNSVVWVEAVEDIVAAKKRLISLGSTTPCEYKLWDSSRQEFINPMDECA
Ga0210402_1008706513300021478SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0210409_1144189013300021559SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTAPGQYKLWDSSRQEFINPMD
Ga0126371_1011306143300021560Tropical Forest SoilMSPQYDIFRKTDNSVVWVEAVEDIVAAKKRLISLRSTTPAEYKLWDSSRQEFINPMDECA
Ga0212123_1000223113300022557Iron-Sulfur Acid SpringMNPKFDIFKKTDNSVVWVEAAEDIVAAKKRLISLNSTTPGDYKLWDSSRQEFINPMDDCA
Ga0209325_103336623300027050Forest SoilMNAQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFISPMDECA
Ga0209729_100022343300027061Forest SoilMNCKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLNSTTPGDYKLWDSSRQEFINPMDDCA
Ga0209729_105128613300027061Forest SoilMNLKYDIFKKTDNSVVWVEAAEDIVAARKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209214_100014853300027071Forest SoilMNAQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209418_102065713300027371Forest SoilKTDNSVVWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA
Ga0209418_104737213300027371Forest SoilMVPKYDIFKKTDDSAVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209523_109730913300027548Forest SoilMNLKYDIFKKTDNSVVWVEAVEDIVTAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209329_103761613300027605Forest SoilMNPKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDDCA
Ga0209625_100040793300027635Forest SoilMTPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA
Ga0209625_100086613300027635Forest SoilMSPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209328_1019993723300027727Forest SoilMVKVSMSPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0209580_1026984013300027842Surface SoilMNPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSAAPGEYKLWDSSRQEFINPMDECA
Ga0209579_1001490843300027869Surface SoilMVSKYDIFKKTDNSVVWIEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFVNPMDECA
Ga0209579_1027192213300027869Surface SoilMIPKYDIFKKTENSVVWIEAVEDIVAAKKRLISLSTAAPGEYKLWDSSRQEFINPMDECA
Ga0209579_1067762813300027869Surface SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLRSTTPCEYKFWDSSRQEFINPMDECA
Ga0075404_1131164513300030842SoilMSPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0170834_11028194113300031057Forest SoilQISQWSRCPMSPKYDIFKKTDNSVVWVEAVQDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0170823_1001731413300031128Forest SoilMSPKYDIFKKTDNSVVWVEAVQDIVAAKKRLISLSSTAPGEYKLWDSSRQEFVNP
Ga0170823_1139121613300031128Forest SoilMSPKHDIFKKTNNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0170823_1355774813300031128Forest SoilMNPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0170824_12073351113300031231Forest SoilMNPKYDIFKKTDNSVIWVEAVEDIAAAKKRLINLSSSTPGEYKLRDSSRQEF
Ga0170824_12642123313300031231Forest SoilMSPKYDIFKKTDNSLVWVEAVQDIVAAKKRLISLSSTAPGEYKLWDSSRQEFVIPMDE
Ga0170818_11377428723300031474Forest SoilMSPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLRSTAPGEYKLWDSSRQEFINPMDECA
Ga0307474_1014986833300031718Hardwood Forest SoilMVKVSMTPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTTGEYKLWDSSRQEFINPMDECA
Ga0307474_1088701623300031718Hardwood Forest SoilKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFVNPMDECA
Ga0307474_1146083013300031718Hardwood Forest SoilKIFFWSEVSTNLKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0306917_1052696313300031719SoilMSPKYDIFKKTANSVVWVEAVEDIFAAKKRLISLSTTAPGEYKLWDSLRQEFINPMDECA
Ga0307469_1005629533300031720Hardwood Forest SoilMNLKYDIFKTTDNSVVWVEAAEDIVAARKRLISLSSTTPGEYKLWDSSRQEFIDPMDEC
Ga0307469_1010677123300031720Hardwood Forest SoilMNPKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307469_1023300813300031720Hardwood Forest SoilVVEVSINPKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLRSTTPDEYKLWDSSRQEFINPMDECA
Ga0307469_1045984123300031720Hardwood Forest SoilMVPKYDIFKKTDNSAVWIEAVEDIVAAKKRLISLSTTTPGEYKLWDSSRQEFINPMDECA
Ga0307469_1186219723300031720Hardwood Forest SoilMNLKYDIFKKTDNSVVWVEAAEDMVTAEKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307477_1012804223300031753Hardwood Forest SoilMNPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307477_1018868113300031753Hardwood Forest SoilMVPEYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307477_1022870513300031753Hardwood Forest SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTAPGEYKLWDSSRQEFVNPMDECA
Ga0307475_1013939133300031754Hardwood Forest SoilMVKVSMSPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0307475_1020013323300031754Hardwood Forest SoilMNPKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGECKLWDSSRQEFVNPMDECA
Ga0307475_1044173023300031754Hardwood Forest SoilMNPQYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKRWDSSRQEFINPMDECA
Ga0307475_1054448613300031754Hardwood Forest SoilMNLKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307475_1057480713300031754Hardwood Forest SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKCLISLSTTAPGEYKLWDSSRQEFINPMDECA
Ga0307475_1074274013300031754Hardwood Forest SoilMNPQYDIFKKKDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0307475_1082959413300031754Hardwood Forest SoilMVPKYDIFKKTDNSAVWIEAVEDIVAAKKRLISLGTAEPGEYKLWDSSRQEFINPMDECA
Ga0307475_1084385013300031754Hardwood Forest SoilMNPQYDIFKKTDNSVVWIEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307475_1111550613300031754Hardwood Forest SoilMNPKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEF
Ga0318546_1084624213300031771SoilMSPKYDIFKKTANSVVWVEAVEDIFAAKKRLISLSTTAPGEYKLWDSLRQEFINPMDE
Ga0307473_1109058523300031820Hardwood Forest SoilPKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLRSTTPDEYKLWDSSRQEFINPMDECA
Ga0307478_1057432213300031823Hardwood Forest SoilMNPKFDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTAPGDYKLWDSSRQE
Ga0307478_1082473313300031823Hardwood Forest SoilMFSVSAHLSSVEVSMNPKFDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTAPGDYKLWDSSRQE
Ga0307478_1111677113300031823Hardwood Forest SoilKTDNSVVWVEAAEDIVAAKKRLISLSSTAPGDYKLWDSSRQEFINPMDDCA
Ga0307478_1114131113300031823Hardwood Forest SoilKKKDNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0307479_1010974123300031962Hardwood Forest SoilVSVVPKYDIFKKTDNSAVWVEAVEDIVAAKKCLISLSTTAPGEYKLWDSSRQEFINPMDECA
Ga0307479_1020010413300031962Hardwood Forest SoilNPKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFVNPMDECA
Ga0307479_1022642443300031962Hardwood Forest SoilVEVSVSPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSATPGEYKLWDSLRQEFVNPLDECA
Ga0307479_1023634913300031962Hardwood Forest SoilEVSMNPKFDIFKKTDNSVVWVEAAEDIVAAKKRLINLSSTAPGDYKLWDSSRQEFINPMDDCA
Ga0307479_1027944213300031962Hardwood Forest SoilMFSVSAHLSSVEVSMNPKFDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSTAPGDYKLWDSSRQEFINPMDDCA
Ga0307479_1033080913300031962Hardwood Forest SoilMNPKFDIFKKTGNSVVWVEAAEDIVAAKKRLISLNSTTPGDYKLWDSSRQEFINPMDDCA
Ga0307479_1046464013300031962Hardwood Forest SoilKYDIFKKTDNSVVWVEAAEDIVAAKKRLISLSSATPGEYKLWDSSRQEFINPMDECA
Ga0307479_1048158413300031962Hardwood Forest SoilMVGVSMNCKYDIFKKVDNSVVWVEAVEDIVAAKKRLINLSSSAPGDYKLWDASRQEFVNPMDECA
Ga0307479_1082934613300031962Hardwood Forest SoilMNPKYDIFRKTDNSVVWVEAAEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307479_1090684723300031962Hardwood Forest SoilMTPKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0306924_1003274213300032076SoilMTIIPKYDIFRKTNGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKE
Ga0307470_1018223623300032174Hardwood Forest SoilKTDNSAVWVEAVEDIVAAKKRLISLSTAAPGEYKLWDSSRQEFINPMDECA
Ga0307470_1054022923300032174Hardwood Forest SoilMNLKYDIFKKTDNSVVWVEAVEDIVAAKKRLISLSYTTPGEYKLWDSSRQEFINPMDECA
Ga0307471_10048747523300032180Hardwood Forest SoilYDIFKKTDNSAVWVEAVEDIVVAKKRLISLSTAAPGEYKLWDSSRQEFINPMDECA
Ga0307471_10059304123300032180Hardwood Forest SoilMNLKYDIFKTTDNSVVWVEAAEDIVAARKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307471_10128170123300032180Hardwood Forest SoilKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTAPGDYKLWDSSRQEFINPMDECA
Ga0307471_10171587213300032180Hardwood Forest SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTMPGEYKLWDSSRQEFINPMDEC
Ga0307472_10001489623300032205Hardwood Forest SoilMNPKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLRSTTPDEYKLWDSSRQEFINPMDECA
Ga0307472_10004287223300032205Hardwood Forest SoilMNLKYDIFKKTDNSVVWVEAAEDIVTAKKRLISLSSTTPGEYKLWDSSRQEFINPMDECA
Ga0307472_10028310733300032205Hardwood Forest SoilMVPKYDIFKKTDNSAVWVEAVEDIVAAKKRLISLSTTTPGEYKLWDSSRQEFINPM
Ga0307472_10060225923300032205Hardwood Forest SoilMNPKYDIFKKTDNSFVWVEAVEDIVAAKKRLISLGSTTPGEYKLWDSSRQEFINPMDECA
Ga0307472_10128663613300032205Hardwood Forest SoilMNPKFDIFKKTDNSVVWVEAAEDIGAAKKRLINLSSTAPGDYKLWDSSRQEFINPMDDCA
Ga0307472_10231447023300032205Hardwood Forest SoilMNLKYDIFKKTGNSVVWVEAVEDIVAAKKRLISLSSTAPGEYKLWDSSRQEFINPMDECA
Ga0310914_1009485153300033289SoilKKTANSVVWVEAVEDIFAAKKRLISLSTTAPGEYKLWDSLRQEFINPMDECA


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