Metagenome Family F095919

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095919
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	60 residues
Representative Sequence	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYLGVGP
Number of Associated Samples	72
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.92 %
% of genes near scaffold ends (potentially truncated)	27.62 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.905 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.49% β-sheet: 37.21% Coil/Unstructured: 59.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.5.0: automated matches	d3a5zb1	3a5z	0.73705
b.34.5.0: automated matches	d3hksa1	3hks	0.7314
b.34.5.0: automated matches	d6s8za1	6s8z	0.72954
b.34.5.2: eIF5a N-terminal domain-like	d1bkba1	1bkb	0.7293
b.34.5.2: eIF5a N-terminal domain-like	d1ueba1	1ueb	0.70737

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01434	Peptidase_M41	5.71
PF00072	Response_reg	5.71
PF04392	ABC_sub_bind	3.81
PF01381	HTH_3	2.86
PF01255	Prenyltransf	2.86
PF04972	BON	1.90
PF01590	GAF	1.90
PF01593	Amino_oxidase	0.95
PF02746	MR_MLE_N	0.95
PF00106	adh_short	0.95
PF00011	HSP20	0.95
PF05930	Phage_AlpA	0.95
PF13378	MR_MLE_C	0.95
PF00528	BPD_transp_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	5.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.81
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	2.86
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
All Organisms	root	All Organisms	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
cellular organisms	root	All Organisms → cellular organisms	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.43 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	8.57 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.57 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.57 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.95 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.57 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.95 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig60169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1588	Open in IMG/M
2162886007\|SwRhRL2b_contig_106472	Not Available	992	Open in IMG/M
2170459013\|GO6OHWN02H6R8F	Not Available	517	Open in IMG/M
3300000559\|F14TC_100332559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1052146	Not Available	629	Open in IMG/M
3300001431\|F14TB_101235309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300002899\|JGIcombinedJ43975_10109992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300004268\|Ga0066398_10103707	Not Available	663	Open in IMG/M
3300005294\|Ga0065705_11175590	Not Available	506	Open in IMG/M
3300005332\|Ga0066388_101417196	Not Available	1208	Open in IMG/M
3300005332\|Ga0066388_101768229	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005332\|Ga0066388_103334298	Not Available	820	Open in IMG/M
3300005440\|Ga0070705_101499548	Not Available	565	Open in IMG/M
3300005713\|Ga0066905_100179775	Not Available	1559	Open in IMG/M
3300005713\|Ga0066905_100452632	Not Available	1056	Open in IMG/M
3300005713\|Ga0066905_100597859	Not Available	933	Open in IMG/M
3300005713\|Ga0066905_101506466	Not Available	612	Open in IMG/M
3300005937\|Ga0081455_10000380	All Organisms → cellular organisms → Bacteria	58685	Open in IMG/M
3300005937\|Ga0081455_11015244	Not Available	513	Open in IMG/M
3300005981\|Ga0081538_10197203	Not Available	833	Open in IMG/M
3300006049\|Ga0075417_10010761	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300006049\|Ga0075417_10301590	Not Available	777	Open in IMG/M
3300006058\|Ga0075432_10026261	Not Available	2000	Open in IMG/M
3300006173\|Ga0070716_101255564	Not Available	597	Open in IMG/M
3300006194\|Ga0075427_10004508	Not Available	1955	Open in IMG/M
3300006797\|Ga0066659_10880516	Not Available	747	Open in IMG/M
3300006797\|Ga0066659_10964681	Not Available	713	Open in IMG/M
3300006844\|Ga0075428_102352398	Not Available	548	Open in IMG/M
3300006846\|Ga0075430_100225446	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300006846\|Ga0075430_101298211	Not Available	599	Open in IMG/M
3300006852\|Ga0075433_10456179	Not Available	1126	Open in IMG/M
3300006852\|Ga0075433_11043629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300006854\|Ga0075425_102024094	Not Available	644	Open in IMG/M
3300006880\|Ga0075429_100234511	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300006914\|Ga0075436_100229580	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300006969\|Ga0075419_10074678	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300007076\|Ga0075435_101553051	Not Available	581	Open in IMG/M
3300009081\|Ga0105098_10458136	Not Available	643	Open in IMG/M
3300009100\|Ga0075418_10033707	All Organisms → cellular organisms → Bacteria	5566	Open in IMG/M
3300009147\|Ga0114129_10503800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1581	Open in IMG/M
3300009157\|Ga0105092_10050216	Not Available	2238	Open in IMG/M
3300009157\|Ga0105092_10065967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1956	Open in IMG/M
3300009157\|Ga0105092_10088092	Not Available	1694	Open in IMG/M
3300009157\|Ga0105092_10218203	Not Available	1068	Open in IMG/M
3300009157\|Ga0105092_10790537	Not Available	556	Open in IMG/M
3300009162\|Ga0075423_10982640	Not Available	896	Open in IMG/M
3300009168\|Ga0105104_10117291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1434	Open in IMG/M
3300009168\|Ga0105104_10955626	Not Available	505	Open in IMG/M
3300009799\|Ga0105075_1012384	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009801\|Ga0105056_1032644	Not Available	682	Open in IMG/M
3300009811\|Ga0105084_1015452	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300009811\|Ga0105084_1057101	Not Available	697	Open in IMG/M
3300009818\|Ga0105072_1002069	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300009821\|Ga0105064_1039446	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300009837\|Ga0105058_1030005	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009837\|Ga0105058_1097075	Not Available	690	Open in IMG/M
3300010046\|Ga0126384_10332712	Not Available	1260	Open in IMG/M
3300010046\|Ga0126384_10598729	Not Available	965	Open in IMG/M
3300010046\|Ga0126384_12147852	Not Available	536	Open in IMG/M
3300010047\|Ga0126382_10104403	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300010047\|Ga0126382_10301176	Not Available	1204	Open in IMG/M
3300010047\|Ga0126382_10564021	Not Available	929	Open in IMG/M
3300010047\|Ga0126382_10730682	Not Available	834	Open in IMG/M
3300010047\|Ga0126382_11288015	Not Available	660	Open in IMG/M
3300010047\|Ga0126382_11792779	Not Available	577	Open in IMG/M
3300010359\|Ga0126376_12072410	Not Available	612	Open in IMG/M
3300010366\|Ga0126379_10424796	Not Available	1384	Open in IMG/M
3300010398\|Ga0126383_10906397	Not Available	968	Open in IMG/M
3300010398\|Ga0126383_13381353	Not Available	521	Open in IMG/M
3300012022\|Ga0120191_10066598	Not Available	669	Open in IMG/M
3300012201\|Ga0137365_10759813	Not Available	708	Open in IMG/M
3300012208\|Ga0137376_10089277	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2597	Open in IMG/M
3300012211\|Ga0137377_10625115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1013	Open in IMG/M
3300012353\|Ga0137367_10415889	Not Available	952	Open in IMG/M
3300012355\|Ga0137369_10384501	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012356\|Ga0137371_11099625	Not Available	598	Open in IMG/M
3300012358\|Ga0137368_10240045	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300012929\|Ga0137404_10084802	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2520	Open in IMG/M
3300012948\|Ga0126375_10500995	Not Available	905	Open in IMG/M
3300012948\|Ga0126375_11098534	Not Available	655	Open in IMG/M
3300012971\|Ga0126369_11845437	Not Available	693	Open in IMG/M
3300016294\|Ga0182041_10248918	Not Available	1445	Open in IMG/M
3300016422\|Ga0182039_12215471	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_10373183	Not Available	1565	Open in IMG/M
3300027006\|Ga0209896_1040650	Not Available	535	Open in IMG/M
3300027032\|Ga0209877_1016596	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027056\|Ga0209879_1039305	Not Available	778	Open in IMG/M
3300027577\|Ga0209874_1002063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6190	Open in IMG/M
3300027646\|Ga0209466_1000532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7929	Open in IMG/M
3300027646\|Ga0209466_1107430	Not Available	566	Open in IMG/M
3300027654\|Ga0209799_1019861	Not Available	1471	Open in IMG/M
3300027722\|Ga0209819_10041095	Not Available	1579	Open in IMG/M
3300027722\|Ga0209819_10090465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1067	Open in IMG/M
3300027722\|Ga0209819_10332240	Not Available	520	Open in IMG/M
3300027873\|Ga0209814_10025776	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300027873\|Ga0209814_10045841	Not Available	1822	Open in IMG/M
3300027873\|Ga0209814_10268527	Not Available	741	Open in IMG/M
3300027874\|Ga0209465_10027396	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300027880\|Ga0209481_10006213	All Organisms → cellular organisms → Bacteria	5077	Open in IMG/M
3300027880\|Ga0209481_10653834	Not Available	545	Open in IMG/M
3300031719\|Ga0306917_10630391	Not Available	843	Open in IMG/M
3300031720\|Ga0307469_10357117	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300031941\|Ga0310912_10867190	Not Available	696	Open in IMG/M
3300031954\|Ga0306926_10671934	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.29%
Host-Associated	Host-Associated	25.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.81%
Plants	Host-Associated → Plants	25.71%
Aquatic	Environmental → Aquatic	10.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.90%
Freshwater	Environmental → Aquatic → Freshwater	10.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.90%
Loam	Environmental → Terrestrial → Soil → Loam	15.24%
Sand	Environmental → Terrestrial → Soil → Sand	11.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.43%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_01311840	2124908045	Soil	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP
SwRhRL2b_0784.00004970	2162886007	Switchgrass Rhizosphere	MSKKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLGVGP
N57_08289430	2170459013	Grass Soil	VKGQAMFKKAKDITVGETVFNRGQTFIVKEIRVDADHNWIVFLDTEGFFHGSYHPDEYLGVGP
F14TC_1003325592	3300000559	Soil	MSKKAKDITVGETVFNRGQSFIVKEVRVDVEQGWIAFLDTEGFWHGWYHPDEYFGVGP*
AF_2010_repII_A01DRAFT_10521461	3300000580	Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKDVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVRE
F14TB_1012353093	3300001431	Soil	MSKKAKDITVGETVFNRGQSFIVKEVRVDVEQGWIAFLDTEGFWHGWYHPDEYLGVGP*
JGIcombinedJ43975_101099922	3300002899	Soil	MSKKAKDITVGETVFNRGQSFIVKEVRADVDQGWIAFLDTEGFWHGWYHPDEYLGVGP*
Ga0066398_101037072	3300004268	Tropical Forest Soil	MKKAKDIKPGDIVFNRGQKFVVKEVSVDERHGWIMFLDTEGLWRGPYHPEEYLGVQE*
Ga0065705_111755902	3300005294	Switchgrass Rhizosphere	MFKKAKDITAGETVFDRGQSFIVKEVRVNQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT*
Ga0066388_1014171961	3300005332	Tropical Forest Soil	MFKKAKDIKPGETVFNSGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHPDEYLGVGE
Ga0066388_1017682293	3300005332	Tropical Forest Soil	KAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPMNT*
Ga0066388_1033342982	3300005332	Tropical Forest Soil	MFKKARDIKRGETVFDRGQSFIVKEVRVDTEHGWVGIAFLDTEGVWHGFYHPDEYLGVGE
Ga0070705_1014995481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MFKKAKDITAGETVFDRGQSFIVKEVRMDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT*
Ga0066905_1001797754	3300005713	Tropical Forest Soil	MKKAKDIKPGDIVFNRGQKFVVKEVSVDERFGWILFLDTEGLWRGPYHPEEYLGVQE*
Ga0066905_1004526324	3300005713	Tropical Forest Soil	GDEPMFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIALLDTEGVWHGFYHPDEYLGVEE*
Ga0066905_1005978593	3300005713	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPHEYLGVKEGYDHES*
Ga0066905_1015064661	3300005713	Tropical Forest Soil	EGNPMKKAKDIKPGDIVFNRGQKFVVKEVSVDEGFGWILFLDTEGLWHGPYHPDEYLGVEE*
Ga0081455_100003808	3300005937	Tabebuia Heterophylla Rhizosphere	MFKKAKDITVGEKVHDLGKTFIVKEVRADAEHGWIAFLDTEGFWHGVYHPSEYLWVGE*
Ga0081455_110152442	3300005937	Tabebuia Heterophylla Rhizosphere	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVRNESNQF*
Ga0081538_101972033	3300005981	Tabebuia Heterophylla Rhizosphere	MKKAKDIKPGDIVFNRGQKFVVKEVRVDERTGWILFLDTEGLWRGPYHPDEYLAVDE*
Ga0075417_100107614	3300006049	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYLGVGP*
Ga0075417_103015902	3300006049	Populus Rhizosphere	MFKKAKDITAGETVFDRGQSFIVKEVRVDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT*
Ga0075432_100262612	3300006058	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEFRVDAEHGWIAFLDTEGIWHGWYHPDEYLGVGS*
Ga0070716_1012555642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFKKAKDITSGETVFDRGQSFIVKEVRMDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT*
Ga0075427_100045082	3300006194	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP*
Ga0066659_108805162	3300006797	Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHADEYLGVGE
Ga0066659_109646812	3300006797	Soil	MFKKARDITVSETVFDSGQSFIVKEVRVHPEHGWIAFIDTEGFWHGWYHPDEYLGVGP*
Ga0075428_1023523982	3300006844	Populus Rhizosphere	MFKKAKDITVGETVFNRGQTFIVTEIRVDADHGWIGFRDTEGFFHGWYHPDEYLGVGP
Ga0075430_1002254463	3300006846	Populus Rhizosphere	VAGLCRKFGKQPMSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYVGVGP*
Ga0075430_1012982112	3300006846	Populus Rhizosphere	TRKGKPMSKKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLGVGS*
Ga0075433_104561792	3300006852	Populus Rhizosphere	MFKKAKDITVGETVFNRGQTFIVTEIRVDADHGWIGFRDTEGFFHGWYHPDEYLGVGP*
Ga0075433_110436292	3300006852	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYVGVGP*
Ga0075425_1020240941	3300006854	Populus Rhizosphere	MFKKAKDITSGETVFDRGQSFIVKEVRVDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT*
Ga0075429_1002345111	3300006880	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYL
Ga0075436_1002295803	3300006914	Populus Rhizosphere	KKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLGVGS*
Ga0075419_100746785	3300006969	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYLGVG
Ga0075435_1015530512	3300007076	Populus Rhizosphere	MFKKAKDITVGETVFNRGQTFIVTEIRVDADHGWIGFRDTEGFFHGWYHPDEYLGV
Ga0105098_104581361	3300009081	Freshwater Sediment	MFKKAKDITAGETVFNRSQSFIVKEVRVDAEHGWIAFLDTEGFWHGWYHPDEYLGVSP*
Ga0075418_100337075	3300009100	Populus Rhizosphere	MSKKAKDITVGETVFNRGQSFIVKEFRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP*
Ga0114129_105038003	3300009147	Populus Rhizosphere	VEAPPQRVAGLCRKFGKQPMSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYLGVGP*
Ga0114129_114927711	3300009147	Populus Rhizosphere	MFKKAKDINPGDHVFDRGKSFTVKEVRVDETQDMIAFLDTEGFWRGPYHPEEYLGISSN*
Ga0105092_100502165	3300009157	Freshwater Sediment	MFKKAKDIKPGETVFNRGQRFIVKEVRVDVEHGWIAFVDTEDFVHGWYHPNEYLGVEE*
Ga0105092_100659674	3300009157	Freshwater Sediment	MKKAKDITVGETVFNRSQSFIVKEVRVDAEHGWIAFLDTEGFWHGWYHPDEYLRVGE*
Ga0105092_100880923	3300009157	Freshwater Sediment	MFKKAKDIKPGETVFNRGQRFIVKEVRVDAEHGWIAFLDAEGFVHGWYHPDEYLGVGE*
Ga0105092_102182031	3300009157	Freshwater Sediment	MFKKAKDIKPGETVFNKGQRFIVKEVRVDVEHGWIAFVDTEDFVHGWYHPNEYLGVEE*
Ga0105092_107905373	3300009157	Freshwater Sediment	TAGETVFNRSQSFIVKEVRVDAEHGWIAFLDTEGFWHGWYDPDEYLGVGP*
Ga0075423_109826403	3300009162	Populus Rhizosphere	SKKAKDITVGETVFNRGQSFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP*
Ga0105104_101172914	3300009168	Freshwater Sediment	MSKKAKDITVGETVFNRGTSFIVKEVRVETEHSWFGIAFLDTEGIWHGWYHPDEYLGVGP
Ga0105104_109556261	3300009168	Freshwater Sediment	MKKAKDITVGETVFDLGQSFIVKEVHVNAQHGWIAFLDTEGFWHGWYHPDEYLRIGE*
Ga0105075_10123843	3300009799	Groundwater Sand	MKKAKDIIVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVGE*
Ga0105056_10326441	3300009801	Groundwater Sand	MKRAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVGE*
Ga0105084_10154523	3300009811	Groundwater Sand	MKRAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP*
Ga0105084_10571012	3300009811	Groundwater Sand	MKKAKDITVGETVFDQGQRFVVKEIRVEHGEIAFVDTEGVFHGPYHPDEYLGVRE*
Ga0105072_10020694	3300009818	Groundwater Sand	MKKAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVGE*
Ga0105064_10394462	3300009821	Groundwater Sand	MKRAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLTVDP*
Ga0105058_10300051	3300009837	Groundwater Sand	TVGETVFDQGQRFVVKEIRVEHGEIAFVDTEGVFHGPYHPDEYLGVRE*
Ga0105058_10970751	3300009837	Groundwater Sand	MSKKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLRVGP
Ga0126384_103327121	3300010046	Tropical Forest Soil	MFKKARDIKRGETVFDRGQSFIVKEVRVDTEHGWVGIAFLDTEGVWHGFYHPDEYLGVGNEANQL*
Ga0126384_105987291	3300010046	Tropical Forest Soil	MFKKAKDIKPGETVLNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVKEGHDHES*
Ga0126384_121478521	3300010046	Tropical Forest Soil	MKKAKDIKPGDIVFNRGQKFVVKEVSVDERFGWILFLDTEGLWRGPYHPDEYLGVEE*
Ga0126382_101044032	3300010047	Tropical Forest Soil	MKKAKDIKPGDIVFNKGQKFVVKEVSVDERHGWIMFLDTEGLWRGPYHPEEYLGVQE*
Ga0126382_103011762	3300010047	Tropical Forest Soil	GGPGDEPMFKKAKDIKPGETVFNRGTSFIVKDVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVRE*
Ga0126382_105640211	3300010047	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVKEGYDHES*
Ga0126382_107306821	3300010047	Tropical Forest Soil	KPGDIVFNRGQKFVVKEVSVDEGFGWILFLDTEGLWHGPYHPDEYLGVEE*
Ga0126382_112880152	3300010047	Tropical Forest Soil	SRSEVIQINPTPTWEGKPMKKAKDIKPGDIGFNKCQKFVVKEVSVDERYGWVMFLDTEGLWRGPYHPEEYLGVEE*
Ga0126382_117927791	3300010047	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGIRE
Ga0126376_120724101	3300010359	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVRE
Ga0126379_104247962	3300010366	Tropical Forest Soil	GNPMKKAKDIKPGDIVFNGGQKSVVKEVSVDERFGWILFLDTEDLWRGPYHPDEYLGVEE
Ga0126383_109063971	3300010398	Tropical Forest Soil	KDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVKEGYDHES*
Ga0126383_133813532	3300010398	Tropical Forest Soil	GDEPMFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGHYHPDEYLGVEE*
Ga0120191_100665981	3300012022	Terrestrial	MKKAKDIKPGDIVFNRGQKFVVKEVSVDERDGWIVFLDTEGLWRGPYHPEEYLGVEE*
Ga0137365_107598131	3300012201	Vadose Zone Soil	MFKKAKDITVGETVFDRGQRFIVKEVRVCDKDGLIGFLDTEGIFHGPYHPDEYLGVGE*
Ga0137376_100892772	3300012208	Vadose Zone Soil	MFKKAKDIKPGETVFNSGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHADEYLGVGE
Ga0137377_106251153	3300012211	Vadose Zone Soil	GDEPMFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHADEYLGVGE*
Ga0137367_104158891	3300012353	Vadose Zone Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDQEHGWIDFMDMQGLVHGWYHPEEYLGVNINSQNT*
Ga0137369_103845013	3300012355	Vadose Zone Soil	MKKAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEDFWHGVYHPDEYLRVGE*
Ga0137371_110996252	3300012356	Vadose Zone Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHPDEYLGVG
Ga0137368_102400454	3300012358	Vadose Zone Soil	MKKAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVG
Ga0137404_100848023	3300012929	Vadose Zone Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHSDEYLGVGE
Ga0126375_105009951	3300012948	Tropical Forest Soil	MFKKARDIKPGETVFNRGTSFIVKDVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVRE
Ga0126375_110985341	3300012948	Tropical Forest Soil	EPMFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGHYHPDEYLGVEE*
Ga0126369_118454371	3300012971	Tropical Forest Soil	MKKAKDIKPGDIVFNGGQKSVVKEVSVDERFGWILFLDTEDLWRGPYHPDEYLGVEE*
Ga0182041_102489181	3300016294	Soil	MSKKAKDITVGETVFNSGQSFIVKEVRVHAEHGWIAFMDTEGFWHGWYHPDEYLGVGP
Ga0182039_122154711	3300016422	Soil	MSKKAKDITVGETVFNSGQSFIVKEVRVHAERGWVAFIDTEGFWHGWYHPDEYLGVGP
Ga0126371_103731832	3300021560	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKDVRVDAEHGWIGIAFLDTEGVWHGHYHPDEYLGVEE
Ga0209896_10406502	3300027006	Groundwater Sand	MKRAKDITVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVGE
Ga0209877_10165961	3300027032	Groundwater Sand	MKKAKDIIVGETVFDRGQRFIVKEVRVDAEHGWIAFLDTEGFWHGVYHPDEYLRVGE
Ga0209879_10393052	3300027056	Groundwater Sand	MKKAKDITVGETVFDQGQRFVVKEIRVEHGEIAFVDTEGVFHGPYHPDEYLGVRE
Ga0209874_10020631	3300027577	Groundwater Sand	VGETVFDQGQRFVVKEIRVEHGEIAFVDTEGVFHGPYHPDEYLGVRE
Ga0209466_10005326	3300027646	Tropical Forest Soil	MKKAKDIKPGDIVFNRGQKFVVKEVSVDERHGWIMFLDTEGLWRGPYHPEEYLGVQE
Ga0209466_11074301	3300027646	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGHYHPDEYLGVEE
Ga0209799_10198612	3300027654	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKDVRVDAEHGWIGIAFLDTEGVWHGFYHPDEYLGVKEGYDHES
Ga0209819_100410952	3300027722	Freshwater Sediment	MFKKAKDIKPGETVFNRGQRFIVKEVRVDVEHGWIAFVDTEDFVHGWYHPNEYLGVEE
Ga0209819_100904652	3300027722	Freshwater Sediment	MLKKTKDITAGETVFNRSQSFIVKEVRVDAEHGWIAFLDTEGFWHGWYDPDEYLGVGP
Ga0209819_103322401	3300027722	Freshwater Sediment	WKGKPMSKKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLGVGP
Ga0209814_100257764	3300027873	Populus Rhizosphere	PMSKKAKDITVGETVFNRGQSFIVKEVRVDAEQGWIAFLDTEGFWHGWYHPDEYLGVGP
Ga0209814_100458414	3300027873	Populus Rhizosphere	PMSKKAKDITVGETVFNRGQSFIVKEVRVDAEHGWIAFLDTEGIWHGWYHPDEYLRVGP
Ga0209814_102685272	3300027873	Populus Rhizosphere	MFKKAKDITAGETVFDRGQSFIVKEVRMDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT
Ga0209465_100273962	3300027874	Tropical Forest Soil	MFKKAKDIKPGETVFNRGTSFIVKEVRVDAEHGWIGIAFLDTEGVWHGLYHPDEYLGVGE
Ga0209481_100062133	3300027880	Populus Rhizosphere	MSKKAKDITVGETVFNRGTSFIVKEVRVDTEHGWIGIAFLDTEGIWHGWYHPDEYLGVGS
Ga0209481_106538342	3300027880	Populus Rhizosphere	MFKKAKDITSGETVFDRGQSFIVKEVRMDQEHGWIAFMDTQGLVHGWYH
Ga0306917_106303911	3300031719	Soil	MSKKAKDITVGETVFNSGQSFIVKEVRVHAEHGWIAFIDTEGFWHGWYHPDEYLGVGP
Ga0307469_103571172	3300031720	Hardwood Forest Soil	MFKKAKDITSGETVFDRGQSFIVKEVRMDQEHGWIAFMDTQGLVHGWYHPEEYLGVNINSQNT
Ga0310912_108671901	3300031941	Soil	NFNLTWKGKAMSKKAKDITVGEIVFNRGQTFIVKEVRVHAERGWVAFIDTEGFWHGWYHPDEYLGIGP
Ga0306926_106719342	3300031954	Soil	MSKKAKDITVGEIVFNRGQTFIVKEVRVHAEHGWIAFMDTEGFWHGWYHPDEYLGVGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences