Metagenome / Metatranscriptome Family F095921

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095921
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	132 residues
Representative Sequence	RHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.46 %
% of genes near scaffold ends (potentially truncated)	80.95 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.810 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.952 % of family members)
Environment Ontology (ENVO)	Unclassified (53.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 12.12% Coil/Unstructured: 57.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00484	Pro_CA	5.71
PF00171	Aldedh	3.81
PF00491	Arginase	2.86
PF08922	DUF1905	1.90
PF10604	Polyketide_cyc2	1.90
PF00496	SBP_bac_5	0.95
PF06736	TMEM175	0.95
PF00583	Acetyltransf_1	0.95
PF12680	SnoaL_2	0.95
PF04075	F420H2_quin_red	0.95
PF11578	DUF3237	0.95
PF02371	Transposase_20	0.95
PF00589	Phage_integrase	0.95
PF01850	PIN	0.95
PF00563	EAL	0.95
PF00248	Aldo_ket_red	0.95
PF04909	Amidohydro_2	0.95
PF02738	MoCoBD_1	0.95
PF00782	DSPc	0.95
PF01370	Epimerase	0.95
PF01968	Hydantoinase_A	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	5.71
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	3.81
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	3.81
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	3.81
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	2.86
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.95
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.95
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.95
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
All Organisms	root	All Organisms	36.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
cellular organisms	root	All Organisms → cellular organisms	36.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.76 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	4.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.95 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.95 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.95 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.95 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	4.76 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	4.76 %
Thermocrispum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum	2.86 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.95 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	4.76 %
Nocardioides speluncae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	4.76 %
Thermocrispum agreste	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste	2.86 %
Nocardia vinacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	0.95 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.81 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	4.76 %
Nocardioides speluncae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	4.76 %
Thermocrispum agreste	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste	2.86 %
Cellulomonas sp. P24	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. P24	0.95 %
Nocardia vinacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig24803	Not Available	618	Open in IMG/M
3300001356\|JGI12269J14319_10198392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	792	Open in IMG/M
3300001661\|JGI12053J15887_10244646	Not Available	894	Open in IMG/M
3300005179\|Ga0066684_10918869	Not Available	570	Open in IMG/M
3300005332\|Ga0066388_101926386	Not Available	1056	Open in IMG/M
3300005332\|Ga0066388_102228479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300005434\|Ga0070709_10617161	Not Available	836	Open in IMG/M
3300005439\|Ga0070711_100110087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2020	Open in IMG/M
3300005467\|Ga0070706_100144894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	2218	Open in IMG/M
3300005610\|Ga0070763_10967550	Not Available	509	Open in IMG/M
3300006173\|Ga0070716_101195662	Not Available	610	Open in IMG/M
3300006755\|Ga0079222_11365428	Not Available	652	Open in IMG/M
3300006806\|Ga0079220_10028693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2439	Open in IMG/M
3300007255\|Ga0099791_10344938	Not Available	713	Open in IMG/M
3300007258\|Ga0099793_10502081	Not Available	603	Open in IMG/M
3300009137\|Ga0066709_102552084	Not Available	687	Open in IMG/M
3300009792\|Ga0126374_10050705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2103	Open in IMG/M
3300010043\|Ga0126380_10042313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2400	Open in IMG/M
3300010043\|Ga0126380_10447790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	975	Open in IMG/M
3300010046\|Ga0126384_10227811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	1493	Open in IMG/M
3300010048\|Ga0126373_10574624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1177	Open in IMG/M
3300010048\|Ga0126373_11425456	Not Available	758	Open in IMG/M
3300010362\|Ga0126377_12677474	Not Available	574	Open in IMG/M
3300010366\|Ga0126379_11467125	Not Available	788	Open in IMG/M
3300010401\|Ga0134121_10189591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1773	Open in IMG/M
3300010880\|Ga0126350_11072405	Not Available	910	Open in IMG/M
3300011269\|Ga0137392_10256170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	1441	Open in IMG/M
3300012207\|Ga0137381_11124597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300012207\|Ga0137381_11165347	Not Available	662	Open in IMG/M
3300012363\|Ga0137390_10427988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	1301	Open in IMG/M
3300013296\|Ga0157374_10851633	Not Available	928	Open in IMG/M
3300014501\|Ga0182024_10144614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3354	Open in IMG/M
3300015371\|Ga0132258_10488392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3077	Open in IMG/M
3300016270\|Ga0182036_11300195	Not Available	607	Open in IMG/M
3300016294\|Ga0182041_11015031	Not Available	750	Open in IMG/M
3300016319\|Ga0182033_10388714	Not Available	1176	Open in IMG/M
3300016319\|Ga0182033_10614901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	945	Open in IMG/M
3300016319\|Ga0182033_11172278	Not Available	688	Open in IMG/M
3300016387\|Ga0182040_10558086	Not Available	922	Open in IMG/M
3300017928\|Ga0187806_1017650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2045	Open in IMG/M
3300017974\|Ga0187777_10148082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1565	Open in IMG/M
3300018060\|Ga0187765_10124452	Not Available	1431	Open in IMG/M
3300020021\|Ga0193726_1123839	Not Available	1150	Open in IMG/M
3300021403\|Ga0210397_10533238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300021474\|Ga0210390_11600248	Not Available	513	Open in IMG/M
3300025898\|Ga0207692_10210189	Not Available	1149	Open in IMG/M
3300025916\|Ga0207663_11396021	Not Available	564	Open in IMG/M
3300027076\|Ga0208860_1038634	Not Available	512	Open in IMG/M
3300027875\|Ga0209283_10315956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	1029	Open in IMG/M
3300028885\|Ga0307304_10570117	Not Available	523	Open in IMG/M
3300028906\|Ga0308309_10888741	Not Available	773	Open in IMG/M
3300031231\|Ga0170824_125460834	Not Available	541	Open in IMG/M
3300031544\|Ga0318534_10633400	Not Available	606	Open in IMG/M
3300031549\|Ga0318571_10181489	Not Available	743	Open in IMG/M
3300031679\|Ga0318561_10200717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300031681\|Ga0318572_10946318	Not Available	512	Open in IMG/M
3300031682\|Ga0318560_10524197	Not Available	642	Open in IMG/M
3300031747\|Ga0318502_10332199	Not Available	897	Open in IMG/M
3300031748\|Ga0318492_10530467	Not Available	626	Open in IMG/M
3300031751\|Ga0318494_10265458	Not Available	986	Open in IMG/M
3300031764\|Ga0318535_10398700	Not Available	614	Open in IMG/M
3300031765\|Ga0318554_10564248	Not Available	643	Open in IMG/M
3300031781\|Ga0318547_10172254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. P24	1283	Open in IMG/M
3300031792\|Ga0318529_10345810	Not Available	692	Open in IMG/M
3300031805\|Ga0318497_10775327	Not Available	538	Open in IMG/M
3300031831\|Ga0318564_10262992	Not Available	764	Open in IMG/M
3300031845\|Ga0318511_10076206	Not Available	1394	Open in IMG/M
3300031859\|Ga0318527_10311413	Not Available	670	Open in IMG/M
3300031860\|Ga0318495_10148930	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1055	Open in IMG/M
3300031860\|Ga0318495_10270673	Not Available	758	Open in IMG/M
3300031879\|Ga0306919_10879547	Not Available	687	Open in IMG/M
3300031890\|Ga0306925_11663575	Not Available	618	Open in IMG/M
3300031896\|Ga0318551_10116934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1433	Open in IMG/M
3300031897\|Ga0318520_10132861	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300031910\|Ga0306923_11555877	Not Available	689	Open in IMG/M
3300031941\|Ga0310912_10181627	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300031941\|Ga0310912_10337343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1169	Open in IMG/M
3300031941\|Ga0310912_11256822	Not Available	562	Open in IMG/M
3300031942\|Ga0310916_10789275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste	800	Open in IMG/M
3300031945\|Ga0310913_10726147	Not Available	702	Open in IMG/M
3300031946\|Ga0310910_10645017	Not Available	839	Open in IMG/M
3300031947\|Ga0310909_10339758	Not Available	1260	Open in IMG/M
3300031954\|Ga0306926_11796163	Not Available	696	Open in IMG/M
3300032001\|Ga0306922_10787053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	995	Open in IMG/M
3300032001\|Ga0306922_12249794	Not Available	524	Open in IMG/M
3300032008\|Ga0318562_10839905	Not Available	525	Open in IMG/M
3300032039\|Ga0318559_10429390	Not Available	616	Open in IMG/M
3300032042\|Ga0318545_10303634	Not Available	574	Open in IMG/M
3300032043\|Ga0318556_10502078	Not Available	634	Open in IMG/M
3300032052\|Ga0318506_10211348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste	857	Open in IMG/M
3300032052\|Ga0318506_10493267	Not Available	543	Open in IMG/M
3300032055\|Ga0318575_10429609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste	670	Open in IMG/M
3300032063\|Ga0318504_10562038	Not Available	547	Open in IMG/M
3300032067\|Ga0318524_10764706	Not Available	510	Open in IMG/M
3300032068\|Ga0318553_10168887	Not Available	1136	Open in IMG/M
3300032076\|Ga0306924_10922810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	964	Open in IMG/M
3300032076\|Ga0306924_11974589	Not Available	602	Open in IMG/M
3300032205\|Ga0307472_101700327	Not Available	623	Open in IMG/M
3300032261\|Ga0306920_100051085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6008	Open in IMG/M
3300032828\|Ga0335080_10056582	All Organisms → cellular organisms → Bacteria	4341	Open in IMG/M
3300032828\|Ga0335080_10271702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1848	Open in IMG/M
3300033289\|Ga0310914_10069997	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300033290\|Ga0318519_10486259	Not Available	742	Open in IMG/M
3300033290\|Ga0318519_10603583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	1.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.14%
Plants	Host-Associated → Plants	1.90%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.14%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00535660	2166559006	Grass Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISNKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRGVVTAFVMLADIELGSLQTAPGGGGRGPWVRVTLP
JGI12269J14319_101983922	3300001356	Peatlands Soil	RHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
JGI12053J15887_102446462	3300001661	Forest Soil	IDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0066684_109188691	3300005179	Soil	TGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVADSEGESVQRLEETVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEAGSVQTAPGGGGSGPWVRVTLP*
Ga0066388_1019263862	3300005332	Tropical Forest Soil	DVTEERPWGAHTNHYISDKFETVANSAGESVQRLEEAVAALGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP*
Ga0066388_1022284792	3300005332	Tropical Forest Soil	GNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDGSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVSLP*
Ga0070709_106171612	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DDVTEERPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMKRARFLVQSPGFVPRSPDHSTVTAFVMLADIEAGSVQTAPGGGVRRPWVRVTVP*
Ga0070711_1001100874	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HRSGGNGFVVVTPTGVRVAETSAAIDDVTGERPWGAHTNHYVSGKFQTVADADSERESVQRLAEAEAMVGGVSDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADVQAGSVQTAPGGGGSGPWTRVTLP*
Ga0070706_1001448945	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVASLSGVSDRELLERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0070763_109675501	3300005610	Soil	ETSAAIDDVTEERPWGAHTNHYLSDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADVELGSVQTAPGGGGRGPWVRVTLP*
Ga0070716_1011956622	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AAIADVTGERPWGAHTNHYVSGKFQAVAGRDSEGESAQRLAEAAAALGGVSDRELRERARLLVQSPGFVPRSPDGSVVTAFVMLADTGTGSVHTAPGGGGTGPWLTVTLP*
Ga0079222_113654282	3300006755	Agricultural Soil	PTGVRIAETSAAIGDVTGEQPWGAHTNHYISGKFQAVAGRDSEGESAQRLAEAAAALGGVSDRELRERARLLVQSPGFVPRSPDGSVVTVFVMLADAETGSVHTAPGGGGPGPWLTVNLP
Ga0079220_100286934	3300006806	Agricultural Soil	MVSRSALCAVSAAEAVGEATRYHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMKRARFLVQSPGFVPRSPDHNTVTAFVMLADIEAGSVQTAPGGGVRRPWVRVTVP*
Ga0099791_103449382	3300007255	Vadose Zone Soil	MVSRSARCALSAAGAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHANHYISGKFHTVANSAAESVQRLEEAVATLSGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIKAGSVQTAPGGGGRGPWVRVTLP*
Ga0099793_105020811	3300007258	Vadose Zone Soil	AVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARLLVQSSGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0066709_1025520841	3300009137	Grasslands Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIGAGSVQTAPGVGGSGPWVRVTLP*
Ga0126374_100507052	3300009792	Tropical Forest Soil	RHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVAKSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGERGPWVRVTLP*
Ga0126380_100423131	3300010043	Tropical Forest Soil	MVSRSALCALSAAEAVRGATRHHRSGGNGFVIVTPTGVRVVETSAAIDDVAGERPWGAHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDGSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVSLP*
Ga0126380_104477901	3300010043	Tropical Forest Soil	SAAIDDVTEERPWGAHTNHYISNKFQTVAKSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIKVGSLQTAPAGGGRGPWVRVTLP*
Ga0126384_102278112	3300010046	Tropical Forest Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVAKSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGERGPWVRVTLP*
Ga0126373_105746242	3300010048	Tropical Forest Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISTKFETVATRAAESVQRLEEAAATLRGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWVRVSLP*
Ga0126373_114254561	3300010048	Tropical Forest Soil	HHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARFLVQSPGFVPRSPDRSVVTAFVMLADIESGSVQTASGQGRRGPWARVTLP*
Ga0126377_126774741	3300010362	Tropical Forest Soil	FVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDGSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVSLP*
Ga0126379_114671251	3300010366	Tropical Forest Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQMVANSAGESVQRLEEAVATLGGVSDRELVERARFLVQSPGFVPRSPDCSEVTVFVMLADIEVGSVQIAPGGGGRGPWVRVTLP*
Ga0134121_101895911	3300010401	Terrestrial Soil	VETSAAIDDVAEERPWAAHTNHYISNKFQTVANSESEGESVQRLEEAVETLGGVSDRELMERARFLVQSPGFVPRSPDHSTVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP*
Ga0126350_110724051	3300010880	Boreal Forest Soil	TRHHRSGGNGFVIATSTCVQVVETSAAIDDVTAERPWAAHTNHYISDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLAGIELGSVQTAPGGGGRGPWVHVTLP*
Ga0137392_102561703	3300011269	Vadose Zone Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0137381_111245972	3300012207	Vadose Zone Soil	SAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP*
Ga0137381_111653471	3300012207	Vadose Zone Soil	GVQVVETSAAIDDVTEERAWGAHTNHYISNKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0137390_104279881	3300012363	Vadose Zone Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTSTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP*
Ga0157374_108516331	3300013296	Miscanthus Rhizosphere	EATRYHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMKRARFLVQSPGFVPRSPDHSTVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP*
Ga0182024_101446146	3300014501	Permafrost	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTGERPWGAHTNHYISDKFQTVANSAGESAQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVILL*
Ga0132258_104883925	3300015371	Arabidopsis Rhizosphere	TSAAIDDVTEERPWGAHTNHYISDKFQTVANSESEGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDHSTVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP*
Ga0182036_113001951	3300016270	Soil	ATGYHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQIAPGGGGRGPWVRVTLP
Ga0182041_110150312	3300016294	Soil	AMVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSATIDDVTEERPWGAHTNHYISTKFQTVADSAGESVQRLEEAVAMLGGVSDRELMERARFLVQSPGFVPRDPDNSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0182033_103887141	3300016319	Soil	RSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPPSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARVTLP
Ga0182033_106149011	3300016319	Soil	RAMVSRNALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERAWFIVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0182033_111722781	3300016319	Soil	TGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP
Ga0182040_105580862	3300016387	Soil	REATRHHRSGGNGFVIVTPTGVQVVETSAAFDDVTEERPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0187806_10176502	3300017928	Freshwater Sediment	VQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGSGRGPWVHVTLP
Ga0187777_101480824	3300017974	Tropical Peatland	GFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVASSEGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGKGPWVRVTLP
Ga0187765_101244521	3300018060	Tropical Peatland	AWSAAEAVREATRHHRSGGNGFVIATPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVADSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPHGPDRSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVALP
Ga0193726_11238392	3300020021	Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIGDVTEERPWAAHTNHYTSDKFQTVATSEGESVQRLEETVAALGGVSDRELMERARFLVQGPGFVPRSPDRSVVTAFVMLADIEAGSVQTAPGGGGRGPWARVTLP
Ga0210397_105332382	3300021403	Soil	VQVVETAAAIDDVTEERPWGAHTNHYISGKFQTVANSDGESVQRLEEAVAMLGGVSDRELMEQARLLLQSPGFVPPSSDHSVVTAFVMLADIEAGSVQTAPGGGGTGPWVSVTLP
Ga0210390_116002481	3300021474	Soil	LSAAEAVREAAHHCSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELVERARFLIQSPGFIPRSPDRSVVTAFVMLADIEAGSVQTAPGGGGRGPWVHVTLP
Ga0207692_102101892	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MCGSGPACDGQQKRTVRLLGRRAVRETTRHHRSGGNGFVVVTPTGVRVAETSAAIDDVTGERPWGAHTNHYVSGKFQTVADADSERESVQRLAEAEAMVGGVSDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADVQAGSVQTAPGGGGSGPWTRVTLP
Ga0207663_113960211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VQSASARDVRVGSGVRWSAEELSRRTPCALPAAGAVREATRHHRSGGNGFVVVTPTGVRVAETSAAIDDVTGERPWGAHTNHYVSGKFQTVADADSERESVQRLAEAEAMVGGVSDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADVQAGSVQTAPGGGGSGPWTRVTLP
Ga0208860_10386341	3300027076	Forest Soil	TRQHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVHVTLP
Ga0209283_103159561	3300027875	Vadose Zone Soil	RSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISNKFQTVANSAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIEVGSVQTAPGGGGRGPWVRVTLP
Ga0307304_105701171	3300028885	Soil	VREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDRSTVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0308309_108887411	3300028906	Soil	AMVSRSALCALSAAEAVREATRQHRSGGNGFVIVTPAGVQVVETSAAIDDVTEERPWGAHTNHYLSDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVHVTLP
Ga0170824_1254608341	3300031231	Forest Soil	AEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSEGESVQRLEKAMATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADTELGSLQTAPGGGGRGPWVRVTLP
Ga0318534_106334001	3300031544	Soil	VSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISKKFQTVASSAGESVQRLEDVVATLGGVSGRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318571_101814891	3300031549	Soil	ALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPPSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARMTLP
Ga0318561_102007173	3300031679	Soil	VTPTGVQVVETSAVIDDVTGERAWGAHTNHYISAKLQAVANSEGESVQRLEEAVAMLGGVSDRELMERARSLVQSPGFVPRSPDQSVVTAFVMVADIKLGSVQTAPGGGRRGPWARVTLP
Ga0318572_109463181	3300031681	Soil	TGVLVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318560_105241971	3300031682	Soil	VREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISDKFQTVASSAGESVQRLEEVAATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318502_103321991	3300031747	Soil	NGFVLVTPTGVLVVETSAAIDDVTEERPWGAHTNHYISTKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318492_105304671	3300031748	Soil	AVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318494_102654582	3300031751	Soil	REATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISKKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318535_103987001	3300031764	Soil	ETTRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEEQPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDRSVVTAFVMLADTEAGSVQTAPGGGGRDLWVRVTLP
Ga0318554_105642481	3300031765	Soil	IREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP
Ga0318547_101722544	3300031781	Soil	NGFVIVTPTGVQVVETSAVIDDVTGERAWGAHTNHYISAKLQAVANSEGESVQRLEEAVAMLGGVSDRELMERARSLVQSPGFVPRSPDQSVVTAFVMVADIKLGSVQTAPGGGRRGPWARVTLP
Ga0318529_103458101	3300031792	Soil	VVETSAAIDDVTEERPWGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPPSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARMTLP
Ga0318497_107753271	3300031805	Soil	RSGGNGFVIVTPTGVQVVETSAAIDDVTEARPWGAHTNHYISTKFQTVADSPGESVQRLEEAVATVGGVSDSELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVHTAPGGGGRGPWVRVTLP
Ga0318564_102629921	3300031831	Soil	AVREATRHHRSGGNGFVIVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPRSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARVTLP
Ga0310917_100851311	3300031833	Soil	TEERPWGAHTNHYISTKFETVATRAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0318511_100762061	3300031845	Soil	LSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318527_103114131	3300031859	Soil	RSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISKKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318495_101489301	3300031860	Soil	RETTRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEEQPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0318495_102706731	3300031860	Soil	GGNGFVIVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPPSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARMTLP
Ga0306919_108795471	3300031879	Soil	VSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0306925_116635752	3300031890	Soil	GFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISDKFQTVASSAGESVQRLEEVAATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADVEAGSVRTAPGGGGRGPWVRVTLP
Ga0318551_101169343	3300031896	Soil	VQVVETSAAIDDVTEQRPWGAHTNHYISKKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318520_101328611	3300031897	Soil	HRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQIAPGGGGRGPWVRVTLP
Ga0306923_115558772	3300031910	Soil	NGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERAWFIVQSPGFVPRSPDRSVVTAFVMLADIERGSVQTAPGGGGRGPWVRVTLP
Ga0310912_101816271	3300031941	Soil	LSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISKKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0310912_103373432	3300031941	Soil	AAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERAWFIVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0310912_112568221	3300031941	Soil	VQVVETSAAIDDVTEERPWGAHTSHYISAKFQTVANSAAESVQRLEEAVAALGGVSDRELTERARFLVQSPGFVPRSPDRSVVTAFVMLADIEAGSVQTAPGGGGRGPWIRAR
Ga0310916_107892752	3300031942	Soil	AVREATRHHRSGGNGFVLVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISTKFETVATRAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0310913_107261472	3300031945	Soil	GNGFVIVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVGDRELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVQTAPGGGGRGPWVRVTLP
Ga0310910_106450171	3300031946	Soil	AAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0310909_103397582	3300031947	Soil	AIDDVTEARPWGAHTNHYISTKFQTVADSPGESVQRLEEAVATVGGVSDSELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVHTAPGGGGRGPWVRVTLP
Ga0306926_117961632	3300031954	Soil	GFVIVTPTGVQVVETSAAIDDVTEEQPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDRSVVTAFVMLADTEAGSVQTAPGGGGRDLWVRVTLP
Ga0306922_107870531	3300032001	Soil	DVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERARFIVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0306922_122497941	3300032001	Soil	SGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISTKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318562_108399051	3300032008	Soil	AAINDVTEERPWAAHTNHYISDKFHTVANSEEESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIERGSVQTAPGGGGRGPWVRVTLP
Ga0318559_104293901	3300032039	Soil	AVREATRRHRSGGNGFVIVTPTGVQVVETSAAINDVTEERPWAAHTNHYISDKFHTVANSEEESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLADIERGSVQTAPGGGGRGPWVRVTLP
Ga0318545_103036341	3300032042	Soil	IVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTL
Ga0318556_105020782	3300032043	Soil	TPTGVQVVETSAAIDDVTEQRPWGAHTNHYISTKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318506_102113481	3300032052	Soil	GNGFVLVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISTKFETVATRAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0318506_104932671	3300032052	Soil	SAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318575_104296092	3300032055	Soil	TGVQVVETSAAIDDVTEERPWGAHTNHYISTKFETVATRAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0318504_105620381	3300032063	Soil	WSAGEAVREATRHHRSGGNGFVLVTPTGVQVVETSAAIDDVTEERPWGAHTNHYISTKFETVATRAGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSTVTAFVMLADIEAGSVQTAPGGGGRGPWIRVTLP
Ga0318524_107647061	3300032067	Soil	LCALSAAEAVRETTRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEEQPWAAHTNHYISDKFQTVANSEEESVQRLEEAVATLGGVSDRELMERARLLVQSPGFVPRSPDRSVVTAFVILADTEAGSVQTAPGGGGRDLWVRVTLP
Ga0318553_101688872	3300032068	Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0306924_109228101	3300032076	Soil	QVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERARFIVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0306924_119745891	3300032076	Soil	VQVVETSAAIDDVTEARPWGAHTNHYISTKFQTVADSPGESVQRLEEAVATVGGVSDSELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVHTAPGGGGRGPWVRVTLP
Ga0307472_1017003271	3300032205	Hardwood Forest Soil	AWSAAEAVREATRHHRSGGNGFVIVTRTGVQVVETSAAIDDVAEERPWAVHTNHYISDKFQTVANSEGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPNRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP
Ga0306920_1000510857	3300032261	Soil	MVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEARPWGAHTNHYISTKFQTVADSPGESVQRLEEAVATVGGVSDSELMERARFLVQSPGFVPRSPDGSVVTAFVMLADIEAGSVHTAPGGGGRGPWVRVTLP
Ga0335080_100565825	3300032828	Soil	RHHRSGGNGFVIATPTGVQVVETSATIDDVTEQRPWAAHTNHYVSDRFQAVANSEGESAQRLEEAAATIGSVRDRELRERARSLVQSPGFVPRGPDRSVVTAFVMLADVELGSVEIAPGGGGTGLWVRVTLP
Ga0335080_102717021	3300032828	Soil	VGVPRAMVSRSALCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSAAIGDVTEERPWGAHTNHYISDKFQTVANSDGESVQRLEEAVATLGGVSDRELMERARFLVQSPGFVPRSPDRSVVTAFVMLASIEAGSVQTAPGGGGRGPWVRVTLP
Ga0310914_100699971	3300033289	Soil	LCALSAAEAVREATRHHRSGGNGFVIVTPTGVQVVETSATIDDVTEERPGGAHTNHYISTKFQTVANSAGESVQRLEEAVATLGGVSDRELRERARSLVQSPGFVPPSPDRSVVTAFVMLADIESGSVQTAPGQGRRGPWARVTLP
Ga0318519_104862591	3300033290	Soil	TSAAIDDVTEQRPWGAHTNHYISRKFQTVASSAGESVQRLEDVVATLGGVSDRELRERARFLVQSPGFVPRGPDRSVVTAFVMLADIEAGSVRTAPGGGGKGPWVRVTLP
Ga0318519_106035831	3300033290	Soil	NALCALSAAEAIREATRHHRSGGNGFVIVTPTGVQVVETSAAIDDVTEERPWAAHTNHYISDKFQTVANSAGESVQRLEEAVATLGGVSDGELMERAWFIVQSPGFVPRSPDRSVVTAFVMLADIELGSVQTAPGGGGRGPWVRVTLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences