NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095930

Metagenome Family F095930

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095930
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 113 residues
Representative Sequence VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Number of Associated Samples 79
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 37.14 %
% of genes near scaffold ends (potentially truncated) 40.95 %
% of genes from short scaffolds (< 2000 bps) 74.29 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(36.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.762 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 49.30%    Coil/Unstructured: 50.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.3.4.1: Transthyretin (synonym: prealbumin)d1f86a_1f860.67326
b.3.4.0: automated matchesd3qvaa13qva0.67029
b.3.4.0: automated matchesd2h6ua_2h6u0.66542
b.183.1.1: Perfringolysin C-terminal-liked1pfoa21pfo0.66429
b.3.4.0: automated matchesd4q14a_4q140.66021

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02410RsfS 40.00
PF00158Sigma54_activat 34.29
PF01467CTP_transf_like 5.71
PF02590SPOUT_MTase 3.81
PF02954HTH_8 3.81
PF00149Metallophos 1.90
PF02572CobA_CobO_BtuR 0.95
PF03626COX4_pro 0.95
PF02899Phage_int_SAM_1 0.95
PF03713DUF305 0.95
PF00753Lactamase_B 0.95
PF01039Carboxyl_trans 0.95
PF01016Ribosomal_L27 0.95
PF01926MMR_HSR1 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0799Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunitsTranslation, ribosomal structure and biogenesis [J] 40.00
COG157623S rRNA pseudoU1915 N3-methylase RlmHTranslation, ribosomal structure and biogenesis [J] 3.81
COG0211Ribosomal protein L27Translation, ribosomal structure and biogenesis [J] 0.95
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.95
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.95
COG2109ATP:corrinoid adenosyltransferaseCoenzyme transport and metabolism [H] 0.95
COG3125Heme/copper-type cytochrome/quinol oxidase, subunit 4Energy production and conversion [C] 0.95
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 0.95
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.95
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.95
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17103348All Organisms → cellular organisms → Bacteria → Acidobacteria1394Open in IMG/M
2228664022|INPgaii200_c1180332All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101988895All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300000559|F14TC_107582467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300004114|Ga0062593_100000318All Organisms → cellular organisms → Bacteria14505Open in IMG/M
3300004479|Ga0062595_100036370All Organisms → cellular organisms → Bacteria → Acidobacteria2096Open in IMG/M
3300004479|Ga0062595_100203369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1228Open in IMG/M
3300004479|Ga0062595_102271654All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300004633|Ga0066395_10532359All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300005330|Ga0070690_100461176All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300005332|Ga0066388_100213886All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2554Open in IMG/M
3300005332|Ga0066388_102453009All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300005343|Ga0070687_100220519All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300005356|Ga0070674_100280742All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300005367|Ga0070667_102239454All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005439|Ga0070711_100304814All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1268Open in IMG/M
3300005440|Ga0070705_100023101All Organisms → cellular organisms → Bacteria3334Open in IMG/M
3300005466|Ga0070685_10770470All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005468|Ga0070707_101592135All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005545|Ga0070695_101227220All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005548|Ga0070665_100005944All Organisms → cellular organisms → Bacteria12497Open in IMG/M
3300005764|Ga0066903_100186897All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter3069Open in IMG/M
3300005764|Ga0066903_103467501All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005764|Ga0066903_104869905All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005842|Ga0068858_100648499All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300005842|Ga0068858_100669441All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300006173|Ga0070716_100816862All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300006175|Ga0070712_100030427All Organisms → cellular organisms → Bacteria3627Open in IMG/M
3300006854|Ga0075425_100001809All Organisms → cellular organisms → Bacteria21062Open in IMG/M
3300006854|Ga0075425_100419722All Organisms → cellular organisms → Bacteria1541Open in IMG/M
3300006854|Ga0075425_100442030All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300006854|Ga0075425_100555395All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300006854|Ga0075425_102420930All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300006871|Ga0075434_101085415All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300007076|Ga0075435_100679778All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300007076|Ga0075435_101246548All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300009162|Ga0075423_11450574All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300009174|Ga0105241_11392980All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300009177|Ga0105248_10053560All Organisms → cellular organisms → Bacteria → Acidobacteria4527Open in IMG/M
3300009545|Ga0105237_10148156All Organisms → cellular organisms → Bacteria → Acidobacteria2342Open in IMG/M
3300009792|Ga0126374_10058310All Organisms → cellular organisms → Bacteria → Acidobacteria2002Open in IMG/M
3300009792|Ga0126374_10111892All Organisms → cellular organisms → Bacteria1576Open in IMG/M
3300009792|Ga0126374_10222253All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300010043|Ga0126380_10585510All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300010046|Ga0126384_10118687All Organisms → cellular organisms → Bacteria → Acidobacteria1985Open in IMG/M
3300010047|Ga0126382_10480722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium993Open in IMG/M
3300010048|Ga0126373_10071464All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes3136Open in IMG/M
3300010358|Ga0126370_10288738All Organisms → cellular organisms → Bacteria → Acidobacteria1294Open in IMG/M
3300010358|Ga0126370_10335167All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300010358|Ga0126370_11321049All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300010360|Ga0126372_10109094All Organisms → cellular organisms → Bacteria2105Open in IMG/M
3300010360|Ga0126372_12722165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300010362|Ga0126377_12337888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300010366|Ga0126379_10031203All Organisms → cellular organisms → Bacteria4164Open in IMG/M
3300010366|Ga0126379_11927643All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300010398|Ga0126383_10453403All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1332Open in IMG/M
3300012896|Ga0157303_10128936All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300012948|Ga0126375_10084321All Organisms → cellular organisms → Bacteria → Acidobacteria1829Open in IMG/M
3300012948|Ga0126375_11148652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300012971|Ga0126369_10629664All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1145Open in IMG/M
3300012971|Ga0126369_10789361All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin3451031Open in IMG/M
3300013297|Ga0157378_10004763All Organisms → cellular organisms → Bacteria → Acidobacteria11892Open in IMG/M
3300013297|Ga0157378_11204569All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300014968|Ga0157379_10168033All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1980Open in IMG/M
3300014969|Ga0157376_10000005All Organisms → cellular organisms → Bacteria → Acidobacteria443695Open in IMG/M
3300015371|Ga0132258_10017196All Organisms → cellular organisms → Bacteria → Acidobacteria15605Open in IMG/M
3300015371|Ga0132258_10204836All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4788Open in IMG/M
3300015371|Ga0132258_10637703All Organisms → cellular organisms → Bacteria2678Open in IMG/M
3300015371|Ga0132258_13222183All Organisms → cellular organisms → Bacteria → Acidobacteria1125Open in IMG/M
3300015372|Ga0132256_100498073All Organisms → cellular organisms → Bacteria → Acidobacteria1329Open in IMG/M
3300015372|Ga0132256_103274995All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300015373|Ga0132257_100541141All Organisms → cellular organisms → Bacteria → Acidobacteria1433Open in IMG/M
3300015374|Ga0132255_102274458All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300016341|Ga0182035_10072398All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2431Open in IMG/M
3300021560|Ga0126371_10824383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1073Open in IMG/M
3300024222|Ga0247691_1018240All Organisms → cellular organisms → Bacteria → Acidobacteria1109Open in IMG/M
3300024232|Ga0247664_1102016All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300024254|Ga0247661_1000420All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium7602Open in IMG/M
3300024310|Ga0247681_1007766All Organisms → cellular organisms → Bacteria → Acidobacteria1411Open in IMG/M
3300025899|Ga0207642_10432305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300025900|Ga0207710_10169294All Organisms → cellular organisms → Bacteria → Acidobacteria1067Open in IMG/M
3300025937|Ga0207669_10939062All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300025938|Ga0207704_10698797All Organisms → cellular organisms → Bacteria → Acidobacteria839Open in IMG/M
3300025941|Ga0207711_11764542All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300026035|Ga0207703_10473654All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300026088|Ga0207641_10102903All Organisms → cellular organisms → Bacteria2519Open in IMG/M
3300026089|Ga0207648_10667183All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium962Open in IMG/M
3300026095|Ga0207676_10526288All Organisms → cellular organisms → Bacteria → Acidobacteria1126Open in IMG/M
3300027874|Ga0209465_10010270All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4156Open in IMG/M
3300031546|Ga0318538_10288470All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes884Open in IMG/M
3300031561|Ga0318528_10085260All Organisms → cellular organisms → Bacteria → Acidobacteria1643Open in IMG/M
3300031668|Ga0318542_10348316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300031679|Ga0318561_10288177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium897Open in IMG/M
3300031720|Ga0307469_10032561All Organisms → cellular organisms → Bacteria → Acidobacteria3049Open in IMG/M
3300031720|Ga0307469_10980289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300031798|Ga0318523_10374014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300031846|Ga0318512_10407574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300031860|Ga0318495_10165317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium998Open in IMG/M
3300031896|Ga0318551_10224015All Organisms → cellular organisms → Bacteria → Acidobacteria1046Open in IMG/M
3300032068|Ga0318553_10271726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium886Open in IMG/M
3300032094|Ga0318540_10301921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300032174|Ga0307470_10007249All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4429Open in IMG/M
3300032180|Ga0307471_100049185All Organisms → cellular organisms → Bacteria → Acidobacteria3462Open in IMG/M
3300032205|Ga0307472_100081121All Organisms → cellular organisms → Bacteria → Acidobacteria2159Open in IMG/M
3300032205|Ga0307472_100282774All Organisms → cellular organisms → Bacteria → Acidobacteria1322Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024310Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_003074602088090014SoilVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
INPgaii200_118033222228664022SoilVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
INPhiseqgaiiFebDRAFT_10198889533300000364SoilVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
F14TC_10758246723300000559SoilVSASEHPPATPARVTIFRNSPEDTQTRQIKIYLDQQNQGELMYGESMTLDVSAGTHTIRVDNTWNRKELAIEVQPGDELQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSGPPHR*
Ga0062593_10000031823300004114SoilVADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS*
Ga0062595_10003637033300004479SoilVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS
Ga0062595_10020336923300004479SoilVIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0062595_10227165423300004479SoilVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMR
Ga0066395_1053235913300004633Tropical Forest SoilDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0070690_10046117623300005330Switchgrass RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0066388_10021388623300005332Tropical Forest SoilVSASENPSPATARVTIFRDSPEDTQTRQIKVYLDGQQQGELMYGDAMTLDLMPGVHVLRVDNTWNRKDLSIAVRPGEDLQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPRS*
Ga0066388_10245300913300005332Tropical Forest SoilARFGRSLLSGCAVPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0070687_10022051923300005343Switchgrass RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0070674_10028074233300005356Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0070667_10223945423300005367Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070711_10030481423300005439Corn, Switchgrass And Miscanthus RhizosphereVQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070705_10002310143300005440Corn, Switchgrass And Miscanthus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070685_1077047013300005466Switchgrass RhizosphereFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0070707_10159213513300005468Corn, Switchgrass And Miscanthus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSR
Ga0070695_10122722023300005545Corn, Switchgrass And Miscanthus RhizosphereHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070665_10000594443300005548Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0066903_10018689743300005764Tropical Forest SoilMPSFRVIAAACVLPAIIPERAAVSASENSSPATARVTIFRDSPEDTQTRQIKIYLDGQQQGELMYGDSMTLDVVPGAHVLRVDNTWNRKDLAIAVRPGEDFQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLRS*
Ga0066903_10346750113300005764Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0066903_10486990523300005764Tropical Forest SoilVPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0068858_10064849923300005842Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0068858_10066944123300005842Switchgrass RhizosphereMSTTLPSPKSSDSTSVGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS*
Ga0070716_10081686213300006173Corn, Switchgrass And Miscanthus RhizosphereVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070712_10003042753300006175Corn, Switchgrass And Miscanthus RhizosphereVPPPGHSGSATVQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_100001809133300006854Populus RhizosphereVSLPEHPAAHITVVRNSPDDTQTRQIKIFLDGENHGELMFGDSATLGVNAGSHTIRVDNTWNRKEISFQIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS*
Ga0075425_10041972213300006854Populus RhizosphereMPPPEHSGSTTAQITIVRNSPEDTQTRQIKIFLDGESQGELMFGDSMTLDVGAGAHTLRVDNTWNRKDLAIEISAGENLRFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_10044203033300006854Populus RhizosphereMTASAVPHRDHFGSATAQIVIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0075425_10055539523300006854Populus RhizosphereVPPPENSGSATARITIVRNSPEDTQTRQIKIFLDGENQGELMFGDSMTLNVSAGTHAIRVDNTWNRKELTLEIHAGGSLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_10242093013300006854Populus RhizosphereVSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEPLPSRPPEP*
Ga0075434_10108541523300006871Populus RhizosphereVSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEP
Ga0075435_10067977823300007076Populus RhizosphereVADSENFKPGTAHITVFRNSPEDTQTRQIKIYLDRQNQGELMYGDSMTLDVAAGTHVLGVDNTWNRKELAIEVQHGDELQFITRSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPQR*
Ga0075435_10124654813300007076Populus RhizosphereRLRRSSAPARFRRSLLIANHVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075423_1145057423300009162Populus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQSGEHLYFLAKSSAGKFAWFLLGFLGAGPMQVSI
Ga0105241_1139298013300009174Corn RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0105248_1005356013300009177Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPS
Ga0105237_1014815623300009545Corn RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRADEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0126374_1005831033300009792Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHILRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0126374_1011189223300009792Tropical Forest SoilVSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPIHVSIEPLPSRPPQP*
Ga0126374_1022225323300009792Tropical Forest SoilVPITIVRNSPDDTQTRQIKIFLDGESQGELMFGDSMTLEVSVGAHTIGVDNTWKRKDLAIEIHAGEHLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0126380_1058551023300010043Tropical Forest SoilVSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMFGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126384_1011868733300010046Tropical Forest SoilVSDLQDSGLARGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNYKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126382_1048072213300010047Tropical Forest SoilGRSLLSSTAVSDPKSSGFAAGRVTILRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126373_1007146423300010048Tropical Forest SoilMPSEKPKDPTAGGQVTIVRNSSDDTQTRQIVIYLDRERKGELMFGDSMTFELTPGAHTLRVDNTWNRQDLSFELRAGDHLQFQTKSTASKFSWFLLGFLGAGPMHVFIEPLPSRT*
Ga0126370_1028873823300010358Tropical Forest SoilVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126370_1033516733300010358Tropical Forest SoilVSDLQDSGLARGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126370_1132104923300010358Tropical Forest SoilFMTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA*
Ga0126372_1010909413300010360Tropical Forest SoilPADTQTRQIKVYLDGRNQGELMYGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126372_1272216513300010360Tropical Forest SoilMTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA*
Ga0126377_1233788813300010362Tropical Forest SoilSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126379_1003120333300010366Tropical Forest SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126379_1192764323300010366Tropical Forest SoilVSFAENTSSANAQITVVRNSADDTQTRQIKVFLDGENQGELMFGDSMTLDVVAGKHTIRVDNTWNRQTLTTEVHSGEHLEFVTKSTAGKFVWFLLGFLGAGPMQVSIEPLPSRSQRQ*
Ga0126383_1045340313300010398Tropical Forest SoilGRSLLSGTAVSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLEFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0157303_1012893613300012896SoilVADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLP
Ga0126375_1008432133300012948Tropical Forest SoilVSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126375_1114865223300012948Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIRLDVSPGTHVLRVDNTWNRKDLKIEIRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHSP*
Ga0126369_1062966413300012971Tropical Forest SoilPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0126369_1078936113300012971Tropical Forest SoilMSSAERLETTARITILRNATDDTQTRQIKVYLDGQNRGELMYGDSLALDVPPGAHVLGVDNTWNRKDLALEVHPGRDLRFLTKSSAGRFVWFLLGF
Ga0157378_1000476373300013297Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0157378_1120456933300013297Miscanthus RhizosphereVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGA
Ga0157379_1016803333300014968Switchgrass RhizosphereVGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS*
Ga0157376_10000005543300014969Miscanthus RhizosphereVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132258_1001719663300015371Arabidopsis RhizosphereVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS*
Ga0132258_1020483683300015371Arabidopsis RhizosphereVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRREPS
Ga0132258_1063770333300015371Arabidopsis RhizosphereVLPATIPDPSAVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWKRKELAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132258_1322218313300015371Arabidopsis RhizosphereSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132256_10049807323300015372Arabidopsis RhizosphereVPTTEHSASPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132256_10327499523300015372Arabidopsis RhizosphereVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGA
Ga0132257_10054114123300015373Arabidopsis RhizosphereVPTTEHSGSPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132255_10227445823300015374Arabidopsis RhizospherePSDHPVPVTAQITLVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0182035_1007239853300016341SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSI
Ga0126371_1082438313300021560Tropical Forest SoilAGRGGLERPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP
Ga0247691_101824033300024222SoilVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLG
Ga0247664_110201623300024232SoilVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0247661_100042093300024254SoilVPLPEHRAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS
Ga0247681_100776613300024310SoilVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS
Ga0207642_1043230523300025899Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR
Ga0207710_1016929433300025900Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS
Ga0207669_1093906213300025937Miscanthus RhizosphereAAVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR
Ga0207704_1069879713300025938Miscanthus RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRV
Ga0207711_1176454213300025941Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFL
Ga0207703_1047365433300026035Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0207641_1010290343300026088Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGVHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS
Ga0207648_1066718323300026089Miscanthus RhizosphereVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS
Ga0207676_1052628813300026095Switchgrass RhizosphereRSLLTAVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0209465_1001027073300027874Tropical Forest SoilRPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP
Ga0318538_1028847023300031546SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318528_1008526023300031561SoilVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318542_1034831613300031668SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMH
Ga0318561_1028817723300031679SoilATYRAMKFPTSRTPSFPAIAGACALRAITPERHRVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0307469_1003256133300031720Hardwood Forest SoilVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLRIEVRAGEHLQFMTKSSAGKFVWFLLGFLGAGPIRVSIEPLPSRSEHR
Ga0307469_1098028923300031720Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Ga0318523_1037401413300031798SoilSLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318512_1040757413300031846SoilRSLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318495_1016531713300031860SoilTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318551_1022401533300031896SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPP
Ga0318553_1027172623300032068SoilDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318540_1030192123300032094SoilNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0307470_1000724953300032174Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0307471_10004918543300032180Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0307472_10008112123300032205Hardwood Forest SoilVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Ga0307472_10028277413300032205Hardwood Forest SoilVPTTEHSGSPTAQITIVRDSPDDTQTRQIKVFLDGENQGDLMFGDFMTLDVNVGSHTIRVDNTWNHKDLIIEIHAGERLQFLTKSSAGKFAWFL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.