Metagenome / Metatranscriptome Family F095953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	62 residues
Representative Sequence	MDRASHYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Number of Associated Samples	81
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.86 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.619 % of family members)
Environment Ontology (ENVO)	Unclassified (47.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.65% β-sheet: 0.00% Coil/Unstructured: 45.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d4iwka_	4iwk	0.9338
a.25.1.1: Ferritin	d6txia_	6txi	0.92198
a.25.1.0: automated matches	d7o6ea_	7o6e	0.91801
a.25.1.0: automated matches	d6sooa_	6soo	0.91664
a.25.1.1: Ferritin	d1z6om1	1z6o	0.90717

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12840	HTH_20	5.71
PF00239	Resolvase	1.90
PF13191	AAA_16	0.95
PF08240	ADH_N	0.95
PF13091	PLDc_2	0.95
PF00873	ACR_tran	0.95
PF04828	GFA	0.95
PF08327	AHSA1	0.95
PF00571	CBS	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.90
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.90
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
All Organisms	root	All Organisms	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
cellular organisms	root	All Organisms → cellular organisms	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples	0.95 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.95 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
Sphingomonas sp. 28-63-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. 28-63-12	0.95 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005434\|Ga0070709_10254508	Not Available	1266	Open in IMG/M
3300005437\|Ga0070710_10057479	All Organisms → cellular organisms → Bacteria → Proteobacteria	2205	Open in IMG/M
3300005445\|Ga0070708_100822331	Not Available	873	Open in IMG/M
3300005457\|Ga0070662_100922535	Not Available	746	Open in IMG/M
3300005598\|Ga0066706_10571459	Not Available	898	Open in IMG/M
3300005764\|Ga0066903_102401788	Not Available	1019	Open in IMG/M
3300006173\|Ga0070716_100418288	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300006175\|Ga0070712_100155899	Not Available	1758	Open in IMG/M
3300006175\|Ga0070712_102005154	Not Available	507	Open in IMG/M
3300006871\|Ga0075434_101055817	Not Available	826	Open in IMG/M
3300009012\|Ga0066710_102468397	Not Available	752	Open in IMG/M
3300009038\|Ga0099829_10132429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1975	Open in IMG/M
3300009089\|Ga0099828_10644418	Not Available	953	Open in IMG/M
3300009089\|Ga0099828_10677712	Not Available	926	Open in IMG/M
3300009094\|Ga0111539_13186067	Not Available	529	Open in IMG/M
3300009143\|Ga0099792_10196182	Not Available	1145	Open in IMG/M
3300010048\|Ga0126373_11569628	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010154\|Ga0127503_10317719	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_11103546	Not Available	894	Open in IMG/M
3300010373\|Ga0134128_11702687	Not Available	694	Open in IMG/M
3300010376\|Ga0126381_103453526	Not Available	621	Open in IMG/M
3300010398\|Ga0126383_11226594	Not Available	840	Open in IMG/M
3300011269\|Ga0137392_11616386	Not Available	506	Open in IMG/M
3300011270\|Ga0137391_10271823	Not Available	1466	Open in IMG/M
3300012202\|Ga0137363_10681766	Not Available	869	Open in IMG/M
3300012205\|Ga0137362_10795592	Not Available	810	Open in IMG/M
3300012205\|Ga0137362_11259054	Not Available	625	Open in IMG/M
3300012205\|Ga0137362_11512203	Not Available	558	Open in IMG/M
3300012211\|Ga0137377_10131576	All Organisms → cellular organisms → Bacteria → Proteobacteria	2390	Open in IMG/M
3300012362\|Ga0137361_11793139	Not Available	532	Open in IMG/M
3300012917\|Ga0137395_11048715	Not Available	581	Open in IMG/M
3300012923\|Ga0137359_11327684	Not Available	607	Open in IMG/M
3300016270\|Ga0182036_10440987	Not Available	1022	Open in IMG/M
3300016319\|Ga0182033_10409256	Not Available	1148	Open in IMG/M
3300016319\|Ga0182033_10409370	Not Available	1148	Open in IMG/M
3300016371\|Ga0182034_10011535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4978	Open in IMG/M
3300016371\|Ga0182034_10576229	Not Available	947	Open in IMG/M
3300016404\|Ga0182037_11214481	Not Available	663	Open in IMG/M
3300018433\|Ga0066667_11555526	Not Available	587	Open in IMG/M
3300020580\|Ga0210403_10414487	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300020580\|Ga0210403_10536048	Not Available	949	Open in IMG/M
3300020580\|Ga0210403_10696287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	814	Open in IMG/M
3300021171\|Ga0210405_11438188	Not Available	501	Open in IMG/M
3300021405\|Ga0210387_11485655	Not Available	580	Open in IMG/M
3300021478\|Ga0210402_10845238	Not Available	841	Open in IMG/M
3300027862\|Ga0209701_10419650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300030967\|Ga0075399_10810325	Not Available	524	Open in IMG/M
3300031057\|Ga0170834_110127667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. 28-63-12	1526	Open in IMG/M
3300031128\|Ga0170823_13803183	Not Available	719	Open in IMG/M
3300031231\|Ga0170824_116197132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300031231\|Ga0170824_117349243	Not Available	830	Open in IMG/M
3300031446\|Ga0170820_10580260	Not Available	504	Open in IMG/M
3300031446\|Ga0170820_15174670	Not Available	868	Open in IMG/M
3300031469\|Ga0170819_15992192	Not Available	509	Open in IMG/M
3300031474\|Ga0170818_104154218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	972	Open in IMG/M
3300031474\|Ga0170818_106812128	Not Available	658	Open in IMG/M
3300031474\|Ga0170818_110667262	Not Available	1173	Open in IMG/M
3300031543\|Ga0318516_10032508	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300031543\|Ga0318516_10048259	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300031543\|Ga0318516_10054654	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300031545\|Ga0318541_10014663	All Organisms → cellular organisms → Bacteria → Proteobacteria	3618	Open in IMG/M
3300031545\|Ga0318541_10018871	Not Available	3268	Open in IMG/M
3300031545\|Ga0318541_10028767	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300031549\|Ga0318571_10158952	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031564\|Ga0318573_10014604	All Organisms → cellular organisms → Bacteria	3416	Open in IMG/M
3300031564\|Ga0318573_10190796	Not Available	1085	Open in IMG/M
3300031572\|Ga0318515_10550532	Not Available	615	Open in IMG/M
3300031573\|Ga0310915_10012700	All Organisms → cellular organisms → Bacteria	4941	Open in IMG/M
3300031573\|Ga0310915_10044760	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300031640\|Ga0318555_10234016	Not Available	992	Open in IMG/M
3300031640\|Ga0318555_10353500	Not Available	796	Open in IMG/M
3300031679\|Ga0318561_10509460	Not Available	663	Open in IMG/M
3300031682\|Ga0318560_10025518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2750	Open in IMG/M
3300031718\|Ga0307474_11463633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300031748\|Ga0318492_10630786	Not Available	573	Open in IMG/M
3300031751\|Ga0318494_10217308	Not Available	1092	Open in IMG/M
3300031751\|Ga0318494_10674414	Not Available	605	Open in IMG/M
3300031753\|Ga0307477_10103356	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300031753\|Ga0307477_10107153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1945	Open in IMG/M
3300031777\|Ga0318543_10069316	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300031781\|Ga0318547_10176439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300031795\|Ga0318557_10175424	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031798\|Ga0318523_10115498	All Organisms → cellular organisms → Bacteria → Proteobacteria	1324	Open in IMG/M
3300031821\|Ga0318567_10854847	Not Available	515	Open in IMG/M
3300031821\|Ga0318567_10899293	Not Available	501	Open in IMG/M
3300031833\|Ga0310917_10067001	Not Available	2242	Open in IMG/M
3300031835\|Ga0318517_10198216	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031845\|Ga0318511_10301776	Not Available	724	Open in IMG/M
3300031859\|Ga0318527_10340598	Not Available	639	Open in IMG/M
3300031860\|Ga0318495_10205288	Not Available	887	Open in IMG/M
3300031880\|Ga0318544_10208753	Not Available	754	Open in IMG/M
3300031880\|Ga0318544_10219620	Not Available	734	Open in IMG/M
3300031890\|Ga0306925_11459977	Not Available	671	Open in IMG/M
3300031893\|Ga0318536_10633183	Not Available	534	Open in IMG/M
3300031896\|Ga0318551_10107419	Not Available	1491	Open in IMG/M
3300031896\|Ga0318551_10390970	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300031946\|Ga0310910_10570011	Not Available	898	Open in IMG/M
3300031981\|Ga0318531_10011973	All Organisms → cellular organisms → Bacteria	3283	Open in IMG/M
3300032035\|Ga0310911_10397805	Not Available	797	Open in IMG/M
3300032041\|Ga0318549_10037352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300032051\|Ga0318532_10295144	Not Available	575	Open in IMG/M
3300032060\|Ga0318505_10297948	Not Available	761	Open in IMG/M
3300032089\|Ga0318525_10726335	Not Available	505	Open in IMG/M
3300032090\|Ga0318518_10620514	Not Available	551	Open in IMG/M
3300032205\|Ga0307472_101384959	Not Available	681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.19%
Plants	Host-Associated → Plants	2.86%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.52%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070709_102545083	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	REQADHAWRLADATWQDDLQEMLRRLARDFDEAADNVEAGATEVRHPEPRS*
Ga0070710_100574792	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGHASHFREQADHAWRLADATWQDDLQEMLRRLARDFDEAADNVEAGATEVRHPEPRS*
Ga0070708_1008223312	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MITAPRCFEFMDRASYYHHQADHARQLAEATWQPDLEAMLRHLAQDLDEIAEDLEAGATEIRHDEPLP*
Ga0070662_1009225351	3300005457	Corn Rhizosphere	MGMVSDPWCFLVMDRASHYRDLARHARELAEASWQENLEEILCRVARHFDETAEDIEAGSAHPRHPELLR*
Ga0066706_105714592	3300005598	Soil	MVSEPAVFVVMDSASDYRKQADHARQLAEATWQHNLEEMLYRLAQDFDEIAEDIEVGATGVRHPELLR*
Ga0066903_1024017881	3300005764	Tropical Forest Soil	MVSEPKCFVLMNTASDYRNQADHARQLARATCQPNLEEMLYRLAQDFDEIAEDIEAGVTETRHPELLP*
Ga0070716_1004182882	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VVMDHASHFREQADHAWRLADATWQDDLQEMLRRLARDFDEAADNVEAGATEVRHPEPRS
Ga0070712_1001558992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VVMDRASHFREQADHAWRLADATWQDDLQEMLRRLARDFDEAADNVEAGATEVRHPEPRS
Ga0070712_1020051541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VHPITANLARHARELAEASWQDNLEEMLCCLARDFDETAEDIEAGSEEPRHPELLR*
Ga0075434_1010558172	3300006871	Populus Rhizosphere	MGMVSEPWCFLVMDRASHYRDLARHARELAEASWQDNLEEILCRVARHFDETAEDIEAGSADPRHPELLR*
Ga0066710_1024683971	3300009012	Grasslands Soil	MVSEPAVFVVMDSASDYRKQADHARQLAEATWQHNLEEMLYRLAQDFDEIAEDIEVGATGVRHPELLR
Ga0099829_101324292	3300009038	Vadose Zone Soil	MDRASDYRKQADHARQLAEATWQDNLEEILHRLARDFDEIAEDIEAGATEVRHPELLRQAF*
Ga0099828_106444183	3300009089	Vadose Zone Soil	MDRASDYRKQADHARQLAEATWQDNLEEILRRVARDFDEIAEDIEAGAIEVRHPELPRQAF*
Ga0099828_106777121	3300009089	Vadose Zone Soil	LVVVDGASYYREQADHAGQLAEATWQDNLKELLRRLARDFDESAENIEAGARDARHPELLP*
Ga0111539_131860671	3300009094	Populus Rhizosphere	MDRASHYRDLARHARELAEASWQDNLEEMLCCLARDFDETAEDIEAGSTEVR
Ga0099792_101961822	3300009143	Vadose Zone Soil	MNRASDYRKQADHARQLAEATWQDNLEEILHRLARDFDEIAEDIEAGATEVRHPELLRQAF*
Ga0126373_115696282	3300010048	Tropical Forest Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPELLR*
Ga0127503_103177191	3300010154	Soil	AARRGMINASGCYKFMDRASQYRHQADHARRLAEATWQPNLEDILRRLAQDFDETAEDIEVGATEVRHPELLPWLS*
Ga0126378_111035461	3300010361	Tropical Forest Soil	MDRASHYRDEADHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEVGATEMRHPELLP*
Ga0134128_117026872	3300010373	Terrestrial Soil	MDRASHYRDLARHARELAEASWQDNLEEMLCCLARDFDETAEDIEAGSAEPRHPDFLRSAL*
Ga0126381_1034535261	3300010376	Tropical Forest Soil	MDRASHYRDEADHARRLAEVTWQPDLEDMLLRLAQDFDETAEDIEVGATEMRHPELLPQESLGNAFRSRS*
Ga0126383_112265941	3300010398	Tropical Forest Soil	MDGASHYRHEADHARRLAEVTWQPNLEDMLRRLAQDFDETAEDIEAGTTEMRHPELLP*
Ga0137392_116163862	3300011269	Vadose Zone Soil	MNRASDYRKQADHARQLAEATWQDNLEEILHRLARDFDEIAEDIEAGATEVRHPELLRRAF*
Ga0137391_102718233	3300011270	Vadose Zone Soil	MDRASDYRKQADHARQLAEATWQDNLEKILHRLARDFDEIAEDIEAGAIEVRHPELPRQAF*
Ga0137363_106817661	3300012202	Vadose Zone Soil	MDRVSHYRELADHARHLAEATWQDDLEEMLRRLARDFDETAEDVEAGATEARHPEVLR*
Ga0137362_107955923	3300012205	Vadose Zone Soil	MDRASDYRKQADHARQLAEATWQDNLEEMLHRLARDFDEIAEDIEAGATELRHPELLRQAF*
Ga0137362_112590541	3300012205	Vadose Zone Soil	MDRASHFREQADHARRLAEATWQDDLGEMLRRFARDFDKAAKDIEAGATEVRHPEFGS*
Ga0137362_115122031	3300012205	Vadose Zone Soil	MDRVSHYRELADHARHLAEATWQDDLEEMLRRLARDFDETAEDVEAGATEVRHPEVLR*
Ga0137377_101315763	3300012211	Vadose Zone Soil	MDRASHFREQADHARRLAEATWQDDVEEMLRRFARDFDKAATDIEAGATEVRHPEFGS*
Ga0137361_117931392	3300012362	Vadose Zone Soil	MDRASHFREQADRARRLAEAAWQDDLQEMLRRLARDFDEAAEDIEAGATEVRHPELGS*
Ga0137395_110487152	3300012917	Vadose Zone Soil	MNRASDYRKQADHARQLAEATWQDNLEEILRRVARDFDEIAEDIEAGATEVRHPELPRQAF*
Ga0137359_113276843	3300012923	Vadose Zone Soil	VNTCLSARASDYRKQADHARQLAEATWQHDLEEILRRLARDFDEIAEDIEAGATEVRRPELLRQTF*
Ga0182036_104409871	3300016270	Soil	MHRALHYRELPDHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPDLSR
Ga0182033_104092561	3300016319	Soil	MHRARHYRELADHARQLAQASWQDDLAEMLRCLARDFDETADDIEAGATEVRHPDLSR
Ga0182033_104093702	3300016319	Soil	CFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0182034_100115352	3300016371	Soil	MDRASHYRELADHARQLADATWQGDLEELLRRLARDFDDIAEDIGADMTEASHPGPPP
Ga0182034_105762293	3300016371	Soil	REPRASGCRGMIHVPGCFEFMDRASHYRHEADHARRLAEVTCQPDLEDMLRRLAQGFDETAEDIEAGATEMRHPELLP
Ga0182037_112144811	3300016404	Soil	MHRAPHYRELADHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPELSPSEPTVQ
Ga0066667_115555262	3300018433	Grasslands Soil	MDSASDYRKQADHARQLAEATWQHNLEEMLYRLAQDFDEIAEDIEVGATGVRHPELLR
Ga0210403_104144872	3300020580	Soil	MDRASYYHHEADHARRLAEATWQPDLEDMLRRLARDFDETAEDIEVGATEMRHPAPLP
Ga0210403_105360481	3300020580	Soil	MITAPRCFGFMDRASHYHHEADHARRLAEATWQPDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0210403_106962872	3300020580	Soil	CRSCDKQGMITAPRCFGFMDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPEFLP
Ga0210405_114381882	3300021171	Soil	ITAPRCFGFMDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPEFLP
Ga0210387_114856551	3300021405	Soil	MITAPRCFGFMDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDNEAGATGGLEDY
Ga0210402_108452382	3300021478	Soil	MDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMR
Ga0209701_104196502	3300027862	Vadose Zone Soil	MDGASHYRERADHVRQLAEAAWQDDLKETLRRLARDFDDIAEDIEAGATEPR
Ga0075399_108103252	3300030967	Soil	MDRASYYHHEADHARRLAKATWQPDLEDMLRRLARDLDETAEDIEVGATEMRHPELLP
Ga0170834_1101276672	3300031057	Forest Soil	MITAPRCFGFMDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0170823_138031831	3300031128	Forest Soil	MPSCDKQGMITAPRCFGFMDRASYYHHEADHARRLAEVTWQPDLEEMLRGLARDFDEIAEDIESGATEVHHPELLP
Ga0170824_1161971321	3300031231	Forest Soil	MDRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0170824_1173492432	3300031231	Forest Soil	MDRASYYHHEADHARRLAEATWQPDLEDMLRRLARDFDETAEDIEAGATEMRPPEPLP
Ga0170820_105802602	3300031446	Forest Soil	FRFMDRASYYHHEADHARRLAEATWQPDLEDMLRRLARDFDESAEDIEVGATEMRHPEPL
Ga0170820_151746702	3300031446	Forest Soil	MDRASHYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0170819_159921921	3300031469	Forest Soil	MITAPRCFGFMDRASHYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0170818_1041542181	3300031474	Forest Soil	VRSGEITSADWVDVPSCDKQGMITAPRCFGFMDRASYYHHEADHARRLAEVTWQPDLEEMLRGLARDFDEIAEDIESGAT
Ga0170818_1068121281	3300031474	Forest Soil	MITAPRCFGFMNRASYYHCEADHARRLAEATWQSDLEDMLRRLARDFDETAEDIEAGATEMRHPELLP
Ga0170818_1106672621	3300031474	Forest Soil	MYKGVFEFMDCASHYRRQADHARQLAKATLQPNLEEMLRHLAQDFDEIAYDIDSGPTEVRHPE
Ga0318516_100325084	3300031543	Soil	MIAAPRCFEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEARATEIRHDEPLR
Ga0318516_100482593	3300031543	Soil	MNRASNYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPELLR
Ga0318516_100546542	3300031543	Soil	MIHVPVCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318541_100146638	3300031545	Soil	VCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318541_100188712	3300031545	Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPELLR
Ga0318541_100287674	3300031545	Soil	MIAAPRCFEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEVRATEIRHDEPLR
Ga0318571_101589523	3300031549	Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAKM
Ga0318573_100146044	3300031564	Soil	MDRASDYHKQADHARQLAEATWQHNLEEMLHRLARDFGEIAEDIEAGATEVRHPELLR
Ga0318573_101907961	3300031564	Soil	SHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318515_105505322	3300031572	Soil	MDRASHYRHEVDHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPR
Ga0310915_100127003	3300031573	Soil	MDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0310915_100447603	3300031573	Soil	LCDEQGMIAAPRCFEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEARATEIRHDEPLR
Ga0318555_102340161	3300031640	Soil	DRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318555_103535001	3300031640	Soil	LCDEQGMIAAPRCFEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEVRATEIRHDEPLR
Ga0318561_105094601	3300031679	Soil	MDRASHYRHEVDHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPRFCSR
Ga0318560_100255184	3300031682	Soil	MNRASYYRQHAEHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPELLR
Ga0307474_114636332	3300031718	Hardwood Forest Soil	MDRASHYRHEADHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPEILL
Ga0318492_106307862	3300031748	Soil	MIHVPGCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318494_102173082	3300031751	Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPE
Ga0318494_106744142	3300031751	Soil	MIHVPVCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPELLP
Ga0307477_101033562	3300031753	Hardwood Forest Soil	MINAPGCFEFMDRASHYRHQADHARRLAEAAWQTDLQDMLRRVARDFDETAEDIEAGATEMRRPELLP
Ga0307477_101071533	3300031753	Hardwood Forest Soil	MVSDQQCFVVMDRASDYRKQADHARQLAEATWQDNLEEMLHRLARDFDEIAEDIEAGATELRHPELLRQAF
Ga0318543_100693163	3300031777	Soil	FEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEARATEIRHDEPL
Ga0318547_101764392	3300031781	Soil	MDRASHYRHEVDHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPEILL
Ga0318557_101754241	3300031795	Soil	MIHVPVCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIE
Ga0318523_101154984	3300031798	Soil	HVPVCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318567_108548472	3300031821	Soil	MIHVPGCFEFMDRASHYRHEADHARRLAEVTCQPDLEDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318567_108992931	3300031821	Soil	GMIAAPRCFEFMDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEVRATEIRHDEPLR
Ga0310917_100670012	3300031833	Soil	MDRASDYRELAEHARQLAEATWQHNLEEMLHRLARDFGEIAEDIEAGATEVRHPELLR
Ga0318517_101982161	3300031835	Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRH
Ga0318511_103017761	3300031845	Soil	SYYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318527_103405981	3300031859	Soil	HKQADHARQLAEATWQHNLEEMLHRLARDFGEIAEDIEAGATEVRHPELLR
Ga0318495_102052881	3300031860	Soil	SHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPELLP
Ga0318544_102087532	3300031880	Soil	ASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHPELLR
Ga0318544_102196202	3300031880	Soil	MDRASHYRHEADHARRLAEVTCQPDLEDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0306925_114599771	3300031890	Soil	MHRALHYRELPDHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPELSPSEPTVQ
Ga0318536_106331831	3300031893	Soil	MDRAPRYRELADHARQLAQASWQDDLAEMLRCLARDFDEIADDIEAGATEVRHPDLSR
Ga0318551_101074193	3300031896	Soil	MDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEARATEIRHDEPLR
Ga0318551_103909702	3300031896	Soil	MIHVPVCFEFMDRASHYRHEADHARRLAEVTCQPDLEDMLRRLAQGFDETAEDIEAGATEMRHPELLP
Ga0310910_105700111	3300031946	Soil	MHRALHYRELPDHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPELSPSEPTVQPRRSRLRSAHV
Ga0318531_100119735	3300031981	Soil	MNRASYYRQHADHARKLAEATWQHDLEEMLRRLAREFDETAEDIEAGAAEMRHP
Ga0310911_103978051	3300032035	Soil	MHRALHYRELPDHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPELSPSEP
Ga0318549_100373524	3300032041	Soil	MIHVPGCFEFMDRASHYRHEADHARRLAEVTCQPDLEDMLRRLAQGFDETAEDIEAGATEMRHPELLP
Ga0318532_102951441	3300032051	Soil	VPVCFEFMDRASHYRHEADHARRLAEVTWQPDLDDMLRRLAQGFDETAEDIEAGATEMRHPEFLP
Ga0318505_102979481	3300032060	Soil	IMHRALHYRELPDHARQLAQATWQDDLEEMLGCLARDFEIADDIEAGATEVRHPDLSR
Ga0318525_107263352	3300032089	Soil	MDRASHYRHEVDHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPRFCSRN
Ga0318518_106205142	3300032090	Soil	MDRASHYRHEVDHARRLAEVTWQPDLEDMLRRLAQDFDETAEDIEAGATEMRHPRFCSRNPL
Ga0307472_1013849592	3300032205	Hardwood Forest Soil	MDRASDYRHQADHARKLAEATWQLDLEDMLRHLAQDLDEIADDLEARATEIRHEKGVANQLVIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences