NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096087

Metagenome Family F096087

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096087
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 64 residues
Representative Sequence MRRYGMYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWLSMAIVAGAGLLIALANHVGTW
Number of Associated Samples 97
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.10 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 94.29 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(12.381 % of family members)
Environment Ontology (ENVO) Unclassified
(28.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.333 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.44%    β-sheet: 0.00%    Coil/Unstructured: 39.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00156Pribosyltran 15.24
PF13411MerR_1 1.90
PF02880PGM_PMM_III 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.95
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.14 %
UnclassifiedrootN/A2.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02JH22BAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
2170459012|GOYVCMS02JD5I4All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
2170459024|GZRSKLJ01ANQVEAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300002568|C688J35102_120582617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1206Open in IMG/M
3300004063|Ga0055483_10051920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1212Open in IMG/M
3300004081|Ga0063454_100658844All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300004081|Ga0063454_101565143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300004153|Ga0063455_100475896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300004157|Ga0062590_101239852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria730Open in IMG/M
3300004633|Ga0066395_10930526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300004643|Ga0062591_101113322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria762Open in IMG/M
3300005177|Ga0066690_11078961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300005329|Ga0070683_101242762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria716Open in IMG/M
3300005332|Ga0066388_101625308All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300005344|Ga0070661_101697627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300005436|Ga0070713_101220670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria728Open in IMG/M
3300005437|Ga0070710_10094592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1768Open in IMG/M
3300005444|Ga0070694_101901712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300005454|Ga0066687_10806059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300005454|Ga0066687_10837059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300005529|Ga0070741_10568847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1016Open in IMG/M
3300005530|Ga0070679_101431429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria638Open in IMG/M
3300005536|Ga0070697_100950980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria763Open in IMG/M
3300005544|Ga0070686_100414720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1027Open in IMG/M
3300005546|Ga0070696_101555958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300005552|Ga0066701_10078164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1891Open in IMG/M
3300005560|Ga0066670_10048241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2193Open in IMG/M
3300005569|Ga0066705_10283949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1050Open in IMG/M
3300005576|Ga0066708_10818014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300005586|Ga0066691_10599579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria655Open in IMG/M
3300005587|Ga0066654_10403201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300005615|Ga0070702_100063035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2163Open in IMG/M
3300005898|Ga0075276_10157042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
3300005899|Ga0075271_10010678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1663Open in IMG/M
3300005900|Ga0075272_1056615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium728Open in IMG/M
3300005905|Ga0075269_10084954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300006163|Ga0070715_10860879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300006163|Ga0070715_10938846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300006358|Ga0068871_101841584Not Available575Open in IMG/M
3300006800|Ga0066660_10512563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1008Open in IMG/M
3300006800|Ga0066660_10694282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria837Open in IMG/M
3300006806|Ga0079220_10307558All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300006806|Ga0079220_11338454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300006871|Ga0075434_102159750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300007788|Ga0099795_10531882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium552Open in IMG/M
3300009137|Ga0066709_100608765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1557Open in IMG/M
3300010046|Ga0126384_10822859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria833Open in IMG/M
3300010048|Ga0126373_12761758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300010303|Ga0134082_10556975Not Available505Open in IMG/M
3300010304|Ga0134088_10591259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria551Open in IMG/M
3300010323|Ga0134086_10068117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1226Open in IMG/M
3300010337|Ga0134062_10455944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300010358|Ga0126370_10555647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria982Open in IMG/M
3300010360|Ga0126372_12775432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300010366|Ga0126379_11217427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300010373|Ga0134128_13182205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300010375|Ga0105239_10993024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria965Open in IMG/M
3300010375|Ga0105239_13108712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300010376|Ga0126381_103181605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria649Open in IMG/M
3300010396|Ga0134126_13050248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300010398|Ga0126383_11426225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300012199|Ga0137383_10198778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1469Open in IMG/M
3300012349|Ga0137387_10552337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria835Open in IMG/M
3300012923|Ga0137359_10636737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria933Open in IMG/M
3300012948|Ga0126375_10794188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria749Open in IMG/M
3300012975|Ga0134110_10365444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria634Open in IMG/M
3300012977|Ga0134087_10720079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300012985|Ga0164308_10350035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1192Open in IMG/M
3300013100|Ga0157373_11346637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300013306|Ga0163162_10245007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1924Open in IMG/M
3300014325|Ga0163163_12747057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium549Open in IMG/M
3300014968|Ga0157379_12106227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria559Open in IMG/M
3300015262|Ga0182007_10417342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300016357|Ga0182032_10983627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300017659|Ga0134083_10525005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300017939|Ga0187775_10424432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300017993|Ga0187823_10197880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300018433|Ga0066667_10231036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1386Open in IMG/M
3300018468|Ga0066662_10887024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria874Open in IMG/M
3300018482|Ga0066669_12268922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300024290|Ga0247667_1016625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1446Open in IMG/M
3300024331|Ga0247668_1001691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei5040Open in IMG/M
3300025898|Ga0207692_10717220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria650Open in IMG/M
3300025915|Ga0207693_11099958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria604Open in IMG/M
3300025917|Ga0207660_11466976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300025921|Ga0207652_10053360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3472Open in IMG/M
3300025928|Ga0207700_10928695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium779Open in IMG/M
3300025928|Ga0207700_12014150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300025939|Ga0207665_10291323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1218Open in IMG/M
3300026078|Ga0207702_10933620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria860Open in IMG/M
3300026552|Ga0209577_10553017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria731Open in IMG/M
3300026816|Ga0207509_109351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300027456|Ga0207482_105233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300028597|Ga0247820_10782665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria670Open in IMG/M
3300031198|Ga0307500_10316552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300031344|Ga0265316_11173004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300031716|Ga0310813_11868253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300031736|Ga0318501_10167203All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300031751|Ga0318494_10430314Not Available767Open in IMG/M
3300031912|Ga0306921_10847227All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300031938|Ga0308175_100168043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2124Open in IMG/M
3300031938|Ga0308175_103136872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300031996|Ga0308176_11634121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria687Open in IMG/M
3300033004|Ga0335084_10107708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2897Open in IMG/M
3300033550|Ga0247829_10542611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria965Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.43%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.81%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.90%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.95%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.95%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.95%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004063Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005898Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405EnvironmentalOpen in IMG/M
3300005899Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302EnvironmentalOpen in IMG/M
3300005900Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404EnvironmentalOpen in IMG/M
3300005905Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026816Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)EnvironmentalOpen in IMG/M
3300027456Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-E (SPAdes)EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_121568002170459005Grass SoilMRSYGMYDASRGLTLAFAAAWRVSLSWGARRSEPRTDGHFWIAMAIVAGAGLVL
N56_079536702170459012Grass SoilLYDASRGLTLAFAAALAGLGLWGAAQVGTQTPGRFWIAMVIIGGAGLVLTLANHVGTWTKGLRLR
FD1_088078002170459024Grass SoilMRRYGLYDTSRGLTLALAAGLAGLGLWGAAQVGTQTTGRFWLAMLAVAGAGLLIALANHVGT
C688J35102_12058261733300002568SoilMRHYGMYDASRGLTIGFAAALAGLALWGATQVGMQTTGRFWIAMAIVAASGLVLALASHVGMWTKGLRL
Ga0055483_1005192033300004063Natural And Restored WetlandsMRSFGMYDATRGLTLALFAGLAGLALWGATQVGTYATWRFWVAMAIVATAGLLLALARHLGTWTKGLRLRLSVGTLVLAA
Ga0063454_10065884413300004081SoilMRRYGLYDASRGLTLALAAALAGLGLWAATQVGVQTTGRFWISMAIVAGAGLLIALAGHVGTWTKGLRL
Ga0063454_10156514313300004081SoilMRRYGLYDASRGLTLALAAALAGLALWGATQIGMQTTGRFWISMAIVAGAGLLIALANHVGTWTKG
Ga0063455_10047589613300004153SoilMHRYGLYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWISMAIVAGAGLLI
Ga0062590_10123985213300004157SoilMRRYGMYDASRGLTLALAAALAGLALWGATQVGMQTTGRFWLSMAIVAGAGLLIALAAHVGTWTKGLRLRVSP
Ga0066395_1093052613300004633Tropical Forest SoilMRRYALYDASRGLTLAFAAGLAGLALWGASQVGTQTQGRFWIAMVIVGAAGLLLALASHVGTWAKGLRLRLSPVTFLFAF
Ga0062591_10111332213300004643SoilMRSYGMYDASRGLTLAFAAALAGLGLWGATQVGTQTTERFWIAMAIVAG
Ga0066690_1107896113300005177SoilMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAGAGLVMALANHVGTW
Ga0070683_10124276223300005329Corn RhizosphereMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVAGAGLVLALTNHVGTWT
Ga0066388_10162530813300005332Tropical Forest SoilMRHYGMYDASRGLTLAFAAALAGLGLWGATQVGTQTTERFWIAMAIVGAAGLLIALANHVGTWTKGLR
Ga0070661_10169762713300005344Corn RhizosphereMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVAGAGLVL
Ga0070713_10122067023300005436Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLALAAALAGLGLWGASEVGTQTTGRFWIAMAIVAGAGLVMALANHVGTWTKGLSMRISPSTFVIA
Ga0070710_1009459213300005437Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVAGAGLVLA
Ga0070694_10190171213300005444Corn, Switchgrass And Miscanthus RhizosphereMRRYGLYDASRGLTLALAAALAGLGLWGATQVGMQTIGRFWISMAIVAGAGLLIALAAHVGTWTKGLRLRVSPG
Ga0066687_1080605913300005454SoilMRHYGMYDASRGLTLALAAALAGFGLWGAAEVGTQTPGRFWIAMAIVGAAGLVITLANHVGTWTKGLRL
Ga0066687_1083705923300005454SoilMRSYGLYDASRGLTLALAAALAGLALWGAAEVGTQTPGRFWIAMAIVGGAGLALALANHVGTWTKGLRLRVS
Ga0070741_1056884723300005529Surface SoilMRSYGLYDASRGLTLALAGALAGLALWGAAEVGTQTTGRFWIAMAIVGGAGLVLALANHVGTWTKGLRLRTSLGTFAL
Ga0070679_10143142923300005530Corn RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAIVAGAGLVIALANHVGTWTKGLRLRMSPG
Ga0070697_10095098023300005536Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAAAGLVMA
Ga0070686_10041472013300005544Switchgrass RhizosphereMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVA
Ga0070696_10155595813300005546Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAAAGLVMALANHVGTWTKGLRMRVSP
Ga0066701_1007816443300005552SoilMRSYGLYDASRGLTLALAAALAGLALWGAAEVGTQTPGRFWIAMAIVGGAGLVL
Ga0066670_1004824113300005560SoilMRSYGIYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAAAGLVMALANHVGTWTKGLRMR
Ga0066705_1028394913300005569SoilMRRYGLYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAG
Ga0066708_1081801413300005576SoilMRHYGMYDASRGLTLALAAALAGLGLWGAAEVGTQTPGRFWIAMAIVGAAGLVITLANHVGTWTKGLR
Ga0066691_1059957923300005586SoilMRRYGMYDASRGLTLAFAAALAGLGLWGAAQIGTQTQGRFWVAMAVVAGAGLLL
Ga0066654_1040320123300005587SoilMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAGAGLVMALA
Ga0070702_10006303543300005615Corn, Switchgrass And Miscanthus RhizosphereMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWLSMAIVAGAGLLIALAAHVGTWTKGLR
Ga0075276_1015704213300005898Rice Paddy SoilMRRYGMYDASRGLTLAFAAALAGLGLWGAAQVGTQTTGRFWIAMAIVG
Ga0075271_1001067843300005899Rice Paddy SoilMRRYGMYDASRGLTLAFAAALAGLGLWGAAQVGTQTTGRFWIAMAIVGGAGLLIALANHVGTWTKGLRLRMSPSTFALAFL
Ga0075272_105661513300005900Rice Paddy SoilMRRYGMYDASRGLTLAFAAALAGLGLWGAAQVGTQTTGRFWIAMAIVGGAGLLIALANHVGTWTKGLRLRMSPST
Ga0075269_1008495423300005905Rice Paddy SoilMRRYGMYDASRGLTLAFAAALAGLALWGAAQIGTQTNGRFWIAMAV
Ga0070715_1086087923300006163Corn, Switchgrass And Miscanthus RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGFVIATATHVGT
Ga0070715_1093884613300006163Corn, Switchgrass And Miscanthus RhizosphereMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWISMAIVAGAGLLI
Ga0068871_10184158413300006358Miscanthus RhizosphereMRSYGMYDVTRGLTLALAAGLAGLGLWGATQVGTGTTWRFWIAMAVVAAAGFLLTLATHVGTWTKGLRM
Ga0066660_1051256323300006800SoilMRHYGMYDASRGLTLALAAALAGFGLWGAAEVGTQTPGRFWIAMAIVGAAGLVITLANHVGTWTKGLQLRMSPSTFALAFL
Ga0066660_1069428233300006800SoilMRRYGMYDASRGLTLAFAAALAGLGLWGAAQIGTQTPGRFWVAMAVVAGAGLLLTLANHVGTWTKGLRLRLSVG
Ga0079220_1030755823300006806Agricultural SoilMRRYGLYDASRGLTLALAAALAGLGLWGAAQIGVQTTARFWISMAVVAGAGLLIALAN
Ga0079220_1133845413300006806Agricultural SoilMRSYGMYDASRGLTLAFAAALAGLGLWGASQVGTQTNARFWIAMAIVGAAGLLIALANHVGTWTKGLRLRLSPGTFVLAFLP
Ga0075434_10215975023300006871Populus RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWLSMAIVAGAGLLIALANHVGTW
Ga0099795_1053188213300007788Vadose Zone SoilMRRYGLYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGLVIALAGHVGTWTKGLRLRMSPGTFVLAFLP
Ga0066709_10060876513300009137Grasslands SoilMRSYGMYDASRGLTLALAAALAGLALWGASQVGTQTTGRFWLAMVVVAAAGFVFALATHVGTWTKGLRLRVSPTTF
Ga0126384_1082285923300010046Tropical Forest SoilMRNYRTYDASRGLALALAAALAGLALWGAGQVGTQTTGHFWIAMAIVAGAGLLLALASHVGMWT
Ga0126373_1276175823300010048Tropical Forest SoilMYDASRGLTLLFAAALVGLALWGASQIGTQTTNRFWLAMLIVAGAGLVLS
Ga0134082_1055697523300010303Grasslands SoilMRHYGMYDASRGLTLALAAALAGLGLWGAAKVGTQTPGRFWIAMAIVGAAGLVITLANHVGTW
Ga0134088_1059125923300010304Grasslands SoilMRRYGLYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWLSMLIVAGAG
Ga0134086_1006811713300010323Grasslands SoilLYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWLSMLIVAGAGLVIALAGHVGTWTKGLRLRVSPGTFVLA
Ga0134062_1045594413300010337Grasslands SoilLYDASRGLTLALAAALAGLGLWGATQVGMQTTGRFWLSMLIVAGAGLVIALAAHV
Ga0126370_1055564723300010358Tropical Forest SoilMRRYGLYDAFRGLTLALAAALAGLGLWGAAQVGMQTTPRFWISMAVVAGAGLLIALANHVGTWTKGLRL
Ga0126372_1277543213300010360Tropical Forest SoilMRRYGLYDASRGLTLALAAALAGLGLWGASQLGMQTNGRFWLSLAIVGAAGLLIA
Ga0126379_1121742713300010366Tropical Forest SoilMYDASRGLTLALAAALAGLGLWGAAQIGVQTTARFWVSMAVVAGAGLLIALANHVGTWTKGLRLRMSPSTFALAF
Ga0134128_1318220513300010373Terrestrial SoilMRSYGTYDASRGLTLALAAALAGLGLWGASQVGTQTTGRFWIAMAIVAAGGLVLALAGHVGTWTKG
Ga0105239_1099302413300010375Corn RhizosphereMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAAAGL
Ga0105239_1310871213300010375Corn RhizosphereMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAVVAGAGLLIALANHVGTWTKGLRL
Ga0126381_10318160513300010376Tropical Forest SoilLYDASRGLTLALAAALVGLALWGATQVGVQTTGRFWLSMAIVAGAGLLMALANHVGTWTK
Ga0134126_1305024813300010396Terrestrial SoilMRSYGMYDASRGLTLALAAALAGLGLWGASEVGTQTTGRFWIAMAIVAGAGLVMALANHVGT
Ga0126383_1142622513300010398Tropical Forest SoilMYDASRGLTLALAAALAGLGLWGAAQVGTQTDGRFWIAMTIVGAAG
Ga0137383_1019877833300012199Vadose Zone SoilMRRYGLYDASRGLTLAFAAALAGLGLWGASQVGTQTTGRFWLAMAIVAGAGLLLALANHVGTGA
Ga0137387_1055233713300012349Vadose Zone SoilMRRYALYDASRGLTLAFAAALAGLGLWGASQVGTQTTGRFWLAMAVVAGAGLLLALANHGGTWAKGLRLRM
Ga0137359_1063673713300012923Vadose Zone SoilMRRYGLYDASRGLTLAFAAALAGLGLWGASQVGTQTTGRFWLAMVVVAGAGLLLALANHV
Ga0126375_1079418813300012948Tropical Forest SoilMRRYGLYDASRGLTLALAAALAGLGLWGATRIGMQTTGRFWLSMLIVAGAGLLIALAGHVGTWTKGLRLRI
Ga0134110_1036544413300012975Grasslands SoilMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWISMAIVAGAGLLIALAAHVGTWTKGLTLR
Ga0134087_1072007913300012977Grasslands SoilMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWITMAIVAGTGLLIALANHVGTWTKGLRLRMSPSTF
Ga0164308_1035003513300012985SoilMRSYGMYDVSRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAVVAGAGLLI
Ga0157373_1134663723300013100Corn RhizosphereMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAVVAGAAWAGT
Ga0163162_1024500713300013306Switchgrass RhizosphereMRRYGLYDASRGLTLAVAAALAGLGLWGATQVGMQTIGRFWISMAIVAGAGLLIA
Ga0163163_1274705723300014325Switchgrass RhizosphereMYDASRGLTLGFAAALAGFALWGATQVGTQTQGRFWLAMAIVAGAGLLLPLASHVGTWTKGLRLRLSPTTFAL
Ga0157379_1210622713300014968Switchgrass RhizosphereMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWLSMAIVAGAGLLIALAAHVGA
Ga0182007_1041734223300015262RhizosphereMRSYGTYDASRGLTLAFAAALAGFGLWGASQIGTQTTNRFWTAMAIVAGAGLLI
Ga0182032_1098362723300016357SoilMRRYGMYDASRGLTLALAAALAGLGLWCATQIGMQTAGRFWLSMLIVAGAGFLIALATHVGTWTK
Ga0134083_1052500523300017659Grasslands SoilMRRYGMYDASRGLTLALAAALAGLALWGATQVGMQTTGRFWITMAIVAGAGLLIALANHVGTWT
Ga0187775_1042443213300017939Tropical PeatlandMRGYGMYDASRGLTLAFAAGSAGLALWGAAQVGTQTPGRFWIAMAIVAAAGLLIALTNHV
Ga0187823_1019788013300017993Freshwater SedimentMRSFGMYDASRGLTLAFAAALAGLGLWGATQVGVQTQGRFWIAMAIVAGAGLLLALANHVGTWT
Ga0066667_1023103613300018433Grasslands SoilMRHYGMYDASRGLTLALAAALAGLGLWGAAEVGTQTPGRFWIAMAIV
Ga0066662_1088702413300018468Grasslands SoilMRRYGLYDASRGLTLAFAAALAGLGLWGASQVGAQTTGRFWLAMAVVAGAGLLLALANHVGTWTK
Ga0066669_1226892223300018482Grasslands SoilMRRYGLYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGLVIALAGHVGTWTKGLRL
Ga0247667_101662533300024290SoilMRSYGTYDASRGLTLALAAALAGLALWGAAQVGTQTTGRFWIAMAVVAGAGLMLALANHVGTWTKGLRMR
Ga0247668_100169113300024331SoilMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGFVIAVATHVGTWTKGLRLRL
Ga0207692_1071722023300025898Corn, Switchgrass And Miscanthus RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQVGMQTTERFWISMAVVAGAGLLI
Ga0207693_1109995813300025915Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAIVAGAGLLIALANHVGTWTKGLRLRMS
Ga0207660_1146697613300025917Corn RhizosphereMRSYGMYDASRGLTLALAAALAGLALWGASEVGTQTTGRFWVAMAIVAAAGLVMAL
Ga0207652_1005336073300025921Corn RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAVVAGAGLLIALANHVGTWTKGL
Ga0207700_1092869523300025928Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLALAAALAGLGLWGASEVGTQTTGRFWIAMAIVAGAGLVMALANHVGTWTKGLSMRISPSTFVIAFLP
Ga0207700_1201415013300025928Corn, Switchgrass And Miscanthus RhizosphereMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVAGAGLVLALTNHVGTWTKGLRLRVSPSTFA
Ga0207665_1029132323300025939Corn, Switchgrass And Miscanthus RhizosphereMRSYAMYDITRGLTIALAAGLAGLGLWGATQIGTQTTGDFWLAMAVVAAAGFVFALAAHVGAWTKGLRL
Ga0207702_1093362013300026078Corn RhizosphereMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGFVIATATHV
Ga0209577_1055301723300026552SoilMRHYGMYDASRGLTLALAAALAGLGLWGAAEVGTQTPGRFWIAMAIVGAAGLVITLANHVGTWTKGLRLRVS
Ga0207509_10935123300026816SoilMRSYGMYDASRGLTLAFAAGVAGFALWGAAQVGTQTDGHFWIAMAIVAGAGAIDVIDTGTLTR
Ga0207482_10523323300027456SoilMRSYGMYDASRGLTLAFAAGVAGFALWAAAQVGTQTDGHFWIAMAIVAGAGLVLAL
Ga0247820_1078266523300028597SoilMRRYGLYDASRGLTLAFAAALAGLGLWGATQVGMQTTGRFWLSMAIVAGAGLLIALAAHV
Ga0307500_1031655213300031198SoilMRRYGLYDASRGLTLAVAAALAGLGLWGATQVGMQTNGRFWISMAIVAGAGLLIALAA
Ga0265316_1117300423300031344RhizosphereMRSYGMYDLTRGLTLALVAGLAGLGLWGAAQVGTQTDGRFWVAVAIVAAAGFVVVV
Ga0310813_1186825313300031716SoilMRRYGMYDASRGLTLALAAALAGLGLWGATQIGMQTTGRFWLSMAIVAGAGLLIALANHVGTWTKG
Ga0318501_1016720313300031736SoilMRRYGMYDASRGLTLALAAALAGLGLWCATQIGMQTAGRFWLSMLIVAGAGFLIALATHVGTWTKGLRLRVSPGTFALAF
Ga0318494_1043031413300031751SoilMRSYAMYDVTRGLTIALAAGLAGLGLWGAAQIGVQSTGRFWLAMAVVAAAGFVL
Ga0306921_1084722713300031912SoilMRRYGMYDASRGLTLALAAALAGLGLWCATQIGMQTAGRFWLSMLIVAGAGFLIALATHVGTWTKGLRL
Ga0308175_10016804343300031938SoilMRSYGTYDASRGLTLALAAALAGLALWGAAQVGTQTTGRFWIAMAIVAGAGL
Ga0308175_10313687213300031938SoilMRSYGMYDASRGLTLALAAALAGLGLWGAAQIGIQTTNRFWLTMAVVAGAGFLLTL
Ga0308176_1163412123300031996SoilMRRYGLYDASRGLTLAVAAALAGLGLWGATQIGMQTTGRFWLSMLIVAGAGLLIALAGHVGTWTKGLRLRVS
Ga0335084_1010770863300033004SoilMRSYGMYDVSRGLTLALAAALAGLWLWGATQIGMQTTGRFWLSMAVVAGAGLLIALANHVGT
Ga0247829_1054261123300033550SoilMRRYGLYDASRGLTLALAAALAGLGLWGATQVGMQTNGRFWISMAIVAGAGLVIALAAHVGTWTKGLRLRVSPSTFT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.