Metagenome Family F096163

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096163
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	62 residues
Representative Sequence	LKLDHSLPTERAGGFRTARWNLVSLAAQSQAPDSQAAPLQADEEIHALCEALIASEGQLGL
Number of Associated Samples	56
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.43 %
% of genes near scaffold ends (potentially truncated)	64.76 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.762 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.143 % of family members)
Environment Ontology (ENVO)	Unclassified (55.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.81% β-sheet: 0.00% Coil/Unstructured: 47.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00069	Pkinase	26.67
PF06210	DUF1003	2.86
PF05729	NACHT	1.90
PF03050	DDE_Tnp_IS66	1.90
PF02746	MR_MLE_N	0.95
PF13191	AAA_16	0.95
PF13411	MerR_1	0.95
PF00873	ACR_tran	0.95
PF01609	DDE_Tnp_1	0.95
PF01547	SBP_bac_1	0.95
PF01051	Rep_3	0.95
PF04679	DNA_ligase_A_C	0.95
PF06568	DUF1127	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	106.67
COG4420	Uncharacterized membrane protein	Function unknown [S]	2.86
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.90
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.90
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.95
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.95
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.95
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.95
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.95
COG5527	Protein involved in initiation of plasmid replication	Mobilome: prophages, transposons [X]	0.95
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.10 %
Unclassified	root	N/A	35.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.14 %
Unclassified	root	N/A	35.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	35.24 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	35.24 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	35.24 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	35.24 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101305824	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300001867\|JGI12627J18819_10345844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300001867\|JGI12627J18819_10357016	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_100911753	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300005332\|Ga0066388_102347202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300005332\|Ga0066388_103384167	Not Available	815	Open in IMG/M
3300005332\|Ga0066388_106579759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005332\|Ga0066388_107909263	Not Available	532	Open in IMG/M
3300005434\|Ga0070709_11642076	Not Available	524	Open in IMG/M
3300005437\|Ga0070710_11268434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005467\|Ga0070706_100069310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3262	Open in IMG/M
3300005467\|Ga0070706_100780805	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005468\|Ga0070707_100943453	Not Available	828	Open in IMG/M
3300005468\|Ga0070707_101116374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005471\|Ga0070698_100670963	Not Available	978	Open in IMG/M
3300005471\|Ga0070698_100990736	Not Available	787	Open in IMG/M
3300005471\|Ga0070698_101867766	Not Available	553	Open in IMG/M
3300005536\|Ga0070697_100696026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300005764\|Ga0066903_100052344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4991	Open in IMG/M
3300005764\|Ga0066903_101928325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300005764\|Ga0066903_103178659	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005764\|Ga0066903_103657610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300005764\|Ga0066903_103833132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300005764\|Ga0066903_103967013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300005764\|Ga0066903_106813006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005764\|Ga0066903_108519836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006028\|Ga0070717_11346268	Not Available	649	Open in IMG/M
3300010046\|Ga0126384_11352800	Not Available	662	Open in IMG/M
3300010046\|Ga0126384_12033187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010048\|Ga0126373_11169176	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300010341\|Ga0074045_10352270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300010358\|Ga0126370_12226263	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010362\|Ga0126377_12281316	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300010366\|Ga0126379_10550393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300010366\|Ga0126379_12143771	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010376\|Ga0126381_100961199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300010376\|Ga0126381_101927258	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300010376\|Ga0126381_104515927	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010398\|Ga0126383_11035521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300010398\|Ga0126383_11792789	Not Available	702	Open in IMG/M
3300012971\|Ga0126369_10936849	Not Available	952	Open in IMG/M
3300012971\|Ga0126369_12886849	Not Available	563	Open in IMG/M
3300012988\|Ga0164306_11523481	Not Available	574	Open in IMG/M
3300016270\|Ga0182036_11025217	Not Available	681	Open in IMG/M
3300016294\|Ga0182041_10377194	Not Available	1200	Open in IMG/M
3300016294\|Ga0182041_11577963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300016294\|Ga0182041_12315817	Not Available	503	Open in IMG/M
3300016319\|Ga0182033_10515636	Not Available	1029	Open in IMG/M
3300016341\|Ga0182035_11833268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300016371\|Ga0182034_10508740	Not Available	1006	Open in IMG/M
3300016371\|Ga0182034_10611361	Not Available	920	Open in IMG/M
3300016371\|Ga0182034_10628936	Not Available	908	Open in IMG/M
3300016371\|Ga0182034_10859917	Not Available	778	Open in IMG/M
3300016404\|Ga0182037_11849539	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300016404\|Ga0182037_12103423	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300016422\|Ga0182039_10545808	Not Available	1007	Open in IMG/M
3300016422\|Ga0182039_10721899	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300016422\|Ga0182039_10757507	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300016445\|Ga0182038_10121581	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300016445\|Ga0182038_10399718	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300021560\|Ga0126371_11026300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300025898\|Ga0207692_10479714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300025922\|Ga0207646_10101648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2577	Open in IMG/M
3300031545\|Ga0318541_10469690	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031573\|Ga0310915_10422445	Not Available	947	Open in IMG/M
3300031573\|Ga0310915_10509248	Not Available	855	Open in IMG/M
3300031719\|Ga0306917_10374759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300031719\|Ga0306917_10473429	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031719\|Ga0306917_10561699	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031719\|Ga0306917_11213140	Not Available	585	Open in IMG/M
3300031747\|Ga0318502_10347172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300031754\|Ga0307475_11352669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031768\|Ga0318509_10820787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031771\|Ga0318546_10514337	Not Available	840	Open in IMG/M
3300031792\|Ga0318529_10271330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300031831\|Ga0318564_10400490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031833\|Ga0310917_10769309	Not Available	651	Open in IMG/M
3300031879\|Ga0306919_10046997	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300031879\|Ga0306919_10066333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2444	Open in IMG/M
3300031879\|Ga0306919_10908046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300031890\|Ga0306925_10943671	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300031890\|Ga0306925_11858679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300031897\|Ga0318520_10034368	All Organisms → cellular organisms → Bacteria	2562	Open in IMG/M
3300031897\|Ga0318520_10937661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300031912\|Ga0306921_10068279	All Organisms → cellular organisms → Bacteria	4072	Open in IMG/M
3300031912\|Ga0306921_12347720	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031941\|Ga0310912_10154231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1735	Open in IMG/M
3300031941\|Ga0310912_10707909	Not Available	780	Open in IMG/M
3300031942\|Ga0310916_10451137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300031942\|Ga0310916_11617034	Not Available	526	Open in IMG/M
3300031945\|Ga0310913_11251738	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031946\|Ga0310910_10562655	Not Available	905	Open in IMG/M
3300031954\|Ga0306926_11208549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300031954\|Ga0306926_12445043	Not Available	574	Open in IMG/M
3300032001\|Ga0306922_10698323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300032001\|Ga0306922_10867715	Not Available	939	Open in IMG/M
3300032001\|Ga0306922_11327551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300032060\|Ga0318505_10372354	Not Available	675	Open in IMG/M
3300032076\|Ga0306924_10123027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2953	Open in IMG/M
3300032076\|Ga0306924_10919238	Not Available	966	Open in IMG/M
3300032076\|Ga0306924_11542804	Not Available	703	Open in IMG/M
3300032261\|Ga0306920_101606224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	925	Open in IMG/M
3300032261\|Ga0306920_103808755	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032261\|Ga0306920_103966566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300033289\|Ga0310914_10736790	Not Available	882	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.38%
Loam	Environmental → Terrestrial → Soil → Loam	26.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1013058241	3300000955	Soil	LKLDHSLPTERAGGFRTAQWNLVFLAAQSQAPDSQATQLKADKEIHALCEALIAWEGRSDP*
JGI12627J18819_103458442	3300001867	Forest Soil	SLPTEDAGGFRTARRNLVLLGARSKAPDSQGAPLLAHEEIHVHCEALIASVGRLGP*
JGI12627J18819_103570162	3300001867	Forest Soil	LKLDHSLATDGAAGLRTARWNLVLLAAKSQAPDSQVAALQVEEEIHALCEALIASEGRVGP*
Ga0066388_1009117532	3300005332	Tropical Forest Soil	MKLGHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALCEALIASEGRLDP*
Ga0066388_1023472021	3300005332	Tropical Forest Soil	FRLTDGRSQLKPDHSLPTEGISRFRTAGWSLVLLAAQSQALDSQAAALQPDKEIYACCEALITSEGRSDP*
Ga0066388_1033841672	3300005332	Tropical Forest Soil	LKLHHSVPTEDPSGFRTALWSLVLLAAQSQAPDSQGRQLQADEGIHTRWEALIASEGRLGP*
Ga0066388_1065797591	3300005332	Tropical Forest Soil	DGKSQLKLDHSLPTERVGGFRTARWNLVFLAAQSQAPDSQATQLQADKEIHALCEALIAWEGWSDP*
Ga0066388_1079092632	3300005332	Tropical Forest Soil	MILSQLTDRRSHLKLHYSLPTEGASGFRTARRSLVLLAAQSQAPDSQATQLKVDDKIHALCEALIASEG
Ga0070709_116420761	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LKVDHSWPKDSAAGFRAAWWNLVLLAAKSQAPDSQAAPLQVDEEIHALCEALIASECRVGP*
Ga0070710_112684341	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	QLKLDHSLPTERAGGFRTAQWNLVFLAAQSEAPDSQATQLKADKEMHALCEALIAWEGRSDP*
Ga0070706_1000693103	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHSLPTDGAGGFRTARWNLVLLATQSQALDSQAAPLRVDEEIHALCEALIASEGL*
Ga0070706_1007808052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHSLPTERAGGFRTAQWNLVFLAAQSQAPDSQATQLKADKEIHALCEALIAWERRSDP*
Ga0070707_1009434531	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHNLATEGAGGFRAARWNMVLLEAEGQDPDSQATQLQADEEIRARYQTLIASEGRPD
Ga0070707_1011163741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHSLPTDGAGGFRTARWSFVLLATQSQAPGSQAAPLQVNEEIHALCEALIGSEERLIP*
Ga0070698_1006709631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHSLPTDGAGGFRTARWSFVLLATQSQAPGSQAAPLQVNEEIHALCEALI
Ga0070698_1009907362	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHRLPTERTGGFRTARWNLVFLAAQSQAPDSQATQLKADKEIHALCEALIAWEGRSDP*
Ga0070698_1018677662	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DGRSQLKLDHSWPIDGPGGFRTARWNLVLLAAQSQASDSQATPLQVGEEIHALCEALIASEGPLDP*
Ga0070697_1006960262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHNLATEGAGGFRAARWNMVLLEAEGQDPDSQATQLQADEEIRARYQTLIASEGRPDP*
Ga0066903_1000523442	3300005764	Tropical Forest Soil	MHVIVSRLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSQAPDSQAAPPQADEEIHAVCEALIAPEGRLDP*
Ga0066903_1019283252	3300005764	Tropical Forest Soil	LKLDHSLPMERAGGFRTAPWNLVFLAAQSQAPDSQATQLQADKEIHALCEALIAWEGRSDP*
Ga0066903_1031786592	3300005764	Tropical Forest Soil	LKLDHSLPTERAGGFRTARWNLVSLAAQSQAPDSQAAPLQADEEIHALCEALIASEGQLGL*
Ga0066903_1036576102	3300005764	Tropical Forest Soil	LADGRSQLKLDHSLPTEGAGGVHTARWTLPLLAAKSQGPDSQASPPQVDEEIHALCEALIASEGR*
Ga0066903_1038331321	3300005764	Tropical Forest Soil	LTDGRSQLKPDHSLPTEGGGGFRTARWSLLLLAVPSQAPDSQATPLQVDEGIHARCEALIASKGRLDP*
Ga0066903_1039670132	3300005764	Tropical Forest Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALGEALIASEGRLDP*
Ga0066903_1068130061	3300005764	Tropical Forest Soil	LTDGRSQLKLDHSLPTEGAGGFRTARWNLVFLAAQCQAPDSQATQLQADEGIRALCEALIASEGRSDP*
Ga0066903_1085198362	3300005764	Tropical Forest Soil	HVILSRLTDGRSQVKQHHSVPTDGASGFRTASRSLVLLAAQSQGPDSRTASLLADEEIHVFCEALIASDGRSDP*
Ga0070717_113462682	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LKLDHSLPTDGAGGFRTARWNLVFLAAQSQAPDSQATQLKADKEIHALCEALIAWERRSDP*
Ga0126384_113528001	3300010046	Tropical Forest Soil	MHVIVSRLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSLAPDSQAAPPQADEETHALCEALIAPEGRL
Ga0126384_120331872	3300010046	Tropical Forest Soil	HRDCAMGHRRQVMILSQLTDRRLHLKLHYRLPTEGASGFRTARRSLVLLAAQGQAPDSQPTQLEVDEEIHARREALFASERQPDP*
Ga0126373_111691762	3300010048	Tropical Forest Soil	MILSQLTDRRLHLKLHYRLPTEGASGFRTARRSLVLLSAQSQAPDSQATQLEVEEEIHARREALFASERQPDP*
Ga0074045_103522701	3300010341	Bog Forest Soil	VILSRLTDGRSQLKLDHSLPTDGAAGFRTARWNLVLLATQSQAPDSQAAPLQLEEEIHALCEALIASEGRLGL*
Ga0126370_122262631	3300010358	Tropical Forest Soil	SQLKLDHSLATKGADRFRTARWNLVLPAAHSRAPDFQTAPLQADKEIHPIFEALIASEGRSDP*
Ga0126377_122813161	3300010362	Tropical Forest Soil	TILRDGLFQTLLHVILSPLTDGRSQLRQHFRLPTDGTGGFYTARSNLVLPAAQSQGPLFRAVPLQAYEEIHALREALIASEGRVGS*
Ga0126379_105503932	3300010366	Tropical Forest Soil	MHVIVSRLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSQAPDSQAAPPQADEETHALCEALIAPEGRLDP*
Ga0126379_121437711	3300010366	Tropical Forest Soil	EGAGGFRTARRNLVLLAAQSQAPDSQAAPLQADEEILAHCGALIASEERSGL*
Ga0126381_1009611992	3300010376	Tropical Forest Soil	MKLDHSLPTEGAGGFRTARWSLVLLTAQSQAPSSQVAPLQADEGIRACCEGLIASEGRSDP*
Ga0126381_1019272581	3300010376	Tropical Forest Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALCEALIASEGRLDP*
Ga0126381_1045159272	3300010376	Tropical Forest Soil	LTDGRSQLKLDHSLPTEGAGGFRTARWDLFLVAPQSQTPDSQAALLQVDEEIHALCKALIASEEPADP*
Ga0126383_110355211	3300010398	Tropical Forest Soil	RRSHLKLHYRLPTEGASGFRTARRSLVLLSAQSQAPDSQATQLEVEEEIHARREALFASERQPDP*
Ga0126383_117927892	3300010398	Tropical Forest Soil	MHVIVSPLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSLAPDSQAAPPQADEEIHALCE
Ga0126369_109368491	3300012971	Tropical Forest Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQATQLKVDDKIHALCEALIASEGRLDP*
Ga0126369_128868492	3300012971	Tropical Forest Soil	MHVIVSPLTDGRAQLKLHHSLPTEGAGGFRTARWILLLLAAQSQAPDSQAAPPQADEEIHALCEALIAPEGRLDP*
Ga0164306_115234811	3300012988	Soil	LKLDHSWPKDSAAGFRAAWWNLVLLAAKSQAPDSQAAPLQVDEEIHALCEALIASECRVGP*
Ga0182036_110252171	3300016270	Soil	LKLDHSLPTEGTGGVRTARWNLVLLTAPSLAPDSQASPLQAGEEIHARCEAL
Ga0182041_103771941	3300016294	Soil	VIVSRLTDGRSQLKLDHSLATEGAGGFRAARRNLVFLAAQSQAPQLQANKEIHALCEALIPSEGR
Ga0182041_115779632	3300016294	Soil	LTDWRSQLKLDHSLATEGADGFRTARWNLVSLAAQSQAPDSQAALLQADQEIHALCEALIASEGQLGLCARSSNAPA
Ga0182041_123158172	3300016294	Soil	MKLDRCLPTEGTSGFRTAGRNFVFLAAQGQAPDSQAGPPQADEEIHAPREALIAS
Ga0182033_105156363	3300016319	Soil	MKLDHRLPTEGAGGFRTVLRNLVLLGAQSQAPDSQGAPLLAHEEIHAHCEALIASE
Ga0182035_118332682	3300016341	Soil	PTEGAGGFRTARWNLALLAAQSQARDFQAAPLRVDEEIHALCEALIASEERLGQ
Ga0182034_105087401	3300016371	Soil	LKLHHSLPTEGAGGFRTAGWDLVLPAAQGLAPDSEAAPRRADDKIHARCEALIASEGRSK
Ga0182034_106113614	3300016371	Soil	YVILSPLTDGSRKLKLHHSLATEGAGGFRAARRNLVFLAAQSQAPQLQANKEIHALCEALIPSEGR
Ga0182034_106289363	3300016371	Soil	LKLGHSLATEDAGGFRIARWSLALLAANSQGPGPDSRAAPLQADEEIHALCEALIPSEERSDP
Ga0182034_108599172	3300016371	Soil	LKFDNSLPTERAGGFLTGRRNLVLLAAQSQAPNCQAAPPQVDEEIHAQCEALIAS
Ga0182037_118495392	3300016404	Soil	LHVILSPLTDGRSQLKLHHSVPTDGAGGFRTARWYLALLAAQRQAPDFRVAPLQADDEIHALCEALIGSEGRLGP
Ga0182037_121034231	3300016404	Soil	LKLHHSLPTEGAGGFRTAGWDLVLPAAQGLAPDSEAAPRRADDKIHARCEALIASEGRSN
Ga0182039_105458083	3300016422	Soil	MKLDHRLPTEGAGGFRTARRNLVLLGAQSQAPDSQGAPLLAHEEIHAHCEALIASEGRL
Ga0182039_107218991	3300016422	Soil	GAGGFRTARWKLLLIAAQSQTPESQAAPRQADEEIHARCEALLASEGRSDP
Ga0182039_107575071	3300016422	Soil	LKLHYSLPTEDAGGFRTARWSLVLVAAQSHGPDSQATQLQVDEEIHARCEALIA
Ga0182038_101215811	3300016445	Soil	GGFRTARWKLLLIAAQSQTPESQAAPRQAHEEIHARCEALLASEGRSDP
Ga0182038_103997182	3300016445	Soil	MKLDHRLPTEGAGGFRTARRNLVLLGAQSHAPDSQGAPLLAHEEIHAHWEALIASEGRLG
Ga0126371_110263002	3300021560	Tropical Forest Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALCEALIASEGRLD
Ga0207692_104797142	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EHRGSQLKLDHSLPTERAGGFRTAQWNLVFLAAQSQAPDSQATQLKADKEIHALCQALIAWEGRSDP
Ga0207646_101016481	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QLKLDHSWPIDGPGGFRTARWNLVLLATQSLAPDSQAAPLRVDEEIHALCEALIASEGL
Ga0318541_104696902	3300031545	Soil	MKLDHRLPTEGAGGFRTARRNLVLLGAQSQAPDSQGAPLLAHEEIHAHCEALIASEGRLG
Ga0310915_104224453	3300031573	Soil	LKLDHSLPTEGAGGFRTARWSLVLLAVQSQTPDSQAAPPQVDEEIDALCEALIAPEGRSD
Ga0310915_105092481	3300031573	Soil	LELDHSLPTQGAGGVRTARRNFMLLASQSQAPDSQAAPLQADGEIHARCEAMIA
Ga0306917_103747592	3300031719	Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALGEALIACEGRLD
Ga0306917_104734291	3300031719	Soil	LKLRHSLPTGGTGGFRTARWSLVLLAAQSHAPESQAAPVQTDEEVHARCEALIA
Ga0306917_105616992	3300031719	Soil	MKLDHRLPTEGAGGFRTARRNLVLLGAQSQAPDSQGAPLLAHEEIHAHWEALIASEGRLG
Ga0306917_112131402	3300031719	Soil	MVDRREVTIEVDHSLPTESAGGFRTVRSKLVFLAAQSQAPDSQATQLQADKEIHALCEALIAWEGRSDP
Ga0318502_103471721	3300031747	Soil	MKLDHRLPTEGASGFRTARRNLVLLGAQSQAPDSQGAPLLAHEEIHAHCEALIASEGRLG
Ga0307475_113526692	3300031754	Hardwood Forest Soil	MAYSKLGLHVIVSRLTDGSSQLKLDHSLPTECAGGFRTVRWNLVLLAAQSQAPDSQSAPLQVDEEIHALCEALILLEGRSDP
Ga0318509_108207871	3300031768	Soil	LDHSLPTERADGFRTARWNLVFLAAQSQAPDSQAAQLQADKEIHALCEALIAWEGRSDP
Ga0318546_105143371	3300031771	Soil	LKLDHSLPTERAGGFRTARWNLVFLAAQSQAPDSQAAQLQADKEIHALCEAL
Ga0318529_102713301	3300031792	Soil	DHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALGEALIASEGRLDP
Ga0318564_104004902	3300031831	Soil	KLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALCEALIASEGRLDP
Ga0310917_107693092	3300031833	Soil	LKLHYSLPTEGASGFRTARRSLVLLAAQSQAPDSQATQLKVDEEIHALCEA
Ga0306919_100469972	3300031879	Soil	MKLDHSLPTEGASGFRTARRDLVLLGAQSQAPDSQAAPLLADDKIHALGEALIASEGRLD
Ga0306919_100663332	3300031879	Soil	MHVIVSRLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSQAPDSQAAPPQADEEIHAVCEALIAPEGRLDP
Ga0306919_109080462	3300031879	Soil	LKLAHSLPTERAGGFGTAPWNLVLLAAQSQAPDSQPAPLPADGEIHALCEALIASEW
Ga0306925_109436712	3300031890	Soil	LKLDHSLPTEGTGGFRTVRWSLILLAAQSQGRDSQSASLQADESIYALCEALIAPEGRL
Ga0306925_118586791	3300031890	Soil	LKLHHSLPTEDASGFRTARWSLVLLAAQSQTPDFQAAPLQADEEIHARCGALIGSE
Ga0318520_100343684	3300031897	Soil	MKLDHRLPTEGAGGFRTARRNLVLLGAQSHAPDSQGAPLLAHEEIHAHCEALIASEGRLG
Ga0318520_109376612	3300031897	Soil	LKLDHSLATEGADGFRTARWNLVSLAAQSQAPDSQAALLQADQEIHALCEALI
Ga0306921_100682796	3300031912	Soil	MHVIVSRLTDGRAQLKLHHSLPTEGAGGFRTARWNLLLLAAQSQAPDSQAAPPQADEEIHALCEALIAPEGRLDP
Ga0306921_123477201	3300031912	Soil	KLDHSLPTERAGGFRTARWTLVLVAAQSQAPDFEGTPQADEQIHALCEALIASEERLDP
Ga0310912_101542311	3300031941	Soil	YSLPTEDAGGFRTARWSLVLVAAQSHGPDSQATQLQVDEEIHARCEALIASEGRSDP
Ga0310912_107079092	3300031941	Soil	MKLDHRLPTEGAGGFRTVLRNLVLLGAQSQAPDSQGAPLLAHEEIHAHCEALIASEGRLG
Ga0310916_104511371	3300031942	Soil	TENAGRFRTARWNLGLLATQIQAPDSQPAPRQADEGIQARCEALIASEGRSDP
Ga0310916_116170342	3300031942	Soil	MQATYNQYNHRLHVILSPLTDGRSQLKLHHSLPTEGAGGFRTARWNLVLPAAQGLAPDSQAAPRQADEGIHASYKALIASEGRLGP
Ga0310913_112517381	3300031945	Soil	LKLHYSLPTEGASGFRTARRSLVLLAAQSQAPDSQATQLKVDEEIHALCEALIASERQPG
Ga0310910_105626554	3300031946	Soil	LTDGRSQLKLDHSLATEGAGGFRAARRNLVFLAAQSQAPQLQANKEIHALCEALIPSEGR
Ga0306926_112085492	3300031954	Soil	SQLTHGRSQLKLHYSLPTEDAGGFRTARWSLVLVAAQSHGPDSQATQLQVDEEIHARCEALIASEGRSDP
Ga0306926_124450431	3300031954	Soil	LKLDHSLPTEGAGGFRTARWNLLLLATQSQGPDPQAAPLQADEEIHALCEALI
Ga0306922_106983231	3300032001	Soil	EGAGGFRTARWTLVSLAARSRGPDSQAAPLQAGEEIHARCEALLGSEGGSDP
Ga0306922_108677153	3300032001	Soil	LKLDHSLPTEGAGGFRTARWSLVLLAVQSQTPDSQAAPPQVDEEIDALCEALIAPE
Ga0306922_113275511	3300032001	Soil	LHVILSSLTDRRSKLGLDHSLPTKGAGGFHTVRWNLVLLAAQSQAPDSQPEPLQADQEIHARCEALIASERAHDR
Ga0318505_103723541	3300032060	Soil	DRREVTMKLDHRLPTEGAGGFRTVLRNLVLLGAQSQAPDSQAAPLLADDKIHALGEALIASEGRLDP
Ga0306924_101230277	3300032076	Soil	LKLHHSLPTEGAGGFRTAGWDLVLPAAQGLAPDSEAAPRRADDKIHARCEALIA
Ga0306924_109192381	3300032076	Soil	LKLDHSLPTERADGFRTARWNLVFLAAQSQAPDSQAAQLQADKEIHALCEALIA
Ga0306924_115428041	3300032076	Soil	LKLDHSLATDGAGGFRTGRWSLVLLAAQSQGPDAQSAPLQVDEEIHALCEAMIAS
Ga0306920_1016062241	3300032261	Soil	LKLDHSLPTEGAGGFRTARRNLVLLAAQSQAPDFQAAPLQADEEIHPHCEALIASEERS
Ga0306920_1038087551	3300032261	Soil	LTDRRSKLGLDHSLPTKGAGGFHTVRWNLVLLAAQSQAPDSQPEPLQADQEIHARCEALIASERAHDR
Ga0306920_1039665662	3300032261	Soil	SLPTEGAGGFRTARRNLVLLGAQSQAPDSQATQLQADEEIHALCEALIASEERLGQ
Ga0310914_107367901	3300033289	Soil	LELDHSLPTQGAGGVRTARRNFMLLASQSQAPDSQAAPLQADGEIHARCEAMIVSEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096163

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences