Metagenome Family F096202

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Overview

Basic Information
Family ID	F096202
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	46 residues
Representative Sequence	MKINSENKQRIHDVLITDLQRRIFKQYNERKDEFNLTDEDYDVQ
Number of Associated Samples	73
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	94.29 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.810 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (61.905 % of family members)
Environment Ontology (ENVO)	Unclassified (96.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
All Organisms	root	All Organisms	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
cellular organisms	root	All Organisms → cellular organisms	9.52 %
Viruses	superkingdom	All Organisms → Viruses	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000928\|OpTDRAFT_10188391	All Organisms → Viruses → Predicted Viral	1231	Open in IMG/M
3300000973\|BBAY93_10114262	Not Available	684	Open in IMG/M
3300001450\|JGI24006J15134_10128207	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	864	Open in IMG/M
3300001450\|JGI24006J15134_10239946	Not Available	527	Open in IMG/M
3300006735\|Ga0098038_1137574	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	820	Open in IMG/M
3300006735\|Ga0098038_1163057	Not Available	737	Open in IMG/M
3300006751\|Ga0098040_1011838	All Organisms → Viruses → Predicted Viral	2980	Open in IMG/M
3300006752\|Ga0098048_1146002	Not Available	706	Open in IMG/M
3300006990\|Ga0098046_1042785	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300007962\|Ga0102907_1007871	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3224	Open in IMG/M
3300008050\|Ga0098052_1035503	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2237	Open in IMG/M
3300009074\|Ga0115549_1129713	Not Available	829	Open in IMG/M
3300010150\|Ga0098056_1146147	Not Available	799	Open in IMG/M
3300010151\|Ga0098061_1060195	Not Available	1464	Open in IMG/M
3300010153\|Ga0098059_1322531	Not Available	588	Open in IMG/M
3300011129\|Ga0151672_135477	Not Available	545	Open in IMG/M
3300017703\|Ga0181367_1041697	Not Available	816	Open in IMG/M
3300017706\|Ga0181377_1066388	Not Available	661	Open in IMG/M
3300017706\|Ga0181377_1085399	Not Available	557	Open in IMG/M
3300017706\|Ga0181377_1094005	Not Available	522	Open in IMG/M
3300017708\|Ga0181369_1037205	Not Available	1126	Open in IMG/M
3300017710\|Ga0181403_1134063	Not Available	517	Open in IMG/M
3300017713\|Ga0181391_1056602	Not Available	918	Open in IMG/M
3300017714\|Ga0181412_1160695	Not Available	502	Open in IMG/M
3300017717\|Ga0181404_1122539	Not Available	634	Open in IMG/M
3300017720\|Ga0181383_1157915	Not Available	608	Open in IMG/M
3300017720\|Ga0181383_1162124	Not Available	599	Open in IMG/M
3300017721\|Ga0181373_1068019	Not Available	637	Open in IMG/M
3300017724\|Ga0181388_1047877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1035	Open in IMG/M
3300017724\|Ga0181388_1113269	Not Available	645	Open in IMG/M
3300017724\|Ga0181388_1142949	Not Available	569	Open in IMG/M
3300017724\|Ga0181388_1164367	Not Available	526	Open in IMG/M
3300017725\|Ga0181398_1091111	Not Available	728	Open in IMG/M
3300017727\|Ga0181401_1106980	Not Available	707	Open in IMG/M
3300017728\|Ga0181419_1066654	Not Available	916	Open in IMG/M
3300017728\|Ga0181419_1075931	Not Available	845	Open in IMG/M
3300017728\|Ga0181419_1136432	Not Available	592	Open in IMG/M
3300017728\|Ga0181419_1138877	Not Available	586	Open in IMG/M
3300017729\|Ga0181396_1129438	Not Available	521	Open in IMG/M
3300017731\|Ga0181416_1120071	Not Available	631	Open in IMG/M
3300017732\|Ga0181415_1150345	Not Available	520	Open in IMG/M
3300017737\|Ga0187218_1068050	Not Available	872	Open in IMG/M
3300017737\|Ga0187218_1100889	Not Available	693	Open in IMG/M
3300017741\|Ga0181421_1133786	Not Available	642	Open in IMG/M
3300017742\|Ga0181399_1143956	Not Available	575	Open in IMG/M
3300017743\|Ga0181402_1148909	Not Available	593	Open in IMG/M
3300017744\|Ga0181397_1125650	Not Available	665	Open in IMG/M
3300017744\|Ga0181397_1152316	Not Available	591	Open in IMG/M
3300017745\|Ga0181427_1111653	Not Available	667	Open in IMG/M
3300017749\|Ga0181392_1100711	Not Available	863	Open in IMG/M
3300017750\|Ga0181405_1036150	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300017750\|Ga0181405_1129626	Not Available	628	Open in IMG/M
3300017750\|Ga0181405_1130965	Not Available	624	Open in IMG/M
3300017750\|Ga0181405_1185339	Not Available	507	Open in IMG/M
3300017751\|Ga0187219_1204165	Not Available	545	Open in IMG/M
3300017751\|Ga0187219_1216895	Not Available	524	Open in IMG/M
3300017752\|Ga0181400_1052543	Not Available	1260	Open in IMG/M
3300017752\|Ga0181400_1142391	Not Available	683	Open in IMG/M
3300017756\|Ga0181382_1144821	Not Available	622	Open in IMG/M
3300017758\|Ga0181409_1164826	Not Available	645	Open in IMG/M
3300017759\|Ga0181414_1151647	Not Available	606	Open in IMG/M
3300017760\|Ga0181408_1031111	All Organisms → Viruses → Predicted Viral	1459	Open in IMG/M
3300017760\|Ga0181408_1109869	Not Available	715	Open in IMG/M
3300017762\|Ga0181422_1195463	Not Available	611	Open in IMG/M
3300017762\|Ga0181422_1196333	Not Available	609	Open in IMG/M
3300017762\|Ga0181422_1207056	Not Available	589	Open in IMG/M
3300017762\|Ga0181422_1247734	Not Available	528	Open in IMG/M
3300017762\|Ga0181422_1252588	Not Available	521	Open in IMG/M
3300017762\|Ga0181422_1256393	Not Available	517	Open in IMG/M
3300017763\|Ga0181410_1030009	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1748	Open in IMG/M
3300017763\|Ga0181410_1185585	Not Available	574	Open in IMG/M
3300017767\|Ga0181406_1128724	Not Available	762	Open in IMG/M
3300017768\|Ga0187220_1202370	Not Available	598	Open in IMG/M
3300017770\|Ga0187217_1239344	Not Available	594	Open in IMG/M
3300017772\|Ga0181430_1174467	Not Available	619	Open in IMG/M
3300017773\|Ga0181386_1122790	Not Available	803	Open in IMG/M
3300017773\|Ga0181386_1127439	Not Available	785	Open in IMG/M
3300017775\|Ga0181432_1089782	Not Available	906	Open in IMG/M
3300017775\|Ga0181432_1153970	Not Available	708	Open in IMG/M
3300017775\|Ga0181432_1169622	Not Available	676	Open in IMG/M
3300017779\|Ga0181395_1040936	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1548	Open in IMG/M
3300017779\|Ga0181395_1056606	Not Available	1286	Open in IMG/M
3300017779\|Ga0181395_1226444	Not Available	576	Open in IMG/M
3300017781\|Ga0181423_1192931	Not Available	774	Open in IMG/M
3300017781\|Ga0181423_1322439	Not Available	566	Open in IMG/M
3300017786\|Ga0181424_10318027	Not Available	644	Open in IMG/M
3300020165\|Ga0206125_10375081	Not Available	521	Open in IMG/M
3300020311\|Ga0211628_1027268	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	974	Open in IMG/M
3300020352\|Ga0211505_1046318	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1073	Open in IMG/M
3300020376\|Ga0211682_10296883	Not Available	608	Open in IMG/M
3300020392\|Ga0211666_10041277	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2017	Open in IMG/M
3300020417\|Ga0211528_10176123	Not Available	830	Open in IMG/M
3300020438\|Ga0211576_10177544	Not Available	1142	Open in IMG/M
3300020449\|Ga0211642_10490737	Not Available	527	Open in IMG/M
3300020469\|Ga0211577_10107040	All Organisms → Viruses → Predicted Viral	1933	Open in IMG/M
3300020471\|Ga0211614_10527033	Not Available	524	Open in IMG/M
3300020595\|Ga0206126_10428822	Not Available	578	Open in IMG/M
3300021365\|Ga0206123_10062537	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
3300025168\|Ga0209337_1083843	Not Available	1534	Open in IMG/M
3300025806\|Ga0208545_1102349	Not Available	747	Open in IMG/M
3300025892\|Ga0209630_10496055	Not Available	506	Open in IMG/M
3300027672\|Ga0209383_1019182	Not Available	2978	Open in IMG/M
3300028022\|Ga0256382_1078647	Not Available	785	Open in IMG/M
3300029319\|Ga0183748_1044933	Not Available	1297	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.05%
Algae	Host-Associated → Algae	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Green Algae	Host-Associated → Algae → Green Algae	0.95%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	61.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	17.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.48%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.76%
Coastal	Environmental → Aquatic → Marine → Coastal	1.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	61.90%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	17.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.90%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.95%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	61.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	17.14%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.48%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.81%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.95%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.95%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.95%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.95%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.95%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300011129	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020311	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX556071-ERR599171)	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OpTDRAFT_101883914	3300000928	Freshwater And Marine	MKINSENKQRIHDVLISDLQRRLFKQYNERTSEFIVTDEDYNTQQTLLVD
BBAY93_101142623	3300000973	Macroalgal Surface	MNINSENKQRIHDVLITDLQRRIFKQYNERTNEFIVTDEDYDTQQTLLVDRVLNV
JGI24006J15134_101282071	3300001450	Marine	MKISITNKQRIHDVLISDLQRRLFKQYNERTSEFIVTD
JGI24006J15134_102399461	3300001450	Marine	MKIAIENKQRIHDVLISDLQRRLYKQYNERTSEFIVTD
Ga0098038_11375744	3300006735	Marine	MNINESNKQRIHDVLITDLQRRIFKQYNERTSEFL
Ga0098038_11630571	3300006735	Marine	MNINKTNKQAIHNVLITDLQRRIFKQYNQRKDEFNLTDEDYDVTQTLLVDKVLH
Ga0098040_10118388	3300006751	Marine	MKISITHKQRIHDVLLSDIQRRLFKQYNARKDEFNITDEDYDVQQT
Ga0098048_11460021	3300006752	Marine	MKITIGNKQRIHDVLLSDIQRRLFKQYNERKNEFNIT
Ga0098046_10427851	3300006990	Marine	MKINSENKQRIHDVLLTDMQRRIFKQYNARKDEFNLTDEDYDVQQTLLVDSV
Ga0102907_10078711	3300007962	Estuarine	MKIAIENKQRIHDVLLSDMQSRIFKQYNERKDEFNLTDEDYDTQQTILVDWV
Ga0098052_10355036	3300008050	Marine	MKISITHKQRIHDVLLSDIQRRLFKQYNQRKDEFNVTDEDYDVQQTLLVDSVL
Ga0115549_11297133	3300009074	Pelagic Marine	MKINSENKQRIHDVLLTDLQRRIFKQYNQRKDEFNLTDEDY
Ga0098056_11461474	3300010150	Marine	MKINKTNITHIHDLLITNIQRRLFKQYNARKDEFNITD
Ga0098061_10601951	3300010151	Marine	MAIDKQNKQAIHDALITDMQRRIFKQYNARKDEFNITDEDYDVQQTLLVDS
Ga0098059_13225311	3300010153	Marine	MKIAIENKQRIHDVLITDLQRRIFKQYNERKDEFNLTDED
Ga0151672_1354772	3300011129	Marine	MKIAIKNKQRIHDVLLSDLQRRLFKQYNARTSEFIVTDEDYDQHQTL*
Ga0181367_10416973	3300017703	Marine	MAIDKQNKQAIHDALITDMQRRLFKQYNARKDEFNITDEDYDVTQTLLVDKVL
Ga0181377_10663881	3300017706	Marine	MKINSENKQRIHDVLITDLQRRIFKQYNARKDEFKLT
Ga0181377_10853993	3300017706	Marine	MKINIENKQRIHDVLLSDLQRRLFKQYNERTSEFIVTDEDYDQQQ
Ga0181377_10940051	3300017706	Marine	MNIDKTNKQAVHDALITDLQRLLFKQYNARKDEFKLTDV
Ga0181369_10372051	3300017708	Marine	MKINIENKQRIHDVLLTDMQRRIFKQYNQRKDEFNLTDEDYDVQQTLLVDSV
Ga0181403_11340631	3300017710	Seawater	MKINSENKQLIHDVLITDLQRRIFKQYNERKDEFNLTDEDYDV
Ga0181391_10566023	3300017713	Seawater	MKINSENKQRIHDVLLTDLQRRIFKQYNERKDEFNITDEDYDVTQTLLVDSVLHCETF
Ga0181412_11606952	3300017714	Seawater	MKINIENKQRIHDVLLSDMQRRIFKQYNERKEEFNLTDEDYDTQQTI
Ga0181404_11225394	3300017717	Seawater	MKINSENKQRIHDVLITDLQRRIFKQYNERKDEFNITDEDYDVQQTLLVD
Ga0181383_11579151	3300017720	Seawater	MKINSENKQRIHDVLLSDLQRRLFKQYNERTDMFNPT
Ga0181383_11621242	3300017720	Seawater	MRISITNKQRIHDVLISDLQRRIFKQYNERKDEFNIT
Ga0181373_10680192	3300017721	Marine	MKIAIENKQRIHDVLLTDLQRRIFKQYNARKDEFKLTDEDYDVQQTLLVDSVLHC
Ga0181388_10478774	3300017724	Seawater	MKIAIENKQRIHDVLISDLQRRLFKQYNTRTDEFNITDEDYDNQNTVL
Ga0181388_11132694	3300017724	Seawater	MKINSENKQRIHDVLITDLQRRIFKQYNERKDEFNLTDEDYDVQ
Ga0181388_11429491	3300017724	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPTDEDYDVQQTLLVDS
Ga0181388_11643672	3300017724	Seawater	MKISITNKQAIHDALITDLQRRLFKQYNERTSEFIVTDEDYDTQ
Ga0181398_10911113	3300017725	Seawater	MKINTANITHIHDLLISDLQRRLFRQYNQRKDEFNI
Ga0181401_11069801	3300017727	Seawater	MKINSENKQRIHDVLISDLQRRIFKQYNERKDEFN
Ga0181419_10666544	3300017728	Seawater	MKINSENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPTDEDYDVQQ
Ga0181419_10759311	3300017728	Seawater	MKINTTNINRIHDVLITDIQRLLFKQYNERKNEFNITDEDYDTQQTMLVDSILHTNTIS
Ga0181419_11364323	3300017728	Seawater	MKIAIENKQRIHDVLLSDMQRRIFKQYNERKDEFNITDEDYDTQQTMLVDSILHTN
Ga0181419_11388771	3300017728	Seawater	MKINIENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPTDEDYDVQQ
Ga0181396_11294381	3300017729	Seawater	MKINSENKQRIHDVLISDLQRRIFKQYNERKDEFNLTDEDYDVQQTLLVDSVLH
Ga0181416_11200713	3300017731	Seawater	MNIDKTNKQAVHDVLLTDLQKRIFKQYNARKDTFNLTDEDYDNIQTMLVD
Ga0181415_11503452	3300017732	Seawater	MKISITNKQAIHDALITDLQRRLFKQYNERTSEFIVTDEDYDQQQ
Ga0187218_10680504	3300017737	Seawater	MKINIENKQRIHDVLISDLQRRLFKQYNARTDMFNPSDED
Ga0187218_11008891	3300017737	Seawater	MKIAIENKQRIHDVLISDLQRRLFKQYNSRTDMFNPTDEDYDVQQT
Ga0181421_11337863	3300017741	Seawater	MKIAIENKQRIHDVLITDMQRRIFKQYNQRKDEFNLTDEDYDVQQ
Ga0181399_11439561	3300017742	Seawater	MKISIENKQRIHDVLLTDLQRRIFKQYNERKDEFNLTDEDYDTQQTILVDWVLKGVKLNDLKD
Ga0181402_11489092	3300017743	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNERTDMINTTDEDYDVQQR
Ga0181397_11256501	3300017744	Seawater	MKIAIENKQRIHDVLLSDMQRRIFKQYNERKDEFNITDED
Ga0181397_11523162	3300017744	Seawater	MEINETNKQAIHDVLLTDLQKRIFKQYNARKDTFNLTDEDYDNIQTMLV
Ga0181427_11103863	3300017745	Seawater	MKINSENKQRIHDVLLTDMQRRIFKQYNERKDEFNLTDEDYDTQQTILVDWVLQCDT
Ga0181427_11116531	3300017745	Seawater	MKISITNKQAIHDALITDLQRRLFKQYNERTSEFIVTDED
Ga0181392_11007114	3300017749	Seawater	MRISITNKQRIHDVLISDLQRRIFKQYNERKDEFNLTDEDYNVQQTLLVDSVLHCE
Ga0181405_10361505	3300017750	Seawater	MKINTTNINRIHDVLITDIQRLMFKQYNERKNEFNITDEDYDTQNTLLYSEVHKCN
Ga0181405_11296263	3300017750	Seawater	MKIAIENKQRIHDVLITDMQRRIFKQYNQRKDEFNLTDEDY
Ga0181405_11309651	3300017750	Seawater	MKINIENKQRIHDVLLTDMQRRIFKQYNARKEEFNLTDEDYDVQQTLLVDSVLH
Ga0181405_11853391	3300017750	Seawater	MKINSENKQRIHDVLITDLQRRIFKQYNERKDEFNITDEDYDVQQTLLVDSVLHCET
Ga0187219_12041652	3300017751	Seawater	MKINSENKQRIHDVLLSDMQRRIFKQYNERKDEFKLTDEDYDVQQ
Ga0187219_12168951	3300017751	Seawater	MKIAIENKQRIHDVLITDIQRLLFKQYNEMKVRFNVTDEDYD
Ga0181400_10525436	3300017752	Seawater	MKIAIENKQRIHDVLITDIQRLLFKQYNEMKVRFNVT
Ga0181400_11423913	3300017752	Seawater	MRISITNKQRIHDVLISDLQRRIFKQYNERKDEFNLTDEDYNV
Ga0181382_11448213	3300017756	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNERTDVFNPTDEDYDVQQTLLVDSVL
Ga0181409_11648263	3300017758	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPTDEDYDVQQ
Ga0181414_11516471	3300017759	Seawater	MKINSENKQRIHDVLLSDLQRRIFKQYNERTSEFLRTDEDY
Ga0181408_10311116	3300017760	Seawater	MKINTTNINRIHDVLITDIQRLLFKQYNEMKVRFNVTDEDYDNQNT
Ga0181408_11098693	3300017760	Seawater	MKISITNKQRIHDVLLTDLQRRLFKQYNSRTNEFIATDEDYDVQ
Ga0181422_11954631	3300017762	Seawater	MKINSENKQRIHDVLITDLQRLLFRNYNARKEEFNMNDDDYDNAMS
Ga0181422_11963332	3300017762	Seawater	MEINKTNKQAIHNVLYTDLQRLLFKQYNERKNEFNITDEDYDTQNTLLYSEVHKCNTL
Ga0181422_12070563	3300017762	Seawater	MKIAIENKQRIHDVLLSDMQRRIFKQYNQRKDEFNI
Ga0181422_12477341	3300017762	Seawater	MKINSENKQRIHDVLISDLQRRIFKQYNERKDEFNLTDEDYDVQQTL
Ga0181422_12525881	3300017762	Seawater	MKITIENKQRIHDVLLTDMQRRIFKQYNARKEEFNLTDEDYDVQQTLLVDSVLHCETLND
Ga0181422_12563933	3300017762	Seawater	MKINTANITHIHDLLITDIQRRLFRQYNARKDEFNITDED
Ga0181410_10300095	3300017763	Seawater	MNINSENKQRIHDVLLSDLQRRLFKQYNTRTEFFLQNKRTDEDYDVQQTLLVD
Ga0181410_11855851	3300017763	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPSDEDYDVQQTLLVDS
Ga0181406_11287244	3300017767	Seawater	MKINIENKQRIHDVLLTDMQRRIYKQYNERKEEFNLTDEDYDTQQTILVDWVLQCD
Ga0187220_12023703	3300017768	Seawater	MKITIENKQRIHDVLITDMQRRIFKQYNQRKDEFNLTDEDYDVQQTL
Ga0187217_12393443	3300017770	Seawater	MKINIENKQRIHDVLLSDMQRRIYKQYNERKEEFNLTD
Ga0181430_11744671	3300017772	Seawater	MKINSENKQRIHDVLITDIQRLLFKQYNEMKVRFNVTD
Ga0181386_11227904	3300017773	Seawater	MKIAIENKQRIHDVLLSDMQRRIYKQYNERKEEFNLTDEDYDTQQ
Ga0181386_11274393	3300017773	Seawater	MNINSENKQRIHDVLISDLQRRIFKQYNARKDEFNLTDEDYDVQ
Ga0181432_10897824	3300017775	Seawater	MNLNHTNKQAIHDALITDMQRRLFKQYNERSDEFTSALMNDEDYDVAQT
Ga0181432_11539703	3300017775	Seawater	MNINHTNKQAIHELLITDLQRRLFKQYNERSDEFT
Ga0181432_11696221	3300017775	Seawater	MNLNHTNKQAIHDALITDMQRRLFKQYNERSDEFTSALMNDEDYDVAQTL
Ga0181395_10409361	3300017779	Seawater	MKIAIENKQRIHDVLLSDMQRRIYKQYNERKEEFNLTDEDYDTQQTILVDWVLQCD
Ga0181395_10566066	3300017779	Seawater	MKINSENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPTDEDYDVQQTLLVDSVLHCE
Ga0181395_12264443	3300017779	Seawater	MKIAIENKQRIHDVLLSDLQRRLFKQYNSRTDMFNPSDEDYDVQQTLLVDSVL
Ga0181423_11929315	3300017781	Seawater	MKINSENKQRIHDVLITDLQRRIFKQYNERKNEFSITDEDY
Ga0181423_13224393	3300017781	Seawater	MEINKQNKQAVHDVLLTDLQKRIFKQYNARKDTFNLTD
Ga0181424_103180273	3300017786	Seawater	MKINIENKQRIHDVLISDLQRRIFKQYNQRKDEFNITDEDYDVQQ
Ga0206125_103750812	3300020165	Seawater	MKINSENKQRIHDVLLTDLQRRIFKQYNARKDEFNLTDEDYDTQQTLL
Ga0211628_10272681	3300020311	Marine	MKLLSENKQRIHDVLLTDLQRRIFKQYNARKDEFNLTDEDYDVQQTLLVDSV
Ga0211505_10463181	3300020352	Marine	MKINTTNINRVHDVLITDIQRLLFKQYNEMKVRFNVTDEDYDTQNTL
Ga0211682_102968832	3300020376	Marine	MNINETNKQAIHDALITDLQRRLFKQYNSRTSEFI
Ga0211666_100412776	3300020392	Marine	MNINSENKQRIHDVLITDLQRRIFKQYNARTNEFLQTDEDY
Ga0211528_101761231	3300020417	Marine	MKINIENKQRIHDMLITDIQRRLFKQYNARKDEFNIT
Ga0211576_101775444	3300020438	Marine	MKINSENKQRIHDVLLTDLQRRIFKQYNERKDEFNITDEDYDVTQTL
Ga0211642_104907371	3300020449	Marine	MNINHTNKQAIHDALIIDMQRRLFKQYNERTDEFNGNITDEDYDVAQTLLIDKI
Ga0211577_101070406	3300020469	Marine	MKINSENKQRIHDVLLSDLQRRLFKQYNERTDMFNPTDEDYDVQQTLLVDSVLH
Ga0211614_105270331	3300020471	Marine	MKINESNKQRIHDVLITDLQRRIFKQYNERTNEFIQTDEDYDTTQ
Ga0206126_104288223	3300020595	Seawater	MKINHKNKQAIHDVLITDLQRRLFKQYNERTNEFI
Ga0206123_100625376	3300021365	Seawater	MKINSENKQRIHDVLLTDLQRRIFKQYNQRKDEFNL
Ga0209337_10838431	3300025168	Marine	MKINATNINRIHDVLITDIQRLLFKQYNEMKVRFNVT
Ga0208545_11023491	3300025806	Aqueous	MKINSENKQRIHDVLITDLQRRLFKQYNERTSEFIVTDEDYDQQQT
Ga0209630_104960552	3300025892	Pelagic Marine	MNIDKTNQQAIHNVLLTDLQKRIFKQYNQRKDKFNLTDEDYDVIQTLLVDKVLHCN
Ga0209383_10191821	3300027672	Marine	MKISITHKQRIHDMLLTDIQRRLFKQYNARKDEFITDEDYDTQN
Ga0256382_10786473	3300028022	Seawater	MNIDKTNKQAIHNVLLTDLQKRIFKQYNARKDKFNLTD
Ga0183748_10449331	3300029319	Marine	MKINIENKQRIHDVLISDLQRRIFKQYNARTNEFIQTDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences