Metagenome / Metatranscriptome Family F096267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	50 residues
Representative Sequence	RVLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNALL
Number of Associated Samples	66
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.57 %
% of genes near scaffold ends (potentially truncated)	75.24 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (60.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (39.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13401	AAA_22	8.57
PF01136	Peptidase_U32	3.81
PF04014	MazE_antitoxin	3.81
PF13847	Methyltransf_31	2.86
PF14306	PUA_2	2.86
PF01053	Cys_Met_Meta_PP	2.86
PF04358	DsrC	1.90
PF00108	Thiolase_N	1.90
PF00155	Aminotran_1_2	1.90
PF00005	ABC_tran	1.90
PF01850	PIN	1.90
PF13541	ChlI	1.90
PF02915	Rubrerythrin	1.90
PF02800	Gp_dh_C	1.90
PF17032	zinc_ribbon_15	1.90
PF13599	Pentapeptide_4	1.90
PF13502	AsmA_2	1.90
PF00583	Acetyltransf_1	0.95
PF13183	Fer4_8	0.95
PF01975	SurE	0.95
PF07228	SpoIIE	0.95
PF02470	MlaD	0.95
PF01416	PseudoU_synth_1	0.95
PF13589	HATPase_c_3	0.95
PF00805	Pentapeptide	0.95
PF02801	Ketoacyl-synt_C	0.95
PF00908	dTDP_sugar_isom	0.95
PF13701	DDE_Tnp_1_4	0.95
PF07075	DUF1343	0.95
PF07238	PilZ	0.95
PF00266	Aminotran_5	0.95
PF01909	NTP_transf_2	0.95
PF12727	PBP_like	0.95
PF04391	DUF533	0.95
PF00528	BPD_transp_1	0.95
PF00313	CSD	0.95
PF00004	AAA	0.95
PF02417	Chromate_transp	0.95
PF13607	Succ_CoA_lig	0.95
PF02875	Mur_ligase_C	0.95
PF04551	GcpE	0.95
PF12838	Fer4_7	0.95
PF13291	ACT_4	0.95
PF03773	ArsP_1	0.95
PF04545	Sigma70_r4	0.95
PF01257	2Fe-2S_thioredx	0.95
PF01170	UPF0020	0.95
PF04892	VanZ	0.95
PF00459	Inositol_P	0.95
PF00795	CN_hydrolase	0.95
PF01121	CoaE	0.95
PF03308	MeaB	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	3.81
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	2.86
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	2.86
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	2.86
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	2.86
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	2.86
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	2.86
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	2.86
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	2.86
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	2.86
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	2.86
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	2.86
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.90
COG2920	Sulfur transfer complex TusBCD TusE component, DsrC family (tRNA 2-thiouridine synthesizing protein C)	Translation, ribosomal structure and biogenesis [J]	1.90
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	1.90
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.95
COG0286	Type I restriction-modification system, DNA methylase subunit	Defense mechanisms [V]	0.95
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.95
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.95
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.95
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.95
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.95
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.95
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1905	NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)	Energy production and conversion [C]	0.95
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.95
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.95
COG2263	Predicted RNA methylase	General function prediction only [R]	0.95
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.95
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.95
COG2813	16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG	Translation, ribosomal structure and biogenesis [J]	0.95
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.95
COG2979	Uncharacterized membrane protein YebE, DUF533 family	Function unknown [S]	0.95
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.95
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.95
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.95
COG0116	23S rRNA G2445 N2-methylase RlmL	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.71 %
Unclassified	root	N/A	28.57 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.90 %
Unclassified	root	N/A	28.57 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	5.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.86 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.95 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	40.95 %
Unclassified	root	N/A	28.57 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	5.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.86 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	40.95 %
Unclassified	root	N/A	28.57 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	5.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.86 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	13.33 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	5.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.81 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	3.81 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.86 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.95 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.95 %
Desulfarculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	12.38 %
unclassified Methanosarcinales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales	4.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.86 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	1.90 %
Alkalispirochaeta	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta	0.95 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.95 %
unclassified Syntrophobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales	0.95 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.95 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.95 %
Desulfarculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	7.62 %
Methanosarcinales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	4.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	2.86 %
unclassified Syntrophobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae	1.90 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	0.95 %
Dethiosulfatarculus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Dethiosulfatarculus	0.95 %
Desulforhopalus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulforhopalus	0.95 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	0.95 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.95 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	7.62 %
Methanosarcinales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	4.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.86 %
Syntrophobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	1.90 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	0.95 %
unclassified Desulforhopalus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulforhopalus → unclassified Desulforhopalus	0.95 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	0.95 %
Dethiosulfatarculus sandiegensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Dethiosulfatarculus → Dethiosulfatarculus sandiegensis	0.95 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	0.95 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	7.62 %
Methanosarcinales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	4.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.86 %
Syntrophobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	1.90 %
Syntrophus sp. PtaU1.Bin208	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaU1.Bin208	0.95 %
Desulforhopalus sp. IMCC35007	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulforhopalus → unclassified Desulforhopalus → Desulforhopalus sp. IMCC35007	0.95 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	0.95 %
Dethiosulfatarculus sandiegensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Dethiosulfatarculus → Dethiosulfatarculus sandiegensis	0.95 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	0.95 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000094\|WSSedA1TDRAFT_c006389	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1039388	Not Available	960	Open in IMG/M
3300000316\|WSSedB2CaDRAFT_1019973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	602	Open in IMG/M
3300000786\|WSSedA2C2DRAFT_1008510	Not Available	877	Open in IMG/M
3300000792\|BS_KBA_SWE02_21mDRAFT_10035448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1499	Open in IMG/M
3300000917\|WSSedA2C3DRAFT_1032751	Not Available	731	Open in IMG/M
3300001279\|JGI20214J14112_1008961	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300001279\|JGI20214J14112_1043214	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300001373\|YBMDRAFT_10115079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	813	Open in IMG/M
3300003432\|JGI20214J51088_10745931	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300003541\|JGI20214J51650_10505102	Not Available	848	Open in IMG/M
3300004057\|Ga0055496_10111048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	659	Open in IMG/M
3300005204\|Ga0068997_10149310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	537	Open in IMG/M
3300005218\|Ga0068996_10002104	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300005219\|Ga0069004_10252441	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	546	Open in IMG/M
3300006930\|Ga0079303_10168434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	864	Open in IMG/M
3300009009\|Ga0105105_10514947	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009037\|Ga0105093_10008141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4186	Open in IMG/M
3300009037\|Ga0105093_10008161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4181	Open in IMG/M
3300009037\|Ga0105093_10033565	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	2242	Open in IMG/M
3300009075\|Ga0105090_10407058	Not Available	829	Open in IMG/M
3300009075\|Ga0105090_10717163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	607	Open in IMG/M
3300009081\|Ga0105098_10140555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300009081\|Ga0105098_10464022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	639	Open in IMG/M
3300009082\|Ga0105099_10093470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1642	Open in IMG/M
3300009085\|Ga0105103_10039170	Not Available	2374	Open in IMG/M
3300009146\|Ga0105091_10095420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaU1.Bin208	1358	Open in IMG/M
3300009165\|Ga0105102_10129398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1213	Open in IMG/M
3300009165\|Ga0105102_10356699	Not Available	769	Open in IMG/M
3300009169\|Ga0105097_10098245	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1599	Open in IMG/M
3300009179\|Ga0115028_11705920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	544	Open in IMG/M
3300014308\|Ga0075354_1111243	Not Available	585	Open in IMG/M
3300019229\|Ga0180116_1293250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	745	Open in IMG/M
3300024056\|Ga0124853_1508556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2300	Open in IMG/M
3300025958\|Ga0210069_1046211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300025985\|Ga0210117_1001924	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300026357\|Ga0256810_1013390	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300027675\|Ga0209077_1148420	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027683\|Ga0209392_1023781	Not Available	1966	Open in IMG/M
3300027693\|Ga0209704_1107176	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	797	Open in IMG/M
3300027693\|Ga0209704_1201759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	580	Open in IMG/M
3300027716\|Ga0209682_10182518	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300027721\|Ga0209492_1025792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2031	Open in IMG/M
3300027721\|Ga0209492_1172922	Not Available	748	Open in IMG/M
3300027726\|Ga0209285_10059678	Not Available	1137	Open in IMG/M
3300027726\|Ga0209285_10071677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1040	Open in IMG/M
3300027739\|Ga0209575_10047142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1569	Open in IMG/M
3300027739\|Ga0209575_10296633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	558	Open in IMG/M
3300027796\|Ga0209373_10196253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	860	Open in IMG/M
3300027841\|Ga0209262_10027078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Dethiosulfatarculus → Dethiosulfatarculus sandiegensis	2477	Open in IMG/M
3300027871\|Ga0209397_10246235	Not Available	839	Open in IMG/M
3300027885\|Ga0209450_10058394	Not Available	2417	Open in IMG/M
3300027885\|Ga0209450_10096952	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1946	Open in IMG/M
3300027885\|Ga0209450_10505485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	884	Open in IMG/M
3300027885\|Ga0209450_10594476	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300027887\|Ga0208980_10430067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	760	Open in IMG/M
3300027899\|Ga0209668_10159257	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300027899\|Ga0209668_10160873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1370	Open in IMG/M
3300027899\|Ga0209668_10565309	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	758	Open in IMG/M
3300027956\|Ga0209820_1051668	Not Available	1087	Open in IMG/M
3300027972\|Ga0209079_10349559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	500	Open in IMG/M
3300027975\|Ga0209391_10032482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2575	Open in IMG/M
3300027975\|Ga0209391_10197613	Not Available	836	Open in IMG/M
3300031834\|Ga0315290_10170937	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300031834\|Ga0315290_10447779	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	1130	Open in IMG/M
3300031834\|Ga0315290_10558409	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300031834\|Ga0315290_11108817	Not Available	661	Open in IMG/M
3300031834\|Ga0315290_11593800	Not Available	527	Open in IMG/M
3300031949\|Ga0214473_10650111	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031949\|Ga0214473_11474620	Not Available	688	Open in IMG/M
3300031997\|Ga0315278_10987634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	839	Open in IMG/M
3300032143\|Ga0315292_10060159	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	2850	Open in IMG/M
3300032143\|Ga0315292_10939420	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032156\|Ga0315295_10734376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	994	Open in IMG/M
3300032156\|Ga0315295_11367660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	687	Open in IMG/M
3300032156\|Ga0315295_11943303	Not Available	554	Open in IMG/M
3300032164\|Ga0315283_10135485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2616	Open in IMG/M
3300032173\|Ga0315268_10304964	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300032173\|Ga0315268_10532121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1161	Open in IMG/M
3300032177\|Ga0315276_10422721	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300032177\|Ga0315276_10535848	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	1258	Open in IMG/M
3300032177\|Ga0315276_10962891	Not Available	908	Open in IMG/M
3300032177\|Ga0315276_11736116	Not Available	643	Open in IMG/M
3300032177\|Ga0315276_12391416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	531	Open in IMG/M
3300032256\|Ga0315271_10772874	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	827	Open in IMG/M
3300032397\|Ga0315287_10068845	All Organisms → cellular organisms → Bacteria	3943	Open in IMG/M
3300032397\|Ga0315287_10768477	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300032397\|Ga0315287_10841929	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300032397\|Ga0315287_12814061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300032401\|Ga0315275_10905660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	973	Open in IMG/M
3300032401\|Ga0315275_11078567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	879	Open in IMG/M
3300032401\|Ga0315275_11896212	Not Available	630	Open in IMG/M
3300032401\|Ga0315275_12294625	Not Available	562	Open in IMG/M
3300033414\|Ga0316619_10460674	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300033418\|Ga0316625_100119300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1546	Open in IMG/M
3300033418\|Ga0316625_102177915	Not Available	551	Open in IMG/M
3300033419\|Ga0316601_101837605	Not Available	611	Open in IMG/M
3300033482\|Ga0316627_101305173	Not Available	724	Open in IMG/M
3300033483\|Ga0316629_10384798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300033521\|Ga0316616_101988653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	769	Open in IMG/M
3300033557\|Ga0316617_100438970	Not Available	1165	Open in IMG/M
3300033557\|Ga0316617_102715939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulforhopalus → unclassified Desulforhopalus → Desulforhopalus sp. IMCC35007	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	86.67%
Terrestrial	Environmental → Terrestrial	13.33%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	69.52%
Marine	Environmental → Aquatic → Marine	17.14%
Soil	Environmental → Terrestrial → Soil	12.38%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.95%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	29.52%
Lake	Environmental → Aquatic → Freshwater → Lake	26.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	15.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.67%
Pond	Environmental → Aquatic → Freshwater → Pond	3.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	29.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	26.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.48%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	9.52%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.90%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	1.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	26.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	26.67%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	9.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.52%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.71%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.81%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.95%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000094	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Tule	Environmental	Open in IMG/M
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300000316	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface Sediment Feb2011 Site B2 Cattail	Environmental	Open in IMG/M
3300000786	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 Cattail	Environmental	Open in IMG/M
3300000792	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 02_21m	Environmental	Open in IMG/M
3300000917	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 Cattail	Environmental	Open in IMG/M
3300001279	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300001373	YB-Mouth-sed	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025958	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026357	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU5	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1TDRAFT_0063893	3300000094	Wetland	LKNKHHAVSQGARRFGKRSPPAADEHLQKPCNAGSRREALFFNNLFMHSFT*
WSSedA1Ba3DRAFT_10393882	3300000311	Wetland	LKNKHHAVSQGARRFGKRSPPAADGHLQKPCNTGSRREALFFNNLFMHSFT*
WSSedB2CaDRAFT_10199732	3300000316	Wetland	VLKNKHQVVSQGVRRFGKRSIFKICEHLQKPHNARSRREARFSNIL
WSSedA2C2DRAFT_10085102	3300000786	Wetland	SRVLKNKHQAVSQGVRRFEKRSIFLICEHLQKPYTAGSRPQVRFFNILLK*
BS_KBA_SWE02_21mDRAFT_100354481	3300000792	Marine	MNRVLKNEHQAVSQGVRRFGKRSILTMIPEHLQKPHNAGSRPQVQFFST
WSSedA2C3DRAFT_10327512	3300000917	Wetland	MWRLLPGPGYNRLLKNKHHAVSQGARRFGKRSPPAADEHLQKPCNAGSRREALFFNNLFMHSFT*
JGI20214J14112_10089611	3300001279	Wetland	VLKNKHQAVSQGVRRFGKRSIFIICEQLQKPHNTGSRPQARFFNTLSDDV
JGI20214J14112_10432142	3300001279	Wetland	IRVLKNKHQAVSQGVRRFGKRSIFIIYEQLQKPHNAGSRPAARFFNTLLYS*
YBMDRAFT_101150791	3300001373	Marine Estuarine	VLKNKHQAVSQGVQRFGKRSLFIICEHLQKPHNAGSRREARFCNT
JGI20214J51088_107459311	3300003432	Wetland	LLKNKHQAVSQGARRFGKRSILLICEHLQTPRNAGSRPKAPFFYSLLCDPV*
JGI20214J51650_105051022	3300003541	Wetland	WRLLPGPGYNRLLKNRHQAASQGARRFGKRSIFTICEHLQKPCNAGSRREALFFNNLFMHSFT*
Ga0055496_101110481	3300004057	Natural And Restored Wetlands	NKHPAVSQGVRRFGKRSIFIICEHLQKLHNAGSRREARFFTILLIYIRDP*
Ga0068997_101493101	3300005204	Natural And Restored Wetlands	AVSQGVRRFGKRSIFTICEHLRKPHNTGSRPEAQLFNTLLEGFFGSINVD*
Ga0068996_100021042	3300005218	Natural And Restored Wetlands	MFHRLSKNKTQAVSQGARRFGKRSIFIICEHLQKPGNAGSRLEAQFFNSLPGGEDVKK*
Ga0069004_102524411	3300005219	Natural And Restored Wetlands	KNKHQAVSQGVRRFGKRSISLICEHLQKLHNAGSRPQARFFTTLLINRMG*
Ga0079303_101684342	3300006930	Deep Subsurface	VQIGIYQEPTTRVLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNALL*
Ga0105105_100218661	3300009009	Freshwater Sediment	LNRALKDTHQAVSQGVRRFGKRSLPAADEHLQKPHNAGSRPQAQF
Ga0105105_105149471	3300009009	Freshwater Sediment	VLQNKHQAVSQGARRFGKRSPPAADEHLQKPHNAGSRPQARFFNTLLNV
Ga0105093_100081417	3300009037	Freshwater Sediment	VLKDTHQAVSQGVRRFGKRSPPKADEHLQKPCNAGSRPQAQFFN
Ga0105093_100081615	3300009037	Freshwater Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG*
Ga0105093_100335653	3300009037	Freshwater Sediment	LKDTHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNPCY*
Ga0105090_104070581	3300009075	Freshwater Sediment	AVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFFNTLLINRMG*
Ga0105090_107171631	3300009075	Freshwater Sediment	VLKNKHEAVSQGVRRFGRRSPPAADEHLQKPHNAGSRPQARFFNTLLIN
Ga0105098_101405552	3300009081	Freshwater Sediment	LKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRREARFFNTLLKAFPTEGIP
Ga0105098_104640222	3300009081	Freshwater Sediment	VLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQARFFNTLIEHNR
Ga0105099_100934701	3300009082	Freshwater Sediment	VLKNKHPAVRQGVRRFGKRSPPEADEHLQKPHNAGSRREARFLTTLLII
Ga0105103_100391702	3300009085	Freshwater Sediment	RVFKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFITLLVP*
Ga0105091_100954201	3300009146	Freshwater Sediment	VFKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFKRLY
Ga0105102_101293981	3300009165	Freshwater Sediment	KHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG*
Ga0105102_103566991	3300009165	Freshwater Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKLHNARARREARFFNTLLN
Ga0105097_100982451	3300009169	Freshwater Sediment	HQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNPC*
Ga0115028_117059201	3300009179	Wetland	RVLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRREAPFFGTLSAGVG*
Ga0075354_11112431	3300014308	Natural And Restored Wetlands	VLKNKHQAVSQGVRRFGKRSIFEICEHLQKPHNAGSRREARFFNTL
Ga0180116_12932504	3300019229	Groundwater Sediment	SQRRFSRVLRNKHQAVSQGVWRYGKRSPPEADEHLQKPHNAGSRPQALFFKTLSGW
Ga0124853_15085561	3300024056	Freshwater Wetlands	SNRVLKNKHQAVSQGVRRFVKRSILIICEHLQKLHNAGSRLQAQFCNTLLSYHFICRGGC
Ga0210069_10462111	3300025958	Natural And Restored Wetlands	MFGRVLKNKHQAVSQGVRRFGKRSIFIICEHLQKPHNAGSRREARFFNTLVSAPGG
Ga0210117_10019243	3300025985	Natural And Restored Wetlands	VFKNKHQAVSQGVRRVGKRSIFIICEHLQKPGNAGSRLEAQFFNSLPGGEDVKK
Ga0256810_10133901	3300026357	Sediment	VLKNKHQAVSQGVRRFGKRSILVICEHLQKPHNAGSRREAQFSNTLLI
Ga0209077_11484202	3300027675	Freshwater Sediment	MAPQAGFIRVFKNKHKAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNTLIGGG
Ga0209392_10237812	3300027683	Freshwater Sediment	NKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFITLLVP
Ga0209392_10806031	3300027683	Freshwater Sediment	VLKDTHQAVSQGVRRFGKRSPPKADEHLQKPCNAGSRPQA
Ga0209704_11071763	3300027693	Freshwater Sediment	KNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNPC
Ga0209704_12017591	3300027693	Freshwater Sediment	VLKNKHQLVSQGARRIGKRSPPEADEHLQKSRNAGLRPQAQFFN
Ga0209682_101825182	3300027716	Wetland Sediment	LKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRREARFFNILLIYTRD
Ga0209492_10257923	3300027721	Freshwater Sediment	VLKNKHEAVSQGVRRFGRRSPPAADEHLQKPHNAGSRPQARFFNTLLINRMG
Ga0209492_11729221	3300027721	Freshwater Sediment	LNRALKDTHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFF
Ga0209285_100596781	3300027726	Freshwater Sediment	KNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG
Ga0209285_100716771	3300027726	Freshwater Sediment	LKNKHQAVSQGVRHFGKRSPPAADEHLQKPHNAGSRPQAQFFNTLLSHMR
Ga0209575_100471424	3300027739	Freshwater	KHQAVSQGVRRFEKRSPPEADEHLQKPYTAGSRPQVRFFNILLK
Ga0209575_102966331	3300027739	Freshwater	VFSGKPFPSGWLQSKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFDTLL
Ga0209373_101962532	3300027796	Freshwater	VLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRREARFFNILLIYTRDL
Ga0209262_100270781	3300027841	Freshwater	VFKNERLAVSQGVRRFGTRSPPAADEHFQKPHNAGSRPEAQFFN
Ga0209397_102462351	3300027871	Wetland	VFKNKHQAVSQGVRRFGMRSPLEADEHLQKPHSAGSRREARFFSTLL
Ga0209450_100583941	3300027885	Freshwater Lake Sediment	VLKNKHHAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPEARFFKTLLIQSV
Ga0209450_100969523	3300027885	Freshwater Lake Sediment	VSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG
Ga0209450_105054851	3300027885	Freshwater Lake Sediment	VFKIKYQTVSQGVRRFGKRSPPVADEHLQKPHNAGSRREARFFNILLIYTRDP
Ga0209450_105944761	3300027885	Freshwater Lake Sediment	VFSGKPFPSGWLQSKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFDT
Ga0208980_104300672	3300027887	Wetland	VLKNKHQVVSQGVRRFGKRSPPEADEHLQKPHNAGSRREARFFNILLIYTRDP
Ga0209668_101592573	3300027899	Freshwater Lake Sediment	RVLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNALL
Ga0209668_101608731	3300027899	Freshwater Lake Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRREARFFNILLIYTRDL
Ga0209668_105653091	3300027899	Freshwater Lake Sediment	PRFNRVLKNKHQAVSQGVRRFGKRSISLICEHLQKLHNAGSRPQARFFTTLLINRMG
Ga0209820_10516681	3300027956	Freshwater Sediment	RPRFNRVLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG
Ga0209079_103495592	3300027972	Freshwater Sediment	PFLFVRVLKNKRQTVSQGVRRFGKRSPPAADEHLQNPHSAGSRPKAQFFNTLLSKSGINVGKLAR
Ga0209391_100324823	3300027975	Freshwater Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFSNTLLINRMG
Ga0209391_101976132	3300027975	Freshwater Sediment	KHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQARFFNTLLINRMG
Ga0315290_101709372	3300031834	Sediment	VFKNKHQTVSQGVRRFGKRSIFIICEHLQKPHNAGSRPEARFFNTLLNRAGGFESR
Ga0315290_104477793	3300031834	Sediment	VLKDTHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFNPLLILIQEKSG
Ga0315290_105584092	3300031834	Sediment	VLKNKHQAFSQGVRRFGKRSPPEADEHLQKPHNAGLRPQAQFLNTLSNVGTCTGNGAGFF
Ga0315290_111088171	3300031834	Sediment	MGAGSMGIWVFYRVLKNKYQAVSPGVRRFGKRSPPEADEHLQKPHNAGSRPQTRFFNTLLVSG
Ga0315290_115938002	3300031834	Sediment	QHFLSRVLKSKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRRAAQFFR
Ga0214473_106501111	3300031949	Soil	VLKNKHQAVRHGVRRFGTRSPPEADEHLQKPHTAGSRPQALFF
Ga0214473_114746201	3300031949	Soil	MLKNQHQAVSQGVRLFGKRSPPEADEHLQKPLNAGSRPQARL
Ga0315278_109876342	3300031997	Sediment	VFNRVLKNKLQAVSQGVRRFGKRSIFIICEHLQKPHNAGSRREARFFNTLLI
Ga0315292_100601593	3300032143	Sediment	VLKDTHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQAQFFNPLLILIQEKSG
Ga0315292_109394202	3300032143	Sediment	MLKNEHQAVSQGLRRFGKRSPPAADEHLQKPHNAGSRPSARFFNTLLIL
Ga0315295_107343761	3300032156	Sediment	QGVRRFGKRSIFIICEHLQKPHNAGSRREARFFNILLIYTRDL
Ga0315295_113676601	3300032156	Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPRNVGSRPQAQFFKTLLGRL
Ga0315295_119433031	3300032156	Sediment	VFKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRRESPFFNALIESKQH
Ga0315283_101354853	3300032164	Sediment	GVRRFGKRSIFIICEHLQKPHNAGSRREARFFNILLIYTRDL
Ga0315268_103049641	3300032173	Sediment	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQLFNTLATEPL
Ga0315268_105321212	3300032173	Sediment	KLQAVSQGVRRFGKRSIFIICEHLQKPHNARSRREARFFNTLLIYTRDL
Ga0315276_104227211	3300032177	Sediment	VFKNKLQAVSQGVRRFGKRSAPEAHEHLQKPHNAGSRPQARFFNTLL
Ga0315276_105358483	3300032177	Sediment	VSQGVRRFGKRSPPAADEHLQKPHNAGSRPQAQFFNPLLILIQEKSG
Ga0315276_109628911	3300032177	Sediment	VLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNEGSRREARFF
Ga0315276_117361161	3300032177	Sediment	VLKNKYQADSQGVRCFGKRSPPAADEHLQKPHNAGSRREARFFNT
Ga0315276_123914162	3300032177	Sediment	VLKNKPQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPEARVFNTLLQH
Ga0315271_107728742	3300032256	Sediment	MNQRDSNPPARFNRVFKNKLQAVSQGVRRFGKRSIFIICEHLQKPHNAGSRPEARFFNTLLNRAGGFESR
Ga0315287_100688451	3300032397	Sediment	VLKNKPQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPEARVFNTLVQHAQAF
Ga0315287_107684771	3300032397	Sediment	VFKNKHQAVGQGVRRFGKRSPPEADEHLQKPHNAGSRREARFFNTLSGLRN
Ga0315287_108419292	3300032397	Sediment	VLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPEARFFNILLESADHLELT
Ga0315287_128140612	3300032397	Sediment	VLQDKHQAVSQGVRRFGKRSPPEADEHLQKPRNAGSRPQARFFNT
Ga0315275_109056601	3300032401	Sediment	VLKNKHQAFSQGVRRFGKRSPPEADEHLEKPHNAGLRPQAQFLNT
Ga0315275_110785672	3300032401	Sediment	VLKNKHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSQPQARFLTPC
Ga0315275_118962121	3300032401	Sediment	VLKNEHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRRKARFFKTLLC
Ga0315275_122946251	3300032401	Sediment	KNKHQAVSQGVRRFGKRSIFIICEHLQKPHNAGSRPEARFFNTLLNRAGGFESR
Ga0316603_119259832	3300033413	Soil	MPHSVSRVLKKKHQAVSQGVRRLGRRSPPEADEHLQKPHNAGSWREARFFNILFESADHRELT
Ga0316619_104606741	3300033414	Soil	VLDICSSKVLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPWALFFDTLL
Ga0316625_1001193002	3300033418	Soil	LLKSRVFKNKHQAVSQGVRRFEKRSIFIICEHLQKPHNAGSRPEARFFNTLL
Ga0316625_1021779152	3300033418	Soil	RVLKNEHQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQARFFNTLLINRMG
Ga0316601_1018376051	3300033419	Soil	KHRAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQARFFNTLLINRMG
Ga0316627_1013051732	3300033482	Soil	RAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPQARFFNTLLINRMG
Ga0316629_103847981	3300033483	Soil	SCTLFLLKSRVFKNKHQAVSQGVRRFEKRSIFIICEHLQKPHNAGSRPEARFFNTLL
Ga0316616_1019886531	3300033521	Soil	MVKRYLFPIRVLKNKHQAVSHGGWRAGKRSPPAADERLQKPHNAGSRPQAKFFNTLLV
Ga0316617_1004389703	3300033557	Soil	VLKNKHQAVSQGVRRFGKRSPPAADEHLQKPHNAGSRPQTRVFNTLLINRMG
Ga0316617_1027159391	3300033557	Soil	HQAVSQGVRRFGKRSPPEADEHLQKPHNAGSRPWARFFDTLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences