NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096340

Metagenome Family F096340

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096340
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 70 residues
Representative Sequence MLVTDTLVSRSLGATFSELIGQPTLLELHVPGPSTVAPITGTTDTLPSSVASSEPPATVIPAES
Number of Associated Samples 55
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 44.90 %
% of genes near scaffold ends (potentially truncated) 34.62 %
% of genes from short scaffolds (< 2000 bps) 94.23 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.038 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(97.115 % of family members)
Environment Ontology (ENVO) Unclassified
(97.115 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(97.115 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 4.35%    β-sheet: 0.00%    Coil/Unstructured: 95.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.04 %
All OrganismsrootAll Organisms0.96 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005338|Ga0068868_102379981Not Available506Open in IMG/M
3300013297|Ga0157378_12306476Not Available590Open in IMG/M
3300014745|Ga0157377_10941842Not Available649Open in IMG/M
3300015274|Ga0182188_1030061Not Available609Open in IMG/M
3300015274|Ga0182188_1060694Not Available506Open in IMG/M
3300015275|Ga0182172_1041861Not Available601Open in IMG/M
3300015275|Ga0182172_1053365Not Available561Open in IMG/M
3300015275|Ga0182172_1069278Not Available518Open in IMG/M
3300015276|Ga0182170_1022226Not Available716Open in IMG/M
3300015276|Ga0182170_1074593Not Available508Open in IMG/M
3300015277|Ga0182128_1060938Not Available544Open in IMG/M
3300015281|Ga0182160_1015260Not Available808Open in IMG/M
3300015282|Ga0182124_1075816Not Available516Open in IMG/M
3300015285|Ga0182186_1042906Not Available611Open in IMG/M
3300015286|Ga0182176_1070027Not Available537Open in IMG/M
3300015288|Ga0182173_1012168Not Available866Open in IMG/M
3300015289|Ga0182138_1076471Not Available527Open in IMG/M
3300015294|Ga0182126_1079819Not Available532Open in IMG/M
3300015294|Ga0182126_1090053Not Available513Open in IMG/M
3300015295|Ga0182175_1078042Not Available541Open in IMG/M
3300015296|Ga0182157_1076448Not Available552Open in IMG/M
3300015298|Ga0182106_1025562Not Available759Open in IMG/M
3300015299|Ga0182107_1036482Not Available690Open in IMG/M
3300015300|Ga0182108_1068894Not Available576Open in IMG/M
3300015300|Ga0182108_1095563Not Available520Open in IMG/M
3300015300|Ga0182108_1095661Not Available520Open in IMG/M
3300015302|Ga0182143_1019622Not Available818Open in IMG/M
3300015302|Ga0182143_1022492Not Available787Open in IMG/M
3300015302|Ga0182143_1094362Not Available519Open in IMG/M
3300015303|Ga0182123_1021472Not Available774Open in IMG/M
3300015303|Ga0182123_1029883Not Available708Open in IMG/M
3300015303|Ga0182123_1088910Not Available519Open in IMG/M
3300015304|Ga0182112_1033287Not Available708Open in IMG/M
3300015304|Ga0182112_1076425Not Available556Open in IMG/M
3300015304|Ga0182112_1083827Not Available541Open in IMG/M
3300015305|Ga0182158_1040691Not Available666Open in IMG/M
3300015305|Ga0182158_1080921Not Available544Open in IMG/M
3300015308|Ga0182142_1035772Not Available715Open in IMG/M
3300015308|Ga0182142_1081331Not Available561Open in IMG/M
3300015321|Ga0182127_1094007Not Available551Open in IMG/M
3300015341|Ga0182187_1114678Not Available616Open in IMG/M
3300015341|Ga0182187_1145645Not Available565Open in IMG/M
3300015342|Ga0182109_1068685Not Available778Open in IMG/M
3300015343|Ga0182155_1127079Not Available622Open in IMG/M
3300015343|Ga0182155_1224808Not Available502Open in IMG/M
3300015344|Ga0182189_1044603Not Available908Open in IMG/M
3300015344|Ga0182189_1113286Not Available655Open in IMG/M
3300015344|Ga0182189_1148000Not Available594Open in IMG/M
3300015345|Ga0182111_1169965Not Available580Open in IMG/M
3300015346|Ga0182139_1084612Not Available754Open in IMG/M
3300015346|Ga0182139_1162795Not Available591Open in IMG/M
3300015346|Ga0182139_1188882Not Available557Open in IMG/M
3300015346|Ga0182139_1213944Not Available531Open in IMG/M
3300015347|Ga0182177_1072910Not Available798Open in IMG/M
3300015347|Ga0182177_1086734Not Available750Open in IMG/M
3300015347|Ga0182177_1122449Not Available660Open in IMG/M
3300015347|Ga0182177_1128224Not Available649Open in IMG/M
3300015355|Ga0182159_1262455Not Available571Open in IMG/M
3300015355|Ga0182159_1286691Not Available549Open in IMG/M
3300015361|Ga0182145_1123299Not Available586Open in IMG/M
3300015361|Ga0182145_1131077Not Available574Open in IMG/M
3300015361|Ga0182145_1141207Not Available560Open in IMG/M
3300017404|Ga0182203_1138750Not Available531Open in IMG/M
3300017404|Ga0182203_1141526Not Available528Open in IMG/M
3300017407|Ga0182220_1024869Not Available753Open in IMG/M
3300017407|Ga0182220_1029595Not Available719Open in IMG/M
3300017407|Ga0182220_1031370Not Available708Open in IMG/M
3300017409|Ga0182204_1036577Not Available718Open in IMG/M
3300017409|Ga0182204_1069702Not Available594Open in IMG/M
3300017409|Ga0182204_1083377Not Available563Open in IMG/M
3300017410|Ga0182207_1118070Not Available577Open in IMG/M
3300017411|Ga0182208_1027683Not Available801Open in IMG/M
3300017411|Ga0182208_1027818All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae800Open in IMG/M
3300017411|Ga0182208_1110823Not Available528Open in IMG/M
3300017411|Ga0182208_1116100Not Available520Open in IMG/M
3300017413|Ga0182222_1042691Not Available641Open in IMG/M
3300017415|Ga0182202_1049843Not Available697Open in IMG/M
3300017415|Ga0182202_1125759Not Available520Open in IMG/M
3300017425|Ga0182224_1050439Not Available732Open in IMG/M
3300017430|Ga0182192_1112642Not Available585Open in IMG/M
3300017430|Ga0182192_1133988Not Available550Open in IMG/M
3300017430|Ga0182192_1172897Not Available502Open in IMG/M
3300017433|Ga0182206_1085747Not Available613Open in IMG/M
3300017436|Ga0182209_1115947Not Available574Open in IMG/M
3300017438|Ga0182191_1063483Not Available716Open in IMG/M
3300017438|Ga0182191_1106813Not Available604Open in IMG/M
3300017442|Ga0182221_1084483Not Available626Open in IMG/M
3300017443|Ga0182193_1064928Not Available733Open in IMG/M
3300017443|Ga0182193_1092160Not Available653Open in IMG/M
3300017443|Ga0182193_1093628Not Available650Open in IMG/M
3300017683|Ga0182218_1109415Not Available559Open in IMG/M
3300017684|Ga0182225_1061563Not Available654Open in IMG/M
3300017684|Ga0182225_1140952Not Available506Open in IMG/M
3300017685|Ga0182227_1068350Not Available653Open in IMG/M
3300017685|Ga0182227_1134960Not Available504Open in IMG/M
3300017686|Ga0182205_1119188Not Available570Open in IMG/M
3300017686|Ga0182205_1128556Not Available555Open in IMG/M
3300017690|Ga0182223_1033866Not Available718Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere97.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068868_10237998113300005338Miscanthus RhizosphereRSLGASFSELIGQPTPPYLHVLGPSMVAPITATTEMLPSSVASSEPAASVIPAQPTAAPVLDPT*
Ga0157378_1230647613300013297Miscanthus RhizosphereVPDTSVSRSLGATFSELTGQPTLPYLHVLGPSIVAPITGTTEMLPSSVASSEPPATVIPTESQAAPVPDPT*
Ga0157377_1094184213300014745Miscanthus RhizosphereMGFTPAQTSSLLALDTTVFRSLGATFSELTGQPTLPYLHVPRPSMVAPIMGTTETLPSSVASSEPPASVIPAES*
Ga0182188_103006113300015274Miscanthus PhyllosphereSLIVLDAPVFRSLGASFSELTGQPTPPDLHVPGPSTVAPITGTIETLPSSVASSEPPALVIPVESQAHQS*
Ga0182188_106069413300015274Miscanthus PhyllosphereTPAQTSSLIVLDTLVSRSLGATFSELIGQPTPPYLHVPSPSIVAPITETIETLPSSVASSEPAALVIPA*
Ga0182172_104186113300015275Miscanthus PhyllosphereLSRSLGAIFSELTGKPTPSKLCVPAPTIVALVTRTTETLPSSVASSEPPASVIPAESQAAPVLDLT*
Ga0182172_105336513300015275Miscanthus PhyllosphereVSRSLGASFSELTGMPTPPYLHVLGPSTVALVTGTTETLPSSVASSEPTIVLLAQSTSALVLDPT*
Ga0182172_106927813300015275Miscanthus PhyllosphereQMGFTPAQTSSLLVPETTVFRSLGASFSELTGQPTPPDLHVPGPSTVAPIIGTIETLPSSVASSEPPASVIPVES*
Ga0182170_102222613300015276Miscanthus PhyllosphereVLTPISRTLGASFSELTGQPTLPEQHVHGPSTVAPITRTIEMLPSSVASSEQPALVIPADSQAAPIPDPTQTTSALLPATEG*
Ga0182170_107459323300015276Miscanthus PhyllosphereFASLVLALQFTSLQTGFTPAQTSSLHVPDTTVSRSLGATFSELTGHPTPPYLHILGASTVAPITGTTETLPSSVASSEPPATVIPIE*
Ga0182128_106093823300015277Miscanthus PhyllosphereMLVTDTPVSRSLGATFSELIGQPTPLELGVPRPSTVAPVTRTTETLPSLVASSEPP
Ga0182160_101526013300015281Miscanthus PhyllosphereVLVIDTSVSKSLSATFSELIGQPTSPELRVPIPTIVALVTRTTETLPSSVASSEPPPTVILPES*
Ga0182124_107581613300015282Miscanthus PhyllosphereVPDTSVSRSLGATFSELTGQPTPPDLHVPSPSIVAPITRTTEMLPSSVASSELAAIVVPIESHAALVPQ*
Ga0182186_104290613300015285Miscanthus PhyllosphereMLVIDTLVSRSLGATFSELTGQPTPLELRVPAPSRVALVTRTTETLPSYVASSEPAATVVPAESQATPVPQQTQNRF
Ga0182176_107002713300015286Miscanthus PhyllosphereVSRSLGASFSELTGQPTPPYLHVLGPSIVAHITETIETLPLSVASSEPATPVIPAQSIAVLVIDLT*
Ga0182173_101216813300015288Miscanthus PhyllosphereMLVTDTLVFGSLGATFSELIGQPTPPELRVLAPTTIAPVTGTTKTLPSSVAPSEPQHIVIPT
Ga0182138_107647113300015289Miscanthus PhyllospherePLHTGFTPAQTSSLLVTDTLVSRSLGATFSELTGQPTPPDLHVLGPSIVAPITRTTEMLPSFVASLEPPASVIPAES*
Ga0182141_107728513300015292Miscanthus PhyllosphereTQTSSLLVTDIPVSRSLGATFSELIGQPTPLDLYVPSPSTVAPITGTTETLPSSVASSEPPATVIPAES*
Ga0182126_107981913300015294Miscanthus PhyllosphereTGFTPAQTSSLLVLDTPVSRSHGATFSELTGQPTPPDLHVPGPSTVAPIIGTIETLPSSVASSEPPAIVIPVESQAASVPDPT*
Ga0182126_109005313300015294Miscanthus PhyllosphereMLVTDTPVFRSLDATFSELTRQPTPPDLRVSGPSTVAPITGTTETLPSSVASSEPPASVIPAES*
Ga0182175_107804213300015295Miscanthus PhyllosphereMAQTSSLLVLETIVSRSLGASFSELTGQPTPPYLHVLGPSIVAHITGTTETLPSSVASSEPSATVIPIES*
Ga0182157_107644813300015296Miscanthus PhyllosphereVLVTDTLVSRSLGATFSELIGQPTPPDLHVPGPSIVAPITGTTETLPLSIASSKPPALVIPIESQAAPVPDSTQMKGPNG*
Ga0182106_102556223300015298Miscanthus PhyllosphereVLVTDTLVSRSLGATFNELTGQPTPPELRVLVSSTVAPVTGTTEMLPSSVASLEPPASVIPAESQATPVLDLT*
Ga0182107_103648213300015299Miscanthus PhyllosphereVLASQFTPLQIGFTSAQTFSLLVPDTSVSRSLGATFSELTGQPTLPYLHVLGPSIVAPIIRTIEMLPSLVASSEPPATVIPA*
Ga0182108_106889413300015300Miscanthus PhyllosphereMLVTDTPVSRSLGATFSDLTGQPTPPELRVPGPSTIAPVTRTTETLPSSVASSEPPLIVIPVELHVALVL
Ga0182108_109556313300015300Miscanthus PhyllosphereVLETTVSRSLGATFSELTGQPTLPYLYVPGPSTVAPITETIETLPSSVASLEPPASVIPAQSTAAPVHDLI*
Ga0182108_109566113300015300Miscanthus PhyllosphereQTSSLIAPDTTVSRSLGSIFSELTGQHTSPYQHVPGPSTIAPITGTTETLPSSVASSEPPASMIPAES*
Ga0182143_101962213300015302Miscanthus PhyllosphereVLTLVSRSLGAIYSELIGQPSPPELHVPGPSTVAPITGTTKTLPSFVASSELSASVIPAELQAAPVPDLT*
Ga0182143_102249213300015302Miscanthus PhyllosphereMLVTDTPVSRSLGATFSELIGQPTPPELCVLGPSTIALVTRTTKTLPSSVASLEPPAIVILAAS*
Ga0182143_109436213300015302Miscanthus PhyllosphereMPDTSVLRSLGATFSELTGQPTPPYLHVPGPSTVAPITGTTKALPSSVASSEPPAIVIPIES*
Ga0182123_102147213300015303Miscanthus PhyllosphereMLVTDTLVSRSLSATFSELTGQPTPPELRVPIPTIVAPVTRTIETLPSSVASLEPPPTVILPESQAAPVIE*
Ga0182123_102988323300015303Miscanthus PhyllosphereVLVTDTLVSMSLSATFSELTRQPTLLELRVPVSSTVALVTGTTEMLLSSVASSEPPTIVIPLES*
Ga0182123_108891013300015303Miscanthus PhyllosphereMLVIDTLVSRSLGTTFSELTGQPTLQDLHVPGPSTVAPITGTIETLPSLVASSEPPISVIPTES*
Ga0182112_103328713300015304Miscanthus PhyllosphereMLVPDTPVSRSLGATFSELTGQPTPSDLHVPGTSTVAPITGTTETLPSSVASSLEPLPTVILPASQAATVPEQT*
Ga0182112_107642513300015304Miscanthus PhyllosphereVMGFTPTQSSSVLVTDTPVFRSLGATFSELTGQPTPPELCVPTPSIVAPVTGTTETLPSSIASSEPAATVVPAESQAAPVP*
Ga0182112_108382713300015304Miscanthus PhyllosphereVLTQVSRSLGASFGELTGQPTSLELHVLGPSIVAHITGTIETLPSSVASSKPVASIIPAQPTAALVSDLT*
Ga0182158_104069113300015305Miscanthus PhyllosphereMGFTLAQSSLVLVTDTLVSRSLGVTFSKLIGQPTPPELCVPAPTTISPVIGTIETFPSSIASSEPAATVIPAES*
Ga0182158_108092113300015305Miscanthus PhyllosphereVLDTSVSRSLGATFSELTRQPTPPYLHVPGPFIVAPINGTTETLPFSVASSELAALVIPAQSIVAPVVDPT*
Ga0182142_103577213300015308Miscanthus PhyllosphereMLVTDTLVSRSLGATFSELIGQPTPLELRVPAPTTVAPVTRTTETLHSLVALSEPPAIVIPAES*
Ga0182142_107084313300015308Miscanthus PhyllosphereASFSELTGMPTPPYLHVPGPSTVAPVTGTTETLPSSVASSEPIIVLPAQSTAALVPDPT*
Ga0182142_108133113300015308Miscanthus PhyllosphereLVPDTSVSRSLGATFSELTGQPTPPYLHVLGPSIVVPITGTTETLPSSVASLEPPALVVPT*
Ga0182140_105619913300015314Miscanthus PhyllosphereMGFTPAQTSSLLVPDTTVSRSLGATFSELIGQPTTPYLHVPGPTTVASIIGTTETLPSSVASLEPPPTVIPAECYSP*
Ga0182140_107032113300015314Miscanthus PhyllosphereSSLLVLDTSVSRSLGVSFSELTRQPTPPYLHVLGPSMAVPIIAMTEMLPSSVTSSEPAASVILAQPTAAPVPDLT*
Ga0182127_109400713300015321Miscanthus PhyllosphereMLVTDTLVSRSLGATFSELIGQPTPPELCVPRPSTIALVTGTIDTLPSSVASLEPPAIVIPAESQAALVLEQT*
Ga0182187_111467813300015341Miscanthus PhyllosphereFSELIGQPTMPYLHVLGPSTVAPITGTTEMLPSSVASLEPPAIVLPTESQAAPVLIRARPLHRRF*
Ga0182187_114564513300015341Miscanthus PhyllosphereVLVTDTLVSKSLGVTFSELIGQPTLLELCVPTPTIVALVTRTTETLPSSVASSEPPPTVIPLESQATPVLEQT*
Ga0182109_106868513300015342Miscanthus PhyllosphereMLVTDTPVFRSLDATFSELIGQPTPPELRVPVPTIVAPVTRTTEMLLSSVASSEPPPTVILPESQAASVPE*
Ga0182155_112707913300015343Miscanthus PhyllosphereLGASFSELIGQPTPPYLHVLGPSIVAPITGTIEMLPSSVASLEPPATVIPSES*
Ga0182155_122480813300015343Miscanthus PhyllosphereSLGATFSELIGQPTLLELRVPPTIVAPIVVTTEMIPSFVASSEPPQTVIATEADVAHFLQ
Ga0182189_104460313300015344Miscanthus PhyllosphereVLLTDTLVSRSLDATFSELTGQPTPLELRVSVSSTVAPVTRTTEMLPSSIASSEPPPIVILLESQATLVPKQT*
Ga0182189_111328613300015344Miscanthus PhyllosphereMAQTSSLLVLETIVSRSLGASFSELTGQPTLPYLHVLGPSTIAPITGTIEMLPSSVASLELPAIVIPTES*
Ga0182189_114800013300015344Miscanthus PhyllosphereTLAQTSSLLVPETTVSRNLGASFSELTGQPTLPYLHVPGPSTVAPITGTTETLPSLVASSELAAIVIPA*
Ga0182111_116996513300015345Miscanthus PhyllosphereMPDTPVLWSLGATFSELTWQTTPPDLHVPGPSTVAPITGITETLPSSVASSEPPALVIPIESQAAPVPDLT*
Ga0182139_108461213300015346Miscanthus PhyllosphereVPDTSVSRSLGATFSELIGQPTPPYLHILGPSIVAPITGTTEMLPSPVASSEQAAPVIDLT*
Ga0182139_116279513300015346Miscanthus PhyllosphereVLLTDTLVSRSLDATFSELTGQPTPLELRVSVSSTVAPVTRTTEMLPSSIASSEPSAIVIPAES*
Ga0182139_118888213300015346Miscanthus PhyllosphereLVSRSFDATFSELIGQPTPPELRVPVSSTVAPVIGTTEMLPSSVASSEPPAIVIPLDPQATPVPEQT*
Ga0182139_121394413300015346Miscanthus PhyllosphereMTDTLVSRSLGTTFSELIGQPTLPELCVPGPSIVAPVTGTIETLPSSVASSESPATVIHAES*
Ga0182177_107291013300015347Miscanthus PhyllosphereMGFTLAHASSLLVPDTSVSRSLGATFSELIGQPTPPYLHVLGPSTAAPITATTETLPSSVASSKLAASVMPAQPTAALVPDPT*
Ga0182177_108673423300015347Miscanthus PhyllosphereMLVLDTPVSRSLGASFSELIGHPTPLDLHVLGPSTIAHITGTTETIPSSVASSELPALVIPTESQATHVPD
Ga0182177_112244913300015347Miscanthus PhyllosphereMGFTLAQTSSMLVIDTPVSKSLGATFSELIGQPTPPDLHVPGPSIVDPITGTTKTLPSFVASSELSASVIPAELQAAPVPDLT*
Ga0182177_112822413300015347Miscanthus PhyllosphereVLVTDTPVSRSLGATFSELIGQPTPLELCVPTPSIGAPITGTTEMLPSSVASSEPPATVIPTES*
Ga0182159_126245513300015355Miscanthus PhyllosphereMGFTLAHSLSLLVIDTLVSRSLGASFRELTRQPTPPDQHVPSPSTVAPIIRTTETLPSSVASSEPPASVIPAE
Ga0182159_128669113300015355Miscanthus PhyllosphereTDTPVSRSLGATFSELTGQPTPLELRVPAPSIVAPVTGTTETLPSSIASSEPAATVVPAESQAAPVP*
Ga0182145_112329913300015361Miscanthus PhyllosphereLVSRSLGATFSELIGQPMPPKLRVSVPTIVAPVTGTTEMLPSSVASSEPPPTVILPESQATLVPE*
Ga0182145_113107723300015361Miscanthus PhyllosphereVLVTDTLVSRSLGATFSELIGKPTPLELRVPVPTIVAPVTRTMEMLLSSVASSEPPPTVILPESQAASVPE*
Ga0182145_114120713300015361Miscanthus PhyllosphereVSRSLGATFSELTGRPTPLELGVPTPTTVALVIGTIETLPSSIASLEPPAIVIPAESQAVPVLELT*
Ga0182203_105837113300017404Miscanthus PhyllosphereVLVTDTPVSRSLGTTFSELTGQPTPPQLHVPVPTTVAPVTGTTETLPSFVASSEPPASVIPVES
Ga0182203_113875013300017404Miscanthus PhyllosphereMLMTDTLVSRSFGATFSELTGQPTPPELCVPRPSTVAPVTRTTETLPLLVASSEPLATVIPTESQVTQVPE
Ga0182203_114152613300017404Miscanthus PhyllosphereSSSLLVLDTLVSRRLGATFSELTGQPTLPDLHIPSPSTVAPITRTTEMLPSSIALSKPPASVIPIES
Ga0182220_102486913300017407Miscanthus PhyllosphereMLVTETPVSRSLGTTFSELIGQPTPLELGVPRPSTVAPVTRTTETLPSLVASSEPPAIVIPAESQVAPVLEQT
Ga0182220_102959513300017407Miscanthus PhyllosphereMDTLVSRSLGATFSELIGQPTPLELRVPVPTTVAPVTGTTEMIPSSVASSEPPPTVILLE
Ga0182220_103137013300017407Miscanthus PhyllosphereMGFTPAQTSSMLVTDTPVSRSLGASFSELTGQPTPPDLHVPSPSTVAPIIGTTEMLPSLVASSEPPASVIPVES
Ga0182204_103657713300017409Miscanthus PhyllosphereVLVTDTPVYRSLGATFSELIGQPTPLELQVPAPTTVALVTRTTEMLPSSVASSEPPTTVIPPESQAAPFPK
Ga0182204_106970213300017409Miscanthus PhyllosphereVSDTSISRSLGATFSELIGQPTPPYLHVLGPSIVAPITRTTEMLPSSVASSELAALVIPAQSTAALVVDLT
Ga0182204_108337723300017409Miscanthus PhyllosphereMTDTSVSRSLGATFSELIGQPTLLELCVPTPTIVALVTRTTETLPSSVASSKPTATVIPIES
Ga0182207_111807013300017410Miscanthus PhyllosphereMLVTDTPVSRRLDATFSELIGQPTPLDLHVPGPSTVAPITETTETLPSSVASSEPPASVIPAESHATLVPQQTQIAQCHF
Ga0182208_102768313300017411Miscanthus PhyllosphereVPDTSVSRSLGATFSELTGWPTLPYLHVPGPSIVVPITGTIETLPSSVASSEPAAPVIPTQSTTALVVDPT
Ga0182208_102781813300017411Miscanthus PhyllosphereMLVTDTLVSRSLGTTFSELTGQPTPPDLHVPGPSTVAPITGTIEMLPSSVASSETPASVIPAES
Ga0182208_111082313300017411Miscanthus PhyllosphereVLMTDTLVSRSLGATFSELTGQPTPPELRVPVPTIVAPVTGTTEMLLSKVASSEPPAIVIPTES
Ga0182208_111610013300017411Miscanthus PhyllosphereMLVLDTPVSRSLGATFSELIGQLTPPDLHVPSPSIVAPITRTIETLPSSVASSEPPASVIPAES
Ga0182222_104269113300017413Miscanthus PhyllosphereMGFTLAHSSLLLVTDTPVSRSLGATFSELTGQPTLPELRVPRPSTIAPVTGTTEMFPSSVASSEPPATVIPTESQVTPVLE
Ga0182202_104984313300017415Miscanthus PhyllosphereVLVTDTPVSRSLGATFSELIGLPTLLELRVPAPTIVAPVTRTTKMLPSSVASSEPLPIVIPLE
Ga0182202_112575913300017415Miscanthus PhyllosphereVSRSLGASFNELTGQPTPSYLHVSGPSIVAPIIGTTETLPYSVASSEPAAPVISAQSIAAPVVDLTQTALASLP
Ga0182224_105043913300017425Miscanthus PhyllosphereMPDTPVSRSLGATFSELIGQPTPPDLHVPGPSTVAPITGTTKMLPSLVASSEPPASVIPVES
Ga0182192_111264213300017430Miscanthus PhyllosphereMGFTLAQTSSLLVPDTSVSRSLGATFSELIGQLTLPYLYVPGPSTVAPITGTTEMLPSSVASSEPPASIIPAGSQA
Ga0182192_113398813300017430Miscanthus PhyllosphereVPDTSVSRSLGATFSELTEQPTSPYLHVPGPSIVAHITRTTETLPSSVASSEPATPIIPAQSTTVLVVDPT
Ga0182192_117289713300017430Miscanthus PhyllosphereVLVTDTPVSRSLGATFSELIGQPTLPYLHVLGPSIVVPITGTTKTLPSSVASVIPTTSQSAPVPDPTQTTLGSLLAT
Ga0182206_108574713300017433Miscanthus PhyllosphereMGFKPAQTSSLLVPDTSVSRSLSATFNELAGQPTPPYLHISGPSTVAPITGTTETLPSLVASSEPPATVIPVESQATPVPDPT
Ga0182209_111594713300017436Miscanthus PhyllosphereAQTSSMLMTDTLVSRSHGATFSELTGQPTPPELRVLGPSTIAPVTGTTETLPSSVVSSEPPATVIPAES
Ga0182191_106348323300017438Miscanthus PhyllosphereMLVTDTPVSRSLGATFSELTGQPTPPYLHVPSPSIVAPIMGTIEMLPSSVASSEPPATVI
Ga0182191_110681323300017438Miscanthus PhyllosphereVLVTDTLVSRSLGATFSELIGQPTPLELRVPIPTIVALVTRTTETLPSSVASLEPPPTVIPPES
Ga0182221_108448313300017442Miscanthus PhyllosphereFTPPQNSSVLTPVFRSLGASFSELTGQPTLLELHVPGPSTVVPIIGTTEMLPSSVTSSEPPAIVIPAQSQAAPVPDPT
Ga0182193_106492813300017443Miscanthus PhyllosphereMLVTGTLVSRSLGATFSELIGQPTSLELCVPIPSTIALVTRTTEVLPSSVASSELPASVIPTKSQAAPVPDLT
Ga0182193_109216013300017443Miscanthus PhyllosphereVPNTPVSWSLGVTFSELIGQPTLLDLHVLGPSIVAPITGTTETLPSSVASSESPASVIPVESQAAPVLDPT
Ga0182193_109362813300017443Miscanthus PhyllosphereMGFTPAQSSSLLVTDTPISRSLGATFSELTGQPTPLELYVPSPSTVAPITGTTKMLPSSVASSEPPAIVIPAES
Ga0182218_110941513300017683Miscanthus PhyllosphereMGFTPAQTSSLLVLDTTVSRSLGATFSELTGQPTSPYQHVPGPSIVAPITGTIEMLPSSVASSEPPATVIPIES
Ga0182225_101721813300017684Miscanthus PhyllosphereMGFTPVQSSSMLVTDTPVSRSLGATFSELIGQPIPPELRVPGPSTVAPVTGATETLPSLVTSSEPPAIVRPVESQAASVPE
Ga0182225_106156313300017684Miscanthus PhyllosphereMLVPDTPVSRSLGATFSELTGQPTPPDLRVPGPSTVAPITGTTETLPSSIASSEPAAIMVPTES
Ga0182225_114095213300017684Miscanthus PhyllosphereVLVTDTLVSKSLGVTFSELIGQPTLLELCVPTPTIVALVTRTTETLPSSVASSKPTATVIPIES
Ga0182227_106835013300017685Miscanthus PhyllosphereVPDTSVSRSLGATFSELTGQPTPPYLHVPGPSTVAPITGTIETLPSSVASSEPPATVIPTETQAAPVPDPT
Ga0182227_113496013300017685Miscanthus PhyllosphereHTGFTPAQISSQLVLDTLVSQRLGATFSELTGQPTPPDLHVPGPSTVAPITGTTETLPSSVASSELPALVIPT
Ga0182205_111918813300017686Miscanthus PhyllosphereMLVTDTLVSRSLGATFSELIGQPTLLELHVPGPSTVAPITGTTDTLPSSVASSEPPATVIPAES
Ga0182205_112855613300017686Miscanthus PhyllosphereFTLAQTSSLLVPDTSVSRSVGATFSELIGQPTPPYLHVPGPSTVAPITGTTETLPSSVASSEPPATVIPVES
Ga0182223_103386623300017690Miscanthus PhyllosphereMGFTPAQTSSLLVPDTSVSKSLGATFSELIGQPTPPFLHVPGPSTVAPITGTTETLPSSI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.