Metagenome / Metatranscriptome Family F096399

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096399
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	97 residues
Representative Sequence	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.17 %
% of genes near scaffold ends (potentially truncated)	49.04 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.846 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.423 % of family members)
Environment Ontology (ENVO)	Unclassified (59.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.88% β-sheet: 1.96% Coil/Unstructured: 42.16%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF09851	SHOCT	5.77
PF01068	DNA_ligase_A_M	1.92
PF13505	OMP_b-brl	0.96
PF03237	Terminase_6N	0.96
PF12221	HflK_N	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
All Organisms	root	All Organisms	21.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
cellular organisms	root	All Organisms → cellular organisms	21.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	10.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Tardiphaga robiniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	10.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000733\|JGI12408J11912_1004035	Not Available	1376	Open in IMG/M
3300005332\|Ga0066388_105910789	Not Available	618	Open in IMG/M
3300005332\|Ga0066388_106141419	Not Available	606	Open in IMG/M
3300005363\|Ga0008090_15634867	Not Available	640	Open in IMG/M
3300005764\|Ga0066903_101446298	Not Available	1294	Open in IMG/M
3300010048\|Ga0126373_10881726	Not Available	958	Open in IMG/M
3300010048\|Ga0126373_12092639	Not Available	628	Open in IMG/M
3300010360\|Ga0126372_12779702	Not Available	541	Open in IMG/M
3300010376\|Ga0126381_101932165	Not Available	851	Open in IMG/M
3300016270\|Ga0182036_11568411	Not Available	554	Open in IMG/M
3300016270\|Ga0182036_11797155	Not Available	519	Open in IMG/M
3300016294\|Ga0182041_10666694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	920	Open in IMG/M
3300016319\|Ga0182033_10232914	Not Available	1486	Open in IMG/M
3300016319\|Ga0182033_12028342	Not Available	524	Open in IMG/M
3300016341\|Ga0182035_11001401	Not Available	741	Open in IMG/M
3300016341\|Ga0182035_11573370	Not Available	592	Open in IMG/M
3300016357\|Ga0182032_10502103	Not Available	998	Open in IMG/M
3300016357\|Ga0182032_10717473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	840	Open in IMG/M
3300016357\|Ga0182032_11365482	Not Available	613	Open in IMG/M
3300016422\|Ga0182039_11157903	Not Available	698	Open in IMG/M
3300016445\|Ga0182038_11134954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	695	Open in IMG/M
3300026783\|Ga0207778_112222	Not Available	616	Open in IMG/M
3300026804\|Ga0207737_106630	Not Available	810	Open in IMG/M
3300026810\|Ga0207801_106921	Not Available	730	Open in IMG/M
3300026819\|Ga0207765_109213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	820	Open in IMG/M
3300026819\|Ga0207765_116798	Not Available	574	Open in IMG/M
3300026823\|Ga0207759_118967	Not Available	533	Open in IMG/M
3300026824\|Ga0207723_111663	Not Available	686	Open in IMG/M
3300026833\|Ga0207728_125174	Not Available	523	Open in IMG/M
3300026839\|Ga0207764_121196	Not Available	578	Open in IMG/M
3300026845\|Ga0207760_106308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1015	Open in IMG/M
3300026847\|Ga0207802_1004316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1312	Open in IMG/M
3300026849\|Ga0207804_108912	Not Available	946	Open in IMG/M
3300026852\|Ga0207838_108052	Not Available	558	Open in IMG/M
3300026859\|Ga0207859_1025453	Not Available	507	Open in IMG/M
3300026862\|Ga0207724_1024444	Not Available	515	Open in IMG/M
3300026868\|Ga0207818_1004618	Not Available	1315	Open in IMG/M
3300026872\|Ga0207785_1002983	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300026876\|Ga0207837_1002826	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300026887\|Ga0207805_1012953	Not Available	881	Open in IMG/M
3300026909\|Ga0207858_1002764	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300026942\|Ga0207783_1005190	Not Available	1380	Open in IMG/M
3300026947\|Ga0207853_1033762	Not Available	706	Open in IMG/M
3300026981\|Ga0207822_1005083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300026982\|Ga0207854_1031676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	665	Open in IMG/M
3300026983\|Ga0207856_1045886	Not Available	581	Open in IMG/M
3300027011\|Ga0207740_1003683	Not Available	2524	Open in IMG/M
3300027014\|Ga0207815_1021413	Not Available	798	Open in IMG/M
3300027019\|Ga0207857_1019771	Not Available	1095	Open in IMG/M
3300027049\|Ga0207806_1015539	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027063\|Ga0207762_1017706	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300027330\|Ga0207777_1013119	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300027516\|Ga0207761_1005077	Not Available	3427	Open in IMG/M
3300027703\|Ga0207862_1095680	Not Available	893	Open in IMG/M
3300031543\|Ga0318516_10147895	Not Available	1349	Open in IMG/M
3300031564\|Ga0318573_10334582	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031564\|Ga0318573_10510623	Not Available	647	Open in IMG/M
3300031573\|Ga0310915_10014435	All Organisms → cellular organisms → Bacteria → Proteobacteria	4671	Open in IMG/M
3300031573\|Ga0310915_10267166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1205	Open in IMG/M
3300031573\|Ga0310915_10356668	Not Available	1037	Open in IMG/M
3300031573\|Ga0310915_10965691	Not Available	595	Open in IMG/M
3300031682\|Ga0318560_10456359	Not Available	692	Open in IMG/M
3300031719\|Ga0306917_10164096	Not Available	1659	Open in IMG/M
3300031719\|Ga0306917_10693965	Not Available	800	Open in IMG/M
3300031724\|Ga0318500_10505554	Not Available	608	Open in IMG/M
3300031724\|Ga0318500_10588541	Not Available	563	Open in IMG/M
3300031770\|Ga0318521_10516835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	718	Open in IMG/M
3300031770\|Ga0318521_10666139	Not Available	631	Open in IMG/M
3300031771\|Ga0318546_10869648	Not Available	634	Open in IMG/M
3300031778\|Ga0318498_10375082	Not Available	634	Open in IMG/M
3300031779\|Ga0318566_10533636	Not Available	574	Open in IMG/M
3300031782\|Ga0318552_10635168	Not Available	545	Open in IMG/M
3300031792\|Ga0318529_10092118	Not Available	1360	Open in IMG/M
3300031794\|Ga0318503_10113350	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300031833\|Ga0310917_10413608	Not Available	917	Open in IMG/M
3300031846\|Ga0318512_10489960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	623	Open in IMG/M
3300031846\|Ga0318512_10515541	Not Available	607	Open in IMG/M
3300031859\|Ga0318527_10271985	Not Available	721	Open in IMG/M
3300031860\|Ga0318495_10519299	Not Available	519	Open in IMG/M
3300031880\|Ga0318544_10416089	Not Available	523	Open in IMG/M
3300031893\|Ga0318536_10560763	Not Available	572	Open in IMG/M
3300031894\|Ga0318522_10247177	Not Available	676	Open in IMG/M
3300031910\|Ga0306923_10677311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1150	Open in IMG/M
3300031910\|Ga0306923_10816910	Not Available	1028	Open in IMG/M
3300031912\|Ga0306921_10222649	Not Available	2211	Open in IMG/M
3300031941\|Ga0310912_10686436	Not Available	794	Open in IMG/M
3300031942\|Ga0310916_11599635	Not Available	529	Open in IMG/M
3300031946\|Ga0310910_10830992	Not Available	726	Open in IMG/M
3300031954\|Ga0306926_11222783	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300032035\|Ga0310911_10621647	Not Available	626	Open in IMG/M
3300032035\|Ga0310911_10770480	Not Available	556	Open in IMG/M
3300032043\|Ga0318556_10457442	Not Available	668	Open in IMG/M
3300032051\|Ga0318532_10262705	Not Available	613	Open in IMG/M
3300032059\|Ga0318533_10430880	Not Available	964	Open in IMG/M
3300032059\|Ga0318533_10518867	Not Available	873	Open in IMG/M
3300032060\|Ga0318505_10227150	Not Available	877	Open in IMG/M
3300032064\|Ga0318510_10441091	Not Available	558	Open in IMG/M
3300032076\|Ga0306924_11932717	Not Available	610	Open in IMG/M
3300032090\|Ga0318518_10717742	Not Available	508	Open in IMG/M
3300032091\|Ga0318577_10453138	Not Available	612	Open in IMG/M
3300032261\|Ga0306920_100403623	Not Available	2032	Open in IMG/M
3300032261\|Ga0306920_101530179	Not Available	951	Open in IMG/M
3300033289\|Ga0310914_11832717	Not Available	511	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.42%
Loam	Environmental → Terrestrial → Soil → Loam	35.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	35.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	35.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000733	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026783	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 36 (SPAdes)	Environmental	Open in IMG/M
3300026804	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 2 (SPAdes)	Environmental	Open in IMG/M
3300026810	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026982	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12408J11912_10040354	3300000733	Tropical Forest Soil	ARDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR*
Ga0066388_1059107891	3300005332	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR*
Ga0066388_1061414192	3300005332	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIK
Ga0008090_156348671	3300005363	Tropical Rainforest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDAGELPDEIVDELKDAMRGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR*
Ga0066903_1014462982	3300005764	Tropical Forest Soil	MMHGQARSVPRCGHQVSVSPEWSPAFPDDDTFEAEGKYLTIREVCELVKHDAEALPDETVGRLMEAMHGDRRLLELLGRWRTYATGSQCLLELLDDRVRTFRLKR*
Ga0126373_108817262	3300010048	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSAAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDKIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRI
Ga0126373_120926391	3300010048	Tropical Forest Soil	MDRREAFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRI
Ga0126372_127797021	3300010360	Tropical Forest Soil	MDRREGFHAAVIKLRSPERSAAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDKIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR*
Ga0126381_1019321653	3300010376	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSAAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDKIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR*
Ga0182036_115684111	3300016270	Soil	AAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0182036_117971551	3300016270	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCNLVKDDDGVLPDEIVDERRLLELLGRSRTYATGSQCLL
Ga0182041_106666941	3300016294	Soil	MDRREGFHAAVIKLRSPERSAAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLEPLDNRIKTFRTKR
Ga0182033_102329143	3300016319	Soil	LNIDGEYQTIRQVCQLVKDEDGVLPDEIVGKLMGAMHGDRRLLELLGRSRTYATGSQCLLELLDNRIKTFQRKR
Ga0182033_120283421	3300016319	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQ
Ga0182035_110014012	3300016341	Soil	MDRREGFHAAVIKLWSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0182035_115733701	3300016341	Soil	AGMGAMDRREGFHAAVIKLRSPEWSPAFPDMNTLEVDGEYWTIRQVCELVKDDDGVLPDEIVGELMDAMHGDRRLLELLGRSRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0182032_105021031	3300016357	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVGELVDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKTVALTASRRPGRS
Ga0182032_107174731	3300016357	Soil	PDMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQFLLELLDNRIKTFRTKR
Ga0182032_113654821	3300016357	Soil	MDRREGFHAALIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLE
Ga0182039_111579032	3300016422	Soil	DRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVGELVDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKTVALTASRRPGRSSDGTG
Ga0182038_111349541	3300016445	Soil	MWAMDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207778_1122221	3300026783	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207737_1066301	3300026804	Tropical Forest Soil	RSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207801_1069212	3300026810	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207765_1092132	3300026819	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDQIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207765_1167982	3300026819	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIK
Ga0207759_1189671	3300026823	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207723_1116631	3300026824	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207728_1251741	3300026833	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207764_1211961	3300026839	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207760_1063081	3300026845	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207802_10043162	3300026847	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207804_1089121	3300026849	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDQIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207838_1080521	3300026852	Tropical Forest Soil	DMNTLNVDDEYWTIREICELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207859_10254531	3300026859	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTK
Ga0207724_10244441	3300026862	Tropical Forest Soil	NIDDEYWTIREICELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207818_10046183	3300026868	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207785_10029832	3300026872	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDFVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207837_10028263	3300026876	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDKIVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207805_10129531	3300026887	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDQIVDELKNAMHGVRRLLELLGRSRTYATGSQCLRELLDNRIKTFRTKR
Ga0207858_10027642	3300026909	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207783_10051903	3300026942	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207853_10337621	3300026947	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDELVDELKDAMHGVRRLPELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207822_10050833	3300026981	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207854_10316762	3300026982	Tropical Forest Soil	HAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207856_10458861	3300026983	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207740_10036835	3300027011	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207815_10214132	3300027014	Tropical Forest Soil	EWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKNAMHGVRRLLELLGSSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207857_10197712	3300027019	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207806_10155391	3300027049	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGSSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207762_10177061	3300027063	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVTDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLEL
Ga0207777_10131193	3300027330	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKNAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0207761_10050771	3300027516	Tropical Forest Soil	WAMDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0207862_10956801	3300027703	Tropical Forest Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDN
Ga0318516_101478951	3300031543	Soil	AFPDMNTLNVDDEYWTIREVCELVKDDDGVLPEEIVDELKDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0318573_103345821	3300031564	Soil	MDRREGFHAAVIKLRSPEWSAAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDKIVDELKDAMHGVRRLLELLGRSRTYATGS
Ga0318573_105106232	3300031564	Soil	MNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0310915_100144353	3300031573	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVGELVDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0310915_102671662	3300031573	Soil	MDRREGFHAAVIKLRSPERSAAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQFLLELLDNRIKTFRTKR
Ga0310915_103566681	3300031573	Soil	MWAMDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCPLELLDNRIKTFRTKR
Ga0310915_109656911	3300031573	Soil	MDRREGFHAALIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318560_104563592	3300031682	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCPLELLDNRIKTFRTKR
Ga0306917_101640962	3300031719	Soil	MGAMDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVGELVDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKTVALTASRRPGRSSDGTG
Ga0306917_106939651	3300031719	Soil	MDRREGFHAAVIKLRSSEWSPAFPDMNTLEVDGEYWTIREVCKLVKDDDGVLPDELVGELTDATHGDRRLLELLGSSRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0318500_105055541	3300031724	Soil	LRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDEIVRELMDAMHGDRRQLELLGRPRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0318500_105885412	3300031724	Soil	HEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318521_105168351	3300031770	Soil	PNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQFLLELLDNRIKTFRTKR
Ga0318521_106661391	3300031770	Soil	AMDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318546_108696482	3300031771	Soil	MDRREGFHVAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYSTGSQCLLELLDNRIKTFRTKR
Ga0318498_103750821	3300031778	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCQLELLDNRIKTFRTKR
Ga0318566_105336361	3300031779	Soil	MDRREGFHVAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVGELVDATHGDRRLLELLGRSRTYSTGSQCLLELLDNRIKTFRTKR
Ga0318552_106351681	3300031782	Soil	MDRREGFHVAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318529_100921184	3300031792	Soil	SPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318503_101133501	3300031794	Soil	MDRREGFHAAVIKLRSPERSAAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0310917_104136081	3300031833	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLEVDGEYWTIRQVCELVKDDDGVLPDEIVGELMDAMHGDRRLLELLGRSRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0318512_104899602	3300031846	Soil	PEWSPAFPDMNTLNVDDDYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318512_105155411	3300031846	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMDTLNVDDEYWTIREVCELVKDDDGVLPEEIVDELKDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0318527_102719851	3300031859	Soil	SPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318495_105192991	3300031860	Soil	PEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318544_104160891	3300031880	Soil	MDRREGFHAAVIKLRSPERSAAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQCLLELLDNRIKTFRTKR
Ga0318536_105607632	3300031893	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318522_102471772	3300031894	Soil	MDRREGFHVAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0318551_109554152	3300031896	Soil	YWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0306923_106773113	3300031910	Soil	AFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQFLLELLDNRIKTFRTKR
Ga0306923_108169102	3300031910	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLEVDGEYWTIREVCELVKDDDGVLPDELVDELMDATHGDRRLLELLGRSRTYSTGSQCLLELLDNRIKTFRTKR
Ga0306921_102226494	3300031912	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCPLELLDNRIKTFRTKR
Ga0310912_106864361	3300031941	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREICELVKDDDGVLPEEIVDELKDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0310916_115996351	3300031942	Soil	VNALGKTMGRLQKASEIFAAGMWVMDRQEGFHAAVIKFRSPEWSPAFPDMNTLNIDGEYQTIRQVCELVKDDAGELPDPTVGELMDAMHGDRRLLELLGRSRTYATGSQCLLELLDNRIKTFQRKR
Ga0310910_108309921	3300031946	Soil	TPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPEEIVDELKDATHGDRRLLELLGRLRTYSTGSQCLLKLLDNRIKTFQTKR
Ga0306926_112227832	3300031954	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLRAVGQS
Ga0310911_106216471	3300032035	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYSTGSQCLLELLD
Ga0310911_107704801	3300032035	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIREVCELVKDDDGVLPDEIVGELVDATHGDRRLLELLGRLRTYSTGSQCLLKL
Ga0318556_104574421	3300032043	Soil	PAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLEVLDNRIKTFRTKR
Ga0318532_102627051	3300032051	Soil	MDRREGFHAAVIKLRSPEWSPAFPNMNTLNVDGEYWTIRQVCELVKDDDGVLPDELVDELKDAMHGVRRLLELLGRSPTYATGSQFLLEL
Ga0318533_104308801	3300032059	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCLLELL
Ga0318533_105188672	3300032059	Soil	MDRREGFHAALIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLEVLDNRIKTFRTKR
Ga0318505_102271503	3300032060	Soil	FVKINTDVRNAVPTSWWFFPENRIGKTVGRLQQYLEIFAARMWPMDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCNLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCPLELLDNRIKTFRTKR
Ga0318510_104410911	3300032064	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFR
Ga0306924_119327171	3300032076	Soil	IKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCDLVKDDDGVLPDEIVDELKDAMHGVRRLLELLGRSRTYATGSQCPLELLDNRIKTFRTKR
Ga0318518_107177422	3300032090	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLD
Ga0318577_104531381	3300032091	Soil	RLAMDRREGFHVAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLEVLDNRIKTFRTKR
Ga0306920_1004036231	3300032261	Soil	VVCFLWLDRGRAMDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDDEYWTIRQVCDLVKDDDGVLPDEIVNELKDAMHGVRRLLELLGRSRTYATGSQCLLELLDNRIKTFRTKR
Ga0306920_1015301792	3300032261	Soil	MDRREGFHAAVIKLRSPEWSPAFPDMNTLNVDGEYWTIRQVCNLVKDDDGVLPDEIVDERRLLELLGRSRTYATGSQCLLRAVGQSDQNLSDKTVAVAASRRRGPSV
Ga0310914_118327172	3300033289	Soil	LEVDGEYWTIRQVCELVKDDDGVLPDEIVGELMDAMHGDRRLLELLGRSRTYSTGSQCLLKLLDNRIKTFQTKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096399

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences