Metagenome Family F096428

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096428
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	67 residues
Representative Sequence	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPVSPRWCPN
Number of Associated Samples	70
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (67.308 % of family members)
Environment Ontology (ENVO)	Unclassified (92.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.44% β-sheet: 0.00% Coil/Unstructured: 75.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04392	ABC_sub_bind	2.88
PF08450	SGL	1.92
PF00027	cNMP_binding	0.96
PF01381	HTH_3	0.96
PF13565	HTH_32	0.96
PF13767	DUF4168	0.96
PF08734	GYD	0.96
PF02586	SRAP	0.96
PF07369	DUF1488	0.96
PF13455	MUG113	0.96
PF12762	DDE_Tnp_IS1595	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.88
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.92
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.92
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.96
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	71.15 %
Unclassified	root	N/A	22.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	61.54 %
Unclassified	root	N/A	22.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.54 %
Unclassified	root	N/A	22.12 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.54 %
Unclassified	root	N/A	22.12 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	1.92 %
Aliidongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia	0.96 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.96 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.54 %
Unclassified	root	N/A	22.12 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1.92 %
unclassified Methylomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas	1.92 %
unclassified Methylovirgula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.96 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.54 %
Unclassified	root	N/A	22.12 %
Methylomonas sp. WSC-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	1.92 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1.92 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	0.96 %
Bradyrhizobium sp. Rc2d	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	0.96 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.96 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.54 %
Unclassified	root	N/A	22.12 %
Methylomonas sp. WSC-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	1.92 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1.92 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.96 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	0.96 %
Bradyrhizobium sp. Rc2d	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	0.96 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_103561545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	839	Open in IMG/M
3300009792\|Ga0126374_10132509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	1479	Open in IMG/M
3300010358\|Ga0126370_10287015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	1297	Open in IMG/M
3300016294\|Ga0182041_10513240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300016294\|Ga0182041_11078243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300016319\|Ga0182033_10086605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2262	Open in IMG/M
3300016319\|Ga0182033_10878184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300016357\|Ga0182032_10038109	Not Available	3012	Open in IMG/M
3300016387\|Ga0182040_10078297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2170	Open in IMG/M
3300016387\|Ga0182040_10171126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1570	Open in IMG/M
3300016387\|Ga0182040_10628856	Not Available	872	Open in IMG/M
3300016387\|Ga0182040_11665635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300016404\|Ga0182037_10147172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1770	Open in IMG/M
3300016404\|Ga0182037_10161877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1699	Open in IMG/M
3300016404\|Ga0182037_11323018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300016422\|Ga0182039_10535489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1016	Open in IMG/M
3300016445\|Ga0182038_10508566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300020581\|Ga0210399_10534494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	973	Open in IMG/M
3300021560\|Ga0126371_11297064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031231\|Ga0170824_104094212	Not Available	638	Open in IMG/M
3300031543\|Ga0318516_10741303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031546\|Ga0318538_10310374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300031564\|Ga0318573_10335417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300031573\|Ga0310915_10182945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	1460	Open in IMG/M
3300031640\|Ga0318555_10346233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031640\|Ga0318555_10563680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031679\|Ga0318561_10794335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031681\|Ga0318572_10018572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	3450	Open in IMG/M
3300031682\|Ga0318560_10091403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1564	Open in IMG/M
3300031719\|Ga0306917_10980157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031724\|Ga0318500_10140562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300031736\|Ga0318501_10111460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1376	Open in IMG/M
3300031744\|Ga0306918_10394133	Not Available	1078	Open in IMG/M
3300031744\|Ga0306918_10506298	Not Available	945	Open in IMG/M
3300031744\|Ga0306918_11097593	Not Available	616	Open in IMG/M
3300031744\|Ga0306918_11205022	Not Available	584	Open in IMG/M
3300031747\|Ga0318502_10309272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300031747\|Ga0318502_10382524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300031747\|Ga0318502_10940860	Not Available	526	Open in IMG/M
3300031748\|Ga0318492_10350907	Not Available	772	Open in IMG/M
3300031751\|Ga0318494_10103021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1575	Open in IMG/M
3300031754\|Ga0307475_10055152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2998	Open in IMG/M
3300031754\|Ga0307475_10253389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1410	Open in IMG/M
3300031763\|Ga0318537_10152585	Not Available	860	Open in IMG/M
3300031765\|Ga0318554_10073923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1892	Open in IMG/M
3300031768\|Ga0318509_10232531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300031768\|Ga0318509_10743567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300031770\|Ga0318521_10113230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300031770\|Ga0318521_10922900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300031781\|Ga0318547_10170673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	1288	Open in IMG/M
3300031781\|Ga0318547_10413978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300031793\|Ga0318548_10506100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300031797\|Ga0318550_10055546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1790	Open in IMG/M
3300031798\|Ga0318523_10416819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031819\|Ga0318568_10461993	Not Available	791	Open in IMG/M
3300031821\|Ga0318567_10323950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300031821\|Ga0318567_10606482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031821\|Ga0318567_10771895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300031832\|Ga0318499_10074530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1294	Open in IMG/M
3300031845\|Ga0318511_10623511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031879\|Ga0306919_10102077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2020	Open in IMG/M
3300031890\|Ga0306925_10989446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300031890\|Ga0306925_11892870	Not Available	567	Open in IMG/M
3300031893\|Ga0318536_10268778	Not Available	866	Open in IMG/M
3300031896\|Ga0318551_10202290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300031896\|Ga0318551_10381502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031896\|Ga0318551_10738631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300031897\|Ga0318520_10168755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300031897\|Ga0318520_10235371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1089	Open in IMG/M
3300031897\|Ga0318520_10246353	Not Available	1065	Open in IMG/M
3300031912\|Ga0306921_10335894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1767	Open in IMG/M
3300031941\|Ga0310912_10004279	All Organisms → cellular organisms → Bacteria → Proteobacteria	8463	Open in IMG/M
3300031942\|Ga0310916_10207164	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300031945\|Ga0310913_10393128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300031947\|Ga0310909_10200338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	1659	Open in IMG/M
3300031947\|Ga0310909_10682128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300031954\|Ga0306926_11486500	Not Available	782	Open in IMG/M
3300031959\|Ga0318530_10144108	Not Available	965	Open in IMG/M
3300031959\|Ga0318530_10154197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300032001\|Ga0306922_11387415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300032008\|Ga0318562_10848490	Not Available	522	Open in IMG/M
3300032010\|Ga0318569_10094920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1343	Open in IMG/M
3300032025\|Ga0318507_10433280	Not Available	572	Open in IMG/M
3300032039\|Ga0318559_10529286	Not Available	550	Open in IMG/M
3300032042\|Ga0318545_10102190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300032054\|Ga0318570_10389596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300032054\|Ga0318570_10602309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300032059\|Ga0318533_10064368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2472	Open in IMG/M
3300032059\|Ga0318533_10887258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300032060\|Ga0318505_10284211	Not Available	780	Open in IMG/M
3300032063\|Ga0318504_10383288	Not Available	669	Open in IMG/M
3300032064\|Ga0318510_10217694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300032065\|Ga0318513_10312935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300032076\|Ga0306924_11182682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300032076\|Ga0306924_12331681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	542	Open in IMG/M
3300032090\|Ga0318518_10330525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300032091\|Ga0318577_10204562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944	Open in IMG/M
3300032094\|Ga0318540_10387244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300033289\|Ga0310914_10432954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300033289\|Ga0310914_10601724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300033289\|Ga0310914_10898381	Not Available	785	Open in IMG/M
3300033289\|Ga0310914_11115396	Not Available	690	Open in IMG/M
3300033289\|Ga0310914_11773763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300033289\|Ga0310914_11829363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.04%
Loam	Environmental → Terrestrial → Soil → Loam	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	96.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	67.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1035615453	3300005764	Tropical Forest Soil	MRVLGLVLAGALALTASIGVQAGSLGPGSYTMPNGWNGDWRQAPSPSRQWNGGSVSRHWGSNGPSG
Ga0126374_101325091	3300009792	Tropical Forest Soil	MRFLGLVLAGALALTAPTAVEGGSLDPGYYPMPNGWNGDWRRAPSPSRQWNGGSVLQRWW
Ga0126370_102870152	3300010358	Tropical Forest Soil	MRVLGWVLAGALALTASIGVQAGSLGPGYYPMPNGWNGDWRRVPGPSHQWKGAGPSRWVPNALSGG*
Ga0182041_105132401	3300016294	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWHRAPGPSRQWNGGPVSPR
Ga0182041_110782432	3300016294	Soil	MRILGWILAGALALTVSIGAQAGSLGPGYYPMPNGWDGDWRRAPGPSRQWNGGPVSQRWCPNC
Ga0182033_100866055	3300016319	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVPSPSPQWNGGSVSRRWWPNGPPGWWACCLGP
Ga0182033_108781841	3300016319	Soil	MRVLGWVLAGALALTASTGVQAGSLGPGTYSMPNGWNGDWRRVPSPSRQWNGGSVSRRGWPNGPPGEGDQGLVPIFGDHSGFL
Ga0182032_100381098	3300016357	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPAFH
Ga0182040_100782971	3300016387	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQWNGGPVSPRWCPNCPPGGW
Ga0182040_101711261	3300016387	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQWNGGPVSPRWCPNCPPGGW
Ga0182040_106288562	3300016387	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNRDWRRAPGPSRQWNGRWVSRHWGPN
Ga0182040_116656351	3300016387	Soil	MEAPQETYMRVLGWVLAGALALTASVGVQAGSLGPGYYPMPNGWNGDWRRVPGPSHQWKGAGPSRWVPNALL
Ga0182037_101471721	3300016404	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRGPAHSHQPNGGRVSPRWATNCPPGGWVPYGGP
Ga0182037_101618771	3300016404	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVPSPSPQWNGGSVSRRWWPNGPPG
Ga0182037_113230181	3300016404	Soil	MRVLGLVLAGALALTAPTAVQAASLGPSWYPMPNGWDGDWRRAPHPSHQWNGGPVSPRWCQNCPP
Ga0182039_105354891	3300016422	Soil	MRVLGLILAGALALTAVTAVQAGSLGPGYHPMPNGWDGDWRRALGPSRQWNGGPV
Ga0182038_105085661	3300016445	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWHRAPGPSRQWNGGPVSPRWWSS
Ga0210399_105344941	3300020581	Soil	MRVLGWVLAGALALTAPIEVQAGSLGPAWYPMPNGWNGDWRRAPSPARPWNGGSVSRRWWPNGPPGARAC
Ga0126371_112970641	3300021560	Tropical Forest Soil	MRVLGWVLAGALALTASIGVQAGSLGAGYYPMPNGWNGDWRRVSGPPRQWKGGGSVAL
Ga0170824_1040942121	3300031231	Forest Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRQAPSPSRQWNGGSVSRRWWPNGPPGARACCPGPG
Ga0318516_107413032	3300031543	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRSCPNCSGGWA
Ga0318538_103103741	3300031546	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQRNGGPVSPRWCSNCPPGGWVPYGGPG
Ga0318573_103354172	3300031564	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPVSPRWCPN
Ga0310915_101829451	3300031573	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVSRHWGPN
Ga0318555_103462332	3300031640	Soil	MRVLGLVLAGVLALTAAVGVQAGSLGPGWYPMPNGWDGDWRRTPGPSRQWNGGPVSPRWVPN
Ga0318555_105636801	3300031640	Soil	MRVFGLVLAGALTLTAPIGIQAGSLGPGSYTMPNGWDGDWHRAPSPSRQWNSGPVSPRWCSNCPPGRWVCCPGPG
Ga0318561_107943351	3300031679	Soil	MRVLGWVLAGALALITSIGVQAGSLGPGYHPMPNGWNDDWRRAPSSSPQWNGGPVSPHWVHNGPSGWWACCAARGVP
Ga0318572_100185722	3300031681	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVSRHWGPNGPPGGWCPCVVQGVPTYW
Ga0318560_100914031	3300031682	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPASPRWCPN
Ga0306917_109801571	3300031719	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDWRRVPGPSRQWNGGPVSRHWGWNRPPGGW
Ga0318500_101405623	3300031724	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPGPSRQWNGGPV
Ga0318501_101114602	3300031736	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPAGGWCPC
Ga0306918_103941333	3300031744	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDSRRVPGPSRQWNGGWVSRRWWPL
Ga0306918_105062981	3300031744	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGWYPMPNGWDGDWRRAPSPTRQSNGGPVS
Ga0306918_110975931	3300031744	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQWNRGPVSPHWV
Ga0306918_112050222	3300031744	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPASPRWCPNCLPG
Ga0318502_103092721	3300031747	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSPSRQWNGGSVSPRWCSNCPP
Ga0318502_103825241	3300031747	Soil	MRVLGWVLAGALALTASIGVQAGSLVPGWYPMPNGWDGDWRRAPSPSRQWNGGPASPRWCPNCLPGG
Ga0318502_109408601	3300031747	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPGPSRRWNGGPVSPHWCPNCPSG
Ga0318492_103509071	3300031748	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQWNRGPVSPHWVHNGPSGW
Ga0318494_101030213	3300031751	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQRNGGPVSPRWCSNCPPGGWVPYGGPGVPTYWVY
Ga0307475_100551526	3300031754	Hardwood Forest Soil	MRVLGLVLAGALALTAPIAPQAGSLGPGWYPMSNGWDGDWRRAPGPSRQWNGGPVSPRWCLNCPPGGWGPYSA
Ga0307475_102533894	3300031754	Hardwood Forest Soil	MRVLGLVLAGALALAASVGVQAGSLGPGSYSMPNGWDGDWHRAAGPSRQWNGGPVSPR
Ga0318537_101525852	3300031763	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQWNGGPVSPRW
Ga0318554_100739231	3300031765	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNGRWVSRHWGPNGPPGG
Ga0318509_102325311	3300031768	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPAGGW
Ga0318509_107435671	3300031768	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWHRAPGPSRQWNGGPVS
Ga0318521_101132301	3300031770	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVSRHWGPNGPPGGWCPCVVQGVPT
Ga0318521_109229001	3300031770	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRAPGPSRQWNGGPVSQRWCPNCPAGGSACCPGAGVPTY
Ga0318547_101706731	3300031781	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVSRHWG
Ga0318547_104139781	3300031781	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRSCPNCSGGRACCSGTGV
Ga0318548_105061001	3300031793	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRS
Ga0318550_100555463	3300031797	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVSRHWGPNGPPGGWCPCVVQGVPTYWV
Ga0318523_104168192	3300031798	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRSCPNCSGGRACCS
Ga0318568_104619931	3300031819	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDWRRVPGPSRQWNGGPVSRHWGWNRPPGGWCPCVVQGVPTY
Ga0318567_103239503	3300031821	Soil	MRVLGWVLAGALALTASIGVRAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPVS
Ga0318567_106064821	3300031821	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSN
Ga0318567_107718952	3300031821	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVPSPSPQWNGGSVSRRWWPNGPPGWWACCLGPSVPTYWVWGP
Ga0318499_100745301	3300031832	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPGSYSMPNGWDGDWHRAPGPSRQWNGGPVSPRWCPNC
Ga0318511_106235111	3300031845	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRSC
Ga0306919_101020771	3300031879	Soil	MRILGWILAGALALTVSIGAQAGSLGPGYYPMPNGWDGDWRRAPGPSRQWNGGPVSQRWCPN
Ga0306925_109894461	3300031890	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPASPRWC
Ga0306925_118928702	3300031890	Soil	MRVLGLALAGALALTASIAVQAGSLGPGYYPMPNGWNGDWRRAPGPSGQWNGAPVSHHWVPNGPSG
Ga0318536_102687782	3300031893	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNGRWVSRHWGPNGPPGGWCPCVVQGVPT
Ga0318551_102022901	3300031896	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDGDWRRAPSPSRQWNGGPASPRWCPNCLPGGWACCPGPGVPTYWV
Ga0318551_103815022	3300031896	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWHRAPGPSRQWNGGP
Ga0318551_107386311	3300031896	Soil	MRILGWILAGALALTVSIGAQAGSLGPGYYPMPNGWDGDWRRAPGPSRQWNGGPVSQRWCPNCPAGGSACCP
Ga0318520_101687551	3300031897	Soil	MRFLGLVLAGALALTATTAVQARSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPISPRSCPNCSGGWA
Ga0318520_102353711	3300031897	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPAGGWC
Ga0318520_102463533	3300031897	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPGPSRRWNGGPVSPRWCPNCPSGG
Ga0306921_103358944	3300031912	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNGRWVSRHWGPNGPPGGWCPCVVQGVPTY
Ga0310912_100042791	3300031941	Soil	MRILGWILAGALALTVSIGAQAGSLGPGYYPMPNGWDGDWRRAPGPSRQWNGGPVSQ
Ga0310916_102071643	3300031942	Soil	MRILGLVLSGVLALNATIGVQAGSLGPGWYPMPNGWNGDWRRAPGPSRQWNGGPFSRRWWPN
Ga0310913_103931283	3300031945	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPPG
Ga0310909_102003384	3300031947	Soil	MRVLGLVLAGALALTAPIGGYAGSLGPGSYSMPNGWDGDWRRAPGPSRQWNGGPVSPRWCPNCPSG
Ga0310909_106821281	3300031947	Soil	MRVLGLVLAGALALTAPTGVHAGSLGPGSYSMPNGWNGDWRRAPGPSRQWNGGPVSPRWCSNCPPGGWGPYGGPG
Ga0306926_114865002	3300031954	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDSRRVPGPSRQWNGGWVSRRWWPLA
Ga0318530_101441081	3300031959	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPGPSRRWNGGPVSPHWCLNC
Ga0318530_101541972	3300031959	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQRNGGPVSPRWCSNCPPGGWVPYGGPGVPTYWVYVP
Ga0306922_113874151	3300032001	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDWRRVPGPSRQWNGGPVSRHWG
Ga0318562_108484902	3300032008	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPGPSRRWNGGPVSPRWCPN
Ga0318569_100949201	3300032010	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSPSRQWNGGSVSPRWCSNCPPGGWGSFAGPG
Ga0318507_104332802	3300032025	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQWNGGPVS
Ga0318559_105292861	3300032039	Soil	MRVLGLVLAGVLALTAAVGVQAGSLGPGWYPMPNGWDGDWRRAPGPSRQWNSGPVSPRWC
Ga0318545_101021902	3300032042	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQRNGGPVSPRWCSNCPPGGWVPYGGPGVPTYWVYVPG
Ga0318570_103895961	3300032054	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPPGGWCPCVVQ
Ga0318570_106023092	3300032054	Soil	MRFLGLVLAGALALTATTAVQARSLGPGSYPMPNGWDGDWRRAPAPTRQWNGGPVSP
Ga0318533_100643681	3300032059	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPVSRHWGSNGPPGGWCPCVVQGVPTYW
Ga0318533_108872581	3300032059	Soil	MRVLGLVLAGALALTAPTAVQAASLGPSWYPMPNGWDGDWRRAPSPARQSNGRPVSPRRCQNCPPGGWGPK
Ga0318505_102842113	3300032060	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPGPSRRWNGGPVSPHW
Ga0318504_103832882	3300032063	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQWNRGPVSPHWVHNGPSGWWACCPARGVPTY
Ga0318510_102176941	3300032064	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSPSRQWNGGSVSPRWCSNCPPGGWGSFAGPGVPTYWVWG
Ga0318513_103129352	3300032065	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSPSRQWNGGSVSPRWCSNCPPGGWGSFAGPGVPTYWV
Ga0306924_111826822	3300032076	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNGRWVSRHWGPNG
Ga0306924_123316811	3300032076	Soil	MRVLGLVLAGALVLTASIGVQAGSLGPGWYPMPNGWDGDWRRAPGPSRQWNSGPVSPRWCPNCSPGGWACCPAPGV
Ga0318518_103305251	3300032090	Soil	MRVLRLVLAGVLALTAAVGVQAGSLGPGWYPMPNGWDGDWRRTPGPSRQWNGGPVSPRWV
Ga0318577_102045621	3300032091	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSPSRQWNGGSVSPRWCSNCPPGGWGSFA
Ga0318540_103872441	3300032094	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGPV
Ga0310914_104329543	3300033289	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNGRWVSRHWGPNGPPGGWCPCVVQGVP
Ga0310914_106017242	3300033289	Soil	MRVFGLVLAGALTLTAPIGIQAGSLGPGSYTMPNGWDGDWHRAPSPSRQWNSGPVSPRWCSNCPPGRWV
Ga0310914_108983811	3300033289	Soil	MRVLGLALAGALALTASIAVQAGSLGPGYYPMPNGWNGDWRRAPGPSGQSNGAPVSRHWVPNGPSGAGGCCP
Ga0310914_111153962	3300033289	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDSRRVPGPSRQWNGGWVSRRWWPLAGW
Ga0310914_117737632	3300033289	Soil	MRVLGLVLAGALALTAPTAVQAASLGPSWYPMPNGWDGDWRRAPSPARQSNGRPVSPRRCQNCPPGGWGPKS
Ga0310914_118293632	3300033289	Soil	MEAPQETYMRVLGWVLAGALVLTASIGVQVGSLGPGYYPMPNGWNGDWRRVPGPSHQWKGAGPSRWVPNALLGGCCPSPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences