Metagenome / Metatranscriptome Family F096451

Basic Information
Family ID	F096451
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	109 residues
Representative Sequence	MHGVASSSGIRRLLNENASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNFISVLTSDL
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.69 %
% of genes near scaffold ends (potentially truncated)	66.35 %
% of genes from short scaffolds (< 2000 bps)	97.12 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Unclassified (97.115 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (76.923 % of family members)
Environment Ontology (ENVO)	Unclassified (91.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (70.192 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 6.02% Coil/Unstructured: 51.13%
Feature Viewer

Powered by Feature Viewer

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
All Organisms	root	All Organisms	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Viruses	superkingdom	All Organisms → Viruses	1.92 %
cellular organisms	root	All Organisms → cellular organisms	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Brassicales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Brassicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005445\|Ga0070708_101852321	Not Available	560	Open in IMG/M
3300005615\|Ga0070702_100818727	Not Available	722	Open in IMG/M
3300005842\|Ga0068858_100782161	Not Available	931	Open in IMG/M
3300009553\|Ga0105249_12323003	Not Available	609	Open in IMG/M
3300009977\|Ga0105141_126844	Not Available	510	Open in IMG/M
3300009992\|Ga0105120_1006842	Not Available	1031	Open in IMG/M
3300009994\|Ga0105126_1035205	Not Available	601	Open in IMG/M
3300009995\|Ga0105139_1022463	Not Available	956	Open in IMG/M
3300010371\|Ga0134125_10926826	Not Available	956	Open in IMG/M
3300010371\|Ga0134125_12342324	Not Available	581	Open in IMG/M
3300010396\|Ga0134126_12480811	Not Available	564	Open in IMG/M
3300010397\|Ga0134124_12982811	Not Available	517	Open in IMG/M
3300015273\|Ga0182102_1026170	Not Available	591	Open in IMG/M
3300015280\|Ga0182100_1098610	Not Available	502	Open in IMG/M
3300015290\|Ga0182105_1041328	Not Available	700	Open in IMG/M
3300015293\|Ga0182103_1012097	Not Available	958	Open in IMG/M
3300015301\|Ga0182184_1030270	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae	753	Open in IMG/M
3300015301\|Ga0182184_1036366	Not Available	710	Open in IMG/M
3300015306\|Ga0182180_1052251	Not Available	623	Open in IMG/M
3300015310\|Ga0182162_1084695	Not Available	591	Open in IMG/M
3300015311\|Ga0182182_1026221	Not Available	848	Open in IMG/M
3300015311\|Ga0182182_1110449	Not Available	522	Open in IMG/M
3300015312\|Ga0182168_1079605	Not Available	622	Open in IMG/M
3300015312\|Ga0182168_1130286	Not Available	513	Open in IMG/M
3300015315\|Ga0182120_1013981	Not Available	1107	Open in IMG/M
3300015316\|Ga0182121_1043751	Not Available	801	Open in IMG/M
3300015316\|Ga0182121_1106599	Not Available	573	Open in IMG/M
3300015318\|Ga0182181_1107464	Not Available	516	Open in IMG/M
3300015319\|Ga0182130_1088202	Not Available	594	Open in IMG/M
3300015320\|Ga0182165_1044479	Not Available	789	Open in IMG/M
3300015320\|Ga0182165_1065373	Not Available	689	Open in IMG/M
3300015325\|Ga0182148_1089663	Not Available	607	Open in IMG/M
3300015325\|Ga0182148_1118318	Not Available	546	Open in IMG/M
3300015327\|Ga0182114_1124605	Not Available	562	Open in IMG/M
3300015331\|Ga0182131_1122431	Not Available	555	Open in IMG/M
3300015332\|Ga0182117_1032646	Not Available	957	Open in IMG/M
3300015332\|Ga0182117_1124496	Not Available	576	Open in IMG/M
3300015333\|Ga0182147_1064541	Not Available	740	Open in IMG/M
3300015335\|Ga0182116_1008196	Not Available	1485	Open in IMG/M
3300015335\|Ga0182116_1012389	Not Available	1324	Open in IMG/M
3300015335\|Ga0182116_1089439	Not Available	678	Open in IMG/M
3300015339\|Ga0182149_1034991	Not Available	930	Open in IMG/M
3300015339\|Ga0182149_1074503	Not Available	710	Open in IMG/M
3300015340\|Ga0182133_1135228	Not Available	586	Open in IMG/M
3300015340\|Ga0182133_1190731	Not Available	503	Open in IMG/M
3300015349\|Ga0182185_1130473	Not Available	739	Open in IMG/M
3300015349\|Ga0182185_1155425	Not Available	682	Open in IMG/M
3300015349\|Ga0182185_1192542	Not Available	616	Open in IMG/M
3300015352\|Ga0182169_1148991	Not Available	763	Open in IMG/M
3300015352\|Ga0182169_1153698	Not Available	751	Open in IMG/M
3300015352\|Ga0182169_1155572	Not Available	746	Open in IMG/M
3300015354\|Ga0182167_1028354	Not Available	1764	Open in IMG/M
3300015354\|Ga0182167_1107405	Not Available	1022	Open in IMG/M
3300017408\|Ga0182197_1063557	Not Available	700	Open in IMG/M
3300017412\|Ga0182199_1075781	Not Available	737	Open in IMG/M
3300017412\|Ga0182199_1136911	Not Available	590	Open in IMG/M
3300017421\|Ga0182213_1101765	Not Available	797	Open in IMG/M
3300017432\|Ga0182196_1050935	Not Available	740	Open in IMG/M
3300017432\|Ga0182196_1067430	Not Available	673	Open in IMG/M
3300017439\|Ga0182200_1089851	Not Available	623	Open in IMG/M
3300017445\|Ga0182198_1150181	Not Available	567	Open in IMG/M
3300017445\|Ga0182198_1157260	Not Available	557	Open in IMG/M
3300017447\|Ga0182215_1155875	Not Available	528	Open in IMG/M
3300017693\|Ga0182216_1007340	Not Available	1732	Open in IMG/M
3300017693\|Ga0182216_1112157	Not Available	663	Open in IMG/M
3300017693\|Ga0182216_1117888	Not Available	650	Open in IMG/M
3300017693\|Ga0182216_1133600	Not Available	619	Open in IMG/M
3300017694\|Ga0182211_1080819	Not Available	755	Open in IMG/M
3300020023\|Ga0182178_1011354	Not Available	640	Open in IMG/M
3300020031\|Ga0182119_103840	Not Available	610	Open in IMG/M
3300025972\|Ga0207668_11716985	Not Available	567	Open in IMG/M
3300028050\|Ga0268328_1000263	Not Available	2762	Open in IMG/M
3300028053\|Ga0268346_1041133	Not Available	516	Open in IMG/M
3300028056\|Ga0268330_1039272	Not Available	597	Open in IMG/M
3300028058\|Ga0268332_1035333	Not Available	674	Open in IMG/M
3300028152\|Ga0268336_1017373	Not Available	603	Open in IMG/M
3300028152\|Ga0268336_1021295	Not Available	567	Open in IMG/M
3300028248\|Ga0268312_1028999	Not Available	552	Open in IMG/M
3300028256\|Ga0268304_1003334	Not Available	812	Open in IMG/M
3300028262\|Ga0268310_1038801	Not Available	558	Open in IMG/M
3300028476\|Ga0268329_1009899	Not Available	696	Open in IMG/M
3300028476\|Ga0268329_1029081	Not Available	506	Open in IMG/M
3300032464\|Ga0214492_1016022	Not Available	1348	Open in IMG/M
3300032465\|Ga0214493_1053765	Not Available	951	Open in IMG/M
3300032466\|Ga0214503_1119153	Not Available	824	Open in IMG/M
3300032467\|Ga0214488_1028116	Not Available	1190	Open in IMG/M
3300032469\|Ga0214491_1007516	Not Available	2098	Open in IMG/M
3300032469\|Ga0214491_1049684	Not Available	1008	Open in IMG/M
3300032548\|Ga0214483_1086819	Not Available	508	Open in IMG/M
3300032551\|Ga0321339_1109358	Not Available	626	Open in IMG/M
3300032589\|Ga0214500_1102511	Not Available	814	Open in IMG/M
3300032589\|Ga0214500_1178003	Not Available	604	Open in IMG/M
3300032689\|Ga0214497_1006464	All Organisms → Viruses → Predicted Viral	1991	Open in IMG/M
3300032689\|Ga0214497_1096190	Not Available	645	Open in IMG/M
3300032689\|Ga0214497_1111996	Not Available	585	Open in IMG/M
3300032758\|Ga0314746_1009258	Not Available	1843	Open in IMG/M
3300032761\|Ga0314733_1024398	All Organisms → Viruses → Predicted Viral	1112	Open in IMG/M
3300032789\|Ga0314725_1030554	Not Available	652	Open in IMG/M
3300032790\|Ga0314731_1069602	Not Available	575	Open in IMG/M
3300032791\|Ga0314748_1015205	Not Available	1481	Open in IMG/M
3300032889\|Ga0314751_1039139	Not Available	957	Open in IMG/M
3300032916\|Ga0314734_1002006	Not Available	2598	Open in IMG/M
3300032966\|Ga0314722_1029125	Not Available	881	Open in IMG/M
3300033538\|Ga0314755_1060134	Not Available	955	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	94.23%
Environmental	Environmental	5.77%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	94.23%
Terrestrial	Environmental → Terrestrial	5.77%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	87.50%
Soil	Environmental → Terrestrial → Soil	5.77%
Unclassified	Host-Associated → Plants → Unclassified	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	87.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	87.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	76.92%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	10.58%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009977	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_91 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300020031	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_31MAY2016_LD2 MG	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300032464	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032469	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032548	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032551	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032589	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032758	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032761	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032789	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032790	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032791	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032889	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032916	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032966	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033538	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070708_1018523211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RRLLNKNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSDPSSSV*
Ga0070702_1008187271	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SSVVRRLTNGYSSECNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGACWCLGMCDVTHCNPLLCNLTSVLTSDPSSSVQG*
Ga0068858_1007821611	3300005842	Switchgrass Rhizosphere	HWSVHGVASSSRIHRLTNGNAFECNIMGCLGFPLTYLVSSGTVELLLLISLVVVFSCMTLMPRRNLGPHVCCSHMIEPLGVRWCLGMCDVTHYDPLLCNLTSVLSVDPSSRV*
Ga0105249_123230031	3300009553	Switchgrass Rhizosphere	MHGVASSLGIRRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHYNFFLCNLTSVITSDPYSSV*
Ga0105141_1268441	3300009977	Switchgrass Associated	MHGVASSSGIHRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVHCCHMIELLGAHWCLDMCDITHYNLLLCNLTSVLTSDPYSSV*
Ga0105120_10068422	3300009992	Switchgrass Associated	VLDKLKRFMTKLLFEYSHCNNHASRHWLVHGVASSSRIHRLNAFECNIVGCLGFPLTYLVSSSLVGLLLLISLVVVFSCMTLMSRRNLGSHVCYNHMIEPLGVRWCLGMCDVIPYDPLLCNLTSVLSVDPSSRV*
Ga0105126_10352051	3300009994	Switchgrass Associated	VHGVASSSRIHRLTNGNAFECNIVGCPGFPLIYLVAGTVGLLLSISFAVVFSCINQMPRRNLGPRVCYRNMIVLLGACWYLGL*
Ga0105139_10224631	3300009995	Switchgrass Associated	MHGVAPSSVIRRLTNGYSSECNIVGCLQFPLTYIAVAGTIGLLLLISLMVVFRHVTLMPRRNLDSCVRCSHMIELQGARWCLGMCDITHYNPLLCNLTSVITSDPYSSVQG*
Ga0134125_109268262	3300010371	Terrestrial Soil	MHGVASSSGIRRLLNKNASEYNIVGCPQFPVTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS*
Ga0134125_123423241	3300010371	Terrestrial Soil	MHGVASSSGIRRLLNENASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNFISVLTSDL
Ga0134126_124808111	3300010396	Terrestrial Soil	MTNGYASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCGVTHCNSILCNL
Ga0134124_129828111	3300010397	Terrestrial Soil	NHATRHWSVHGVVSLSRIHRLTNGNAFECNIVGCLGFPLTYLVVAGTIGLLLLISLVVVFSHVTLMPRRNLGPHVRCSHMIEPLGVCWCLGIGDITHLNLFLCNPY*
Ga0182102_10261701	3300015273	Switchgrass Phyllosphere	MIIITFGNTVLDAIIMHHIISCQWSMHGIASSSGIRRLLNGNASEYNIVGCLQFPLTYPAIAGTIGLLLLISRVVMFRHVILMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS*
Ga0182100_10986101	3300015280	Switchgrass Phyllosphere	SSGIRRLTNGYASVYNIVGCLWFPLTYLVVAGTIGLLLLISFVVVFSHVTMMPRRNLEPHVRCSHMIEPLGARWCLGICDIPHLNPFLCNPY*
Ga0182105_10413281	3300015290	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCGVTHCNPLLCNLTSVLTSG
Ga0182103_10120971	3300015293	Switchgrass Phyllosphere	ASEYNIVGCLRFPLTYLVVAGTIELLLLISFVVVFSHVTMMPRRNLEPHVRCSHMIEPLGARWCLGICDIPHLNPFL*
Ga0182184_10302701	3300015301	Switchgrass Phyllosphere	NIVGCLGFPLTYLVSSGTVELLLLISLVVVFSCMTLMPPQNLGPHVCCNHMIEPLGARWCLGMCDVTHYVPLLCNLTSVLSVDPSSRV*
Ga0182184_10363661	3300015301	Switchgrass Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYPAIAGTIGLLLLISLVVVFNHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS
Ga0182180_10522511	3300015306	Switchgrass Phyllosphere	SMHGVASSSGIRRLLNENASEYNIVGCLQFPLTYLAVVGTIGLLLLISRVVMFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNSLLCNLTSVLTSGPYSRV*
Ga0182162_10846951	3300015310	Switchgrass Phyllosphere	MHHIISCHCSVLGVASPSRIRSLTNGYASEYNIVGCLRFPLNYLVVAGAIGLLLLISLVVVFSHVTLMPRRNLGPHVRCSHMIEPLGARWCLGICDITHLNPFLYNPL
Ga0182182_10262211	3300015311	Switchgrass Phyllosphere	NASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSDPYSSV*
Ga0182182_11104491	3300015311	Switchgrass Phyllosphere	KYHFLNIVIVTVIHHIIPMHGVASSSGIRRLTNGYASEYNIVGCLRFPLTYLVVVGTIRLLLLISIVVVFSHVTLMPCRNLGPYVHCSHMIDPLGAHWCLGICDITHCNPLLCNLTSVLTFDPRSRI*
Ga0182168_10796051	3300015312	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNSILCNLTSV
Ga0182168_11302861	3300015312	Switchgrass Phyllosphere	MHGVAPSSVIRRLTNGYAFECNIVGCLQFPLTYLAVAGTIGLLLLISREVMFGHVTLMPRRNLDSCVRCSHMIELFGARECLGMCDVTHCNSLLCNLTSVLTFD
Ga0182120_10139812	3300015315	Switchgrass Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS*
Ga0182121_10437512	3300015316	Switchgrass Phyllosphere	MIIVTFGNTVLDATIMHHIISCQWSMHGIASSSGIRRLLNGNASEYNIVGCLQFPLTYLAIAGTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCGVTHCNPLLCNLTSVLTSGPYSSV*
Ga0182121_11065992	3300015316	Switchgrass Phyllosphere	MHGIAPSSVIHRLTNGYVSEYNIVGCLGFPLNYLVASGTVGLLFLISIVVVSSHVTMMPRQNLDSCVRCSHMIELLGARWCLGMCDITHCNSFLCNPY*
Ga0182181_11074641	3300015318	Switchgrass Phyllosphere	MTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVCCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSDLYSCIGL
Ga0182130_10882021	3300015319	Switchgrass Phyllosphere	MHGVATSSGIRRLLNGNASEYNIVGCLQFPLTYLAVVGTIGLLLLIFLVVVFSHVILMPRRNLDSRVRCCHMIELLGARWCLGMCDVTHCNSILCNLTSVLTS
Ga0182165_10444791	3300015320	Switchgrass Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNFISVLTSDLYSSI*
Ga0182165_10653731	3300015320	Switchgrass Phyllosphere	NGNVFECNIVGCLGFPLTYLVSSGLVGLLLLISLVVVFSCMTLMPRQNLGPHVCCSHMIEPLGARWCLGMCDVTHCDPLLCNLTSVLSVDPSSRV*
Ga0182148_10896631	3300015325	Switchgrass Phyllosphere	MHGVASSSGIRRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVLSHVTLMPRRNLDSHVRCSHMIELLEARWCLGMCDVTHCNPLLCNLTSVLTSGPYSSVQG*
Ga0182148_11183181	3300015325	Switchgrass Phyllosphere	HLIPVHGVALLSGIHKLTNGYASEYNIEGCLRFPLIYLVIAGTIGLLLLIPLVVVFSHVTLMPRRNLGPHVRCSHMIEPLEARWCLGICDITHLNPFLCNPY*
Ga0182114_11246051	3300015327	Switchgrass Phyllosphere	VVPSSVIRRLTNGYAFECNIVGCLQFLLTYLAVAGTIGLLLLISRVVIFSHVTLMPQRNLEPHVRCSQIIEPLGARWCLGMCDLTHFNLFLCNPKVS*
Ga0182131_11224311	3300015331	Switchgrass Phyllosphere	MYHLIPVHGVALLSGIHKLTNGYASEYNIEGCLRFPLIYLVVAGTIGLLLLISLGVVFSRVTLMPRWNLGPHVRCSHMIEPLGVRWCLG
Ga0182117_10326461	3300015332	Switchgrass Phyllosphere	MHHIIPVHGVASLSGLHRLTNGYVSEYNIVGCLRFPLTSLVVAGTIGLLLLISFVVMFSHVTMMPRRNLGPHVCCSHMIEPLGARWCLGICD
Ga0182117_11244961	3300015332	Switchgrass Phyllosphere	MHGVASSSGIHRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLMLLISLVVVFRHVTLMPRRNLDSHVCCSHMIELLGARWCLGMCDVTHCNPLLCN
Ga0182147_10645411	3300015333	Switchgrass Phyllosphere	VHDYNNFLNTVIATVMHHVFSCHWSVHGVASSSGTRRLTNEYVSEYSFRLSSVPVTYLVVAGTIGLLFLISLVVVFSHTTKMPRRNLGPHVCCSHMIEPLGARRCLGMCDVTHYNPLLCNPY*
Ga0182116_10081961	3300015335	Switchgrass Phyllosphere	NMSKLNRFMTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSV*
Ga0182116_10123891	3300015335	Switchgrass Phyllosphere	MYHLIPVHGVALLSGIHKLTNGYASEYNIEGCLRFPLIYLVVAGTIGLLLLISLGVVFSRVTLMPRWNLGPHVRCSHMIEPLGVRWCLGICDITHLNPFLCNPY*
Ga0182116_10894392	3300015335	Switchgrass Phyllosphere	MHGVASSSEICRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFNHVTLMPRRNLDSCVRCSHMIELLGAHWRLGMCDVTHYNPLLCNLTSVLTSDPYSSV*
Ga0182149_10349911	3300015339	Switchgrass Phyllosphere	MYHLIPVHGVALLSGIHKLTNGYASEYNIEGCLRFPLIYLVVAGTIGLLLLISLGVVFSRVTLMPRWNLGPHVRCSHMIEPLGARWCLGVCDLTHFNPLLCNLTSILSLDPSSGA*
Ga0182149_10745031	3300015339	Switchgrass Phyllosphere	TFGNTVLDATIMHHIISCQWSMHGIASSSGIHRFLNENASEYNIVGCLQFPLTYLAVAGTIGLLLLISRVVMFRHVILMPRRNLDSCVRCSHMIEPLGARWCLGMCDITHCNPFLCNLTSVLTSDPYSSV*
Ga0182133_11352281	3300015340	Switchgrass Phyllosphere	LNTIIATIVMHHVISRHYSMHGAAPSSVIRRLTNGYASECNIVDCLQFPLTYLAVAGTVGLLFLISVVVVFSHVTMMPRQNLDSRVRCSHMIELLGARWCLGMCDVTHCNPLLCN
Ga0182133_11907311	3300015340	Switchgrass Phyllosphere	MHHIISCHCSVHSVVSSSRIRRLSNGYASEYNIVGCLRFPLTYLVVAGTIGLLLLISFVVVFSHVTMMPRRNLEPHVRCSHMIEPLGARWCLGICDIPHLN
Ga0182185_11304731	3300015349	Switchgrass Phyllosphere	MYHLIPVHGVALLSGIHRLTNGYAFEYNIVGCLQFPLTYLVVASAIGLLLLISLVVVFSHVTLMSQRNLGPHVRCSHMIEPLGMRWCLGICDIT
Ga0182185_11554251	3300015349	Switchgrass Phyllosphere	RLTNGYVSEYNIVGCLGFPLNYLVASGTVGLLFLISIVVVSSHVTMMPRQNLDSCVRCSHMIELLGARWCLGMCDITHCNSFLCNPY*
Ga0182185_11925422	3300015349	Switchgrass Phyllosphere	PVHGVASLSGLHRLTNGYVSEYNIVGCLRFPLTSLVVAGTIGLLLLISFVVVFSHVTMMPRWNLEPHVRCSHMIEPLGARWCLGICNIPHLNLFLCNLY*
Ga0182169_11489912	3300015352	Switchgrass Phyllosphere	MHGVASSSEICRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHATLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPFLCNLTSVLTSDPYSSV*
Ga0182169_11536981	3300015352	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPL
Ga0182169_11555721	3300015352	Switchgrass Phyllosphere	MHHIIPVHGVASLSGLHRLTNGNAFECNIVGCLRFPLNYLVASGTIGLLFLISVVVVFSHMTMMPRRNLYSRVRCSHMIELLEARWCL
Ga0182167_10283541	3300015354	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNFISVLTSDLYSSI*
Ga0182167_11074051	3300015354	Switchgrass Phyllosphere	MHDVTPSSVVRRLTNGYSSECNIVGCLQFPLTYLAVAGTIGLLLLISLMVVFSHVTLMPRQNLDSRVRCSHMIELLGVHWCLGMCDVTHCNPLLCNLTNVLTSDPYSSVQG*
Ga0182197_10635571	3300017408	Switchgrass Phyllosphere	LNTIIATIMHHIFSRHCSVHSVVSSSGIRRLTNGYASEYNIVGCLRFPLTYLVVAGTIGLLLLISFMVVFSHVTMMPRRNLEPHVHCSHMIEPLGARWCLDICDIPHLNPFLCNPY
Ga0182199_10757811	3300017412	Switchgrass Phyllosphere	MHGVAPSSVIRRLTNGYSSECNIGCLPFPLTYIAVAGTIGLLLLISLMVVFSHVTLMPRQNLDSRVRCSHMIELLGVHWCLGMCDVTHCKPLLCNLISVLTSDPYSSV
Ga0182199_11369111	3300017412	Switchgrass Phyllosphere	NNFFNTIIAKIMHHIFSRHCSVHSVVSSSGIRRLTNGYASEYNILGSLRFPLTYLVVAGTIGLLLLISFMVVFSHVTMMPWWNLRPHMRCSHMIEPLGARWCLGICDIPHLNLFLCNLY
Ga0182213_11017651	3300017421	Switchgrass Phyllosphere	MHHIIPVHGVASLSGLHRLTNGYVSEYNIVGCLRFPLTSLVVAGTIGLLLLISFVVMFSHVTIMPQRNLGPHVCCSHMIEPLGARWCLGMCDVTHCDPLLCNLTSVLSVDPSSGV
Ga0182196_10509351	3300017432	Switchgrass Phyllosphere	MPHIIPVHGVASLSEIHRLTNGYASEYNIVGCLRFPLTYLVVVGTIRLLLLISIVVVFSHVTLMPCRNLGPYVHCSHMIDPLGAHWCLGICDVTHCNPLLCNLTSVLTFDPRSRI
Ga0182196_10674301	3300017432	Switchgrass Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSRVRCNHMIELLGARWCLGMYDVTHCNSLQCNLTSVLTSGLYSSV
Ga0182200_10898511	3300017439	Switchgrass Phyllosphere	MHGVATSSGIRTLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLGPHVRCSHMIELLGGRWCLGMCDVTHCNPLLCNITSVLTSNPYSSV
Ga0182198_11501811	3300017445	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHIIELLGARWCLGMCDVTHCNLFLCNLTSVLTS
Ga0182198_11572601	3300017445	Switchgrass Phyllosphere	MHGIAPSSVIHRLTNGYVSEYNIVGCLGFPLTYLVVAGTIGLLLLISLVVVFSHVTLMPRRNLGPHVRCSHIIEPLGARWCLGICDITHLNLFLYNPY
Ga0182215_11558751	3300017447	Switchgrass Phyllosphere	NNHATRHWSVNGVASSSRIHRLTNGNVFECKIVGCLGFPLTYLVVAGTIGLLLLISLVVVFSHVSLILRRNLGPHVHCSHMIEPLGAHWCLGICDVTHCNPLLCNLTSVLTLDPRSRI
Ga0182216_10073401	3300017693	Switchgrass Phyllosphere	MTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLIYVVVVFSHMTMMPRRNLDSRVCCSHMIELLGARWCLGMCDVTHSNLLLCNLTSVLTSDPYSNV
Ga0182216_11121571	3300017693	Switchgrass Phyllosphere	MHHIISCQWSMHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSV
Ga0182216_11178881	3300017693	Switchgrass Phyllosphere	MHHIISCHCSVHSVVSSWEIRRLTNGYASEYNIVGCLRFPLTYLVVAGTIGLLLLISFMVVFSHVTMMPRRNLEPHVHCSHMIEPLGARWCLDICD
Ga0182216_11336001	3300017693	Switchgrass Phyllosphere	RMTNGYASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDLTQFNLFLCNP
Ga0182211_10808191	3300017694	Switchgrass Phyllosphere	MVHDYNNFLNTVIATVMHHVFSCHWSVHGVASSSGIRRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRNSHMIELLGARWCLGMCDVTHCNSLLCNP
Ga0182178_10113541	3300020023	Switchgrass Phyllosphere	MHGVASSSGIRRLLNENASEYNIVGCLQFPLTYLAVAGTIGLLLLIFCVVMFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNSLPCNLTSVLTSDPY
Ga0182119_1038401	3300020031	Switchgrass Phyllosphere	MHDVASSSGIRRLLNGNASEYNIVGGLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSDPSSSV
Ga0207668_117169851	3300025972	Switchgrass Rhizosphere	MHGVTSSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPFLCNLTSVLTFDPYSSV
Ga0268328_10002631	3300028050	Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS
Ga0268346_10411331	3300028053	Phyllosphere	MIVITFGNTVLDATIMHHIISCQWSMHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPL
Ga0268330_10392721	3300028056	Phyllosphere	MHGVASSLGIRRLLNGNASEYNIVGCLQFPLTYLAVAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVT
Ga0268332_10353331	3300028058	Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPL
Ga0268336_10173731	3300028152	Phyllosphere	MHGVASSSGIRRLLNKNASEYNIVGCPQFPLTYLAVASTIGLLLLISRVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSGPYSSVQG
Ga0268336_10212951	3300028152	Phyllosphere	MHGIAPSSVIHRLTNGYVSEYNIVGCLGFPLNYLVASGTVGLLFLISIVVVSSHVTMMPRQNLDSCVRCSHMIELLGARWCLGMCD
Ga0268312_10289991	3300028248	Phyllosphere	MHGVASSSGIRRLLNENASEYNIVGCLQFPLTYLAVVGTIGLLLLISLVVVCSHVTLMPRRNLGPHVRCSHMIELLGARWCLCMCDVTHCNP
Ga0268304_10033341	3300028256	Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVT
Ga0268310_10388011	3300028262	Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCNVTHCNPLLCNF
Ga0268329_10098991	3300028476	Phyllosphere	MTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLINGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCN
Ga0268329_10290811	3300028476	Phyllosphere	IHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNFISVLTSDLYSSI
Ga0214492_10160221	3300032464	Switchgrass Phyllosphere	MHHIISCQWSMHGITSSSGIRRLLHKNASEYNIVGCLQFPLTYLAVAGTIGLLLLSFRVVMFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPFLCNLISVITSDPYSRV
Ga0214493_10537651	3300032465	Switchgrass Phyllosphere	SRHCSMHGVASSSVIRILTNGYAFECNIVGCLRFLLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSV
Ga0214503_11191531	3300032466	Switchgrass Phyllosphere	MTIITFLNTIIATIVMHHVISRHCSMHGVVSSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLISIVVVFSHMTMMPRRNLDSRVCCSHMIELLGARWCLGMCDVTHSNLLCNLTSVLTSD
Ga0214488_10281163	3300032467	Switchgrass Phyllosphere	MGIRRLTNGYASEYNIVGCLRFPLAYLVVAGTIGLLLLISLLVVFSHVTMMPQRNLGPHVCCSHMIESQGARWCLGICDITHLNPFLCNSYQCPNF
Ga0214491_10075161	3300032469	Switchgrass Phyllosphere	MHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLLVS
Ga0214491_10496841	3300032469	Switchgrass Phyllosphere	SQSCINITSHHWSLHGVASSSGIRRLLNGNASEYNIVGCLQFPLTYLAVVGTIGLLLLIFLVVVFSHVILMPRRNLDSRVRCCHMIELLGARWCLGMCDVTHCNSILCNLTSVLTSDPYSSV
Ga0214483_10868191	3300032548	Switchgrass Phyllosphere	GVASLSGLHRLTKGYVSEYNIVGCLWFPLTSLVVASTIGLLLLISFVVMFSHVTMMPRWNLGPHVRCSHMIEPLGARWCLGICDITHLNLFLCNPY
Ga0321339_11093581	3300032551	Switchgrass Phyllosphere	LYSCSVNFGKKIMIIITFXNTVLDATIMHHIISCQWSMHGIASSSGIRRLLNGNASKYNIVGCLQFPLTYLAIAGIVGFPLLIYLVVMFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSV
Ga0214500_11025112	3300032589	Switchgrass Phyllosphere	MTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLINGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSE
Ga0214500_11780031	3300032589	Switchgrass Phyllosphere	SRIHRLTNGNAFECNIVGCLGFPLTYLVVAGTIGLLLLISLVVVFSHVTLMPRRNLGPHVRCSHMIEPLGARWCLGICDITHLNLFLCNPY
Ga0214497_10064642	3300032689	Switchgrass Phyllosphere	MTIITFLNTIIATIVMHYVISRHCSMHGVASSSVIRRLTNGYAFECNIVGCLRFPLNYLVASGTVGLLFLISVVVVFSHMTMMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNPLLYNLTSVLTSGPYSSV
Ga0214497_10961901	3300032689	Switchgrass Phyllosphere	LNMSKLNRFMTIITFLNTIIATIVMHHVISRHCSMHGVASSSVIRRLINGYAFECNIVGCLQFSLTYLVVAGTIGLLLLISLVVVFSHVTMTPRRNLDSHVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSE
Ga0214497_11119961	3300032689	Switchgrass Phyllosphere	EYSHCNNHASRHWSVHGVASSSRIHRLTNGYVSEYNFGLSSVSLIYLVAGTVGLLLSISLAVVFRYITLMPRRNLGSHVCCSHMIEPLGARWYLGICDITHLDSFLCNPY
Ga0314746_10092581	3300032758	Switchgrass Phyllosphere	MHGIASSSGIHGLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHMTLMPRRNLDSCVRCSHMIELLGAHWCLGMCDVTHCNPLLCNFISVLTSDLYSSI
Ga0314733_10243981	3300032761	Switchgrass Phyllosphere	MHGIASSSGIHGLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHMTLMPRRNLDSCVRCSHMIELLGAHWCLGMCDVTHCDPFLCNLTSVLSVDPSSRV
Ga0314725_10305541	3300032789	Switchgrass Phyllosphere	TFKDLYLYSCSVNLKKIMIIITFXNTVLDATIMHHIISCQWSMHGIASSSGIRRLLNGNASEYNIVGGLQFPLTYLPVTGTIGWLLLISLVVVFSHVTLMPRRNLDSRVRCSHMIELLGARWCLGMCDVTHCNLLLCNLTSVLTSDPYSSV
Ga0314731_10696021	3300032790	Switchgrass Phyllosphere	GIRRLLNGNASEYNIVGCLQFPLTYLAVVGTIGLLLLIFLVVVFSHVILMPRRNLDSRVRCCHMIELLGARWCLGMCDVTHCNSILCNLTSVLTSDPYSGV
Ga0314748_10152051	3300032791	Switchgrass Phyllosphere	LILLATLIPIFKNLYLHSCSVNFGYIKKIHDNNNFXNTVLDATIMHHIISCQWSMHGIASSSGIRRLLNGNASEYNIVGGLQFPLTYLPVTGTIGWLLLISLVVVFSHVTLMPXRNLDSRVRCSHMIELLGARWCLGICDVTHCNLLLCNLTSVLTSDPYSSV
Ga0314751_10391391	3300032889	Switchgrass Phyllosphere	SCINITSHHWSLHGVASSSGIRRLLNGNASEYNIVGCLQFPLTYLAVVGTIGLLLLIFLVVVFSHVILMPRRNLDSRVRCCHMIELLGARWCLGMCDVTHCNSILCNLTSVLTSDPYSSV
Ga0314734_10020061	3300032916	Switchgrass Phyllosphere	MIVITFGNTVLDATIMHHIISCQWSMHGIASSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHMTLMPRRNLDSCVRCSHMIELLGAHWCLGMCDVTHCNPLLCNFISVLTSDLYSSI
Ga0314722_10291252	3300032966	Switchgrass Phyllosphere	MIVITFGNTVLDATIMHHIISCQWSMHGIALSSGIHRLFNRNVSQYNIVGCLQFPLTYPAIAGTIGLLLLISLVVVFSHVTLMPRRNLDSCVRCSHMIELLGARWCLGMCDVTHCNPLLCNLTSVLTSDLYSCIGLTSFNRGKMGSVCTLHGVHHQLI
Ga0314755_10601342	3300033538	Switchgrass Phyllosphere	EYSHCNNHASRHWSVHGVASSSRIHRLTNGYVSEYNFGLSSVSLIYLVAGTVGLLLSISLAVVFSYITLMPRRNLGSHVCCSHMIEPLGARWYLGICDITHLDSFLCNPY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096451

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign