Metagenome / Metatranscriptome Family F096471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	69 residues
Representative Sequence	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN
Number of Associated Samples	79
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	79.81 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (65.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.98% β-sheet: 0.00% Coil/Unstructured: 34.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04964	Flp_Fap	58.65
PF00239	Resolvase	4.81
PF00590	TP_methylase	0.96
PF08241	Methyltransf_11	0.96
PF08238	Sel1	0.96
PF01451	LMWPc	0.96
PF03824	NicO	0.96
PF00582	Usp	0.96
PF10098	DUF2336	0.96
PF09349	OHCU_decarbox	0.96
PF02911	Formyl_trans_C	0.96
PF05860	TPS	0.96
PF07238	PilZ	0.96
PF00884	Sulfatase	0.96
PF13936	HTH_38	0.96
PF16901	DAO_C	0.96
PF05597	Phasin	0.96
PF00156	Pribosyltran	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	58.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	4.81
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	4.81
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	0.96
COG3210	Large exoprotein involved in heme utilization or adhesion	Intracellular trafficking, secretion, and vesicular transport [U]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.46 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.77 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.96 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10012832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5477	Open in IMG/M
3300004091\|Ga0062387_100116816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1471	Open in IMG/M
3300004092\|Ga0062389_104378927	Not Available	531	Open in IMG/M
3300004092\|Ga0062389_104451297	Not Available	527	Open in IMG/M
3300005541\|Ga0070733_10049167	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300009518\|Ga0116128_1032244	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300009521\|Ga0116222_1024668	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300009522\|Ga0116218_1322813	Not Available	690	Open in IMG/M
3300009523\|Ga0116221_1266191	Not Available	741	Open in IMG/M
3300009524\|Ga0116225_1077359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300009524\|Ga0116225_1400639	Not Available	610	Open in IMG/M
3300009547\|Ga0116136_1030496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1651	Open in IMG/M
3300009552\|Ga0116138_1114413	Not Available	746	Open in IMG/M
3300009629\|Ga0116119_1062615	Not Available	952	Open in IMG/M
3300009629\|Ga0116119_1135565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615	Open in IMG/M
3300009634\|Ga0116124_1149033	Not Available	654	Open in IMG/M
3300009637\|Ga0116118_1096981	Not Available	993	Open in IMG/M
3300009639\|Ga0116122_1139525	Not Available	774	Open in IMG/M
3300009640\|Ga0116126_1109019	Not Available	973	Open in IMG/M
3300009641\|Ga0116120_1162959	Not Available	715	Open in IMG/M
3300009644\|Ga0116121_1277022	Not Available	539	Open in IMG/M
3300009645\|Ga0116106_1095084	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300009672\|Ga0116215_1057459	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300009700\|Ga0116217_10079924	Not Available	2273	Open in IMG/M
3300009764\|Ga0116134_1066977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1340	Open in IMG/M
3300009764\|Ga0116134_1146895	Not Available	834	Open in IMG/M
3300009839\|Ga0116223_10099786	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300010343\|Ga0074044_10452424	Not Available	840	Open in IMG/M
3300010379\|Ga0136449_100001983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61917	Open in IMG/M
3300010379\|Ga0136449_100417208	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300010379\|Ga0136449_101727675	Not Available	941	Open in IMG/M
3300010379\|Ga0136449_103259686	Not Available	625	Open in IMG/M
3300010379\|Ga0136449_103624187	Not Available	585	Open in IMG/M
3300010379\|Ga0136449_104273468	Not Available	529	Open in IMG/M
3300014153\|Ga0181527_1329161	Not Available	596	Open in IMG/M
3300014156\|Ga0181518_10008299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8362	Open in IMG/M
3300014156\|Ga0181518_10347546	Not Available	727	Open in IMG/M
3300014158\|Ga0181521_10227069	Not Available	1001	Open in IMG/M
3300014159\|Ga0181530_10093680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1811	Open in IMG/M
3300014162\|Ga0181538_10086141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1874	Open in IMG/M
3300014165\|Ga0181523_10034284	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300014169\|Ga0181531_10116877	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300014200\|Ga0181526_10784517	Not Available	600	Open in IMG/M
3300014638\|Ga0181536_10382077	Not Available	634	Open in IMG/M
3300014657\|Ga0181522_10980911	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300016750\|Ga0181505_10290495	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300016750\|Ga0181505_10677001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3786	Open in IMG/M
3300017822\|Ga0187802_10329342	Not Available	598	Open in IMG/M
3300017925\|Ga0187856_1004068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9861	Open in IMG/M
3300017931\|Ga0187877_1390037	Not Available	526	Open in IMG/M
3300017940\|Ga0187853_10152500	Not Available	1105	Open in IMG/M
3300017942\|Ga0187808_10176573	Not Available	946	Open in IMG/M
3300017943\|Ga0187819_10235428	Not Available	1074	Open in IMG/M
3300017943\|Ga0187819_10399805	Not Available	790	Open in IMG/M
3300017946\|Ga0187879_10126679	Not Available	1453	Open in IMG/M
3300017946\|Ga0187879_10882562	Not Available	500	Open in IMG/M
3300017955\|Ga0187817_10148325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300017955\|Ga0187817_10877069	Not Available	574	Open in IMG/M
3300017970\|Ga0187783_10203836	Not Available	1452	Open in IMG/M
3300017970\|Ga0187783_10275031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1230	Open in IMG/M
3300017970\|Ga0187783_10747112	Not Available	706	Open in IMG/M
3300017975\|Ga0187782_10823870	Not Available	718	Open in IMG/M
3300017988\|Ga0181520_10058821	All Organisms → cellular organisms → Bacteria → Proteobacteria	3568	Open in IMG/M
3300018001\|Ga0187815_10400074	Not Available	585	Open in IMG/M
3300018004\|Ga0187865_1107737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1016	Open in IMG/M
3300018006\|Ga0187804_10184712	Not Available	887	Open in IMG/M
3300018016\|Ga0187880_1052776	Not Available	2164	Open in IMG/M
3300018024\|Ga0187881_10389970	Not Available	571	Open in IMG/M
3300018025\|Ga0187885_10058970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1947	Open in IMG/M
3300018026\|Ga0187857_10415057	Not Available	607	Open in IMG/M
3300018030\|Ga0187869_10632140	Not Available	504	Open in IMG/M
3300018037\|Ga0187883_10067847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1876	Open in IMG/M
3300018037\|Ga0187883_10467442	Not Available	649	Open in IMG/M
3300018042\|Ga0187871_10660191	Not Available	581	Open in IMG/M
3300018057\|Ga0187858_10474562	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300018062\|Ga0187784_10520883	Not Available	957	Open in IMG/M
3300018085\|Ga0187772_10500759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300018085\|Ga0187772_11428805	Not Available	514	Open in IMG/M
3300018086\|Ga0187769_10454085	Not Available	966	Open in IMG/M
3300018088\|Ga0187771_11041380	Not Available	694	Open in IMG/M
3300020582\|Ga0210395_10104447	Not Available	2096	Open in IMG/M
3300021180\|Ga0210396_11232627	Not Available	625	Open in IMG/M
3300021402\|Ga0210385_10239958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1329	Open in IMG/M
3300021407\|Ga0210383_10190951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1750	Open in IMG/M
3300021474\|Ga0210390_10264853	Not Available	1456	Open in IMG/M
3300021477\|Ga0210398_11600576	Not Available	505	Open in IMG/M
3300025459\|Ga0208689_1083140	Not Available	588	Open in IMG/M
3300025500\|Ga0208686_1077545	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300027570\|Ga0208043_1172094	Not Available	556	Open in IMG/M
3300027625\|Ga0208044_1075480	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300027641\|Ga0208827_1134568	Not Available	699	Open in IMG/M
3300029817\|Ga0247275_1096114	Not Available	787	Open in IMG/M
3300030707\|Ga0310038_10187781	Not Available	996	Open in IMG/M
3300031040\|Ga0265754_1000098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2388	Open in IMG/M
3300031708\|Ga0310686_102064568	Not Available	3514	Open in IMG/M
3300031708\|Ga0310686_107862782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2071	Open in IMG/M
3300031708\|Ga0310686_107900677	Not Available	522	Open in IMG/M
3300031708\|Ga0310686_108139898	All Organisms → cellular organisms → Bacteria → Proteobacteria	15288	Open in IMG/M
3300032160\|Ga0311301_10012634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26183	Open in IMG/M
3300032160\|Ga0311301_10357250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2279	Open in IMG/M
3300032160\|Ga0311301_11167293	Not Available	992	Open in IMG/M
3300032160\|Ga0311301_11999290	Not Available	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	53.85%
Terrestrial	Environmental → Terrestrial	46.15%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	53.85%
Soil	Environmental → Terrestrial → Soil	46.15%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	53.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.77%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	23.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100128325	3300000567	Peatlands Soil	MLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN*
Ga0062387_1001168163	3300004091	Bog Forest Soil	MLQQLNSLALPTAISIASFDATFFIAAQIFGLTEREVLLGVVAGAVGGLTVLVAVLWQSARNVAAQVSNTKVSNTQVTN*
Ga0062389_1043789272	3300004092	Bog Forest Soil	LNWLTLPTAISIASFDATFFVAAQIFGLTEREIVLGVAAGAVGGLSVLVAILWQSTRKVATEVTN*
Ga0062389_1044512972	3300004092	Bog Forest Soil	MLRQLNSLTFPAAISIASFEATFFVAAAIFGLTEREVLLGVVAGAVSGLCVLGAVLWQIAKNVAAQAAN*
Ga0070733_100491674	3300005541	Surface Soil	MLQQLNSLALPTAISIASFDATFFIAAQIFGLTDREVLLGVIAGAVGGLTVLVAVLWQSARNSARNVAPQATN*
Ga0116128_10322442	3300009518	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSS
Ga0116222_10246682	3300009521	Peatlands Soil	MNPAMVTSIAVFDSAQTKQGRRGTIMLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN*
Ga0116218_13228133	3300009522	Peatlands Soil	SFDATFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVATQVIN*
Ga0116221_12661912	3300009523	Peatlands Soil	MLRQLNLLAFPTAISIASFDATFFVFASIFGLTERELFLGVTAGAAGGLSVLGALLWQSARKVRTQAV*
Ga0116225_10773591	3300009524	Peatlands Soil	IASFVATFFVAARVLGLTQGEFFLGLGSGAAGGLRVLVGLLWQSSKSVATKVTN*
Ga0116225_14006392	3300009524	Peatlands Soil	MLRQLNLLAFPTAISIASFDATFFVFASIFSLTERELFLGVTAGAAGGLSVLGALLWQSARKVRTQAV*
Ga0116136_10304961	3300009547	Peatland	NLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRNAPTQVTN*
Ga0116138_11144132	3300009552	Peatland	MSRQLNLLALPTAISIASFEATFFVAARVLGLTKGELLLGLGSGAAGGLSVLVAQLWQSARSVATQIIN
Ga0116119_10626151	3300009629	Peatland	SFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN*
Ga0116119_11355651	3300009629	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAVTQVTN*
Ga0116124_11490331	3300009634	Peatland	LALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSSRSAATQVTN*
Ga0116118_10969811	3300009637	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN*
Ga0116122_11395252	3300009639	Peatland	VLRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGVMAGAAGGLSVLGALLWQSARNVPTQVTS*
Ga0116126_11090192	3300009640	Peatland	LRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGVMAGAAGGLSVLGALLWQSARNVPTQVTS*
Ga0116120_11629592	3300009641	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN*
Ga0116121_12770221	3300009644	Peatland	VLRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGVMAGAAGGLSVLVAVLRQSATNVVTQVIN*
Ga0116106_10950842	3300009645	Peatland	MLRQLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQVIN*
Ga0116215_10574591	3300009672	Peatlands Soil	MLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVAQLWQSARSVATD*
Ga0116217_100799241	3300009700	Peatlands Soil	MLRQLNLFALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN*
Ga0116134_10669773	3300009764	Peatland	MLRQLNLLALPTAISIASFAVTFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVAT
Ga0116134_11468951	3300009764	Peatland	QLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQVIN*
Ga0116223_100997862	3300009839	Peatlands Soil	MLRQLNLLALPTAISIASFVATFFVAACVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN*
Ga0074044_104524243	3300010343	Bog Forest Soil	MLKQLNLLTIPTAISIASFDATFFVFASIFGLTERELLLGVTAGAAGGLSVLGALLCQSARKVRSQAV*
Ga0136449_10000198310	3300010379	Peatlands Soil	MLRQLNRLTLPTAISIASFDATFFVIADLWGMTEQEMLLGLIAGGAGGLSVLVAVLWQSTRNVAIHASN*
Ga0136449_1004172081	3300010379	Peatlands Soil	MLRQLNLLTLPTAISIASFEATFFVVADVFGLTRGEILLGLGAGAAGGLSVLAAALWQSGRNLVTQVTN*
Ga0136449_1017276751	3300010379	Peatlands Soil	MLRQLNLLTLPTAISIASFEATFFVVANIVGLTRGEVLLGVIAGAAGGLSVLVAVLWQSARSVTAQVTN*
Ga0136449_1032596862	3300010379	Peatlands Soil	LRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN*
Ga0136449_1036241871	3300010379	Peatlands Soil	MLRQLNLLALPTAISIASFGATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVT
Ga0136449_1040617911	3300010379	Peatlands Soil	IASFDATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVALLWQSARSVAVLRR*
Ga0136449_1042734682	3300010379	Peatlands Soil	RRGTIMLRQLNLLALPTAISIASFDATFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVAPQV*
Ga0181527_13291612	3300014153	Bog	MLRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLW
Ga0181518_1000829912	3300014156	Bog	MLRQLNLLTLPTAISIASFEATFFVAADIFGLTERELLLGVTAGAAGGLSVLVALLWQSARSVPTQVTN*
Ga0181518_103475461	3300014156	Bog	AALPLRQAETTTLGGAIMLRQLNLLTLPTAVSIASFEATFFVIAEIFGLTSGEVLLGLSAGAAGGLSVLVAVLWQSARSVTAQVTN*
Ga0181521_102270693	3300014158	Bog	MLRQLNLLTLPTAVSIASFEATFFVIAEIFGLTSGEVLLGLSAGAAGGLSVLVAVLWQSARSVTAQVTN*
Ga0181530_100936802	3300014159	Bog	MLRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN*
Ga0181538_100861412	3300014162	Bog	MLRQLNLLALPTAISIASFEATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVALLWQSARSVAVLRR*
Ga0181523_100342843	3300014165	Bog	MLRQLNLLALPTAISIASFAVTFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVATQIIN*
Ga0181531_101168773	3300014169	Bog	MLPQLNLFTLPTAISIACFDAVFFVAADLFGMTAREIVLGVIAGGVSGLSVLVAVLWRSARKENVESIAGVSQ*
Ga0181526_107845171	3300014200	Bog	RGTIMLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN*
Ga0181536_103820771	3300014638	Bog	TAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAATQGTN*
Ga0181522_109809111	3300014657	Bog	HGGATMLPQLNLFTLPTAISIACFDAVFFVAADLFGMTAREIVLGVIAGGVSGLSVLVAVLWRSARKENVESIAGVSQ*
Ga0181505_102904951	3300016750	Peatland	RRGTIMLRQLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQVIN
Ga0181505_106770014	3300016750	Peatland	MLRQLNLLALPTAISIASFEATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVALLWQSARSVAVLRR
Ga0187802_103293421	3300017822	Freshwater Sediment	ISIASFDATFFVFASIFGLTERELLLGVTAGAAGGLSVLGALLWQSARKVRTQAAN
Ga0187856_10040688	3300017925	Peatland	MLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0187877_13900371	3300017931	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTRGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN
Ga0187853_101525003	3300017940	Peatland	RQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0187808_101765731	3300017942	Freshwater Sediment	MLRQLNLLALPTAISIASFDATFFVAARVVGLAQGELILGLGSGAAGGLSVLVAQLWQSSRSAATQVTN
Ga0187819_102354282	3300017943	Freshwater Sediment	MVAFIAVLTALQTKQGRRDTIVLRQLNLLALPTAISIASFDATFFVAARVVGLAQGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN
Ga0187819_103998052	3300017943	Freshwater Sediment	MLRQLNLLAFPTAISIASFDATFFVFASIFGLTERELLLGVTAGAAGGLSVLGALLWQSARKVRTQAAN
Ga0187879_101266793	3300017946	Peatland	MLRQLNLLALPTAISIASFAVTFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVATQIIN
Ga0187879_108825622	3300017946	Peatland	MSRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN
Ga0187817_101483251	3300017955	Freshwater Sediment	MLRQLNLLAFPTAISIASFDATFFVFASIFGLTERELFLGVTAGAAGGLSVLGALLWQSARKVRTQAAN
Ga0187817_108770691	3300017955	Freshwater Sediment	MLRQLNLLALPTAISIASFDATFFVAAHIFGLAQGELLLGLSAGAAGGLSVLVAILWQAGRSVATQSPTDIDPIGEID
Ga0187783_102038363	3300017970	Tropical Peatland	MLRQLSQLTLPIAISIASFEATFFVGGSILGLTEREVVLGILAGAAGGLSVIIAVLWQSARKVAPQATS
Ga0187783_102750311	3300017970	Tropical Peatland	MLEQLNRLTLPTAISIASFDATFFVGGSIFGLTEREVVLGVFAGAVGGLSVLVAVLCQSSRKVAPQVTS
Ga0187783_107471122	3300017970	Tropical Peatland	MLKQLNLLAFPTAISIASFDATFFVCASIFGFTAREIILGVTAAVTGGVTVLGTSLWQSARKVGTQVAN
Ga0187782_108238702	3300017975	Tropical Peatland	MLRQLSQLTLPIAISIASFEATFFVGGSIFGLTEREVVLGVLAGAAGGLSVIIAVLWQSARKVAPQAIS
Ga0181520_100588211	3300017988	Bog	MLPQLNLFTLPTAISIACFDAVFFVAADLFGMTAREIVLGVIAGGVSGLSVLVAVLWRSARKENVESIAGVSQ
Ga0187815_104000741	3300018001	Freshwater Sediment	KQGRRGTIMLRQLNLLALPTAISIASFDATFFVAARVVGLAQGELILGLGSGAAGGLSVLVALLWQSARSAATQVIN
Ga0187865_11077373	3300018004	Peatland	LNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0187804_101847122	3300018006	Freshwater Sediment	MLRQLNLLALPTAISIASFDATFFVAARVVGLAQGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTN
Ga0187880_10527764	3300018016	Peatland	MLRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN
Ga0187881_103899702	3300018024	Peatland	MLRQLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQIIN
Ga0187885_100589701	3300018025	Peatland	VLRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGIMAGAAGGLSVLGALLWQSARNVPTQVTS
Ga0187857_104150572	3300018026	Peatland	MLRQLHLLTLPIAISIASFDATFFSIRDIFGFTSREVLLGIIAGAAGGLSVLVAVLRQSATNVVTQVIN
Ga0187869_106321401	3300018030	Peatland	MLRQLNLLTLPTAISIASFEATFFVAADIFGLTERELLLGVTAGAAGGLCVLGAVLWQCVRNVPAQVTN
Ga0187883_100678473	3300018037	Peatland	MLRQLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSGAAGGLSVLVAQLWQSARSVATQIIN
Ga0187883_104674423	3300018037	Peatland	PQTKQELRGTIMLRQLNLLALPTAISIASFDATFFVAARVVGLTQGELILGLGSGATGGLSVLVALLWQSSRSAATQGTN
Ga0187871_106601912	3300018042	Peatland	PTPDKARTITIGGATVLRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGVMAGAAGGLSVLGALLWQSARNVPTQVTS
Ga0187858_104745621	3300018057	Peatland	MLRQLNLLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQVIN
Ga0187784_105208833	3300018062	Tropical Peatland	MLRELNLLTFPTAISIASFDATFFLCASIFGLTERELILGITAGAAGGLSVLGALLWQSARKVRTRAASEG
Ga0187772_105007593	3300018085	Tropical Peatland	LRQLNLFALPTAISIASFDATFFVAARVAGLTQGELLLGLGSGAVGGLSVLVALLWQSARSTTAQVTN
Ga0187772_114288051	3300018085	Tropical Peatland	ANPYRDGAGTIMLRELNLLTFPTAISIASFDATFFLCASIFGLTERELILGITAGAAGGLSVLGALLWQSARKVRTQAATEV
Ga0187769_104540852	3300018086	Tropical Peatland	MLRQLNLLALPTAISIASFDATFFVVANFLGLSRDEILLGIIAGAAGGLSVLVAMLWQAARNFATQVTS
Ga0187771_110413802	3300018088	Tropical Peatland	MLRQLNLLALPTAISIASFDATFFVVANFLGLSRDEILLGIIAGAAGGLSVLVAMLWQAARNVATQVTS
Ga0210395_101044473	3300020582	Soil	MLQQLNRLALPTAISIASFEAVFFVVGSFCDLTEREVVLGVLAGGVGGLSVLVAVLWQSTRKVALNATN
Ga0210396_112326272	3300021180	Soil	TLATERAIMLQQLNRLALPTAISIASFEAVFFVVGSFCDLTEREVVLGVLAGGVGGLSVLVAVLWQSTRKVALNATN
Ga0210385_102399582	3300021402	Soil	MLQQLNSLALPTAISIASFDATFFIAAQIFGLTDREVLLGVIAGAVGGLTVLVAVLWQSARNSARNVAPQATN
Ga0210383_101909512	3300021407	Soil	MLQQLNRLALPTAISIASFEAVFFVVGSFCDLTEREVVLGVLAGGVGGLSVLVAVLWQSKRKVALNATN
Ga0210390_102648533	3300021474	Soil	MLQQLNRLALPTAISIASFEAVFFVVGSFCDLTEREVVLGVLAGGVGGLSVLVAVLWQSTREGRAQRDQLIFAFQ
Ga0210398_116005762	3300021477	Soil	MLRQLKQLSLPTAISIASFDATFFVVAGIWGLTAQEVLLGLVAAGAGGVSVLAAVLWQSARNVPIHAPN
Ga0208689_10831402	3300025459	Peatland	VLRQLNLLTLPTAISIASFDATFFIFADIFGLTERELLLGVMAGAAGGLSVLGALLWQSARNVPTQVTS
Ga0208686_10775452	3300025500	Peatland	LLALPTAISIASFDGTFFVAARVLGFTQGELLLGLGSVAAGGLSVLVALLWQSARSVATQVIN
Ga0208043_11720941	3300027570	Peatlands Soil	QRRRGTIMLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0208044_10754802	3300027625	Peatlands Soil	MLRQLNLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQ
Ga0208827_11345681	3300027641	Peatlands Soil	MLRQLNLLAFPTAISIASFDATFFVFASIFGLTERELFLGVTAGAAGGLSVLGALLWQSARKVRTQAV
Ga0247275_10961143	3300029817	Soil	IASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0310038_101877812	3300030707	Peatlands Soil	NLLALPTAISIASFVATFFVAARVLGLTQGELLLGLGSGAAGGLSVLVGLLWQSSKSVATKVTN
Ga0265754_10000984	3300031040	Soil	LRQLNLLALPTAISIASFDATFFVAARVVGLTQSELILGLGSGAAGGLSVLVALLWQSSRSAVTQVTN
Ga0310686_1020645682	3300031708	Soil	MLQQLNSLALPTAISIASFDATFFIAAQIFGLTEREVLLGVVAGAVGGLTVLVAVLWQSARNVVAQVSNTQVSDTQVTNRHRA
Ga0310686_1078627822	3300031708	Soil	MLQQLNSLALPTAISIASFDSTFFIAAQIFGLTDREVLLGVIAGAVGGLTVLVAVLWQSARNSARNVAPQATN
Ga0310686_1079006771	3300031708	Soil	MLQQLNRLTLPTAISIASFEATFFVAGEIFGLTARDVVLGVIAGAVGGLTVLVAVLWQSARNVSPRVAN
Ga0310686_10813989812	3300031708	Soil	MGAIMLQQLNRLALPTAISIASFEAVFFVVGSIFDLTEREVVLGVLAGGVGGLSVLVAVLWKSARKVALSATN
Ga0311301_100126346	3300032160	Peatlands Soil	MLRQLNRLTLPTAISIASFDATFFVIADLWGMTEQEMLLGLIAGGAGGLSVLVAVLWQSTRNVAIHASN
Ga0311301_103572504	3300032160	Peatlands Soil	MLRQLNLLTLPTAISIASFEATFFVVADVFGLTRGEILLGLGAGAAGGLSVLAAALWQSGRNLVTQVTN
Ga0311301_111672933	3300032160	Peatlands Soil	MLRQLNLLTLPTAISIASFEATFFVVANIVGLTRGEVLLGVIAGAAGGLSVLVAVLWQSARSVTAQVTN
Ga0311301_119992901	3300032160	Peatlands Soil	MLRQLNLFALPTAISIASFGATFFVAARVVGLTQGELILGLGSGAAGGLSVLVALLWQSSRSAATQVTMMPIL
Ga0335078_105871102	3300032805	Soil	MLQQLNRLTLPAAISIASFDATFFVAAQIFGLTDREVILGIVAGAVGGLSVLAAILWQSVRNVVAPAAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences