Metagenome / Metatranscriptome Family F096497

Basic Information
Family ID	F096497
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Number of Associated Samples	57
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (64.423 % of family members)
Environment Ontology (ENVO)	Unclassified (72.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (59.615 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.42% β-sheet: 0.00% Coil/Unstructured: 31.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01138	RNase_PH	4.81
PF00106	adh_short	1.92
PF06418	CTP_synth_N	1.92
PF00694	Aconitase_C	1.92
PF12796	Ank_2	0.96
PF12777	MT	0.96
PF10229	MMADHC	0.96
PF08030	NAD_binding_6	0.96
PF12848	ABC_tran_Xtn	0.96
PF01148	CTP_transf_1	0.96
PF02798	GST_N	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	4.81
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	4.81
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	4.81
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	1.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.54%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	13.46%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	67.31%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	13.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.81%
Coastal	Environmental → Aquatic → Marine → Coastal	1.92%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.96%
Strait	Environmental → Aquatic → Marine → Strait	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	67.31%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	13.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	64.42%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	12.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.88%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.88%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.92%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	1.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.96%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.96%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300002153	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome	Environmental	Open in IMG/M
3300003908	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012417	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300022833	Saline water microbial communities from Ace Lake, Antarctica - #292	Environmental	Open in IMG/M
3300022842	Saline water microbial communities from Ace Lake, Antarctica - #46	Environmental	Open in IMG/M
3300022844	Saline water microbial communities from Ace Lake, Antarctica - #1163	Environmental	Open in IMG/M
3300022847	Saline water microbial communities from Ace Lake, Antarctica - #48	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300023243	Saline water microbial communities from Ace Lake, Antarctica - #3	Environmental	Open in IMG/M
3300023429	Saline water microbial communities from Ace Lake, Antarctica - #1696	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300030721	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1117_20m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030725	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - AG5_1298_20m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031579	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1120_Surface (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031637	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1	Environmental	Open in IMG/M
3300031676	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_20m	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M
3300031706	Marine microbial communities from David Island wharf, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031848	Marine microbial communities from water near the shore, Antarctic Ocean - #3	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20151J14362_101154401	3300001346	Pelagic Marine	YVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS*
JGI24540J26637_101629062	3300002153	Marine	NEGAINVLRKAYVSSEMDKVGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSTINVQRLRREVQPTG*
JGI26085J52751_10285451	3300003908	Marine	VWIFKLSETSGALFGKSGMSTFVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS*
Ga0075109_10812501	3300005912	Saline Lake	GNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG*
Ga0114995_102027992	3300009172	Marine	MSTFVGNMLDPIRQPRGNEGVINILRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVR
Ga0114995_102219292	3300009172	Marine	NGGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG*
Ga0114996_112768252	3300009173	Marine	MSSFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG*
Ga0114998_100427851	3300009422	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYTYVRDLAKDGAINVQRLRRDVQPTG*
Ga0114998_100685402	3300009422	Marine	MTNGFGELFMLDKIGQPRGNEGAIIGAIIVLRKFYVSSEMDKAGAGMTAEERQALALHMRHSVNTSYKYVRDLAKDRAINVQLSRREVQPTG*
Ga0114998_106421941	3300009422	Marine	LETEKTSRTLFGRSGMSTFVGKMLDAIGQPRGNKGAINVLRKSYVSSEMDKAGTAMTAEERQALAFHMRHSVNTSYKYVRDLAKD
Ga0114997_104174351	3300009425	Marine	ARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDGAINVQRLRREVQPTG*
Ga0115007_1000063328	3300009441	Marine	LDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115007_108907582	3300009441	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0115007_112712041	3300009441	Marine	DAIGQSRGNEGAINVLRKSYVSSEMDKAGVGMTAEERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREVQPTG*
Ga0115003_100166191	3300009512	Marine	RKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115003_101122921	3300009512	Marine	LETDETSGTLFGKSGMSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAKDRAINVQRLRREVQPTG*
Ga0115004_106221751	3300009526	Marine	TFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDAAINVQRLRREVQPTS*
Ga0115101_11897021	3300009592	Marine	SGTLFGKSGMSTFVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD*
Ga0115000_106788281	3300009705	Marine	MLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSKKYVRDLTKDGAINVQRLRREV*
Ga0115001_100722173	3300009785	Marine	VPILDGDVIMTNGFGELFMLDKIGQPRGNEGAIIGAIIVLRKFYVSSEMDKAGAGMTAEERQALALHMRHSVNTSYKYVRDLAKDRAINVQLSRREVQPTG*
Ga0115001_103736523	3300009785	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115001_107459241	3300009785	Marine	TLFGKSGMSTFVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV*
Ga0115001_108775912	3300009785	Marine	GKSGMSTFVGNMLDAIGQPRGNEGAINVLRESYVSSEMDKAGAGMTADERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0133547_102043372	3300010883	Marine	MSTFVGKMLDAIGQPRGNKGAINVLRKSYVSSEMDKAGTAMTAEERQALAFHMRHSVNTSYKYVRDLAKDRGINERLRREVQPTG*
Ga0138262_14846151	3300012417	Polar Marine	VLRESYVSSEMDKAGAGMTADERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0138261_17713781	3300012418	Polar Marine	GNEGAINFLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAINVQRLRREVQPTG*
Ga0182090_11409222	3300016797	Salt Marsh	MSTFVGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181388_11702251	3300017724	Seawater	RGNEGAINVLLKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD
Ga0181569_102601861	3300017986	Salt Marsh	MLDAIGQPRGNEGAINVLRKSYVSCEMDKAGAGMTAEERQDLAFHMRHSVNTSYKYVRDLAKDKAIDVQRLRREVRPTS
Ga0181600_103561522	3300018036	Salt Marsh	MSTFVGTMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181601_103068353	3300018041	Salt Marsh	VGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181561_100083142	3300018410	Salt Marsh	MLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181558_100163066	3300018417	Salt Marsh	PRGNEDAINVLRKSCVSSEMDKAGAGMTSEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0222645_1014352	3300022833	Saline Water	MSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0222645_1032782	3300022833	Saline Water	MSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAKDRAINVQRLRREVQPTG
Ga0222645_1249191	3300022833	Saline Water	NEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDRAINVQRLRREVQPTG
Ga0222632_10690811	3300022842	Saline Water	FVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQRLQREVQPTG
Ga0222687_10443601	3300022844	Saline Water	KTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10305621	3300022847	Saline Water	TFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10326261	3300022847	Saline Water	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10388181	3300022847	Saline Water	KSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYVRKLAKDGAINVQRLRREVQPTG
Ga0222633_10433161	3300022847	Saline Water	TINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQHLRREVQPTG
Ga0255771_10122667	3300022900	Salt Marsh	SGTLFGKSGMSTFVGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0222630_10029711	3300023243	Saline Water	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSFKYVRDLAKDRAINVQRLRREVQPTG
Ga0222630_10519211	3300023243	Saline Water	FGKSGMSTFVGNMLDAIGQSRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222630_10613701	3300023243	Saline Water	GAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQHLRREVQPTG
Ga0222710_10799541	3300023429	Saline Water	ARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209138_10989051	3300025617	Marine	LRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS
Ga0209666_11901451	3300025870	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLDAIEQSRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0209710_10439814	3300027687	Marine	INVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRRE
Ga0209710_10871652	3300027687	Marine	GNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209710_12697452	3300027687	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209710_12717111	3300027687	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDSTINVQRLRREVQPTG
Ga0209192_101351801	3300027752	Marine	MSTFVGNMLDPIRQPRGNEGVINILRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRYLAKDR
Ga0209192_101397781	3300027752	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0209192_101642951	3300027752	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDEAINVQRLRREVQPTG
Ga0209192_102950191	3300027752	Marine	GKSGMSTFVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV
Ga0209192_103407061	3300027752	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLNAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTS
Ga0209709_104003021	3300027779	Marine	SGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDGAINVQRLRREVQPTG
Ga0209502_1000010986	3300027780	Marine	MSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209502_100542403	3300027780	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0209502_102415271	3300027780	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209502_104080071	3300027780	Marine	LLETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209711_100586553	3300027788	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209711_101509661	3300027788	Marine	MSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAK
Ga0209830_100002671	3300027791	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_100133174	3300027791	Marine	ETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209830_101593472	3300027791	Marine	RGNGGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_102308231	3300027791	Marine	FGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_102682421	3300027791	Marine	RGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_103779261	3300027791	Marine	ETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDSTINVQRLRREVQPTG
Ga0209830_104209671	3300027791	Marine	FVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV
Ga0209302_102701811	3300027810	Marine	GQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0257106_10320801	3300028194	Marine	MSTFVGNMLDAIGQPRGNEGAINVLRKSCVSSEMDKAGTGMTAEERQALSFHMRNSVNTSYKYVRDLAKDRVINVLRLRREVQLTG
Ga0257106_11023841	3300028194	Marine	YVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0257106_11161031	3300028194	Marine	RGNEGAINVHRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0308133_10377182	3300030721	Marine	GMSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0308128_10484152	3300030725	Marine	YVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0307488_105408851	3300031519	Sackhole Brine	YVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDVAINVQRLRREVQPTG
Ga0307488_108316702	3300031519	Sackhole Brine	YVSSEMDKAGAGMTTDERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0308134_10525851	3300031579	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0308134_11173211	3300031579	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302137_10549902	3300031588	Marine	KTSGTLFGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302131_10080844	3300031594	Marine	LETDKTSGTLFGKYGMSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0302116_10035712	3300031597	Marine	MSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRIRREVQPTS
Ga0302116_11388761	3300031597	Marine	GMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVRPTG
Ga0302116_11414481	3300031597	Marine	LDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREV
Ga0302114_101377131	3300031621	Marine	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAQDGAINVQRLRREVQPTG
Ga0302114_103432401	3300031621	Marine	FGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302126_101775861	3300031622	Marine	GAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_102360612	3300031622	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_102758381	3300031622	Marine	INVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_103260831	3300031622	Marine	SGTLFGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302121_101020571	3300031626	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLNAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRRDVQPTG
Ga0302121_101325801	3300031626	Marine	VSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDRAINVQRVRREVQPTG
Ga0302138_100057526	3300031637	Marine	DAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302138_100067264	3300031637	Marine	IGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0302138_101120901	3300031637	Marine	MLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302138_102132242	3300031637	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0302136_11352151	3300031676	Marine	FGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302130_12058441	3300031700	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0307997_100404712	3300031706	Marine	RKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSFKYVRDLAKDRAINVQRLRREVQPT
Ga0308000_104311231	3300031848	Marine	GMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTIDVQRLRHEVQPTS
Ga0315320_107251461	3300031851	Seawater	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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