NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096523

Metagenome Family F096523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096523
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 51 residues
Representative Sequence MYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILS
Number of Associated Samples 20
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.24 %
% of genes near scaffold ends (potentially truncated) 21.15 %
% of genes from short scaffolds (< 2000 bps) 20.19 %
Associated GOLD sequencing projects 11
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.577 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine
(83.654 % of family members)
Environment Ontology (ENVO) Unclassified
(85.577 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Surface (saline)
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 64.58%    Coil/Unstructured: 35.42%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01370Epimerase 3.92
PF06803DUF1232 3.92
PF13585CHU_C 2.94
PF13688Reprolysin_5 2.94
PF06325PrmA 1.96
PF027373HCDH_N 1.96
PF08546ApbA_C 1.96
PF09721Exosortase_EpsH 1.96
PF00486Trans_reg_C 1.96
PF00117GATase 1.96
PF01832Glucosaminidase 1.96
PF02780Transketolase_C 1.96
PF02498Bro-N 1.96
PF13715CarbopepD_reg_2 1.96
PF01894UPF0047 1.96
PF13641Glyco_tranf_2_3 1.96
PF02738MoCoBD_1 1.96
PF02515CoA_transf_3 1.96
PF04079SMC_ScpB 0.98
PF01944SpoIIM 0.98
PF02800Gp_dh_C 0.98
PF07582Obsolete Pfam Family 0.98
PF04250DUF429 0.98
PF02518HATPase_c 0.98
PF02987LEA_4 0.98
PF13895Ig_2 0.98
PF00483NTP_transferase 0.98
PF01433Peptidase_M1 0.98
PF00520Ion_trans 0.98
PF02609Exonuc_VII_S 0.98
PF00106adh_short 0.98
PF02627CMD 0.98
PF00730HhH-GPD 0.98
PF04984Phage_sheath_1 0.98
PF02812ELFV_dehydrog_N 0.98
PF11751PorP_SprF 0.98
PF13432TPR_16 0.98
PF00293NUDIX 0.98
PF06508QueC 0.98
PF00534Glycos_transf_1 0.98
PF00682HMGL-like 0.98
PF12725DUF3810 0.98
PF02548Pantoate_transf 0.98
PF01564Spermine_synth 0.98
PF00491Arginase 0.98
PF13439Glyco_transf_4 0.98
PF02922CBM_48 0.98
PF01746tRNA_m1G_MT 0.98
PF02421FeoB_N 0.98
PF11013DUF2851 0.98
PF064393keto-disac_hyd 0.98
PF13180PDZ_2 0.98
PF02540NAD_synthase 0.98
PF00334NDK 0.98
PF00970FAD_binding_6 0.98
PF14903WG_beta_rep 0.98
PF05742TANGO2 0.98
PF00801PKD 0.98
PF00128Alpha-amylase 0.98
PF01850PIN 0.98
PF03098An_peroxidase 0.98
PF02803Thiolase_C 0.98
PF07995GSDH 0.98
PF076987TM-7TMR_HD 0.98
PF03883H2O2_YaaD 0.98
PF12437GSIII_N 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG3339Uncharacterized membrane protein YkvA, DUF1232 familyFunction unknown [S] 3.92
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 1.96
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.96
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 1.96
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 1.96
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.96
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.96
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.96
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 1.96
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 1.96
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 1.96
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 1.96
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 1.96
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 1.96
COG3617Prophage antirepressorMobilome: prophages, transposons [X] 1.96
COG3897Protein N-terminal and lysine N-methylase, NNT1/EFM7 familyPosttranslational modification, protein turnover, chaperones [O] 1.96
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 0.98
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.98
COG0057Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenaseCarbohydrate transport and metabolism [G] 0.98
COG0105Nucleoside diphosphate kinaseNucleotide transport and metabolism [F] 0.98
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.98
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.98
COG0177Endonuclease IIIReplication, recombination and repair [L] 0.98
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 0.98
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.98
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.98
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 0.98
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 0.98
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.98
COG0370Fe2+ transporter FeoBInorganic ion transport and metabolism [P] 0.98
COG0413Ketopantoate hydroxymethyltransferaseCoenzyme transport and metabolism [H] 0.98
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.98
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.98
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.98
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.98
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.98
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.98
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 0.98
COG1300Stage II sporulation protein SpoIIM, component of the engulfment complexCell cycle control, cell division, chromosome partitioning [D] 0.98
COG1386Chromosome segregation and condensation protein ScpBTranscription [K] 0.98
COG1480Cyclic di-AMP-specific phosphodiesterase PgpH, HD superfamilySignal transduction mechanisms [T] 0.98
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.98
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.98
COG1722Exonuclease VII small subunitReplication, recombination and repair [L] 0.98
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.98
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.98
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 0.98
COG2410Predicted nuclease (RNAse H fold)General function prediction only [R] 0.98
COG3022DNA-binding protein YaaA associated with the oxidative stress responseReplication, recombination and repair [L] 0.98
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 0.98
COG3332Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motifGeneral function prediction only [R] 0.98
COG3497Phage tail sheath protein FIMobilome: prophages, transposons [X] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.58 %
UnclassifiedrootN/A14.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005647|Ga0079203_1065565All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300005647|Ga0079203_1071432Not Available1239Open in IMG/M
3300005647|Ga0079203_1110417All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium870Open in IMG/M
3300005647|Ga0079203_1136159Not Available735Open in IMG/M
3300005651|Ga0079202_10007553All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4560Open in IMG/M
3300005651|Ga0079202_10009825All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Haliscomenobacteraceae4002Open in IMG/M
3300005651|Ga0079202_10012945All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales3468Open in IMG/M
3300005651|Ga0079202_10015369All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3170Open in IMG/M
3300005651|Ga0079202_10073801Not Available1250Open in IMG/M
3300005651|Ga0079202_10075513All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1232Open in IMG/M
3300005651|Ga0079202_10103085All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes994Open in IMG/M
3300005651|Ga0079202_10118684All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300005651|Ga0079202_10126367Not Available861Open in IMG/M
3300005651|Ga0079202_10241953Not Available527Open in IMG/M
3300005654|Ga0079204_10005562All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae7311Open in IMG/M
3300009072|Ga0115030_1113061All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium504Open in IMG/M
3300009073|Ga0114957_1007304All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella → Lewinella agarilytica8596Open in IMG/M
3300009073|Ga0114957_1010087All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae6815Open in IMG/M
3300009073|Ga0114957_1018722All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae4204Open in IMG/M
3300009073|Ga0114957_1027881All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3025Open in IMG/M
3300009073|Ga0114957_1031807All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae2714Open in IMG/M
3300009073|Ga0114957_1036134All Organisms → cellular organisms → Bacteria2443Open in IMG/M
3300009073|Ga0114957_1112312All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes963Open in IMG/M
3300009192|Ga0114954_1001450All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Haliscomenobacteraceae6421Open in IMG/M
3300009192|Ga0114954_1003846All Organisms → cellular organisms → Bacteria3222Open in IMG/M
3300009192|Ga0114954_1004049All Organisms → cellular organisms → Bacteria3105Open in IMG/M
3300009410|Ga0114955_1009688All Organisms → cellular organisms → Bacteria3705Open in IMG/M
3300009415|Ga0115029_1005008All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes6705Open in IMG/M
3300009415|Ga0115029_1006598All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5663Open in IMG/M
3300009415|Ga0115029_1007708All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5137Open in IMG/M
3300009415|Ga0115029_1010005All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Haliscomenobacteraceae → Phaeodactylibacter → Phaeodactylibacter xiamenensis4330Open in IMG/M
3300009415|Ga0115029_1018941All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae2810Open in IMG/M
3300009415|Ga0115029_1021307All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2569Open in IMG/M
3300009417|Ga0114953_1032987All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2256Open in IMG/M
3300009421|Ga0114952_1110201All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes949Open in IMG/M
3300009439|Ga0115031_1003231All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes12123Open in IMG/M
3300009439|Ga0115031_1017230Not Available4567Open in IMG/M
3300009439|Ga0115031_1034525All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales2748Open in IMG/M
3300009439|Ga0115031_1042269All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium2350Open in IMG/M
3300009446|Ga0114956_1027224Not Available3368Open in IMG/M
3300009446|Ga0114956_1032939All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Haliscomenobacteraceae → Phaeodactylibacter → Phaeodactylibacter xiamenensis2969Open in IMG/M
3300009446|Ga0114956_1036426All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2769Open in IMG/M
3300026840|Ga0209595_100205All Organisms → cellular organisms → Bacteria20218Open in IMG/M
3300026840|Ga0209595_100223All Organisms → cellular organisms → Bacteria19405Open in IMG/M
3300026840|Ga0209595_100264All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes18390Open in IMG/M
3300026840|Ga0209595_100989All Organisms → cellular organisms → Bacteria8899Open in IMG/M
3300026840|Ga0209595_101095All Organisms → cellular organisms → Bacteria8305Open in IMG/M
3300026840|Ga0209595_101349All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales7261Open in IMG/M
3300026840|Ga0209595_102055All Organisms → cellular organisms → Bacteria5272Open in IMG/M
3300026840|Ga0209595_102055All Organisms → cellular organisms → Bacteria5272Open in IMG/M
3300026840|Ga0209595_102950All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3863Open in IMG/M
3300026840|Ga0209595_103653All Organisms → cellular organisms → Bacteria3157Open in IMG/M
3300026840|Ga0209595_105496All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2101Open in IMG/M
3300027009|Ga0209093_1000395All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes23174Open in IMG/M
3300027009|Ga0209093_1003074All Organisms → cellular organisms → Bacteria8892Open in IMG/M
3300027009|Ga0209093_1003622All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales7987Open in IMG/M
3300027009|Ga0209093_1006470All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales5276Open in IMG/M
3300027009|Ga0209093_1011170Not Available3214Open in IMG/M
3300027009|Ga0209093_1011261All Organisms → cellular organisms → Bacteria3183Open in IMG/M
3300027009|Ga0209093_1011351All Organisms → cellular organisms → Bacteria3157Open in IMG/M
3300027009|Ga0209093_1013106Not Available2718Open in IMG/M
3300027009|Ga0209093_1019529Not Available1728Open in IMG/M
3300027009|Ga0209093_1019644All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1715Open in IMG/M
3300027009|Ga0209093_1056792Not Available525Open in IMG/M
3300027028|Ga0209295_1000520All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes18228Open in IMG/M
3300027028|Ga0209295_1001962All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales7375Open in IMG/M
3300027028|Ga0209295_1002587All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales6362Open in IMG/M
3300027028|Ga0209295_1002587All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales6362Open in IMG/M
3300027028|Ga0209295_1012595All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-932621Open in IMG/M
3300027262|Ga0209303_1000107All Organisms → cellular organisms → Bacteria99424Open in IMG/M
3300027262|Ga0209303_1000116All Organisms → cellular organisms → Bacteria93680Open in IMG/M
3300027262|Ga0209303_1000587All Organisms → cellular organisms → Bacteria27432Open in IMG/M
3300027262|Ga0209303_1000831All Organisms → cellular organisms → Bacteria22137Open in IMG/M
3300027262|Ga0209303_1001194All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes16915Open in IMG/M
3300027262|Ga0209303_1002047All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes11105Open in IMG/M
3300027262|Ga0209303_1004029All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes6579Open in IMG/M
3300027262|Ga0209303_1051828All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes971Open in IMG/M
3300027325|Ga0209186_1007452All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales6682Open in IMG/M
3300027325|Ga0209186_1010050All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales5409Open in IMG/M
3300027509|Ga0209187_1001921All Organisms → cellular organisms → Bacteria21690Open in IMG/M
3300027509|Ga0209187_1003220All Organisms → cellular organisms → Bacteria13979Open in IMG/M
3300027509|Ga0209187_1004229All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales11135Open in IMG/M
3300027509|Ga0209187_1005650All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes8660Open in IMG/M
3300027509|Ga0209187_1008990All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5951Open in IMG/M
3300027509|Ga0209187_1009022All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales5929Open in IMG/M
3300027509|Ga0209187_1009554All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5660Open in IMG/M
3300027509|Ga0209187_1012230All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4641Open in IMG/M
3300027509|Ga0209187_1012459All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4577Open in IMG/M
3300027509|Ga0209187_1012538All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Haliscomenobacteraceae → Phaeodactylibacter → Phaeodactylibacter xiamenensis4552Open in IMG/M
3300027509|Ga0209187_1014344All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4073Open in IMG/M
3300027509|Ga0209187_1071279All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes973Open in IMG/M
3300027509|Ga0209187_1146592Not Available517Open in IMG/M
3300027554|Ga0209831_1002485All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes15996Open in IMG/M
3300027554|Ga0209831_1003082All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes14020Open in IMG/M
3300027554|Ga0209831_1013250All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales5007Open in IMG/M
3300027554|Ga0209831_1027441All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2766Open in IMG/M
3300027623|Ga0209828_1009684All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5461Open in IMG/M
3300027623|Ga0209828_1011233All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4847Open in IMG/M
3300027623|Ga0209828_1020421All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3047Open in IMG/M
3300027623|Ga0209828_1052112All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300027623|Ga0209828_1062964All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1330Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineHost-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine83.65%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine16.35%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005647Marine algae microbial communities from Bantry Bay - Bantry Bay, IrelandEnvironmentalOpen in IMG/M
3300005651Marine algae microbial communities from Blueberry Hill - Blueberry Hill, MaineEnvironmentalOpen in IMG/M
3300005654Porphyra Blade Metagenome Co-AssemblyEnvironmentalOpen in IMG/M
3300009072Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaGHost-AssociatedOpen in IMG/M
3300009073Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaGHost-AssociatedOpen in IMG/M
3300009192Marine algal microbial communities from Porto, Portugal - Porto_4 metaGHost-AssociatedOpen in IMG/M
3300009410Marine algal microbial communities from Porto, Portugal - Porto_5 metaGHost-AssociatedOpen in IMG/M
3300009415Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaGHost-AssociatedOpen in IMG/M
3300009417Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaGHost-AssociatedOpen in IMG/M
3300009421Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaGHost-AssociatedOpen in IMG/M
3300009439Marine algal microbial communities from Maine, USA - Maine_Asex4_metaGHost-AssociatedOpen in IMG/M
3300009446Marine algal microbial communities from Maine, USA - Maine_Asex2 metaGHost-AssociatedOpen in IMG/M
3300026840Marine algal microbial communities from Porto, Portugal - Porto_4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027009Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027028Marine algal microbial communities from Porto, Portugal - Porto_5 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027262Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027325Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027509Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027554Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027623Marine algal microbial communities from Maine, USA - Maine_Asex2 metaG (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0079203_101062023300005647MarineIFSLDEPNLTRILTVFKKNLVKYKGKRTSREYTFILFLILI*
Ga0079203_106556533300005647MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILS
Ga0079203_107143223300005647MarineMYILRVVIFSLDEPNLMRITGYLSRILVKYKVKRTSREYTFILFLILKGKFVTLPSY*
Ga0079203_111041723300005647MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTGREYAFILFLILKRKERVKI*
Ga0079203_113615923300005647MarineMYILRVVIFSLDEPNLTRILIVFKESLVKYKGKRTSREYTFILFLML*
Ga0079202_1000755313300005651MarineMYILRIVIFSLDEPNLTRILTVFKESLVKYKGKRTSREYTFILFLILEVKYW*
Ga0079202_1000982583300005651MarineMYILRAVIFFLDEPNLTRILTVFKENLVKYKGKITSREYTFNFFH*
Ga0079202_1001294523300005651MarineMYILRIVIFSLDEPNLTRILTVFKEKLVKYKGKRTSREYTFILFLILNWNGFFYFGYK*
Ga0079202_1001536913300005651MarineMYILRVVIFYLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILS
Ga0079202_1007380123300005651MarineMYILRAVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLIFIKNKRQK*
Ga0079202_1007551323300005651MarineFFLDELNLTRILTVFKEDLVKYKGKRTSREYAFILFLIPM*
Ga0079202_1010308513300005651MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKEKRTSRKYAFSLTYY*
Ga0079202_1011868413300005651MarineRVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILLLILSFEGVAN*
Ga0079202_1012636723300005651MarineFYLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILSI*
Ga0079202_1024195313300005651MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLI
Ga0079204_1000556213300005654MarineMYILRVVIFSLNEPNLTRILTVFKENLVKYKGKRTSREYTFILFLI
Ga0079204_1022263123300005654MarineMYILRIVIFSLDEPNLTRILPVFKENLVKYKGKRTSREYTFI*
Ga0115030_111306113300009072MarineMYILRVVIFSLDEPNLTQILTVSKENLVKYKGKRTSREYTFILFLILSTLFHKFIYF
Ga0114957_100730443300009073MarineMYILRVVIFSLDESNLTRILTVFKENLVKYKGKRTSREFTFILFLILR*
Ga0114957_101008733300009073MarineMYILRVIIFSLDEPNLTRILTVFKENLVKYKGKRASREYTFIFFLFPNRILSKFLFIRV*
Ga0114957_101872233300009073MarineMYILRVVIFSLDEPNLTQIITVFKENLVKYKGKRTSREYTFILFLILRDEKINN
Ga0114957_102788133300009073MarineMYILRVVIFSLDKSNLRRILTVFKENLVKYKGKRISREYTFILFLILILSWVDV*
Ga0114957_103180723300009073MarineMYILRVVIFYLDEPNLTRILTVFKENLVKYKGKKTSREYTFILFLILSI*
Ga0114957_103613423300009073MarineMHILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLIFK*
Ga0114957_111231233300009073MarineMYILRVIIFSLDEPNLTRILTVFKENLVKYKGKKTSQDVMFIVFHP*
Ga0114954_100145013300009192MarineMYILRVVIFFLDEPNLTRILTVFKENLVKCKGKRKSRECTFILFLILSERN*
Ga0114954_100384643300009192MarineMYILRVVIFSLDEPNLTRILIAFKENLVKCKGKGTSREYTFIKALFLSSKSI*
Ga0114954_100404933300009192MarineMYILRVVIFSLDESNLRRILTVFKENLVKYKGKRTSREYTFILFLILILSWVDV*
Ga0114955_100968863300009410MarineMYILRVVIFSLDKPNLTRILTVFKENLVKYRGKRTSREYTFILFLILTAKLQR
Ga0115029_100500843300009415MarineMYILRIVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILNY*
Ga0115029_100659873300009415MarineMYILRVVIFSLGEPNLTRILTAFKENLVKYKGKRTSREYTFILFLILSIKVVNTFFEM*
Ga0115029_100770853300009415MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTTREYTLILFLVLSQ*
Ga0115029_101000513300009415MarineMYILRIVVFSLDEPNLMRILTVFKENLVKYKEKRTSQDVVFIVFSFLSEK*
Ga0115029_101894123300009415MarineMYILRVVIFYLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILSI*
Ga0115029_102130723300009415MarineLRVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILLLILSFEGVAN*
Ga0114953_103298713300009417MarineMYILRAVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFI
Ga0114952_111020113300009421MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKKTSQDVMFIVFHP*
Ga0115031_100323193300009439MarineMYILRVVIFSLDEPNLTRILTVFKENLVKCKGKRTSRECTFILSLLSHFDND*
Ga0115031_101723023300009439MarineMYILRAVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILKYE*
Ga0115031_103452533300009439MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKEKRTSREYTFILFLILTKKIK*
Ga0115031_104226933300009439MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYAFILFLILKRKERVKI*
Ga0114956_102722413300009446MarineMYIFRVVIFSLDKLNLTRILTVFKENLVKYKGKRTSREYTFILFLI
Ga0114956_103293933300009446MarineMYILRAVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFL
Ga0114956_103642613300009446MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILSTLFYKFIYIF*
Ga0209595_10020553300026840MarineMYILRIVIFSLDEPNLTRILTVFKENLVKYKGKITSREYTFILFLILNY
Ga0209595_10022343300026840MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTGREYAFILFLILKRKERVKI
Ga0209595_100264133300026840MarineMYILRVVIFFLDEPNLTRILTVFKENLVKYKEERTSREYTFILFLILSTVFQKFIYIYLCVQKRTYYEKATR
Ga0209595_10098953300026840MarineMYILRVVIFSLDELNLTRILTVFKENLVKYKGKRTSQEYTFILFLMLSTLFYKFIYIF
Ga0209595_10109563300026840MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKGTSREYTFILFLILSSKYQEFKNV
Ga0209595_10134973300026840MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTTREYTLILFLVISQ
Ga0209595_10205523300026840MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKAKRTSREYTFILFLILSIRN
Ga0209595_10205533300026840MarineMCILRVVIFSLDEPNLTRILTVFKENLVKHKGKRTSREYTFILFLILSIRN
Ga0209595_10295023300026840MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTSILFLILREKR
Ga0209595_10365323300026840MarineMYILRVVIFSLDESNLRRILTVFKENLVKYKGKRTSREYTFILFLILILSWVDV
Ga0209595_10549613300026840MarineMYILRVVIFSLDEPNLTRILPVFKKNLVKYKGKRTSREYTFILFLISKWKYKFKRKFKFK
Ga0209093_100039523300027009MarineMYILRIVIFSLDEPNLTRILTVFKKKLVKYKEKRTSREYTFILFLILNWNGFFYFGYG
Ga0209093_100307453300027009MarineMYILRIVIFSLDELNLTRILTVFKENLVKYKGKRTSQEYTFILFLMLSTLFYKFIYIF
Ga0209093_100362213300027009MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKITSREYTFILFLILILVIHYLSL
Ga0209093_100647023300027009MarineMYILRVVIFSLDEPNLMRILTVFKENLVKYKGKITSREYTFILFLILSIRN
Ga0209093_101117033300027009MarineMYILRAVIFFLDEPNLTRILTVFKENLVKYKGKITSREYTFNFFH
Ga0209093_101126123300027009MarineMYILRVVIFSLDESNLRRILTVFKENLVKYKGKRTSREYTFILFPILILSWVDV
Ga0209093_101135143300027009MarineMYILRVVIFSLDEPNLTRILIVFKENLVKYKGKRTSRECTFIKALFLSSKSI
Ga0209093_101310613300027009MarineMYILRAVIFSLNEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILKYE
Ga0209093_101952923300027009MarineMYILRVVIFSLDEPNLTQILTVFKENLVKYKGKITSREYTFILF
Ga0209093_101964413300027009MarineMYILRVVIFSLDEPILTRILTVFKENLVKYKGKRTSRECTFILFLI
Ga0209093_105679213300027009MarineMYILRVVIFSLGDPNLTRILTAFKENLVKYKGKRTSREYTFILFLILSIKVVNT
Ga0209295_1000520103300027028MarineMYILRVVIFSLDEPNLTRILAVFKENLVKYKGKKTSREYTFILFLILSIRN
Ga0209295_100196273300027028MarineMYILRVVIFSLDELNLTRILTVFKENLVKYKEKRTSREYTFILFLILSIFYLSV
Ga0209295_100258723300027028MarineMYILRVVIFSLDEPILTRILIVFKENLVKYKGKRTSRECTFILFLILSIRN
Ga0209295_100258733300027028MarineMYILRAVIFSLDEPILTRILIVFKENLVKYKGKRTSRECTFILFLILCP
Ga0209295_101259533300027028MarineMYILRVVIFSLDEPNLTRILIVFKENLVKYKEKRTSQDVVLIVFSSLSEK
Ga0209303_1000107503300027262MarineMYILRVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILLLILSFEGVAN
Ga0209303_100011643300027262MarineMYILRIVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILNY
Ga0209303_1000587123300027262MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILISLRKKPYL
Ga0209303_1000831183300027262MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTTREYTLILFLVLSQ
Ga0209303_100119433300027262MarineMYILRIVVFSLDEPNLMRILTVFKENLVKYKEKRTSQDVVFIVFSFLSEK
Ga0209303_100204733300027262MarineMYILRVVIFYLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILSI
Ga0209303_100402963300027262MarineMYILRVVIFSLGEPNLTRILTAFKENLVKYKGKRTSREYTFILFLILSIKVVNTFFEM
Ga0209303_105182813300027262MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKKTSQDVMFIVFHP
Ga0209186_100745233300027325MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILK
Ga0209186_101005033300027325MarineMYILRVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILFLILSIRN
Ga0209187_100192113300027509MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTTREYTLILFLVLSTLFHKFIYFFEYFF
Ga0209187_100322083300027509MarineMYILRVVIFSLDESNLTRILTVFKENLVKYKGKRTSREFTFILFLILR
Ga0209187_100422963300027509MarineMYILHVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILLLILSFEGVAN
Ga0209187_100565093300027509MarineMYILRVVIFYLDEPNLTRILTVFKENLVKYKGKKTSREYTFILFLILSI
Ga0209187_100899053300027509MarineMYILRVVIFSLDEPNLTRILTVFKENLVKCKGKRTSRECTFILSLLSHFDND
Ga0209187_100902243300027509MarineMYILRVVIFSLDEPNLTQIITVFKENLVKYKGKRTSREYTFILFLILRDEKINNRHH
Ga0209187_100955413300027509MarineMYILRVVIFSLGDPNLTRILTAFKENLVKYKGKRTSREYTFILFLILSIKVVNTFFEM
Ga0209187_101223043300027509MarineMYILHVVIFSLDEPNLMRILTVFKENLVKYKGKRTSREYTFILFLILSIRN
Ga0209187_101245933300027509MarineMYILRVVIFSLDKLNLTRILTVFKENLVKYKGKRTSREYTFILFLILSTLFYKFIYIF
Ga0209187_101253833300027509MarineMYILRIVVFSLDEPNLTRILTVFKENLVKYKEKRTSQDVVFIVFSSLSEK
Ga0209187_101434413300027509MarineMYILRTVIFSLYESNLTRILTVFKENLVKYKEKRTSREYTFILFLILS
Ga0209187_107127913300027509MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKKTSQDVVFIIFHP
Ga0209187_114659213300027509MarineMYILRVVIFSLDEPNLTQILTVFKENLVKYKGKRTSQDVVFIVFSSLRDGKTINVASSHR
Ga0209831_1002485123300027554MarineMYILRIVIFSLDEPNLTRILTVFKEKLVKYKGKRTSREYTFILFLILNWNGFFYFGYK
Ga0209831_100308213300027554MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTGREYTFIFFLSLSTLFHKFIY
Ga0209831_100987233300027554MarineMYILRVVIFSLDETNLTRILTVFKENLVKYKGKRTSREYTFILFLY
Ga0209831_101325053300027554MarineMYILRVVIFSLDEPILTRILTVFKENLVKYKGKRTSRECTFILFLILCP
Ga0209831_102744113300027554MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKEKRTSREYTFILFLILTKKIK
Ga0209828_100968433300027623MarineMYILRAVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYTFILFLILKYE
Ga0209828_101123313300027623MarineMYILRIVIFSLDEPNLTRILTVFKESLVKYKGKRTSREYTFILFLILEVKYW
Ga0209828_102042123300027623MarineMYILRVVIFSLDEPNLTRILTVFKENLVKYKGKRTSREYAFILFLILKRKERVKI
Ga0209828_105211233300027623MarineMYILRVVIFSLDEPNLARILTVFKGNLVKYKGKRISRKYTFILFLILSTL
Ga0209828_106296433300027623MarineMYILRVVIFSLDEPNLTQILTVSKENLVKYKGKRTSREYTFILFLILSTLFHKFIYFF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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