Metagenome Family F096536

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096536
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	QAAFGSADESDLCQYDIDCDGQINPVDSGIVQSLFGTCEAPREVCP
Number of Associated Samples	11
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	9
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (71.154 % of family members)
Environment Ontology (ENVO)	Unclassified (92.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (75.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.92% β-sheet: 0.00% Coil/Unstructured: 81.08%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14312	FG-GAP_2	6.73
PF00400	WD40	2.88
PF13229	Beta_helix	2.88
PF01663	Phosphodiest	2.88
PF00425	Chorismate_bind	1.92
PF00144	Beta-lactamase	1.92
PF02321	OEP	1.92
PF07638	Sigma70_ECF	1.92
PF13772	AIG2_2	1.92
PF01081	Aldolase	0.96
PF13432	TPR_16	0.96
PF06965	Na_H_antiport_1	0.96
PF08281	Sigma70_r4_2	0.96
PF01546	Peptidase_M20	0.96
PF01609	DDE_Tnp_1	0.96
PF14255	Cys_rich_CPXG	0.96
PF08309	LVIVD	0.96
PF00058	Ldl_recept_b	0.96
PF14579	HHH_6	0.96
PF02826	2-Hacid_dh_C	0.96
PF04337	DUF480	0.96
PF00378	ECH_1	0.96
PF13517	FG-GAP_3	0.96
PF13361	UvrD_C	0.96
PF13546	DDE_5	0.96
PF03631	Virul_fac_BrkB	0.96
PF07589	PEP-CTERM	0.96
PF02797	Chal_sti_synt_C	0.96
PF01839	FG-GAP	0.96
PF07726	AAA_3	0.96
PF08240	ADH_N	0.96
PF13231	PMT_2	0.96
PF01797	Y1_Tnp	0.96
PF13419	HAD_2	0.96
PF08547	CIA30	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.92
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.92
COG0800	2-keto-3-deoxy-6-phosphogluconate aldolase	Carbohydrate transport and metabolism [G]	0.96
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.96
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.96
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.96
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.96
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.96
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.96
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.96
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.96
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.96
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	27.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	26.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	8.65 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	6.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.92 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.96 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.96 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.96 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	4.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.96 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.96 %
Phycisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae	0.96 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	4.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.92 %
unclassified Phycisphaeraceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae	0.96 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.96 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	4.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.92 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.96 %
Phycisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.96 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002334\|xDRAFT_10189821	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300002334\|xDRAFT_10199211	Not Available	590	Open in IMG/M
3300002334\|xDRAFT_10523556	Not Available	537	Open in IMG/M
3300002334\|xDRAFT_10527420	Not Available	514	Open in IMG/M
3300002334\|xDRAFT_10977139	Not Available	684	Open in IMG/M
3300009030\|Ga0114950_10088314	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2465	Open in IMG/M
3300009030\|Ga0114950_10127473	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2041	Open in IMG/M
3300009030\|Ga0114950_10189771	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1656	Open in IMG/M
3300009030\|Ga0114950_10224692	Not Available	1513	Open in IMG/M
3300009030\|Ga0114950_10224713	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1513	Open in IMG/M
3300009030\|Ga0114950_10301131	Not Available	1292	Open in IMG/M
3300009030\|Ga0114950_10314024	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1262	Open in IMG/M
3300009030\|Ga0114950_10314840	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1260	Open in IMG/M
3300009030\|Ga0114950_10388198	Not Available	1121	Open in IMG/M
3300009030\|Ga0114950_10388441	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1121	Open in IMG/M
3300009030\|Ga0114950_10389044	Not Available	1120	Open in IMG/M
3300009030\|Ga0114950_10405279	Not Available	1094	Open in IMG/M
3300009030\|Ga0114950_10564741	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	907	Open in IMG/M
3300009030\|Ga0114950_10602462	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	874	Open in IMG/M
3300009030\|Ga0114950_10646675	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	839	Open in IMG/M
3300009030\|Ga0114950_10701414	Not Available	801	Open in IMG/M
3300009030\|Ga0114950_10765984	Not Available	762	Open in IMG/M
3300009030\|Ga0114950_10807018	Not Available	739	Open in IMG/M
3300009030\|Ga0114950_10830497	Not Available	727	Open in IMG/M
3300009030\|Ga0114950_10871524	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009030\|Ga0114950_10886881	Not Available	700	Open in IMG/M
3300009030\|Ga0114950_10891477	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	698	Open in IMG/M
3300009030\|Ga0114950_10956342	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	671	Open in IMG/M
3300009030\|Ga0114950_11062156	Not Available	632	Open in IMG/M
3300009030\|Ga0114950_11111847	Not Available	616	Open in IMG/M
3300009030\|Ga0114950_11212489	Not Available	587	Open in IMG/M
3300009030\|Ga0114950_11225388	Not Available	583	Open in IMG/M
3300009030\|Ga0114950_11264452	Not Available	573	Open in IMG/M
3300009030\|Ga0114950_11291923	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009030\|Ga0114950_11410373	All Organisms → cellular organisms → Bacteria → PVC group	539	Open in IMG/M
3300009030\|Ga0114950_11433869	Not Available	534	Open in IMG/M
3300009030\|Ga0114950_11494209	Not Available	522	Open in IMG/M
3300009030\|Ga0114950_11549603	Not Available	512	Open in IMG/M
3300009030\|Ga0114950_11608473	Not Available	501	Open in IMG/M
3300009030\|Ga0114950_11618474	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009102\|Ga0114948_10076441	Not Available	2163	Open in IMG/M
3300009102\|Ga0114948_10441431	Not Available	985	Open in IMG/M
3300009102\|Ga0114948_10908717	Not Available	689	Open in IMG/M
3300009102\|Ga0114948_11306907	Not Available	574	Open in IMG/M
3300009102\|Ga0114948_11679037	Not Available	506	Open in IMG/M
3300009139\|Ga0114949_10021721	All Organisms → cellular organisms → Bacteria	4583	Open in IMG/M
3300009139\|Ga0114949_10105553	Not Available	2172	Open in IMG/M
3300009139\|Ga0114949_10138126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1905	Open in IMG/M
3300009139\|Ga0114949_10202574	Not Available	1572	Open in IMG/M
3300009139\|Ga0114949_10379097	Not Available	1130	Open in IMG/M
3300009139\|Ga0114949_10484506	Not Available	990	Open in IMG/M
3300009139\|Ga0114949_10515339	Not Available	957	Open in IMG/M
3300009139\|Ga0114949_10524624	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	948	Open in IMG/M
3300009139\|Ga0114949_10639027	Not Available	852	Open in IMG/M
3300009139\|Ga0114949_10733141	Not Available	790	Open in IMG/M
3300009139\|Ga0114949_10776680	Not Available	766	Open in IMG/M
3300009139\|Ga0114949_10818560	Not Available	744	Open in IMG/M
3300009139\|Ga0114949_10966819	Not Available	680	Open in IMG/M
3300009139\|Ga0114949_11181692	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009139\|Ga0114949_11265291	Not Available	589	Open in IMG/M
3300009139\|Ga0114949_11274822	Not Available	587	Open in IMG/M
3300009139\|Ga0114949_11308248	Not Available	579	Open in IMG/M
3300009139\|Ga0114949_11438741	All Organisms → cellular organisms → Eukaryota	550	Open in IMG/M
3300009139\|Ga0114949_11470549	Not Available	544	Open in IMG/M
3300010392\|Ga0118731_115277607	Not Available	558	Open in IMG/M
3300011112\|Ga0114947_10699746	Not Available	736	Open in IMG/M
3300011112\|Ga0114947_10736734	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300011112\|Ga0114947_11186038	Not Available	571	Open in IMG/M
3300020234\|Ga0212227_1113771	Not Available	3819	Open in IMG/M
3300020234\|Ga0212227_1149507	Not Available	1226	Open in IMG/M
3300020234\|Ga0212227_1223756	Not Available	2198	Open in IMG/M
3300020234\|Ga0212227_1226894	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2533	Open in IMG/M
3300020234\|Ga0212227_1276859	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2106	Open in IMG/M
3300020234\|Ga0212227_1316029	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	5938	Open in IMG/M
3300020234\|Ga0212227_1342792	Not Available	1187	Open in IMG/M
3300020234\|Ga0212227_1402445	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1720	Open in IMG/M
3300020235\|Ga0212228_1003505	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300020235\|Ga0212228_1096268	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1880	Open in IMG/M
3300020235\|Ga0212228_1112781	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1600	Open in IMG/M
3300020235\|Ga0212228_1136541	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1876	Open in IMG/M
3300020235\|Ga0212228_1137754	Not Available	2427	Open in IMG/M
3300020235\|Ga0212228_1193346	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1673	Open in IMG/M
3300020235\|Ga0212228_1198126	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1321	Open in IMG/M
3300020235\|Ga0212228_1208456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1104	Open in IMG/M
3300020235\|Ga0212228_1214428	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1112	Open in IMG/M
3300020235\|Ga0212228_1274104	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1194	Open in IMG/M
3300020235\|Ga0212228_1303814	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1488	Open in IMG/M
3300020235\|Ga0212228_1316300	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300020235\|Ga0212228_1328845	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300020235\|Ga0212228_1374479	Not Available	1318	Open in IMG/M
3300024060\|Ga0209987_10295532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	905	Open in IMG/M
3300024060\|Ga0209987_10526183	Not Available	629	Open in IMG/M
3300024431\|Ga0209988_10232475	Not Available	1074	Open in IMG/M
3300024431\|Ga0209988_10278843	Not Available	957	Open in IMG/M
3300024431\|Ga0209988_10287901	Not Available	938	Open in IMG/M
3300024431\|Ga0209988_10417165	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	736	Open in IMG/M
3300024431\|Ga0209988_10500191	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	651	Open in IMG/M
3300024431\|Ga0209988_10588232	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	583	Open in IMG/M
3300024431\|Ga0209988_10614413	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300024431\|Ga0209988_10630485	Not Available	555	Open in IMG/M
3300024431\|Ga0209988_10646602	Not Available	545	Open in IMG/M
3300024431\|Ga0209988_10661936	Not Available	536	Open in IMG/M
3300033407\|Ga0214472_10789968	Not Available	855	Open in IMG/M
3300033407\|Ga0214472_10819425	Not Available	836	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.08%
Terrestrial	Environmental → Terrestrial	1.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.08%
Soil	Environmental → Terrestrial → Soil	1.92%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	97.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	92.31%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	4.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.92%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.96%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	71.15%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	21.15%
Marine Biofilm	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Biofilm	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.92%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002334	North Pond borehole 395A, 173 mbsf, polyester segment	Environmental	Open in IMG/M
3300009030	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaG	Environmental	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009139	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300011112	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG	Environmental	Open in IMG/M
3300020234	Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074	Environmental	Open in IMG/M
3300020235	Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N075	Environmental	Open in IMG/M
3300024060	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG (SPAdes)	Environmental	Open in IMG/M
3300024431	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaG (SPAdes)	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
xDRAFT_101898211	3300002334	Marine Biofilm	PVDAGIVQTNFGNTTDQALCNYDLDCDGQINPVDSGIVQGLLGTCDRPRDVCR*
xDRAFT_101992111	3300002334	Marine Biofilm	HSFPTRRSSDLPVDSGLVQAAFGSSDEQDLCNYDIDCDGQINPVDSGIVQSLFGTCEAPRAACP*
xDRAFT_105235562	3300002334	Marine Biofilm	CDGDVDGDEQVNPVDSGLVQAAYGTADGSNLCQFDLDCNGVIDPIDTGIVQSLFGTCDPPRGGCP*
xDRAFT_105274202	3300002334	Marine Biofilm	GQVNPVDAALVQAAFGSLDDQDICNYDLDCDGHINPVDSGIVHSLLGTCEDPRDVCR*
xDRAFT_109771391	3300002334	Marine Biofilm	VCSSDLQVNPVDSGLVQAAFGSVDGQDLCNYDADCDGQINPVDSGIVQSLFGTCEAPRNTCP*
Ga0114950_100883142	3300009030	Deep Subsurface	AFGSLDDQDLCNYDVDCDGQINPVDSGIVQSLFGACEEPRDVCP*
Ga0114950_101274733	3300009030	Deep Subsurface	VQAAFGSADEQDVCNYDVDCDGQINPVDSGIVQSLFGTCDAPRETCP*
Ga0114950_101897711	3300009030	Deep Subsurface	QAAFGSGDQQDLCNYDVDCDGQINPVDSGIVQSLFGTCEAVRSVCP*
Ga0114950_102246923	3300009030	Deep Subsurface	AFGSSDDQDLCNYDLDCDGQIDPTDSGIVQSLFGTCDAPRGVCP*
Ga0114950_102247132	3300009030	Deep Subsurface	CNYDVDCDGHINPVDSGIVQSLFGTCNAPRAACP*
Ga0114950_103011314	3300009030	Deep Subsurface	STDESDLCNFDIDCDGQINPVDAGIVQSLFGTCEEPREACP*
Ga0114950_103140242	3300009030	Deep Subsurface	VQAAFGSGDEQDLCNYDVDCDGQINPVDSGIVQSLFGTCDAPRDSCP*
Ga0114950_103148402	3300009030	Deep Subsurface	VSGDGQVNPVDLGFVQANFGSIDPQALCNYDLDCDRQINPVDAGIVQSLFGTCDAPRDVCP*
Ga0114950_103881981	3300009030	Deep Subsurface	VDTPALSIADYTGTDAGRVARFKPVDYDGQINPVDSGIVQSLFGTCLEPREACP*
Ga0114950_103884411	3300009030	Deep Subsurface	LVQAAFGSADGQDLCNYDVDCDGQINPVDAGIVQSLFGTCDAPRNVCP*
Ga0114950_103890441	3300009030	Deep Subsurface	GDGQVNPVDSGLVQSAFGSADGQDLCNYDIDCDGQIGPADSGIVQSLFGTCEAPRDVCP*
Ga0114950_104052792	3300009030	Deep Subsurface	VQAAFGSTDEANLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRGECP*
Ga0114950_105647411	3300009030	Deep Subsurface	SDEDNLCQYDVDCDGQINPVDSGIVQSLFGTCEQPREVCP*
Ga0114950_106024621	3300009030	Deep Subsurface	LVQAAFGSADESDLCQYDIDCDGQINPVDAGIVQSLFGTCEAPRDVCP*
Ga0114950_106466751	3300009030	Deep Subsurface	GQVNPVDSGLVQSAFGSADGQDLCNYDVDCDGQINPVDAGIVQSLFGTCEAPRDVCP*
Ga0114950_107014141	3300009030	Deep Subsurface	NPVDSGLVQAAFGSADGQDLCNYDLDCDGQINPVDGGIVQSLFGTCEAPREVCP*
Ga0114950_107659842	3300009030	Deep Subsurface	QVNPVASGLVQAAFGSTDNQDLCNYDTDCDGQINPVDSGIVQSLFGTCEAPRNACP*
Ga0114950_108070182	3300009030	Deep Subsurface	GDGQVNPVDSGLVQAAFGSTDETDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRNSCP*
Ga0114950_108304972	3300009030	Deep Subsurface	FGSADEQDLCNYDVDCDNQINPVDAGIVQSLFGTCEQPRDVCP*
Ga0114950_108715242	3300009030	Deep Subsurface	FGSLDDQDLCNYDVDCDGQINPVDSGIVQSLFGTCEEPRSVCP*
Ga0114950_108868813	3300009030	Deep Subsurface	ANFGNTTDQALCNFDLDCDGQINPVDSGIVQALFGTCEEPRGVCP*
Ga0114950_108914772	3300009030	Deep Subsurface	CQYDVDCDGQINPVDSGIVQSLFGTCQEPRAACP*
Ga0114950_109563421	3300009030	Deep Subsurface	TTDQALCNYDVDCDGQINPVDSGIVQSLFGTCETPREVCP*
Ga0114950_110621561	3300009030	Deep Subsurface	DLCNYDMDCDGQINPVDSGIVQSLFGACDPPRETCP*
Ga0114950_111118471	3300009030	Deep Subsurface	DLCQYDLDCDGQINPVDSGIVQSLFGTCEAPRDVCP*
Ga0114950_112124892	3300009030	Deep Subsurface	CQYDIDCDGQINPVDSGIVQSLFGTCEAPRDVCP*
Ga0114950_112253882	3300009030	Deep Subsurface	DSGLVLAAFGSADEGDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRDACP*
Ga0114950_112644522	3300009030	Deep Subsurface	GQVNPVDSGLVQAAFGSTDDGDLCQYDIDCDGQINPVDSGIVQSLFGTCEAPREVCP*
Ga0114950_112919232	3300009030	Deep Subsurface	VQAAFGSADESDLCQYDVDCDGQLNPVDSGIVQSLFGTCEAPRDGGP*
Ga0114950_114103731	3300009030	Deep Subsurface	LCNYDVDCDGQINPVDSGIVQSLFGTCDAPRGVCP*
Ga0114950_114338691	3300009030	Deep Subsurface	ETDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRAACP*
Ga0114950_114942092	3300009030	Deep Subsurface	EQDLCNYDVDCDGQINPVDSGIVQSLFGTCEEPRDACQ*
Ga0114950_115496031	3300009030	Deep Subsurface	SGLVQSYFGSTDEQILCQYDIDCDGQINPVDAGIVQSLFGTCEAPRGVCP*
Ga0114950_116084731	3300009030	Deep Subsurface	AFGSDDDPALCNYDLDCDGQINPVDSGIVQSLFGTCDEPRDTCP*
Ga0114950_116184741	3300009030	Deep Subsurface	EGDLCQYDLDCDGQINPVDSGIVQSLFGTCDPPREVCP*
Ga0114948_100764413	3300009102	Deep Subsurface	FGSIDEGDLCQYDVDRDGQINPVDSGIVQSLFGTCEAPRGVCP*
Ga0114948_104414312	3300009102	Deep Subsurface	QAAFGSGDEQALCNYDIDCDGQINPVDSGIVQSLFGTCEAPRDTCQ*
Ga0114948_109087172	3300009102	Deep Subsurface	DESDLCQYDIDCDGQINPVDSGIVQSLFGTCNAPRSACP*
Ga0114948_113069071	3300009102	Deep Subsurface	GQVNPVDSGTVQANFGNTTDQALCNFDLDCDGQINPVDAGIVQSLFGTCEEPRSECP*
Ga0114948_116790371	3300009102	Deep Subsurface	DALCQYDIDCDGQINPVDSGIVQSLFGMCEAPRGVCP*
Ga0114949_100217213	3300009139	Deep Subsurface	DAGLVQAAFGSADESDLCQYDIDCDGQINPVDSGIVQSLFGTCEAPREECP*
Ga0114949_101055531	3300009139	Deep Subsurface	GQVNPVDSGLVQAAFGSTDEHDVCQYDMDCDGQINPVDSGIVQSLFGTCEEPREACP*
Ga0114949_101381263	3300009139	Deep Subsurface	VDLGLVQAAFGSTARLDLCNYDLDCDGHINPVDAGIVQSLFGTCNAPRSACP*
Ga0114949_102025742	3300009139	Deep Subsurface	DSGLVQAAFGSVDGQDICNYDMDCDGQINPVDAGIVQAMFGTCDPPPYVCP*
Ga0114949_103790972	3300009139	Deep Subsurface	GQVNPVDSGLVQAAFCSDLGCTPDALCQYDMDCDMQINPVDAGLVQSLFGTCEAPREVCP
Ga0114949_104845061	3300009139	Deep Subsurface	QAAFGSADESDLCQYDIDCDGQINPVDSGIVQSLFGTCEAPREVCP*
Ga0114949_105153392	3300009139	Deep Subsurface	CNYDIDCDGQINPVDSGIVQSLFGTCEAPRDTCQ*
Ga0114949_105246241	3300009139	Deep Subsurface	QVNPVDSGLVQAAFGSVEDQDLCNYDVDCDGQINPVDSGIVQSLFGTCDAPRETCP*
Ga0114949_106390272	3300009139	Deep Subsurface	VQAAFGSADESDLCQYDVDCDGQINPVDAGIVQSLFGTCEAPRAACP*
Ga0114949_107331411	3300009139	Deep Subsurface	AFGSADESDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRDVCP*
Ga0114949_107766802	3300009139	Deep Subsurface	GQVNPVDSGLVQAAFGSTDESDLCNYDVDCDGQINPVDAGIVQSLFGT*
Ga0114949_108185602	3300009139	Deep Subsurface	DGQVNPVDSGLVQASFGSLDEQDLCNYDVDCDGQINPVDSGIVQSLFGTCDAPRGACP*
Ga0114949_109668192	3300009139	Deep Subsurface	GSTDNQDLCNYDTDCDGQINPVDSGIVQSLFGTCEAPRNACP*
Ga0114949_111816921	3300009139	Deep Subsurface	QAAFGSTDETDLCQYDVDCDGQINPVDSGIVQSLFGTCDAPRAACP*
Ga0114949_112652911	3300009139	Deep Subsurface	GSADEQDLCNYDIDCDGQINPVDSGIVQSLFGTCEEPRAVCP*
Ga0114949_112748221	3300009139	Deep Subsurface	VDSGLVQAAFGSADEQDLCNYDVDCDGQINPVDSGIVQSLFGTCEAPRDECP*
Ga0114949_113082482	3300009139	Deep Subsurface	IVQANFGNTDEQALCNYDVDCDGQINPVDSGIVQSLFGTCEEPRDVCLP*
Ga0114949_114387412	3300009139	Deep Subsurface	DSGIVQANFGNADEQALCNYDVDCDGQINPVDSGIVQSLFGTCEAPRGACP*
Ga0114949_114705492	3300009139	Deep Subsurface	VQAAFCAGEDCVGDALCQYDMDCDGQINPVDSGIVQSLFGTCDAPRGVCP*
Ga0118731_1152776071	3300010392	Marine	SGLVQSAFGSTDEQDLCNYDLDCDAQINPVDSGIVQSLFGTCEEPREACP*
Ga0114947_106997462	3300011112	Deep Subsurface	ASLKAAEDSALVQAAFCSIDDQDLYNYDIDCDGQINPVDSGIVQSLFGTCNAPREVCP*
Ga0114947_107367342	3300011112	Deep Subsurface	DGDGQVNPVDSGLVQAAFGSADEQNLCNYDLDCDGQINPVDSGIVQSLFGTCDPPRDGCP
Ga0114947_111860381	3300011112	Deep Subsurface	DLCNYDVDCDNQINPVDAVVVQSLFGTCEQPRDVCP*
Ga0212227_11137711	3300020234	Sediment	AAFGSIDEQDICNYDVDCDGQINPVDSGIVQSLFGTCDPPRDECQ
Ga0212227_11495072	3300020234	Sediment	DSGLVQASFGSTDQSDLCQYDVDCDGQINPVDSGIVQSLFGTCEEPRSACP
Ga0212227_12237561	3300020234	Sediment	GQVNPVDSGLVQAAFGSTDEHDVCQYDMDCDGQINPVDSGIVQSLFGTCEEPREACP
Ga0212227_12268943	3300020234	Sediment	VQAAFGSADESDLCQYDVDCDGQINPVDSGIVQSLFGTCDPPRDGCP
Ga0212227_12768591	3300020234	Sediment	AAFGSTDEADLCQYDVDCDGQINPVDAGIVQSLFGTCEEPREVWP
Ga0212227_13160291	3300020234	Sediment	DLCQYDIDCDGQINPVDSGIVQSLFGICNAPRATCP
Ga0212227_13427921	3300020234	Sediment	EQDLCNYDVDCDGQINPVDSGIVQSLFGTCEEPRDVCP
Ga0212227_14024451	3300020234	Sediment	GLVQASFGSTDETDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPREVCP
Ga0212228_10035053	3300020235	Sediment	QAAFSSTDEGDLCRFDIDCDGQINPVDSGIVQSLFGTCLEPREACP
Ga0212228_10962683	3300020235	Sediment	FGSADGQDLCNYDIDCDGQIGPADSGIVQSLFGTCEAPRDVCP
Ga0212228_11127811	3300020235	Sediment	AAFGSNDEGDLCQYDVDCDGQINPVDSGIVQSLFGTCEEPREACP
Ga0212228_11365411	3300020235	Sediment	SAAPGDSGIVQAHFGSKQDDALCNYDVDCDGQVNPVDAGIVQSLFGTCDAPRNVCP
Ga0212228_11377541	3300020235	Sediment	DGQVNPVDAGLVQAAFGSADESDLCQYDIDCDGQINPVDSGIVQSLFGTCNEPRDTCP
Ga0212228_11933461	3300020235	Sediment	GDGQVNPVDSGLVQAAFGSTDETDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRNSCP
Ga0212228_11981263	3300020235	Sediment	GDGQVNPVDSGLVQSAFGSADGQDLCNYDIDCDGQIGPADSGIVQSLFGTCEAPRDVCP
Ga0212228_12084563	3300020235	Sediment	LVQAAFGSIDDQDLCNYDIDCDNQINPVDSGIVQSLFGTCEEPRDVCP
Ga0212228_12144281	3300020235	Sediment	TDQALCNFDIDCDGQINPVDAGIVQSLFGTCEAPRGECP
Ga0212228_12741041	3300020235	Sediment	DGDGQVNPVDSGLIQAAFGSTNEGDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRHVCP
Ga0212228_13038141	3300020235	Sediment	QQDLCNYDIDCDGQINPVDAGIVQSLFGTCEAVRAVCP
Ga0212228_13163003	3300020235	Sediment	SSDDGDLCQYDVDCDGQINPVDAGIVQSLFGTCNAPRGACP
Ga0212228_13288451	3300020235	Sediment	NPVDSGLVQAAFGSGDEQDLCNYDIDCDGQINPVDSGIVQSLFGTCETPREGCP
Ga0212228_13744791	3300020235	Sediment	GSSDDQDLCNYDLDCDGQINPVDSGIVQSLFGTCDSPREVCP
Ga0209987_102955321	3300024060	Deep Subsurface	AFGSADESDLCQYDVDCDGQINPVDSGIVQSLFGTCEAPRDVCP
Ga0209987_105261831	3300024060	Deep Subsurface	DSGLVQAAFGSFDEQDLCNYDMDCDGQINPVDSGIVQSLFGACEEPRTVCP
Ga0209988_102324751	3300024431	Deep Subsurface	NPVDSGLVQAAFGSNDEGDLCQYDVDCDGQINPVDSGIVQSLFGTCEEPREACP
Ga0209988_102788432	3300024431	Deep Subsurface	VQAAFGSTDDQDLCNYDIDCDGQINPVDSGIVQSLFGTCEEPRSVCP
Ga0209988_102879012	3300024431	Deep Subsurface	NTDEQALCNYDVDCDGQINPVDAGIVQSLFGTCEAPRGACP
Ga0209988_104171651	3300024431	Deep Subsurface	GQVNPVDSGLVQSAFGSADGQDLCNYDVDCDGQINPVDAGIVQSLFGTCEAPRDVCP
Ga0209988_105001911	3300024431	Deep Subsurface	VDEQDLCNYDVDCDGQINPVDSGIVQSLFGACDAPRETCP
Ga0209988_105882322	3300024431	Deep Subsurface	VNPVDSGLVQAAFGSADESDLCQYDVDCDGQINPVDSGIVQSLFGTCEEPRSVCP
Ga0209988_106144131	3300024431	Deep Subsurface	DLCNYDVDCDGQINPVDSGIVQSLFGACEAPREVCP
Ga0209988_106304851	3300024431	Deep Subsurface	QVNPVDSGLVQAAFGSTDEADLCQYDIDCDGQINPVDSGIVQSLFGTCEDPRDSCP
Ga0209988_106466021	3300024431	Deep Subsurface	VDSGLVQAAFGSTDEADLCQYDVDCDGQINPVDSGIVQSLFGACEEPRTVCP
Ga0209988_106619362	3300024431	Deep Subsurface	FGSVDEQDVCNYDVDCDGRINPVDSGIVQSLFGTCEAPRDVCQ
Ga0214472_107899682	3300033407	Soil	GQVNPVDSGIVQSAFGSIDEADLCQYDVDCNGQINPTDSAIIESLFGTCEAPRDACE
Ga0214472_108194252	3300033407	Soil	VDSGLIQAAFGSTDEGDLCRYDLDCDGQINPVDAAIVQSLFATCNVPRGVCP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences