Metagenome Family F096816

Basic Information
Family ID	F096816
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	101 residues
Representative Sequence	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.80 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	93.27 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (74.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.615 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.53% β-sheet: 36.08% Coil/Unstructured: 46.39%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14279	HNH_5	2.88
PF00839	Cys_rich_FGFR	0.96
PF13191	AAA_16	0.96
PF02776	TPP_enzyme_N	0.96
PF04226	Transgly_assoc	0.96
PF13396	PLDc_N	0.96
PF05559	DUF763	0.96
PF05175	MTS	0.96
PF09837	DUF2064	0.96
PF03734	YkuD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	0.96
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
All Organisms	root	All Organisms	25.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
cellular organisms	root	All Organisms → cellular organisms	25.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.35 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.35 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.35 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.73 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	6.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	6.73 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	6.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.04 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	6.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_6304493	Not Available	817	Open in IMG/M
3300004633\|Ga0066395_10309674	Not Available	866	Open in IMG/M
3300004633\|Ga0066395_10831040	Not Available	556	Open in IMG/M
3300004643\|Ga0062591_102060602	Not Available	590	Open in IMG/M
3300005331\|Ga0070670_100988572	Not Available	765	Open in IMG/M
3300005332\|Ga0066388_100339265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2149	Open in IMG/M
3300005332\|Ga0066388_101783328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1093	Open in IMG/M
3300005332\|Ga0066388_103913713	Not Available	760	Open in IMG/M
3300005332\|Ga0066388_106583511	Not Available	585	Open in IMG/M
3300005332\|Ga0066388_107066691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	565	Open in IMG/M
3300005340\|Ga0070689_100459750	Not Available	1084	Open in IMG/M
3300005365\|Ga0070688_101661439	Not Available	522	Open in IMG/M
3300005457\|Ga0070662_101046552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	699	Open in IMG/M
3300005544\|Ga0070686_101329547	Not Available	601	Open in IMG/M
3300005549\|Ga0070704_100566644	Not Available	994	Open in IMG/M
3300005577\|Ga0068857_100820690	Not Available	889	Open in IMG/M
3300005578\|Ga0068854_102180425	Not Available	512	Open in IMG/M
3300005615\|Ga0070702_100235375	Not Available	1233	Open in IMG/M
3300005713\|Ga0066905_100066370	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300005713\|Ga0066905_100958903	Not Available	752	Open in IMG/M
3300005764\|Ga0066903_100143662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3403	Open in IMG/M
3300005764\|Ga0066903_100703143	Not Available	1782	Open in IMG/M
3300005764\|Ga0066903_102119499	Not Available	1083	Open in IMG/M
3300005764\|Ga0066903_102121043	Not Available	1082	Open in IMG/M
3300005764\|Ga0066903_105431780	Not Available	672	Open in IMG/M
3300005764\|Ga0066903_107771853	Not Available	551	Open in IMG/M
3300006028\|Ga0070717_11099194	Not Available	724	Open in IMG/M
3300006049\|Ga0075417_10481755	Not Available	622	Open in IMG/M
3300006845\|Ga0075421_100742065	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300006847\|Ga0075431_101252094	Not Available	704	Open in IMG/M
3300006854\|Ga0075425_100565271	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300006871\|Ga0075434_101909031	Not Available	600	Open in IMG/M
3300009093\|Ga0105240_11531717	Not Available	699	Open in IMG/M
3300009148\|Ga0105243_11733987	Not Available	654	Open in IMG/M
3300010375\|Ga0105239_10663192	Not Available	1192	Open in IMG/M
3300010376\|Ga0126381_103631636	Not Available	604	Open in IMG/M
3300010396\|Ga0134126_10661212	Not Available	1190	Open in IMG/M
3300010400\|Ga0134122_10492404	Not Available	1107	Open in IMG/M
3300010403\|Ga0134123_10547638	Not Available	1100	Open in IMG/M
3300010868\|Ga0124844_1084860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1189	Open in IMG/M
3300010868\|Ga0124844_1085025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1188	Open in IMG/M
3300012897\|Ga0157285_10071110	Not Available	898	Open in IMG/M
3300012906\|Ga0157295_10367654	Not Available	526	Open in IMG/M
3300012912\|Ga0157306_10233658	Not Available	638	Open in IMG/M
3300014326\|Ga0157380_12217309	Not Available	613	Open in IMG/M
3300015374\|Ga0132255_101693890	Not Available	959	Open in IMG/M
3300016319\|Ga0182033_10997006	Not Available	745	Open in IMG/M
3300016319\|Ga0182033_11965331	Not Available	532	Open in IMG/M
3300016341\|Ga0182035_10633345	Not Available	927	Open in IMG/M
3300016357\|Ga0182032_10521528	Not Available	980	Open in IMG/M
3300016371\|Ga0182034_10201294	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300016387\|Ga0182040_10625778	Not Available	874	Open in IMG/M
3300016422\|Ga0182039_10540945	Not Available	1011	Open in IMG/M
3300016422\|Ga0182039_11999732	Not Available	533	Open in IMG/M
3300016445\|Ga0182038_10877506	Not Available	790	Open in IMG/M
3300019356\|Ga0173481_10145960	Not Available	971	Open in IMG/M
3300019361\|Ga0173482_10210751	Not Available	802	Open in IMG/M
3300019362\|Ga0173479_10076459	Not Available	1177	Open in IMG/M
3300021560\|Ga0126371_10238788	Not Available	1928	Open in IMG/M
3300021560\|Ga0126371_10857296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1053	Open in IMG/M
3300021560\|Ga0126371_11025396	Not Available	966	Open in IMG/M
3300023077\|Ga0247802_1078287	Not Available	555	Open in IMG/M
3300025905\|Ga0207685_10270006	Not Available	830	Open in IMG/M
3300025915\|Ga0207693_10044810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3476	Open in IMG/M
3300025916\|Ga0207663_11037458	Not Available	658	Open in IMG/M
3300025919\|Ga0207657_10033469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4633	Open in IMG/M
3300025927\|Ga0207687_10466459	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025928\|Ga0207700_10721717	Not Available	890	Open in IMG/M
3300025929\|Ga0207664_11766295	Not Available	541	Open in IMG/M
3300025933\|Ga0207706_10496401	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300025939\|Ga0207665_10641612	Not Available	832	Open in IMG/M
3300026023\|Ga0207677_11889062	Not Available	555	Open in IMG/M
3300026078\|Ga0207702_10868924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	893	Open in IMG/M
3300027874\|Ga0209465_10479239	Not Available	622	Open in IMG/M
3300027909\|Ga0209382_11406532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	700	Open in IMG/M
3300028608\|Ga0247819_10393620	Not Available	798	Open in IMG/M
3300031545\|Ga0318541_10795289	Not Available	528	Open in IMG/M
3300031716\|Ga0310813_10678860	Not Available	918	Open in IMG/M
3300031744\|Ga0306918_10237525	Not Available	1387	Open in IMG/M
3300031744\|Ga0306918_10313112	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300031744\|Ga0306918_10591538	Not Available	870	Open in IMG/M
3300031833\|Ga0310917_10165338	Not Available	1467	Open in IMG/M
3300031879\|Ga0306919_10612403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300031890\|Ga0306925_10273094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1821	Open in IMG/M
3300031890\|Ga0306925_11606912	Not Available	632	Open in IMG/M
3300031910\|Ga0306923_10079020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3685	Open in IMG/M
3300031910\|Ga0306923_11571886	Not Available	685	Open in IMG/M
3300031910\|Ga0306923_12461570	Not Available	514	Open in IMG/M
3300031954\|Ga0306926_10526847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1450	Open in IMG/M
3300032001\|Ga0306922_10340691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1609	Open in IMG/M
3300032001\|Ga0306922_10549569	Not Available	1228	Open in IMG/M
3300032001\|Ga0306922_12376413	Not Available	506	Open in IMG/M
3300032035\|Ga0310911_10307495	Not Available	913	Open in IMG/M
3300032066\|Ga0318514_10801867	Not Available	501	Open in IMG/M
3300032076\|Ga0306924_10766038	Not Available	1079	Open in IMG/M
3300032076\|Ga0306924_12065193	Not Available	585	Open in IMG/M
3300032076\|Ga0306924_12552622	Not Available	511	Open in IMG/M
3300032261\|Ga0306920_100615496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1606	Open in IMG/M
3300032261\|Ga0306920_101024937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1201	Open in IMG/M
3300032261\|Ga0306920_102664014	Not Available	684	Open in IMG/M
3300033289\|Ga0310914_10600972	Not Available	992	Open in IMG/M
3300033290\|Ga0318519_10125167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1412	Open in IMG/M
3300033412\|Ga0310810_11241767	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.81%
Host-Associated	Host-Associated	20.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.81%
Plants	Host-Associated → Plants	20.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.96%
Loam	Environmental → Terrestrial → Soil → Loam	28.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0916.00001740	2162886013	Switchgrass Rhizosphere	NLNSCARSCFALGQPSLLKAFLMPKNMDPLRQDITAILEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFRY
Ga0066395_103096742	3300004633	Tropical Forest Soil	MDLDPLRQDITAILEECYSRGMRLPYLFVAVSLDSKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS*
Ga0066395_108310401	3300004633	Tropical Forest Soil	MSAFGTHMLYPVSKSGFGGNTSAMDPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS*
Ga0062591_1020606021	3300004643	Soil	MLKTRMDLAHLRQDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVAAMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0070670_1009885721	3300005331	Switchgrass Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0066388_1003392653	3300005332	Tropical Forest Soil	MLKNTSAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0066388_1017833282	3300005332	Tropical Forest Soil	VLEECYSRGMQLPYLFVAVSLDGKVMGVRFTEAEEGDGLDAQPIAGNPNALATMPMPLNIMIVDATGQATCALISGPGQVKFRYS*
Ga0066388_1039137131	3300005332	Tropical Forest Soil	MTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0066388_1065835111	3300005332	Tropical Forest Soil	MSAMDPLRQDVTAVLEECYSQGMQLPYLFVAVSLDGKVMGVRFTEAEDGDGLDALPIAGNPNALATMPMPLNVMIVDATGQATCALISGPGQVSF
Ga0066388_1070666911	3300005332	Tropical Forest Soil	MDLDPLRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP*
Ga0070689_1004597501	3300005340	Switchgrass Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0070688_1016614391	3300005365	Switchgrass Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0070662_1010465521	3300005457	Corn Rhizosphere	MLKNTSAIDLGPIRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0070686_1013295471	3300005544	Switchgrass Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVRIVDATGQATCALISG
Ga0070704_1005666441	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLMGVRFTEAEEGNGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0068857_1008206902	3300005577	Corn Rhizosphere	MDLAHLRQDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIIDATGQATCALISGPGQVTFRYS*
Ga0068854_1021804252	3300005578	Corn Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0070702_1002353751	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRCS*
Ga0066905_1000663708	3300005713	Tropical Forest Soil	MDLDPLRQDITVILEECYSRGMQFPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0066905_1009589032	3300005713	Tropical Forest Soil	MDLDPLRQDITAVLEECCSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP*
Ga0066903_1001436627	3300005764	Tropical Forest Soil	MDPLRQDVTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEGEDGDGLDAQPIAGNPNALATMPMPLNVMIVDATGQATCALILGPGQVTFRYS*
Ga0066903_1007031434	3300005764	Tropical Forest Soil	SGSKSDFHAEKTSAMDLDPLRQDITAVLEECYSLGMQLPFLFVAVSLDGKLIGVRFTEAEDNDGLDAVPIAGNPNALATMPMPINVMIVDAVGQAACVLISCPGQVAFRYP*
Ga0066903_1021194992	3300005764	Tropical Forest Soil	MSAMDPLRQDVTAVLEECYSRGMQLPYLFVAVSLDGKVMGVRFTEAEDGDGLDAQPIAGNPNALATMPMPLNVMIVDAMGQATCALISGPGQVSFRYS*
Ga0066903_1021210431	3300005764	Tropical Forest Soil	MDLDPLRQDITAFLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP*
Ga0066903_1054317802	3300005764	Tropical Forest Soil	MDLDPLRQDITVILEECYSRGMQFPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS*
Ga0066903_1077718533	3300005764	Tropical Forest Soil	MDLDPIRQDITAVLEECYSRGMQVPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPG
Ga0070717_110991942	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAHPIAGNPNALATMPLPINVRIVDATGQATCALISGPGQVTFRYS*
Ga0075417_104817551	3300006049	Populus Rhizosphere	SAGYGPSSTRPNCHSRECYSRGMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPRQVRFRYS*
Ga0075421_1002972761	3300006845	Populus Rhizosphere	SSTRPNCHSRECYSRGMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS*
Ga0075421_1007420653	3300006845	Populus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGHVTFRYS*
Ga0075431_1012520942	3300006847	Populus Rhizosphere	MDLAHLRQDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGHVTFRYS*
Ga0075425_1005652711	3300006854	Populus Rhizosphere	MDPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS*
Ga0075434_1019090311	3300006871	Populus Rhizosphere	MLENTSAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0105240_115317171	3300009093	Corn Rhizosphere	LFLFALLYPASKSGFHAENTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0105243_117339872	3300009148	Miscanthus Rhizosphere	MFYPASKSGFDIENTSTMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFSEAEEGDRLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0105239_106631923	3300010375	Corn Rhizosphere	LFLFALLYPASKSGFHAENTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0126381_1036316361	3300010376	Tropical Forest Soil	AVLEECCSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP*
Ga0134126_106612121	3300010396	Terrestrial Soil	KAVLMLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRCS*
Ga0134122_104924043	3300010400	Terrestrial Soil	LFLFALLYPASKSGFHAENTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTAAEEDDGLDAQPIAGNPNAVGTMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0134123_105476381	3300010403	Terrestrial Soil	LFLFALLYPASKSGFHAENTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRCS*
Ga0124844_10848601	3300010868	Tropical Forest Soil	GYGPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS*
Ga0124844_10850251	3300010868	Tropical Forest Soil	HVGYGPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS*
Ga0157285_100711101	3300012897	Soil	LKSGFDAENTSAIDLAHLRQDITAVLEECYARGTRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0157295_103676541	3300012906	Soil	LAHLREDITAVLEKCYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0157306_102336581	3300012912	Soil	MLYPASKSGFDAENKSAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0157380_122173091	3300014326	Switchgrass Rhizosphere	LFLFALLYPASKSGFHAENTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQ
Ga0132255_1016938902	3300015374	Arabidopsis Rhizosphere	MFYPASKSGFDIENTSTMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEQGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS*
Ga0182033_109970061	3300016319	Soil	MDLDPLRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSDGLAAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVAFRYP
Ga0182033_119653311	3300016319	Soil	AVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0182035_106333452	3300016341	Soil	MDLGPLRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDTDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISGPGQATFHYP
Ga0182032_105215282	3300016357	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTEAEDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0182034_102012942	3300016371	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0182040_106257782	3300016387	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDDTGQAACALISGPGQATFRYP
Ga0182039_105409452	3300016422	Soil	MDLDPLRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSDGLAAVPIAGNPNALATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0182039_119997321	3300016422	Soil	MDPLRQDVTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDSDGLDAVPIAGNPNAVATMPMPINVMIVDATDQAACA
Ga0182038_108775062	3300016445	Soil	MDLDPLRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLAAVPIAGNPNALATMPMPINVMIVDATGQAACALIS
Ga0173481_101459602	3300019356	Soil	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0173482_102107511	3300019361	Soil	LLCCIPLLKAVFGAENTSAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0173479_100764591	3300019362	Soil	MDLAHLREDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0126371_102387882	3300021560	Tropical Forest Soil	MDLDPLRQDITVILEECYSRGMQFPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS
Ga0126371_108572963	3300021560	Tropical Forest Soil	YPVSKSGFGGNTSAMDPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS
Ga0126371_110253962	3300021560	Tropical Forest Soil	MDLDPLRQDITAVLEECCSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP
Ga0247802_10782871	3300023077	Soil	DLGPIRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTAAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207685_102700061	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207693_100448102	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LAHTCCTPFLKAVLAEKHVGYGPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS
Ga0207663_110374582	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SKSGFHAEKTLAMDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGAVMFRYS
Ga0207657_100334692	3300025919	Corn Rhizosphere	MDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207687_104664591	3300025927	Miscanthus Rhizosphere	MDLAHLRQDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGLGQVTFRYS
Ga0207700_107217172	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDLAHLRLDITAVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207664_117662951	3300025929	Agricultural Soil	LLAHTCCTPFLKAVLAEKHVGYGPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS
Ga0207706_104964012	3300025933	Corn Rhizosphere	MLENTSAMDLAHLRQDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207665_106416122	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIIDATGQATCALISGPGQVTFRYS
Ga0207677_118890622	3300026023	Miscanthus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFSEAEEGDRLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0207702_108689241	3300026078	Corn Rhizosphere	MDLAHLRQDITAVLEECYARGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS
Ga0209465_104792391	3300027874	Tropical Forest Soil	LCIMMSAFGTHMLYPVSKSGFGGNTSAMDPIRQDITAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS
Ga0209382_114065322	3300027909	Populus Rhizosphere	MLENTSAMDLAHLRQDITDVLEECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGHVTFRYS
Ga0247819_103936201	3300028608	Soil	LNSCARSCFALGQPSLLKAFLMPKNMDPLRQDITAILEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFPRY
Ga0318541_107952891	3300031545	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0310813_106788601	3300031716	Soil	RQDITAILEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFRYS
Ga0306918_102375251	3300031744	Soil	CSGSKSDFHAEKTSAMDLDPIRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0306918_103131121	3300031744	Soil	MDLDPIRQDITAVLEECYLRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0306918_105915382	3300031744	Soil	MDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0310917_101653382	3300031833	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISGPGQATFRYP
Ga0306919_106124032	3300031879	Soil	MDLDPIRQDITAVLEECYLRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISGPGQAT
Ga0306925_102730943	3300031890	Soil	MDLDPLRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0306925_116069122	3300031890	Soil	QSDFHAEKTSAMDLDPIRQDITAVLEECYLRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0306923_100790201	3300031910	Soil	MDPLRQDVTAVLEECYSRGMQLPYLFVAVSLDGKVMGVRFTEAEDGDGLDAQPIVGNPNALATMPMPLNVMIVDATGQATCAVISGPGQVTFRYA
Ga0306923_115718861	3300031910	Soil	LDPLRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0306923_124615702	3300031910	Soil	KTSAMDLDPLRQDITAVLEECCSRGMQLPFLFVAVSLDGKLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP
Ga0306926_105268471	3300031954	Soil	MDLDPIRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0306922_103406913	3300032001	Soil	MLKNMSAMDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0306922_105495691	3300032001	Soil	MDPLRQNVTAVLEECYSRGMQLPYLFVAVSLDGKVMGVRFTEAEDGDGLDAQPIVGNPNALATMPMPLNVMIVDATGQATCAVISGPGQVTFRYA
Ga0306922_123764131	3300032001	Soil	QDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0310911_103074951	3300032035	Soil	MLKNMSAMDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQTIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0318514_108018671	3300032066	Soil	AMDLDPIRQDITAVLEECYLRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP
Ga0306924_107660381	3300032076	Soil	MDLDPLRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVAFRYP
Ga0306924_120651931	3300032076	Soil	YVCNPILKAVLMLKNRSAMDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0306924_125526221	3300032076	Soil	PCADAGAEEALVSPCERAMDLDPLRQDITAVLEECYSRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISGPGQATFRYP
Ga0306920_1006154963	3300032261	Soil	MDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQTIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0306920_1010249372	3300032261	Soil	MDLDPIRQDITAVLEECYLRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0306920_1026640141	3300032261	Soil	SAMDLDPLRQDITAVLEECYSREMQLPFLFLAVSLDGKLIGVRFTAAEDSDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP
Ga0310914_106009721	3300033289	Soil	KLVPFCYVCIPILKAVLMLKNMSAMDPLRQDMTAVLEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQTIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS
Ga0318519_101251673	3300033290	Soil	MDPLRQDVTAVLEECYSRGMQLPYLFVAVSLDGKVMGVRFTEAEDGDGLDAQPIVGNPNALATMPMPLNVMIVDATGQATCALISGPGQVTFRYS
Ga0310810_112417671	3300033412	Soil	SLLKAFLMPKNMDPLRQDITAILEECYSRGMQLPYLFVAVSLDGRVMGVRFTEAEDGQGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFRYS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096816

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign