NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096845

Metagenome / Metatranscriptome Family F096845

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096845
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 55 residues
Representative Sequence MTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKRA
Number of Associated Samples 80
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 71.15 %
% of genes near scaffold ends (potentially truncated) 51.92 %
% of genes from short scaffolds (< 2000 bps) 88.46 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (78.846 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(59.615 % of family members)
Environment Ontology (ENVO) Unclassified
(59.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.154 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 83.33%    β-sheet: 0.00%    Coil/Unstructured: 16.67%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF06067DUF932 19.23



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.85 %
All OrganismsrootAll Organisms21.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000224|SI34jun09_10mDRAFT_1009722Not Available1979Open in IMG/M
3300001347|JGI20156J14371_10013881All Organisms → Viruses → Predicted Viral4765Open in IMG/M
3300001349|JGI20160J14292_10017132Not Available4279Open in IMG/M
3300004097|Ga0055584_101207774Not Available789Open in IMG/M
3300005512|Ga0074648_1067424All Organisms → Viruses → Predicted Viral1426Open in IMG/M
3300005941|Ga0070743_10068064All Organisms → Viruses → Predicted Viral1206Open in IMG/M
3300006810|Ga0070754_10028427All Organisms → cellular organisms → Bacteria3153Open in IMG/M
3300006868|Ga0075481_10234891Not Available649Open in IMG/M
3300006868|Ga0075481_10285160Not Available578Open in IMG/M
3300006869|Ga0075477_10333989Not Available597Open in IMG/M
3300006874|Ga0075475_10133659Not Available1098Open in IMG/M
3300006874|Ga0075475_10334701Not Available619Open in IMG/M
3300006919|Ga0070746_10332305Not Available692Open in IMG/M
3300007234|Ga0075460_10262884Not Available573Open in IMG/M
3300007539|Ga0099849_1076163Not Available1363Open in IMG/M
3300008012|Ga0075480_10429425Not Available646Open in IMG/M
3300009124|Ga0118687_10165268Not Available796Open in IMG/M
3300009438|Ga0115559_1085367All Organisms → Viruses → Predicted Viral1260Open in IMG/M
3300010135|Ga0123382_1171359All Organisms → Viruses → Predicted Viral1033Open in IMG/M
3300010149|Ga0098049_1044814Not Available1418Open in IMG/M
3300010296|Ga0129348_1052149All Organisms → Viruses → Predicted Viral1473Open in IMG/M
3300010296|Ga0129348_1077408All Organisms → Viruses → Predicted Viral1183Open in IMG/M
3300013230|Ga0116814_1008645Not Available1057Open in IMG/M
3300013230|Ga0116814_1009432Not Available1020Open in IMG/M
3300016797|Ga0182090_1803516Not Available1798Open in IMG/M
3300017746|Ga0181389_1167671Not Available578Open in IMG/M
3300017818|Ga0181565_10533176Not Available760Open in IMG/M
3300017824|Ga0181552_10044318Not Available2643Open in IMG/M
3300017824|Ga0181552_10275931Not Available837Open in IMG/M
3300017949|Ga0181584_10205641Not Available1293Open in IMG/M
3300017949|Ga0181584_10327323Not Available974Open in IMG/M
3300017949|Ga0181584_10371567Not Available900Open in IMG/M
3300017949|Ga0181584_10552896Not Available702Open in IMG/M
3300017949|Ga0181584_10680438Not Available616Open in IMG/M
3300017949|Ga0181584_10835485Not Available543Open in IMG/M
3300017950|Ga0181607_10019290Not Available5189Open in IMG/M
3300017950|Ga0181607_10172547All Organisms → Viruses → Predicted Viral1293Open in IMG/M
3300017951|Ga0181577_10836663Not Available553Open in IMG/M
3300017956|Ga0181580_10479933Not Available816Open in IMG/M
3300017957|Ga0181571_10540974Not Available708Open in IMG/M
3300017958|Ga0181582_10907427Not Available518Open in IMG/M
3300017962|Ga0181581_10280790All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300017962|Ga0181581_10537572Not Available718Open in IMG/M
3300017962|Ga0181581_10759908Not Available579Open in IMG/M
3300017964|Ga0181589_11010938Not Available503Open in IMG/M
3300017967|Ga0181590_10873725Not Available593Open in IMG/M
3300017969|Ga0181585_10701355Not Available662Open in IMG/M
3300017986|Ga0181569_10067584All Organisms → cellular organisms → Bacteria2555Open in IMG/M
3300017986|Ga0181569_10730748Not Available653Open in IMG/M
3300017986|Ga0181569_10883363Not Available582Open in IMG/M
3300018036|Ga0181600_10299001Not Available810Open in IMG/M
3300018036|Ga0181600_10453657Not Available614Open in IMG/M
3300018048|Ga0181606_10579773Not Available578Open in IMG/M
3300018048|Ga0181606_10655185Not Available535Open in IMG/M
3300018048|Ga0181606_10655186Not Available535Open in IMG/M
3300018413|Ga0181560_10067901All Organisms → Viruses → Predicted Viral2026Open in IMG/M
3300018415|Ga0181559_10478514Not Available678Open in IMG/M
3300018415|Ga0181559_10726654Not Available531Open in IMG/M
3300018417|Ga0181558_10475028Not Available654Open in IMG/M
3300018418|Ga0181567_10176459All Organisms → Viruses → Predicted Viral1469Open in IMG/M
3300018423|Ga0181593_10398703All Organisms → Viruses → Predicted Viral1027Open in IMG/M
3300018423|Ga0181593_10996414Not Available575Open in IMG/M
3300018428|Ga0181568_10066422Not Available3045Open in IMG/M
3300018876|Ga0181564_10745174Not Available514Open in IMG/M
3300019459|Ga0181562_10160436All Organisms → Viruses → Predicted Viral1213Open in IMG/M
3300020051|Ga0181555_1298968Not Available562Open in IMG/M
3300020053|Ga0181595_10172353Not Available975Open in IMG/M
3300020053|Ga0181595_10198372Not Available884Open in IMG/M
3300020174|Ga0181603_10144525All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300020174|Ga0181603_10367759Not Available534Open in IMG/M
3300020177|Ga0181596_10308617Not Available633Open in IMG/M
3300020178|Ga0181599_1181778Not Available861Open in IMG/M
3300020182|Ga0206129_10043273All Organisms → Viruses → Predicted Viral2948Open in IMG/M
3300020185|Ga0206131_10174652Not Available1089Open in IMG/M
3300020188|Ga0181605_10344212Not Available610Open in IMG/M
3300020191|Ga0181604_10285744Not Available756Open in IMG/M
3300020207|Ga0181570_10082628Not Available1845Open in IMG/M
3300020207|Ga0181570_10575777Not Available503Open in IMG/M
3300021085|Ga0206677_10003098All Organisms → cellular organisms → Bacteria14216Open in IMG/M
3300021305|Ga0210296_1084315All Organisms → Viruses → Predicted Viral1123Open in IMG/M
3300021347|Ga0213862_10148575Not Available824Open in IMG/M
3300021368|Ga0213860_10359054Not Available633Open in IMG/M
3300021957|Ga0222717_10157389Not Available1378Open in IMG/M
3300021960|Ga0222715_10040852Not Available3266Open in IMG/M
3300022900|Ga0255771_1118924Not Available1167Open in IMG/M
3300022921|Ga0255765_1180534Not Available959Open in IMG/M
3300022922|Ga0255779_1348790Not Available546Open in IMG/M
3300022934|Ga0255781_10253554Not Available826Open in IMG/M
3300022935|Ga0255780_10176970Not Available1131Open in IMG/M
3300022937|Ga0255770_10313439Not Available719Open in IMG/M
3300023087|Ga0255774_10206412All Organisms → Viruses → Predicted Viral1013Open in IMG/M
(restricted) 3300023109|Ga0233432_10034700All Organisms → Viruses → Predicted Viral3392Open in IMG/M
3300023110|Ga0255743_10447800Not Available625Open in IMG/M
3300023175|Ga0255777_10173229All Organisms → Viruses → Predicted Viral1318Open in IMG/M
3300023175|Ga0255777_10538197Not Available595Open in IMG/M
3300023178|Ga0255759_10298288Not Available1015Open in IMG/M
3300025646|Ga0208161_1125575Not Available672Open in IMG/M
3300025769|Ga0208767_1209160Not Available647Open in IMG/M
3300025771|Ga0208427_1051821Not Available1510Open in IMG/M
3300025815|Ga0208785_1122492Not Available620Open in IMG/M
3300025853|Ga0208645_1257759Not Available576Open in IMG/M
3300025892|Ga0209630_10197526Not Available981Open in IMG/M
3300029306|Ga0135212_1014918Not Available740Open in IMG/M
3300031773|Ga0315332_10715434Not Available614Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh59.62%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous14.42%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.85%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.85%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.92%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.92%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.92%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.96%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.96%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.96%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.96%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.96%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300010135Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_257_18m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300013230Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station5_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300016797Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020188Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020207Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021305Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R868 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300022922Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaGEnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300023087Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI34jun09_10mDRAFT_100972223300000224MarineMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLSQLYDLEKRA*
JGI20156J14371_1001388173300001347Pelagic MarineMTRTSIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA*
JGI20160J14292_10017132103300001349Pelagic MarineMSQASIERLNKKIRTIGYDLARAEMRGMRGGNYFARKLAHNLLLGQLYDLEKRRW*
Ga0055584_10120777423300004097Pelagic MarineMNRSRIANLNKKIRAIGYDLARAEMRGMKSGNYFARKLAHGILLNQLYDLEKRA*
Ga0074648_106742413300005512Saline Water And SedimentMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKRA*
Ga0070743_1006806453300005941EstuarineMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGNYFARKLAHGILLNQLYDLEKRA*
Ga0070754_1002842733300006810AqueousMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA*
Ga0075481_1023489123300006868AqueousMNKSRISTLNKKIRAIGYELAQADLRGMRGGNYFARKLAHNLLLDELYALEKRRW*
Ga0075481_1028516013300006868AqueousMSKASIERLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELE
Ga0075477_1033398913300006869AqueousGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKRA*
Ga0075475_1013365923300006874AqueousTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA*
Ga0075475_1033470113300006874AqueousCTLLTINERIKMNKSRIATLNKKIRAIGYELAQADLRGMRGGNYFARKLAHNLLLDELYALEKRRW*
Ga0070746_1033230533300006919AqueousMHTIHNQRKDKMSKASIERLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV*
Ga0075460_1026288413300007234AqueousRLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA*
Ga0099849_107616333300007539AqueousIANLNKKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLNQLYELEKKV*
Ga0075480_1042942523300008012AqueousANLNKKIRAIGYDLAQAEMRGMRGGSYFARKLAHNLLLNQLYELEKKV*
Ga0118687_1016526843300009124SedimentMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKR
Ga0115559_108536713300009438Pelagic MarineNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA*
Ga0123382_117135943300010135MarineMNRSRIANLNKKIRAIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELEKRA*
Ga0098049_104481423300010149MarineMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA*
Ga0129348_105214913300010296Freshwater To Marine Saline GradientMTRTSIAKLNAKLRTIGFDLAHAEMRGLKGGNYFARKLAHGILLQQLYDLEKRA*
Ga0129348_107740813300010296Freshwater To Marine Saline GradientMNRSRIANLNQKIRAIGYDLAQAEMRGMKGGNYFARKLAHGILLNQLYELEKRF*
Ga0116814_100864523300013230MarineMSKASIDRLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV*
Ga0116814_100943213300013230MarineMNRSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV*
Ga0182090_180351633300016797Salt MarshMNRSRIANLNKKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLNQLYELEKRF
Ga0181389_116767133300017746SeawaterMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFASKLAHGI
Ga0181565_1053317633300017818Salt MarshMNKTRIANLNKKIRAIGYDLAQAEMRGMRGGSYFARKLAHNLLLGQLYDLEKRRW
Ga0181552_1004431843300017824Salt MarshMNRSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLNQLYELEKRF
Ga0181552_1027593113300017824Salt MarshERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181584_1020564123300017949Salt MarshMSKASIERLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELEKRA
Ga0181584_1032732323300017949Salt MarshMNKSRIANLNKKIRAIGYDLAQAEMRGMRGGNYFARKLAHNVLLDQLYELEKRRW
Ga0181584_1037156723300017949Salt MarshMIKSRIQKLNAKLRSIGFELAQAEMRGHKGGSYFARKLAHGLLLNELYDLEKRGR
Ga0181584_1055289613300017949Salt MarshMNKSRIANLNKKIRAIGYDLAQAEMRGMRGGNYFARKLAHNVLL
Ga0181584_1068043833300017949Salt MarshMTRTSIAKLNAKLRTIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEK
Ga0181584_1083548513300017949Salt MarshANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0181607_1001929093300017950Salt MarshMIKSRIQKLNVKLRSIGFELAQAEMRGHKSGNYFARKLAHGLLLHELYELEKRGR
Ga0181607_1017254753300017950Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181577_1083666323300017951Salt MarshMNKSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0181580_1047993333300017956Salt MarshMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEK
Ga0181571_1054097433300017957Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181582_1090742723300017958Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGILLNQLYDLEKRA
Ga0181581_1028079033300017962Salt MarshMHTIHNQRKDKMSKASIERLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELEKRA
Ga0181581_1053757213300017962Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEK
Ga0181581_1075990823300017962Salt MarshMNKTRISNLNKKIRAIGYDLAQAEMRGMRGGSYFARKLAHNLLLGQLYDLEKRRW
Ga0181589_1101093813300017964Salt MarshCTLLTINERIKMNKARIDTLNKKIRAIGFNLAHAELRGLRGGQYFAQRLAHNLLLNQLYELEKKV
Ga0181590_1087372533300017967Salt MarshMSKASIERLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYEL
Ga0181585_1070135513300017969Salt MarshLIMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEK
Ga0181569_1006758463300017986Salt MarshMHTTHNQRKDKMNKSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0181569_1073074813300017986Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181569_1088336313300017986Salt MarshLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0181600_1029900143300018036Salt MarshMNRSRIANLNKKIRAIGYDLAQAEMRGMRSGNYFARKLAHGILLNQLYDLEKRA
Ga0181600_1045365713300018036Salt MarshGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181606_1057977313300018048Salt MarshIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181606_1065518533300018048Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQ
Ga0181606_1065518633300018048Salt MarshMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQ
Ga0181560_1006790123300018413Salt MarshMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181559_1047851413300018415Salt MarshSQRGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181559_1072665423300018415Salt MarshAKLRSIGFDLAHAEMRGFKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181558_1047502823300018417Salt MarshLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181567_1017645913300018418Salt MarshSGGTRSLRILFTTNERHTMSKAGIERLNKKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKRV
Ga0181593_1039870313300018423Salt MarshMIKSRIQKLNAKLRSIGFELAQAEMRGHKGGSYFARKLAHGLLLNELYDLEKR
Ga0181593_1099641423300018423Salt MarshMNRSRIAKLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLNQLYELEKRF
Ga0181568_1006642283300018428Salt MarshMKPMHTIHNQRKDKMNKTRIANLNKKIRAIGYDLAQAEMRGMRGGSYFARKLAHNLLLGQLYDLEKRRW
Ga0181564_1074517413300018876Salt MarshLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181562_1016043613300019459Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGFKGGNYFARKLAHGLLLQQLYELEKRA
Ga0181555_129896813300020051Salt MarshTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKR
Ga0181595_1017235323300020053Salt MarshGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181595_1019837213300020053Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYD
Ga0181603_1014452513300020174Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARK
Ga0181603_1036775913300020174Salt MarshMNRSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLN
Ga0181596_1030861713300020177Salt MarshLCTLRTTNERLIMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181599_118177813300020178Salt MarshNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYELEKRA
Ga0206129_1004327343300020182SeawaterMTRTSIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA
Ga0206131_1017465223300020185SeawaterMSQASIERLNKKIRTIGYDLARAEMRGMRGGNYFARKLAHNLLLGQLYDLEKRRW
Ga0181605_1034421213300020188Salt MarshIALRFIRLSSTSQRGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181604_1028574433300020191Salt MarshMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0181570_1008262833300020207Salt MarshMNRSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0181570_1057577713300020207Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELE
Ga0206677_10003098233300021085SeawaterMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGNYFARKLAHGILLNQLYDLEKRA
Ga0210296_108431513300021305EstuarineMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLSQLYDLEKRA
Ga0213862_1014857543300021347SeawaterMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA
Ga0213860_1035905413300021368SeawaterMNKSRIANLNKKIRAIGYELAQAEMRGMRGGSYFARKLAHNVLLDQLYELEKRRW
Ga0222717_1015738923300021957Estuarine WaterMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFASKLAHGILLNQLYDLEKRA
Ga0222715_1004085233300021960Estuarine WaterMHTIHNQRKDKMSKASIERLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0255771_111892423300022900Salt MarshSTSQRGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLLQQLYELEKRA
Ga0255765_118053443300022921Salt MarshMNRSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHGILLNQLYELEK
Ga0255779_134879033300022922Salt MarshMTRTGIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARK
Ga0255781_1025355443300022934Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGL
Ga0255780_1017697023300022935Salt MarshMRLMHTIHNQRKDKMSKASIERLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELEKRA
Ga0255770_1031343933300022937Salt MarshMIKSRIQKLNAKLRSIGFELAQAEMRGHKGGSYFARKLAHGLLLNELYDLEKRG
Ga0255774_1020641213300023087Salt MarshMHTTHNQRKDKMNKSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHN
(restricted) Ga0233432_1003470013300023109SeawaterMTRTSIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYD
Ga0255743_1044780013300023110Salt MarshMTRTSIAKLNAKLRSIGFDLAHAEMRGMKGGNYFARKLAHGLLL
Ga0255777_1017322963300023175Salt MarshMHTTHNQRKDKMNKSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYE
Ga0255777_1053819713300023175Salt MarshDKMNKSRIANLNQKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKKV
Ga0255759_1029828813300023178Salt MarshMSKAGIERLNKKIRAIGYDLAQAEMRGMKSGNYFARKLAHNLLLNQLYELEKRV
Ga0208161_112557513300025646AqueousTSQRGLCTLLTTNERLIMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLYDLEKRA
Ga0208767_120916033300025769AqueousMNRSRIANLNKKIRAIGYDLAQAEMRGMRSGNYFARKLAHGILLNQLYDLEKRAXLVN
Ga0208427_105182133300025771AqueousMNKSRISTLNKKIRAIGYELAQADLRGMRGGNYFARKLAHNLLLDELYALEKRRW
Ga0208785_112249213300025815AqueousLNQKIRTIGYDLAQAEMRGMKSGNYFARKLAHGLLLQQLYELEKRA
Ga0208645_125775933300025853AqueousMTRTSIAKLNAKLRSIGFDLAHAEMRGLKGGNYFARKLAHGLLLQQLY
Ga0209630_1019752613300025892Pelagic MarineMTRTSIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKL
Ga0135212_101491823300029306Marine HarborFSKRLFPSHDQRKDKMNKTRIANLNKKIRAIGYDLAQAEMRGMRGGSYFARKLAHNLLLNQLYELEKKV
Ga0315332_1071543423300031773SeawaterPLFTTNERVIMSTNGIAKLNAKLRTIGFQLAQAEMRGMKGGSYFARKLAHGILLNQLYDLEKRA


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