NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096901

Metagenome / Metatranscriptome Family F096901

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096901
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 52 residues
Representative Sequence MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE
Number of Associated Samples 76
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.88 %
% of genes near scaffold ends (potentially truncated) 18.27 %
% of genes from short scaffolds (< 2000 bps) 59.62 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.462 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(36.538 % of family members)
Environment Ontology (ENVO) Unclassified
(44.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.308 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 17.50%    β-sheet: 25.00%    Coil/Unstructured: 57.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.45.1.2: Adaptor protein ClpS (YljA)d3dnja_3dnj0.73519
d.58.29.0: automated matchesd2wz1a_2wz10.70586
d.45.1.0: automated matchesd4yjma_4yjm0.69817
d.58.8.1: Viral DNA-binding domaind6vh6a16vh60.69688
d.45.1.0: automated matchesd7d34a17d340.6918


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF03332PMM 30.77
PF01467CTP_transf_like 17.31
PF03721UDPG_MGDP_dh_N 3.85
PF03104DNA_pol_B_exo1 2.88
PF00156Pribosyltran 2.88
PF13203DUF2201_N 1.92
PF04055Radical_SAM 1.92
PF01370Epimerase 1.92
PF00136DNA_pol_B 1.92
PF11753DUF3310 0.96
PF07460NUMOD3 0.96
PF02608Bmp 0.96
PF16861Carbam_trans_C 0.96
PF137592OG-FeII_Oxy_5 0.96
PF01471PG_binding_1 0.96
PF04820Trp_halogenase 0.96
PF08282Hydrolase_3 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 31.73
COG0417DNA polymerase B elongation subunitReplication, recombination and repair [L] 4.81
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 3.85
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 3.85
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 3.85
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 3.85
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 3.85
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 0.96
COG1744Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupNSignal transduction mechanisms [T] 0.96
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 0.96
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.96
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.46 %
All OrganismsrootAll Organisms36.54 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000369|P_2C_Liq_3_UnCtyDRAFT_101160Not Available6975Open in IMG/M
3300000401|BB_Man_B_Liq_inBBDRAFT_1010054Not Available1356Open in IMG/M
3300000401|BB_Man_B_Liq_inBBDRAFT_1036540Not Available549Open in IMG/M
3300000418|P_2C_Liq_1_UnCtyDRAFT_1003210Not Available5288Open in IMG/M
3300000418|P_2C_Liq_1_UnCtyDRAFT_1007069All Organisms → Viruses → Predicted Viral3086Open in IMG/M
3300000418|P_2C_Liq_1_UnCtyDRAFT_1023135All Organisms → Viruses → Predicted Viral1282Open in IMG/M
3300001352|JGI20157J14317_10152986Not Available716Open in IMG/M
3300003345|JGI26080J50196_1051688Not Available787Open in IMG/M
3300003346|JGI26081J50195_1112707Not Available508Open in IMG/M
3300003409|JGI26088J50261_1003716Not Available7089Open in IMG/M
3300003409|JGI26088J50261_1068181Not Available611Open in IMG/M
3300003427|JGI26084J50262_1076817Not Available720Open in IMG/M
3300003621|JGI26083J51738_10091834Not Available654Open in IMG/M
3300003621|JGI26083J51738_10119458Not Available552Open in IMG/M
3300005512|Ga0074648_1229856Not Available500Open in IMG/M
3300006025|Ga0075474_10000689Not Available13287Open in IMG/M
3300006802|Ga0070749_10725143Not Available530Open in IMG/M
3300007276|Ga0070747_1028274All Organisms → Viruses → Predicted Viral2243Open in IMG/M
3300007344|Ga0070745_1007882All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae5223Open in IMG/M
3300007539|Ga0099849_1000224Not Available25023Open in IMG/M
3300007539|Ga0099849_1031788Not Available2256Open in IMG/M
3300007609|Ga0102945_1000165Not Available20885Open in IMG/M
3300007609|Ga0102945_1012264All Organisms → Viruses → Predicted Viral2021Open in IMG/M
3300009071|Ga0115566_10488836Not Available699Open in IMG/M
3300009074|Ga0115549_1181437Not Available676Open in IMG/M
3300009495|Ga0115571_1005188Not Available7839Open in IMG/M
3300009495|Ga0115571_1296315Not Available644Open in IMG/M
3300009496|Ga0115570_10142013Not Available1130Open in IMG/M
3300009496|Ga0115570_10211460Not Available872Open in IMG/M
3300009507|Ga0115572_10069062All Organisms → Viruses → Predicted Viral2180Open in IMG/M
3300010296|Ga0129348_1266217All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota575Open in IMG/M
3300016747|Ga0182078_10061712All Organisms → Viruses → Predicted Viral1348Open in IMG/M
3300017719|Ga0181390_1022080Not Available2065Open in IMG/M
3300017751|Ga0187219_1042643All Organisms → Viruses → Predicted Viral1532Open in IMG/M
3300017818|Ga0181565_10075990All Organisms → Viruses → Predicted Viral2398Open in IMG/M
3300017818|Ga0181565_10079305All Organisms → Viruses → Predicted Viral2342Open in IMG/M
3300017818|Ga0181565_10368682Not Available952Open in IMG/M
3300017818|Ga0181565_10606631Not Available701Open in IMG/M
3300017818|Ga0181565_10701972Not Available642Open in IMG/M
3300017949|Ga0181584_10068639Not Available2468Open in IMG/M
3300017949|Ga0181584_10652734Not Available633Open in IMG/M
3300017950|Ga0181607_10001880Not Available18733Open in IMG/M
3300017951|Ga0181577_10523759Not Available739Open in IMG/M
3300017952|Ga0181583_10078334All Organisms → Viruses → Predicted Viral2289Open in IMG/M
3300017958|Ga0181582_10298504All Organisms → Viruses → Predicted Viral1056Open in IMG/M
3300017962|Ga0181581_10599545Not Available671Open in IMG/M
3300017964|Ga0181589_10562148Not Available730Open in IMG/M
3300017967|Ga0181590_10060818All Organisms → Viruses → Predicted Viral3003Open in IMG/M
3300017967|Ga0181590_10253594All Organisms → Viruses → Predicted Viral1298Open in IMG/M
3300017967|Ga0181590_10819852Not Available618Open in IMG/M
3300017969|Ga0181585_10128923All Organisms → Viruses → Predicted Viral1870Open in IMG/M
3300017985|Ga0181576_10350405Not Available931Open in IMG/M
3300018036|Ga0181600_10404418Not Available662Open in IMG/M
3300018041|Ga0181601_10383536Not Available755Open in IMG/M
3300018048|Ga0181606_10390044Not Available747Open in IMG/M
3300018049|Ga0181572_10340421All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5947Open in IMG/M
3300018421|Ga0181592_10626714Not Available726Open in IMG/M
3300018424|Ga0181591_10029945Not Available4644Open in IMG/M
3300018424|Ga0181591_10681888All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5725Open in IMG/M
3300019261|Ga0182097_1073463Not Available586Open in IMG/M
3300019276|Ga0182067_1025822All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota773Open in IMG/M
3300019459|Ga0181562_10388008Not Available677Open in IMG/M
3300019765|Ga0194024_1002161All Organisms → Viruses → Predicted Viral4040Open in IMG/M
3300020055|Ga0181575_10042616All Organisms → Viruses → Predicted Viral2915Open in IMG/M
3300020185|Ga0206131_10002595Not Available21653Open in IMG/M
3300020185|Ga0206131_10272132Not Available775Open in IMG/M
3300021335|Ga0213867_1000357Not Available20727Open in IMG/M
3300021364|Ga0213859_10022724All Organisms → Viruses → Predicted Viral2925Open in IMG/M
3300021364|Ga0213859_10024314All Organisms → Viruses → Predicted Viral2833Open in IMG/M
3300021364|Ga0213859_10043492All Organisms → Viruses → Predicted Viral2131Open in IMG/M
3300021364|Ga0213859_10194419All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium942Open in IMG/M
3300021364|Ga0213859_10480793All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota541Open in IMG/M
3300021368|Ga0213860_10025666All Organisms → Viruses → Predicted Viral2463Open in IMG/M
3300021368|Ga0213860_10120241Not Available1153Open in IMG/M
3300021373|Ga0213865_10046138All Organisms → Viruses → Predicted Viral2420Open in IMG/M
3300021375|Ga0213869_10173825Not Available988Open in IMG/M
3300021960|Ga0222715_10306607Not Available900Open in IMG/M
3300022187|Ga0196899_1001878Not Available10072Open in IMG/M
3300022187|Ga0196899_1049321All Organisms → Viruses → Predicted Viral1388Open in IMG/M
3300022921|Ga0255765_1000028Not Available147208Open in IMG/M
3300022935|Ga0255780_10322334Not Available721Open in IMG/M
3300023081|Ga0255764_10231233Not Available891Open in IMG/M
3300023084|Ga0255778_10309292Not Available721Open in IMG/M
3300023119|Ga0255762_10001637Not Available19082Open in IMG/M
3300023119|Ga0255762_10353262Not Available742Open in IMG/M
3300023176|Ga0255772_10079196All Organisms → Viruses → Predicted Viral2140Open in IMG/M
3300023180|Ga0255768_10069795Not Available2481Open in IMG/M
3300024267|Ga0228623_1007802All Organisms → Viruses → Predicted Viral2550Open in IMG/M
3300025608|Ga0209654_1015593All Organisms → Viruses → Predicted Viral3013Open in IMG/M
3300025626|Ga0209716_1000772Not Available27633Open in IMG/M
3300025626|Ga0209716_1126138Not Available692Open in IMG/M
3300025636|Ga0209136_1046197All Organisms → Viruses → Predicted Viral1495Open in IMG/M
3300025671|Ga0208898_1116636Not Available779Open in IMG/M
3300025695|Ga0209653_1008163Not Available5964Open in IMG/M
3300025696|Ga0209532_1204214Not Available561Open in IMG/M
3300025701|Ga0209771_1038208All Organisms → Viruses → Predicted Viral1849Open in IMG/M
3300025704|Ga0209602_1163663Not Available699Open in IMG/M
3300025880|Ga0209534_10009892All Organisms → cellular organisms → Bacteria7816Open in IMG/M
3300025880|Ga0209534_10356319All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium650Open in IMG/M
3300026097|Ga0209953_1000564Not Available13039Open in IMG/M
3300026097|Ga0209953_1023354All Organisms → Viruses → Predicted Viral1053Open in IMG/M
3300026483|Ga0228620_1039701All Organisms → Viruses → Predicted Viral1103Open in IMG/M
3300031851|Ga0315320_10685988Not Available660Open in IMG/M
3300034374|Ga0348335_000018Not Available240421Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh36.54%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater11.54%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine10.58%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous9.62%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine9.62%
EnviromentalEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental3.85%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.85%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.85%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.92%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.92%
Bioluminescent BayEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Bioluminescent Bay1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.96%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.96%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000369Marine microbial community from Union City, CA, USA - Pond 2C Liquid 3EnvironmentalOpen in IMG/M
3300000401Marine microbial community from La Parguera, Puerto Rico - BB Mangrove B LiquidEnvironmentalOpen in IMG/M
3300000418Marine microbial community from Union City, CA, USA - Pond 2C Liquid 1EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300003345Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNAEnvironmentalOpen in IMG/M
3300003346Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNAEnvironmentalOpen in IMG/M
3300003409Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003621Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNAEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019261Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019276Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023119Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024267Seawater microbial communities from Monterey Bay, California, United States - 28DEnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P_2C_Liq_3_UnCtyDRAFT_10116033300000369EnviromentalMWTLWIVSTVIGSTEPKLTRYSEYETAMSCYVEQAIQEVHFTQGETAFCEEG*
BB_Man_B_Liq_inBBDRAFT_101005453300000401Bioluminescent BayMWTLWIVSSVIGSAEPKLTRYETFETAMSCHIKQTVLEAEFTQGEKAFCSDE*
BB_Man_B_Liq_inBBDRAFT_103654033300000401Bioluminescent BayMWTLWIVSSVIGSAEPKLTRYETFETAMSCHIEQAVLEAEFSQGEKAFCSDE*
P_2C_Liq_1_UnCtyDRAFT_100321043300000418EnviromentalMWTLWIVSSVIGSTEPKVTRYAEFETTMSCHIEQGIVEENFTQGEKAFCTDER*
P_2C_Liq_1_UnCtyDRAFT_100706943300000418EnviromentalMWTLWIVSSVIGSAEPKYTRYAEYETAMSCHIEQAVVEVNFTQGETAFCEEG*
P_2C_Liq_1_UnCtyDRAFT_102313533300000418EnviromentalMWTLWIVSSVIGSTEPKVTRYAEFETTMSCHIEKAVVEVNFTQGETAFCKESNE*
JGI20157J14317_1015298633300001352Pelagic MarineMWTLWIISTIVNHVEPKYTRYAEFETAMSCQIEQAVVEVIFTQNEIAYCEKNND*
JGI26080J50196_105168823300003345MarineMWTLLIISTVIVIGLDEPKVTRYAEYDTAMSCHIEQAVVETTFTQNETAFCKEIK*
JGI26081J50195_111270723300003346MarineMWTLWIVSSVIGSTEPKYTRYEEFETSTSCHIEQAVLETEFIQHEKAFCINE*
JGI26088J50261_100371633300003409MarineMWTLWIVSTVIGLEEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE*
JGI26088J50261_106818113300003409MarineMWTLWIVSSVIGGTEPKVTRYKEFGTAMSCHIEQAVLEVNFTQGETAFCKGKESK*
JGI26084J50262_107681713300003427MarineMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAFCTDD*
JGI26083J51738_1009183413300003621MarineMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAF
JGI26083J51738_1011945813300003621MarineMWTLWIVSSVIGSTEPKYTRYEEFETSTSCHIEQAVLETEFIQHEKAFCINE
Ga0074648_122985623300005512Saline Water And SedimentMDRISMGVQLMWTLWIVSTIVDSAEPKYTRYAEFETAMSCHIEQAVVEVTFTQNEIAYCEKNND*
Ga0075474_1000068923300006025AqueousMWTLWIISSVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE*
Ga0070749_1072514333300006802AqueousMWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTDD*
Ga0070747_102827443300007276AqueousMWTLWIVSTVIGSAEPKLTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE*
Ga0070745_100788223300007344AqueousVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE*
Ga0099849_1000224243300007539AqueousMWTLWIVSSVIDSTEPKYTRYETFETAMSCHIEQAVLETSFTEGEKAFCSDE*
Ga0099849_103178843300007539AqueousMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE*
Ga0102945_100016563300007609Pond WaterMWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAIQEVQFTQGETAFCEED*
Ga0102945_101226423300007609Pond WaterMWTLWIVSSIINSAEPKYTRYAEFETSMSCSIEKAFLEIEFKSNEVAFCSYE*
Ga0115566_1048883633300009071Pelagic MarineMWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE*
Ga0115549_118143723300009074Pelagic MarineMWTLWIVSTVIGLEEPKVTHYAEFETAMSCHSEQAVLETMFENNEVAYCDYE*
Ga0115571_100518823300009495Pelagic MarineMWTLWIVSSVIYSIEPKYTRYEEFETAMSCHIEQAVLETEFIQNEKAFCINE*
Ga0115571_129631533300009495Pelagic MarineMWTLWIVSSVIGSTEPKVTRYAEFETTMSCYIKQAIVEENFTQGETAFCEEG*
Ga0115570_1014201333300009496Pelagic MarineMWTLWIVSSVIGSTEPKVTRYAEFETAMSCHIEQAIVEENFTQGETAFCKEG*
Ga0115570_1021146033300009496Pelagic MarineMWTLWIVSTVIGSTEPKYTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG*
Ga0115572_1006906253300009507Pelagic MarineMWTLWIVSTVIGITEPKYTRYAEFETAMSCHIEQAVQEIYFTQGEVAFCDYE*
Ga0129348_126621733300010296Freshwater To Marine Saline GradientMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTEGEKVVCTNE*
Ga0182078_1006171233300016747Salt MarshTMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0181390_102208033300017719SeawaterMIWTLWIVSSVIGSTEPKYTRYKEFETAMSCYTEQVVVEVNFTQGEEAFCTNE
Ga0187219_104264343300017751SeawaterMRSMIWTLWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE
Ga0181565_1007599033300017818Salt MarshMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDE
Ga0181565_1007930523300017818Salt MarshMWTLWIVSSVIGSAEPKLTRYETFETAMSCHIEQAVLEAEFTQGEKAFCSDE
Ga0181565_1036868223300017818Salt MarshMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0181565_1060663123300017818Salt MarshMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLEATFENNEVAICTEQRNFK
Ga0181565_1070197213300017818Salt MarshMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE
Ga0181584_1006863933300017949Salt MarshMWTLWVISTIIDSTEPKYTRYAEYESAMSCHIQQAVLETNFTQGETAFCAEE
Ga0181584_1065273433300017949Salt MarshMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCSDE
Ga0181607_10001880173300017950Salt MarshMSMWTLWIVSSVIGSAEPKYTRYETFETQKECLLERAVLTSTFTQGERAFCEGTNE
Ga0181577_1052375913300017951Salt MarshMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE
Ga0181583_1007833453300017952Salt MarshMWTLWVISTIIDSTEPKYTRYAEYESAMSCHIQQAVLETNFTEGETAFCAEE
Ga0181582_1029850413300017958Salt MarshMWTLWIISSVIGSTEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE
Ga0181581_1059954513300017962Salt MarshMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCT
Ga0181589_1056214813300017964Salt MarshMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTNGEKAFCTDE
Ga0181590_1006081873300017967Salt MarshMWTLWIISSVIESAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDK
Ga0181590_1025359423300017967Salt MarshMWALWIVSSVIGSAEPKYTLYETFETAMSCHIEQAVLETTFTEGEVAFCKGKED
Ga0181590_1081985213300017967Salt MarshVIGSAEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE
Ga0181585_1012892313300017969Salt MarshMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE
Ga0181576_1035040533300017985Salt MarshLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE
Ga0181600_1040441843300018036Salt MarshMWTLWIVSSVIGSTEPKYTHYAEFETSMSCHIEQAVLETMFENNEVAFCEEVLDMK
Ga0181601_1038353623300018041Salt MarshMWTLWIVSSVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEGLDMK
Ga0181606_1039004443300018048Salt MarshMWTLWIVSSVIGSTEPKYTRYEEFETAMSCHIEQAVLEANFTHSETAFCEEGLDMK
Ga0181572_1034042133300018049Salt MarshMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE
Ga0181592_1062671423300018421Salt MarshRLMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE
Ga0181591_1002994553300018424Salt MarshMSMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE
Ga0181591_1068188823300018424Salt MarshMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDD
Ga0182097_107346333300019261Salt MarshWTLWTVSSVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEGLDMK
Ga0182067_102582233300019276Salt MarshMWTLWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0181562_1038800813300019459Salt MarshMWTLWIISSIIGSAEPKLTRYETFETDMSCHIEQAVLEAEFTQGEKAFCN
Ga0194024_100216143300019765FreshwaterMWTLWIVSSVIDSTEPKYTRYETFETAMSCHIEQAVLETSFTEGEKAFCSDE
Ga0181575_1004261623300020055Salt MarshMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE
Ga0206131_10002595223300020185SeawaterMWTLWIVSSVIYSIEPKYTRYEEFETAMSCHIEQAVLETEFIQNEKAFCINE
Ga0206131_1027213223300020185SeawaterMWTLWIVSTVIGITEPKYTRYAEFETAMSCHIEQAVQEIYFTQGEVAFCDYE
Ga0213867_100035763300021335SeawaterMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVICTDE
Ga0213859_1002272443300021364SeawaterMWTLWIVSSVIGSVEPKYTQYETFETAMSCHIEQAVLEISFTESEVAYCEGPDE
Ga0213859_1002431443300021364SeawaterMWTLWIISSVIDSAEPKLTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE
Ga0213859_1004349223300021364SeawaterMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFIEGETALCAEE
Ga0213859_1019441943300021364SeawaterMWTLWIISSIIDSAEPKYTRYAEYESAMSCHIQQAVLETNFTEGET
Ga0213859_1048079323300021364SeawaterMWTLWIVSSVIGSVEPKYTQYETFETAMSCHIEQAVLEADFTQGEKAFCTDE
Ga0213860_1002566643300021368SeawaterTRLMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0213860_1012024123300021368SeawaterMCVDQGESVMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEEAFCTD
Ga0213865_1004613823300021373SeawaterMWALWIVSSVIGSAEPKYTLYETFETAMSCHIEQAVLETSFTEGEKVVCTNE
Ga0213869_1017382543300021375SeawaterMWTLWIVSTVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEVLDMK
Ga0222715_1030660733300021960Estuarine WaterMWTLWIISSVIDSAEPKYTRYAEFETAMSCHIEQAVVEVNFTQGETAFCKELNE
Ga0196899_1001878123300022187AqueousMWTLWIISSVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE
Ga0196899_104932113300022187AqueousMCLDQGESVMWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTD
Ga0255765_1000028623300022921Salt MarshMWTLWIVSSVIGSAEPKYTRYETFETQKECLLERAVLTSTFTQGERAFCEGTNE
Ga0255780_1032233423300022935Salt MarshWTLWIISSVIDSVEPKYTRYETFETATSCHIEQAVLEADFTHGEKAFCTDE
Ga0255764_1023123313300023081Salt MarshLWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0255778_1030929213300023084Salt MarshWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0255762_10001637323300023119Salt MarshMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDK
Ga0255762_1035326223300023119Salt MarshRKREWVMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE
Ga0255772_1007919643300023176Salt MarshMWTLWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKV
Ga0255768_1006979553300023180Salt MarshWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE
Ga0228623_100780223300024267SeawaterMWILWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE
Ga0209654_101559333300025608MarineMWTLWIVSSVIGGTEPKVTRYKEFGTAMSCHIEQAVLEVNFTQGETAFCKGKESK
Ga0209716_1000772163300025626Pelagic MarineMWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE
Ga0209716_112613823300025626Pelagic MarineMWTLWIVSTVIGSAEPKYTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG
Ga0209136_104619733300025636MarineMWTLWIVSTVIGSAEPKLTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG
Ga0208898_111663623300025671AqueousMWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTDD
Ga0209653_100816333300025695MarineMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAFCTDD
Ga0209532_120421413300025696Pelagic MarineMWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQVVLETMFENNEVAYCDYE
Ga0209771_103820833300025701MarineMWTLWIVSSIIDSTEPKYTRYAEFETAMSCHIEQAVQEIYFTQDEVAFCDYE
Ga0209602_116366323300025704Pelagic MarineMWTLWIVSSVIGSTEPKVTRYAEFETAMSCHIEQAIVEENFTQGETAFCKEG
Ga0209534_10009892123300025880Pelagic MarineMWTLWIISTIVNHVEPKYTRYAEFETAMSCQIEQAVVEVIFTQNEIAYCEKNND
Ga0209534_1035631923300025880Pelagic MarineMWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAFQEVHFTQGETAFCEEG
Ga0209953_100056463300026097Pond WaterMWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAIQEVQFTQGETAFCEED
Ga0209953_102335423300026097Pond WaterMWTLWIVSSIINSAEPKYTRYAEFETSMSCSIEKAFLEIEFKSNEVAFCSYE
Ga0228620_103970123300026483SeawaterMWTLWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE
Ga0315320_1068598823300031851SeawaterVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE
Ga0348335_000018_38217_383543300034374AqueousVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE


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