Metagenome Family F096954

Basic Information
Family ID	F096954
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	57 residues
Representative Sequence	ALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPWWPSPSL
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.885 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.51% β-sheet: 0.00% Coil/Unstructured: 53.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01613	Flavin_Reduct	29.81
PF00270	DEAD	23.08
PF02861	Clp_N	6.73
PF02659	Mntp	6.73
PF04140	ICMT	3.85
PF00271	Helicase_C	1.92
PF08494	DEAD_assoc	1.92
PF01790	LGT	0.96
PF02683	DsbD	0.96
PF00324	AA_permease	0.96
PF02151	UVR	0.96
PF04055	Radical_SAM	0.96
PF01029	NusB	0.96
PF12681	Glyoxalase_2	0.96
PF03466	LysR_substrate	0.96
PF00903	Glyoxalase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	29.81
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	6.73
COG1971	Putative Mn2+ efflux pump MntP	Inorganic ion transport and metabolism [P]	6.73
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	1.92
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.96
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.96
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.96
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.19%
Plants	Host-Associated → Plants	2.88%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Sediment	Environmental → Aquatic → Sediment	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Clay	Environmental → Terrestrial → Soil → Clay	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.92%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066674_102937712	3300005166	Soil	LVLALGLANTRPLLDYVNAHRRAIDIASAAVLVVMGVLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0066672_102512611	3300005167	Soil	FALESARSLIRFVNNHRRAIDLASAAVLVLMGVLLLTNRLTWLSAGLTQLVPSWPSPSL*
Ga0066680_106928601	3300005174	Soil	LAFALQGARPLVTFVNHHRRAIDLASAGVLAVMGVLLLTNRLTWLSAGLVQLIPSWPSPSI*
Ga0066688_103795702	3300005178	Soil	LALALEGARPLIRFVNEHRRAIDLASAGVLVAMGLLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0066688_104786101	3300005178	Soil	LENARPLVIYVSVHRRAIDLASAAVLVVMGILLLTNRLTWLSAGLTQLIPSWPSPSL*
Ga0066688_104959662	3300005178	Soil	GLPFIALAFMLEKARPLIRMVNEHRRAIDLVSAGVLVAMGVLLLTNHLALLSSGITQLVPGWPSGAL*
Ga0066685_101430003	3300005180	Soil	VPFIALAFALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPWWPSPSL*
Ga0066678_102967692	3300005181	Soil	ALAFALENARPLVRFVNENRRAIDLASAAVLVVMGVLLLTNNLTILSAGITQLVPWWPSPSL*
Ga0066676_108315101	3300005186	Soil	LRFVNAHRRAIDIASAAVLVVMGILLLTNNLTLLSAGLTQLIPSWPSPSL*
Ga0070714_1016167062	3300005435	Agricultural Soil	LVNNHRRAIDLASAAILVVMGVLLLTNRLSILSAGITQLVPSWPSPTL*
Ga0066682_101678102	3300005450	Soil	PFLALAFALESARPLLRFVNAHRRAIDIASAAVLVVMGILLLTNNLTLLSAGLTQLIPSWPSPSL*
Ga0070707_1007602931	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IVLAFALESTRPLVRVINSHRRAIDLISAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0070707_1007700592	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVNSHRRAIDLASAAVLLVMGMLLLTNKLTVLAAGLTQLVPGWPSPTI*
Ga0066695_107374872	3300005553	Soil	NTRPLLDYVNAHRRAIDITSAAVLVVMGVLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0066692_100100581	3300005555	Soil	LVRFVNAHRRAIDLGSAAVLVVMGVLLLTNNLTLLSAGLTQLVPNWPSPSL*
Ga0066692_107571202	3300005555	Soil	LESARPLVGLVNRHRRAIDLASAAVLLVMGLLLLTNKLTILAAGISQLVPSWPSPTI*
Ga0066707_100334521	3300005556	Soil	LPFLALAFGLENARPLVIYVSVHRRAIDLASAAVLVVMGILLLTNRLTWLSAGLTQLIPSWPSPSL*
Ga0066704_105103431	3300005557	Soil	NSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPWWPSPSL*
Ga0066704_110486992	3300005557	Soil	LVRVVNSHRRAIDLVSAAVLLVMGVLLLTNKLTLLSAGLTQLIPSWPNPTL*
Ga0066699_103615641	3300005561	Soil	AVGLENARPLVVYVNAHRRAIDLASAAVLVVMGLLLVLNKLSWLSAGLVQLIPSWPSPSL
Ga0066705_100766271	3300005569	Soil	ARPLIRMVNEHRRAIDLVSAGVLVAMGVLLLTNHLALLSSGITQLVPGWPSGAL*
Ga0066694_103329971	3300005574	Soil	ALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPWWPSPSL*
Ga0066702_109825141	3300005575	Soil	RPLVRFVNENRRAIDLASAAVLVVMGVLLLTNNLTILSAGITQLVPWWPSPSL*
Ga0066708_103282821	3300005576	Soil	TGPLMRAVNRHRRVIDLASAAVLVAMGLLLITNNLALLSSGITQLVPNWPSPTL*
Ga0075017_1008880461	3300006059	Watersheds	INRHRRAIDLVSAAVLLVMGVLLLMNRMTLLSSGLSQLFPWWPSPTI*
Ga0066659_111971672	3300006797	Soil	PLIRFVNEHRRAIDLASAGVLVAMGLLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0066660_106792772	3300006800	Soil	LALGLASTRPLLDFVNAHRRAIDIGSAAVLVVMGVLLLTNRLSWLSAGLTQLIPWWPSPTL*
Ga0079220_100494771	3300006806	Agricultural Soil	FAFEGTRPLIAFVNQHRRAIDIASAAVLMVMGVLLLTDRLTWLSAGLVQLVPSWPSPSL*
Ga0079220_121151131	3300006806	Agricultural Soil	AFGLENARPLIAYVNAHRRAIDLASAAVLVVMGLLLLTNRLTWLSAGLVQLIPSWPSPSL
Ga0075425_1026404002	3300006854	Populus Rhizosphere	VGWVNDHRRAIDLASAGVLGVMGLLLLTNNLTILSAGLTQLVPNWPSPTL*
Ga0075426_100754634	3300006903	Populus Rhizosphere	LALGLANTRPLLDYVNAHRRAIDIASAAVLMVMGVLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0075424_1017569912	3300006904	Populus Rhizosphere	ESARPLIVFVTAHRRAIDLGSAAVLLVMGILLLTNNLTLLSAGLTQLVPGWPSPSL*
Ga0099791_106168701	3300007255	Vadose Zone Soil	EGARPLVTFVNDHRRAIDLASAGVLVVMGVLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0099794_100224605	3300007265	Vadose Zone Soil	TFVNSHRRAIDLASAAVLLVMGVLLLANKLTWLSAGLTQLIPNWPSPSL*
Ga0066710_1018650973	3300009012	Grasslands Soil	RPLVLYVNSHRRVIDYASAAVLVVMGLLLLTNQLYILSTGITQLVPSWPSPTL
Ga0066710_1025311172	3300009012	Grasslands Soil	LYVNSHRRVIDYASAAVLLVMGLLLLTNQLYILSTGITQLVPSWPSPTL
Ga0066793_102507951	3300009029	Prmafrost Soil	NSHRRAIDLVSAAILLVMGVLLLTNKLTVLSASLSQLVPGWPNPTL*
Ga0099829_105891323	3300009038	Vadose Zone Soil	FVVLAFALESTRPLVRVINSHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0099830_116428141	3300009088	Vadose Zone Soil	PLVRVINSHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0099830_118669622	3300009088	Vadose Zone Soil	VVLAFALESTRPLVRVINSHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0099828_103393473	3300009089	Vadose Zone Soil	LESTRPLVRVINSHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0099828_103815953	3300009089	Vadose Zone Soil	LAFALESTRPLVRVINSHRRAIDLVSAVVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0099828_108273602	3300009089	Vadose Zone Soil	RPLVRVVNSHRRAIDLASAAILLVMGLLLLMNKLTILSAGLSQLVPGWPNPTL*
Ga0134065_102995791	3300010326	Grasslands Soil	RFVNENRRAIDLASAAVLVVMGVLLLTNNLTILSAGITQLVPWWPSPSL*
Ga0134065_103203101	3300010326	Grasslands Soil	VRFVNAHRRAIDLGSAVVLVVMGILLLTNNLTLLSAGLTQLIPSWPSPSL*
Ga0126379_136426222	3300010366	Tropical Forest Soil	EGARPLLRFVNNHRRAIDIASAAVLLVMGVLLLTNRLTWLSAGLTQLIPNWPSPTL*
Ga0126379_138829661	3300010366	Tropical Forest Soil	LAFGLENARPLVAYVNAHRRAIDLASAAVLVVMGILLLTNRLSWLSAGVVQLIPSWPSPSL*
Ga0137393_118042461	3300011271	Vadose Zone Soil	FALESARPLVRLINSHRRAIDLVSAGVLLVMGLLLLTNKLTILATGITQLVPGWPSPTL*
Ga0120157_100054315	3300011994	Permafrost	VRLVNSHRRAIDLASAAVLLVMGLLLLTNKLTILAAGLSQLVPAWPSPTL*
Ga0120152_10274601	3300012011	Permafrost	PLVRLINSHRRAIDLASAAVLLVMGLLLLTNKLTILAAGISQLVPSWPSPTL*
Ga0137399_100150123	3300012203	Vadose Zone Soil	ALESARPVVRFVNMHRRVIDLASAAVLVAMGLLLLTNKLAILSTGITQLVPSWPSPTI*
Ga0137399_102645361	3300012203	Vadose Zone Soil	PLVRQVNRHRRAIDLASAAVLLVMALLLLTNKLTLLSAGLSQLVPGWPSPTI*
Ga0137376_106916201	3300012208	Vadose Zone Soil	RFVNAHRRAIDLGSAAVLVAMGILLLTNNLTLLSAGLTQLIPSWPSPSL*
Ga0137378_113198782	3300012210	Vadose Zone Soil	ALAFALESARPLVRFVNAHRRAIDLGSAAVLVVMGVLLLTNNLTLLSAGLTQLVPNWPSPSL*
Ga0137387_110325521	3300012349	Vadose Zone Soil	LVRLVNSHRRAIDLASAAVLLVMGLLLLTNKLTFLAAGISQLVPSWPSPTI*
Ga0137366_104989022	3300012354	Vadose Zone Soil	NFVNAHRRAIDLASAAVLVVMGILLLTNNLALLSAGLTQLVPGWPSPSL*
Ga0137384_115417132	3300012357	Vadose Zone Soil	PLIRFVNDHRRAIDLASAAVLVVMGLLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0137385_108842091	3300012359	Vadose Zone Soil	SARPVVRVINSHRRAIDLLSAAVLLVMGVLLLTNKLAILSAGITQLVPSWPSPTL*
Ga0137360_106623371	3300012361	Vadose Zone Soil	LVRLVNSHRRAIDLASAAILVVMGLLLVMNKLTILSAGISQLVPGWPSPTL*
Ga0137361_109163592	3300012362	Vadose Zone Soil	FALESTRPLVRVINSHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL*
Ga0137390_103532423	3300012363	Vadose Zone Soil	VPFLAVALVLERARPLVLYVNSHRRVIDYASAAVLLVMGLLLLTNQLYILSTGITQLVPSWPSPTL*
Ga0137395_109121191	3300012917	Vadose Zone Soil	AFALESTRPLVRVINNHRRAIDLVSAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL
Ga0137396_102762671	3300012918	Vadose Zone Soil	TRPLMAFVNTHRRAIDLASAGVLLVMGVLLLSNKLTWLSAGLTQLVPNWPSPSL*
Ga0137419_111219391	3300012925	Vadose Zone Soil	VPFLVVALVVERARPLVLYVNNHRRVIDYASAAVLLVMGILLLTNQLYILSTGITQLVPSWPSPTL*
Ga0126369_124909551	3300012971	Tropical Forest Soil	IPFVVVALLLERATPLLRYVTNHRRVIDYASAGVLVVMGVLLLTNRLAILSTGITQLVPLWPSPTL*
Ga0134087_100122851	3300012977	Grasslands Soil	FIALAFALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSSGLTQLVPWWPSPSL*
Ga0120179_10395311	3300013763	Permafrost	INSHRRAIDLASAAVLLVMGLLLLTNKLTILAAGISQLVPSWPSPTL*
Ga0120125_11660442	3300014056	Permafrost	AFALESARPLVRLVNSHRRAIDLVSAAVLVVMGLLLLMNKLTILSAGISQLVPGWPSPTL
Ga0134075_103978001	3300014154	Grasslands Soil	FLVLALGLANTRPLLDYVNAHRRAIDIASAAVLVVMGVLLLTNRLTWLSAGLVQLIPSWPSPSL*
Ga0134078_103659971	3300014157	Grasslands Soil	FALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPW*
Ga0137412_104295062	3300015242	Vadose Zone Soil	ALESAKPLVRQVNRNRRAIDLASAAVLLVMGLLLLMNKLTVLSAGLAQLVPGWPSPTI*
Ga0137403_103458772	3300015264	Vadose Zone Soil	LAFALESARPFVRLINRHRRAIDLVSAVVLLVMGVLLLTNKLTVLSAGLTQLVPSWPSPTL*
Ga0066655_100584354	3300018431	Grasslands Soil	FALESARPLIRFVNAHRRAIDLGSAAVLVVMGVLLLTNNLTLLSAGLTQLVPNWPSPSL
Ga0066662_107503083	3300018468	Grasslands Soil	GVPFIALAFALEGARPLVRFVNSHRRAIDLASAAVLVVMGILLLTNNLTILSAGLTQLVPWWPSPSL
Ga0066662_124019482	3300018468	Grasslands Soil	GARPLIRFVNDHRRAIDLASAGVLVVMGLLLLTNRLTWLSAGLVQLIPSWPSPSL
Ga0066662_127132101	3300018468	Grasslands Soil	LEGARPLIRFVNEHRRAIDLASAGVLVAMGLLLLTNHLTWLSAGLVQLIPSWPSPSL
Ga0193723_11810142	3300019879	Soil	VRLVNSHRRAIDLASAAVLLVMGLLLLTNNLTILASGLTQLVPSWPSPSL
Ga0193751_10360964	3300019888	Soil	PFVRLINRHRRAIDLVSAAVLLVMGVLLLTNKLTVLSAGLTQLVPSWPSPTL
Ga0215015_101499021	3300021046	Soil	GLPFIALAFAFENARPLVRWVNSHRRVIDLASAAVLLVMGVLLLLDKLTILSAGLTQLVPSWPSPTL
Ga0210384_114515712	3300021432	Soil	VVNSHRRAIDLASAAVLLVMGVLLLTNKLTILSAGLSQLVPSWPSPTL
Ga0247677_10182781	3300024245	Soil	VNNHRRAIDLASAAILVVMGVLLLMNKLTVLSAGITQLVPGWPSPTL
Ga0207684_109698101	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FVNVHRRASDLASAGVLVAMGVLLLTNRLTWLSAGLTQLIPSWPSPTL
Ga0209880_10119811	3300026271	Soil	NHRRAIDLASAAILVVMGVLLLMNKLTILSAGISQIVPGWPSPTL
Ga0209881_10780791	3300026273	Soil	LGLPFVVLAFALESARPLVRLVNNHRRAIDLASAAILVVMGVLLLMNKLTILSAGISQLVPGWPSPTL
Ga0209473_11258472	3300026330	Soil	FVNNHRRAIDLTSAGVLLVMGVLLLTNRLTWLSAGLTQLIPSWPSPTF
Ga0209803_12749041	3300026332	Soil	RPLIRFVNEHRRAIDLASAGVLVAMGLLLLTNRLTWLSAGLVQLIPSWPSPSL
Ga0209804_11347711	3300026335	Soil	AFALESARPLVRLINNHRRAIDLVSAAVLLAMGLLLLTNKLAILSAGITQIVPSWPSPTL
Ga0209059_10596251	3300026527	Soil	AVALALEKVRPLVLYVNSHRRVIDYASAAVLLVMGLLLLTNQLYILSTGITQLVPSWPSPTL
Ga0209059_12314391	3300026527	Soil	LQGARPLVTFVNHHRRAIDLASAGVLAVMGVLLLTNRLTWLSAGLVQLIPSWPSPSI
Ga0209577_101692091	3300026552	Soil	RPLVRMVNSHRRAIDLVSAGVLVVMGLLLLTNRLAILSSGITQLVPNWPSPAL
Ga0209076_10078351	3300027643	Vadose Zone Soil	FIVLAFALQGARPLVTFVNHHRRAIDLGSAGVLAVMGVLLLTNRLTWLSAGLVQLIPSWPSPSI
Ga0209073_100231814	3300027765	Agricultural Soil	FAFEGTRPLIAFVNQHRRAIDIASAAVLMVMGVLLLTDRLTWLSAGLVQLVPSWPSPSL
Ga0209180_101681502	3300027846	Vadose Zone Soil	VLERSRPLVLYVNNHRRDINYASAAVLLVMGLLLLTNQLYILSTGITQLVPSWPSPTL
Ga0209590_100883124	3300027882	Vadose Zone Soil	ESARPLVRLVNSHRRAIDLASAAVLVVMGVLLLMNKLTVLSAGISQLVPGWPSPTL
Ga0209583_103419401	3300027910	Watersheds	FLVLAFAFERARPFVRVVNQHRRAIDLASAAVLLVMGFLLLTNRLTLLSAGLSQLVPSWPQPQL
Ga0307374_103067923	3300031670	Soil	IVRLINSHRRAIDLASAAVLLVMGLLLLTNKLTILAAGISQLVPSWPSPTL
Ga0307477_109200621	3300031753	Hardwood Forest Soil	SARPLVRLVNSHRRAIDLASAAILVVMGLLLLTNKLTILSAGLAQLVPGWPNPTL
Ga0307473_100617381	3300031820	Hardwood Forest Soil	GVPFLAVALVLERARPLVFYVNNHRRVIDYASAAVLLVMGILLLTNQLYILSTGITQLVPSWPSPTL
Ga0307479_104539313	3300031962	Hardwood Forest Soil	AFALGSTRPLLQFVNDHRRAIDLASAAVLVVMGLLLLTNRLTWLSAGLTQLIPSWPSPSF
Ga0307471_1007973281	3300032180	Hardwood Forest Soil	PLVRVINTHRRAIDLISAAVLLAMGLLLLTNKLAVLSAGITQLVPSWPSPTL
Ga0307471_1008389213	3300032180	Hardwood Forest Soil	GTRPLIAYVNEHRRAIDFASAGVLLVMGVLLLTDRLTWLSAGLVQLVPSWPSPSL
Ga0307471_1021172391	3300032180	Hardwood Forest Soil	AFALGFTRPLLQFVGDHRRAIDLASAAVLLVMGVLLLTNRLTWLSAGLTQLIPSWPSPTF
Ga0307471_1026870622	3300032180	Hardwood Forest Soil	LEKTRPLLRMLNSHRRAIDLVSAAVLVAMGLLLLTNKLAVLSAGITQLVPGWPSPTL
Ga0307472_1009728711	3300032205	Hardwood Forest Soil	VFYVNNHRRVIDYASAAVLLVMGILLLTNQLYILSTGITQLVPSWPSPTL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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