Metagenome / Metatranscriptome Family F096988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	132 residues
Representative Sequence	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLI
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.15 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (23.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.31% β-sheet: 0.00% Coil/Unstructured: 32.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
a.250.1.1: IpaD-like	d3nfta_	3nft	0.6312
f.70.1.1: Extracellular adhesion domain of SabA	d4o5ja_	4o5j	0.62557
e.18.1.0: automated matches	d5aa5c_	5aa5	0.61576
a.24.27.1: MW0975(SA0943)-like	d2ap3a1	2ap3	0.61332
f.24.1.1: Cytochrome c oxidase subunit I-like	d7coha_	7coh	0.60721

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02538	Hydantoinase_B	54.81
PF04392	ABC_sub_bind	4.81
PF01575	MaoC_dehydratas	0.96
PF07883	Cupin_2	0.96
PF02566	OsmC	0.96
PF05378	Hydant_A_N	0.96
PF13884	Peptidase_S74	0.96
PF01968	Hydantoinase_A	0.96
PF00571	CBS	0.96
PF12704	MacB_PCD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	109.62
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.81
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.92
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.96
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	6.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.23 %
Unclassified	root	N/A	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	37.50 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.73 %
Unclassified	root	N/A	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.92 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	6.73 %
Unclassified	root	N/A	6.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	6.73 %
Unclassified	root	N/A	6.73 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Unclassified	root	N/A	6.73 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	4.81 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Unclassified	root	N/A	6.73 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	4.81 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	1.92 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Unclassified	root	N/A	6.73 %
Paenibacillus pinihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	4.81 %
Bacillus cihuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cihuensis	1.92 %
unclassified Methanoculleus	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus	0.96 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	37.50 %
Unclassified	root	N/A	6.73 %
Paenibacillus pinihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	4.81 %
Bacillus cihuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cihuensis	1.92 %
Methanoculleus sp. MH98A	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. MH98A	0.96 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004058\|Ga0055498_10088104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	611	Open in IMG/M
3300004062\|Ga0055500_10064642	Not Available	759	Open in IMG/M
3300004479\|Ga0062595_100449715	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300004633\|Ga0066395_10551447	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005218\|Ga0068996_10055097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	790	Open in IMG/M
3300005293\|Ga0065715_11037505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cihuensis	535	Open in IMG/M
3300005436\|Ga0070713_101376239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	684	Open in IMG/M
3300005438\|Ga0070701_10179262	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005441\|Ga0070700_100413061	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005445\|Ga0070708_100288297	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300005445\|Ga0070708_100349474	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005445\|Ga0070708_101633773	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005459\|Ga0068867_100038614	All Organisms → cellular organisms → Bacteria → Proteobacteria	3476	Open in IMG/M
3300005467\|Ga0070706_100822336	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005471\|Ga0070698_100087203	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300005471\|Ga0070698_100549346	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300005471\|Ga0070698_100551088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1092	Open in IMG/M
3300005518\|Ga0070699_101252010	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005518\|Ga0070699_102054877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cihuensis	522	Open in IMG/M
3300005554\|Ga0066661_10802575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	551	Open in IMG/M
3300005555\|Ga0066692_10758282	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. MH98A	599	Open in IMG/M
3300005561\|Ga0066699_10915805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	611	Open in IMG/M
3300005764\|Ga0066903_107915460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	546	Open in IMG/M
3300006028\|Ga0070717_10760529	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300006049\|Ga0075417_10159720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1053	Open in IMG/M
3300006796\|Ga0066665_10191892	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300006800\|Ga0066660_11565664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	521	Open in IMG/M
3300006854\|Ga0075425_100801398	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300006854\|Ga0075425_101371170	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006903\|Ga0075426_10362319	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300006903\|Ga0075426_10362320	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300007076\|Ga0075435_100364181	Not Available	1240	Open in IMG/M
3300007076\|Ga0075435_100410547	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300007255\|Ga0099791_10268120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	811	Open in IMG/M
3300007265\|Ga0099794_10239057	Not Available	935	Open in IMG/M
3300009012\|Ga0066710_102066617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	840	Open in IMG/M
3300009038\|Ga0099829_10998726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	694	Open in IMG/M
3300009137\|Ga0066709_104376420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	515	Open in IMG/M
3300009147\|Ga0114129_11087814	Not Available	1002	Open in IMG/M
3300009147\|Ga0114129_12204074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	663	Open in IMG/M
3300009147\|Ga0114129_12778231	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300009177\|Ga0105248_10594510	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300009545\|Ga0105237_10331116	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300010360\|Ga0126372_10303210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1405	Open in IMG/M
3300010361\|Ga0126378_11423223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	785	Open in IMG/M
3300010362\|Ga0126377_12579076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	584	Open in IMG/M
3300012164\|Ga0137352_1033618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	988	Open in IMG/M
3300012202\|Ga0137363_10817714	Not Available	790	Open in IMG/M
3300012207\|Ga0137381_10013277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6362	Open in IMG/M
3300012927\|Ga0137416_11430940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	627	Open in IMG/M
3300012961\|Ga0164302_10522288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	843	Open in IMG/M
3300012971\|Ga0126369_10996956	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300014326\|Ga0157380_11152748	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300014881\|Ga0180094_1145713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	554	Open in IMG/M
3300015259\|Ga0180085_1240913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	533	Open in IMG/M
3300017656\|Ga0134112_10522769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	505	Open in IMG/M
3300017939\|Ga0187775_10107565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	945	Open in IMG/M
3300017966\|Ga0187776_10020630	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300018052\|Ga0184638_1054325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1459	Open in IMG/M
3300018060\|Ga0187765_11193224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	533	Open in IMG/M
3300018063\|Ga0184637_10110559	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300018064\|Ga0187773_10001643	All Organisms → cellular organisms → Bacteria	9070	Open in IMG/M
3300018468\|Ga0066662_11839417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	633	Open in IMG/M
3300019487\|Ga0187893_10043813	All Organisms → cellular organisms → Bacteria	4701	Open in IMG/M
3300019487\|Ga0187893_10096690	All Organisms → cellular organisms → Bacteria → Proteobacteria	2627	Open in IMG/M
3300019885\|Ga0193747_1052078	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300020010\|Ga0193749_1057951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	736	Open in IMG/M
3300020021\|Ga0193726_1128372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1123	Open in IMG/M
3300020070\|Ga0206356_10602818	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300020579\|Ga0210407_10189726	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300021170\|Ga0210400_11257612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	594	Open in IMG/M
3300021476\|Ga0187846_10265768	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300021560\|Ga0126371_13371179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	540	Open in IMG/M
3300025906\|Ga0207699_10313108	Not Available	1099	Open in IMG/M
3300025910\|Ga0207684_10412714	Not Available	1160	Open in IMG/M
3300025910\|Ga0207684_10530893	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300025922\|Ga0207646_10699697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	906	Open in IMG/M
3300025941\|Ga0207711_10441750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1211	Open in IMG/M
3300025965\|Ga0210090_1008953	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300026075\|Ga0207708_11358784	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026089\|Ga0207648_10041275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	4052	Open in IMG/M
3300026332\|Ga0209803_1188382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	772	Open in IMG/M
3300026377\|Ga0257171_1033140	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300026497\|Ga0257164_1011644	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300026508\|Ga0257161_1042607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	909	Open in IMG/M
3300026514\|Ga0257168_1021211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1343	Open in IMG/M
3300026524\|Ga0209690_1098538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1201	Open in IMG/M
3300026532\|Ga0209160_1175711	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300027695\|Ga0209966_1063860	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300027765\|Ga0209073_10069554	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300028536\|Ga0137415_10831561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	733	Open in IMG/M
3300028792\|Ga0307504_10368744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	558	Open in IMG/M
3300028803\|Ga0307281_10179553	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031545\|Ga0318541_10195680	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031720\|Ga0307469_12021637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	559	Open in IMG/M
3300031820\|Ga0307473_10061393	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300031820\|Ga0307473_10546048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	790	Open in IMG/M
3300032075\|Ga0310890_11135784	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032076\|Ga0306924_11968164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	603	Open in IMG/M
3300032205\|Ga0307472_102466145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus pinihumi	528	Open in IMG/M
3300033500\|Ga0326730_1024301	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300034164\|Ga0364940_0018533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1745	Open in IMG/M
3300034164\|Ga0364940_0230241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	545	Open in IMG/M
3300034692\|Ga0373917_0070910	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.73%
Host-Associated	Host-Associated	17.31%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.08%
Plants	Host-Associated → Plants	17.31%
Aquatic	Environmental → Aquatic	8.65%
Bioremediation	Engineered → Bioremediation	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.46%
Sediment	Environmental → Aquatic → Sediment	4.81%
Marine	Environmental → Aquatic → Marine	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Cave	Environmental → Terrestrial → Cave	2.88%
Floodplain	Environmental → Terrestrial → Floodplain	1.92%
Peat	Environmental → Terrestrial → Peat	0.96%
Metal	Engineered → Bioremediation → Metal	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.23%
Loam	Environmental → Terrestrial → Soil → Loam	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055498_100881042	3300004058	Natural And Restored Wetlands	MHAAALTLGLSSLALAAFPLVRPFFPFDPKTPAETLAGASPAVTSASWLIAHYLALIGFVLLLCVLPALYARLTDAGVESPARRATLLSGVGVALILPTLGVELYALPAIGRVYLD
Ga0055500_100646421	3300004062	Natural And Restored Wetlands	MHAAALTLGLSSLALAAFPLVRPFFPFDPRAPAETLAGASRAVASASWLIAHYLALIGFVLLLCVLPALYARLAGTGVESPARRATLLSGVGVALILPTLGVELYALP
Ga0062595_1004497152	3300004479	Soil	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCSLGVALILPTLGVELYALPAIGRIYLAGNV
Ga0066395_105514472	3300004633	Tropical Forest Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTRPMETMDAAAPAVASIPWRLSHYLALIGFVLLICVLPALHARLAAAGVETRSRRATLLCTLGAVLVLPTLGVELYAFPAISRVYLAGNVSIAPAMSIMYIGGATL
Ga0068996_100550972	3300005218	Natural And Restored Wetlands	MHAAALTLGLSSLALAAFPLVRPFFPFDPKTPAETLAGASPAVTSASWLIAHYLALIGFVLLLCVLPALYARLTDAGVESPARRATLLSGVGVALILPTLGVELYALPAIGRVYLDGNHSVA
Ga0065715_110375051	3300005293	Miscanthus Rhizosphere	GSGRMSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLVLLAIGAIML
Ga0070713_1013762392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCSLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVLAVA
Ga0070701_101792621	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLVLLAIGAIVLATA
Ga0070700_1004130611	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSCVSAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYA
Ga0070708_1002882974	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPTGGPRR*
Ga0070708_1003494742	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAMAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGWIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVLA
Ga0070708_1016337732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHGAALTLGLSSLALAVFPLVRPFFPFDPRRPAETLAGASRAVTSAPWLIAHYIALIGFVLLLCVLPALFARAAAGVESRARRATLLSGVGVALILPTLGVELYVLPAIGRLYLDGQLGVAELVGLIYRGGAVVIML
Ga0068867_1000386141	3300005459	Miscanthus Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSI
Ga0070706_1008223362	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTYPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYA
Ga0070698_1000872034	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTYPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVL
Ga0070698_1005493462	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAMAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGWIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVL
Ga0070698_1005510883	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGARPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGATLVMVLG
Ga0070699_1012520102	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAMAPAVISGLWRFAHYLVLIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGWIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVL
Ga0070699_1020548771	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLVLL
Ga0066661_108025751	3300005554	Soil	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGATLVMVL
Ga0066692_107582821	3300005555	Soil	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPT
Ga0066699_109158051	3300005561	Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGARPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGAT
Ga0066903_1079154601	3300005764	Tropical Forest Soil	VNGTALTLGLSSLSLALFPLVRPYFPFDPTNPAETLAGAAPAVTSARWLIAHYLALVGFVLLVCALPALGAVSHAGCRIWVIGVGVMLILPTLGIELYTLPAIGRLYLDGNTSVALLLRPIYLRGAAPVM
Ga0070717_107605291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCSLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVLA
Ga0075417_101597203	3300006049	Populus Rhizosphere	MHGAALTLGLSSLALAVFPLVRPFFPFDPTTPAETLAGASRAVTSALWLIAHYLALVGFVLLLCALPALYTRLASTGIESRARWAMLLSGVGVALILPTLGVELYALPAIGRLFLDGNPSVAPAVGLIYLG
Ga0066665_101918922	3300006796	Soil	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGVQSSARRATLLSGTGIALILPTLGVELYVLPGIDRLFLEGNAAVAPLVGLIYLGGATLVMVLGPAAPGRRR
Ga0066660_115656641	3300006800	Soil	VTGAAVNLGLSSLALAAFPVVRPFFPFDPRTPAETLTGASRAVTSPRWMVAHYLALIGFVLLLCVLPALHARLSAAGARPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGATLVMVLGLVLL
Ga0075425_1008013981	3300006854	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALTGFVLLLCALPSLRARLAAAGVEARARLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAP
Ga0075425_1013711702	3300006854	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRVATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAP
Ga0075426_103623192	3300006903	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALTGFVLLLCALPSLRARLAAAGVEARARLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGA
Ga0075426_103623202	3300006903	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRVATLLCGLGVVLILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGA
Ga0075435_1003641811	3300007076	Populus Rhizosphere	MRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPA
Ga0075435_1004105472	3300007076	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALTGFVLLLCALPSLRARLAAAGVEARARLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVLA
Ga0099791_102681202	3300007255	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTQPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATL
Ga0099794_102390571	3300007265	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTQPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPA
Ga0066710_1020666172	3300009012	Grasslands Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPTGGPRR
Ga0099829_109987261	3300009038	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLLAIGAIVLAVA
Ga0066709_1043764201	3300009137	Grasslands Soil	VTGAAVNLGLSSLALAAFPVVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGLIYLGGATFVMLLGLL
Ga0114129_110878141	3300009147	Populus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALTGFVLLLCALPSLRARLAAAGVEARARLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGAT
Ga0114129_122040742	3300009147	Populus Rhizosphere	VRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIG
Ga0114129_127782312	3300009147	Populus Rhizosphere	MRGAALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALVGFVLLLCVLPALHARLSAGSVEARSRRAMLLCSLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGAT
Ga0105248_105945102	3300009177	Switchgrass Rhizosphere	MRGAALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVS
Ga0105237_103311161	3300009545	Corn Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYI
Ga0126372_103032102	3300010360	Tropical Forest Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTRPMETMDAAAPAVASIPWRLSHYLALIGFVLLICVLPALHARLAAAGVETRSRRATLLCTLGAVLVLPTLGVELYAFPAISRVYLAGNVSIAPAMSIMYIGGATLMMLLGLLLLAIGAIVLATA
Ga0126378_114232232	3300010361	Tropical Forest Soil	MTGAAVTLGLSSLALAAFPLVRPFFPFDPTTPAETLAGASGAVTSPRWLVAHYLALIGFVLLLCVLPALDSRLAPTGAQPRARLGVVLSGVGVALILPTLGVELYALPAIGLLFLDNTGVAPLVAAIYLG
Ga0126377_125790761	3300010362	Tropical Forest Soil	MTGAAVTLGLSSLALAAFPLVRPFFPFDPTTPAETLARASRAVTSPQWLVAHYLALIGFVLLLCVLPALHTRLAPAGAPPSARLATLLSGVGVALILPTLGVELYVLPAIGRLFLDGNAAVAPLVGSIYLGGATLVMVLG
Ga0137352_10336182	3300012164	Soil	MRGAALTLGLSSVALAAFPLVRPFFPFDPTTPAETLAGASRAVTSARWLIAHYLALAGFVLLLCVLPTLYMRLAAAGVEARARRATLLSGVGVALILPTLGVELYALPAIGRLYLDGQLAVAELVGLI
Ga0137363_108177141	3300012202	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYAL
Ga0137381_100132775	3300012207	Vadose Zone Soil	MRWPALTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSAPWLIAHYLALVGFVLLLCVLPELSSHLTAAGVASRARSSMLLSGIGVTLILPTLGVELYALPAIGRLYLEGNPSVAARVGLIYGGAAVLVMLLGLLLLAIGASRSRRPPRGAARSRGGRP*
Ga0137416_114309401	3300012927	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYI
Ga0164302_105222882	3300012961	Soil	MRGAALTLAVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALVGFVLLLCGLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPALGRIYLAGNVS
Ga0126369_109969561	3300012971	Tropical Forest Soil	VNGTALTLGLSSLSLALFPLVRPYFPFDPTNPAETLAGAAPAVTSARWLIAHYLALVGFVLLVCALPALGAVSHAGCRIWVIGVGVMLILPTLGIELYTLPAIGRLYLDGNTSVA
Ga0157380_111527482	3300014326	Switchgrass Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYIGGATLVML
Ga0180094_11457131	3300014881	Soil	MRGAALTLGLSSVALAAFPLVRPFFPFDPTTPAETLAGASRAVTSARWLIAHYLALAGFVLLLCVLPTLYMRLAAAGVEARARRATLLSGVGVALILPTLGVELYALPAIGRLYLDGQLAVAELVGLIYRGA
Ga0180085_12409131	3300015259	Soil	MRGAALTLGLSSVALAVFPLIRPFFPFDPTTPAETLAGASRAVTSARWLIAHYLALAGFVLLLCVLPAVYTWLAAAGVETRARRATLLSGVGVALILPTLGVELYALPAIGRLYLDGQLAVAELVGLI
Ga0134112_105227691	3300017656	Grasslands Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPIARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGATLVM
Ga0187775_101075652	3300017939	Tropical Peatland	GTAVTLGLASLALAWFPLVRPFFPFDPTTPAETLTGASLAVTSPRWLIAHYLALIGFVLLLCVLPPLHARLAAAGTGSGARRAAVLSGAGIALILPTLGVELYVLPESAGSSWTATRPWRHSWG
Ga0187776_100206301	3300017966	Tropical Peatland	MTGTAVTLGLASLALAWFPLVRPFFPFDPTTPAETLTGASLAVTSPRWLIAHYLALIGFVLLLCVLPPLHARLAAAGTGSGARRAAVLSGAGIALILPTLGVELY
Ga0184638_10543252	3300018052	Groundwater Sediment	MRGAALTLGLSSVALAVFPLIRPFFPFDPTTPAETLAGASRAVTSARWLIAHYLALAGFVLLLGVLPALYTRLAAAGVEARARRATLLSGVGVALVLPTLGVELYALPAIGRLYLGG
Ga0187765_111932241	3300018060	Tropical Peatland	MRGAAVTLGLSSFALAMFPQFRPFFFFDPTRPMETMDAAAPAVASGPWLFAHYLALIGFVLLLGVLPALHARLATAGVEARSRRATRLCTLGVALILPTLGVELYALPAIGRIYLAGTVSIAPA
Ga0184637_101105591	3300018063	Groundwater Sediment	MHGAALTLGLSSLALAAFPLVRPFFPFDPRAPAETLAGASRAVTSAPWLIAHYIALIGFVLLLCVLPALHARLAVPGVESRARWATLLSGVGVALILPTLGVELYALPAIGRLYLDGQLAVAELVGLIYRGAAV
Ga0187773_100016435	3300018064	Tropical Peatland	MTGTAVTLGLASLALAWFPLVRPFFPFDPTTPAETLTGASLAVTSPRWLIAHYLALIGFVLLLCVLPPLHARLAAAGTGSGARRAAVLSGAGIALILPTLGVELYVLPESAGSSWTATRPWRHSWG
Ga0066662_118394171	3300018468	Grasslands Soil	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNTAVALLV
Ga0187893_100438134	3300019487	Microbial Mat On Rocks	MRGAALTLGLSSVALAAFPLVRPFFPFDPTTPAETLAGASRAVTSAPWLIAHYLALAGFVLLLCVLPALYTRLTAAGVEARARRATLLSGVGVALILPTLGVELYALPAIGRLY
Ga0187893_100966903	3300019487	Microbial Mat On Rocks	MRGAALTLGLSSVALAAFPLVRPFFPFDPTTPAETLAGASRAVTSAPWLIAHYLALAGFVLLLCVLPALYTRLAAAGVEARARRATLLSGVGVALILPTLGVELYALPAIGRLY
Ga0193747_10520782	3300019885	Soil	MRGAALTLGLSSLAFALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARARLATLLCGLGVALILPTLGV
Ga0193749_10579512	3300020010	Soil	MRGAALTLGLSSLAFALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARARLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGAATLVMLLGLLLLA
Ga0193726_11283722	3300020021	Soil	MRGAAITLGLSSLAFALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARARLATLLCSLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLV
Ga0206356_106028182	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVFIAPPVSLIYIGGAT
Ga0210407_101897264	3300020579	Soil	MHGAAVTLGLSSLALATFPLVRPFFPFDPTHPVETLAGASRAVTSVPWLIAHYLALLGFVLLLSVLPALHTRLARAGVGTRAGWAMLLSGVGVALILPTLGVELYALPAIGRL
Ga0210400_112576121	3300021170	Soil	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLA
Ga0187846_102657682	3300021476	Biofilm	MRGAAVTLGLSSFALAMFPQFRPFFFFDPTRPMETMDAASPAVASGPWLFAHYLALIGFVLLLGVLPTLHARLAAAGVEARSRRATRLCTLGVALILPTLGVELYAMPAIGRIYLAGTVSIAPAVSM
Ga0126371_133711791	3300021560	Tropical Forest Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTRPMETMDAAAPAVASIPWRLSHYLALIGFVLLICVLPALHARLAAAGVETRSRRATLLCTLGAVLVLPTLGVELYAFPAISRVYLAGNVSIAPAMSIMYIGGATLMMLLG
Ga0207699_103131082	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYA
Ga0207684_104127141	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYA
Ga0207684_105308932	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTWAAVTSDSRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPTGGPRR
Ga0207646_106996972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYL
Ga0207711_104417501	3300025941	Switchgrass Rhizosphere	MRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGSVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLG
Ga0210090_10089532	3300025965	Natural And Restored Wetlands	MHAAALTLGLSSLALAAFPLVRPFFPFDPRAPAETLAGASRAVASASWLIAHYLALIGFVLLLCVLPALYARLTDAGVESPARRATLLSGVGVALILPTLGVELYALPAIGRVYLDGNHSVAALVGLIYRGGAVLVMLL
Ga0207708_113587841	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVS
Ga0207648_100412751	3300026089	Miscanthus Rhizosphere	MSCASAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPAVSL
Ga0209803_11883821	3300026332	Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPSTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPTGGPRR
Ga0257171_10331402	3300026377	Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFGLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNA
Ga0257164_10116442	3300026497	Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGN
Ga0257161_10426072	3300026508	Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEAPARLATLLCGLGVALILPTLGVELYALPAIG
Ga0257168_10212112	3300026514	Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTQPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIDT
Ga0209690_10985381	3300026524	Soil	SRVSPLAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGVALILPTLGVELYVLAGIGRLFLNGNAAVAPLVGRDHLRGRPRPLVPAPPTGGPRR
Ga0209160_11757111	3300026532	Soil	VTGAAVPLGLSSLALAAFPVVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGVQSSARRATLLSGTGIALILPTLGVELYVLPGIDRLFLEGNAAVAPLVGLIYLGGATLVMVLGPAA
Ga0209966_10638601	3300027695	Arabidopsis Thaliana Rhizosphere	MSCVSAIAPAVTPAAETGERVAMRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSI
Ga0209073_100695542	3300027765	Agricultural Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAAAVASGPWRFAHYLALTGFVLLLGVLPALHARLAVAGVEARSRRATLLCTLGVALILPTLGLELYAMPAIGRIFLAGNVSIAPAVSLMYIGGALLIMLLGVLL
Ga0137415_108315612	3300028536	Vadose Zone Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVTSGLWRFAHYLALIGFVLLLCVLPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLI
Ga0307504_103687441	3300028792	Soil	MHGAAVTLGLSSLALAIFPLVRPFFPFDPRHPLETLNVAGRPITSAAWLIAHYLALLGFVLLLCALPALYERLATTGVEPRARWATLLSGVGVALILPTLGVEIYVLPAIGRLFLDGNASVAPAVGLIYLGGATVVMLLGLLLLAFGAILLASA
Ga0307281_101795531	3300028803	Soil	MHAVALTLGLSSLALAVFPLIRPFFPFDPRTPAETLAGASRAVTSARWLIAHYLALIGFVLLLCVLPALYSRLAAAGVESRARRAMLLSGVGVALILPTLGVELYTLPAIGRLYLDGNPAVAPLVGLIYRGAAVLVMLLGLLLLAIGAVFFAR
Ga0318541_101956801	3300031545	Soil	MTGVAVTLGLSSLALAAFPLARPFFPFDPTTPTETLAGASRAVTSPQWLVAHYLALIGFVLLLCVLPALHNRLAPAGTQCSVGLGVLLSGAGVALILPTLGVELYALPAIARLFLDNPAVASLVGSIYLGGATLVMILG
Ga0307469_120216372	3300031720	Hardwood Forest Soil	MRGAAVTLGLSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGRIYLAGNVSIAPAVSLIYIGGATLVMLLGLLLL
Ga0307473_100613931	3300031820	Hardwood Forest Soil	MHGAALTLGLSSLALAVFPLVRPFFPFDPRRPAETLAGASRAVTSAPWLIAHYIALIGFVLLLCVLPALFARLAAAGVESRARRATLLSGVGVALILPTLGVELYVLPAIGRLYLDGQ
Ga0307473_105460482	3300031820	Hardwood Forest Soil	MRGAALTLGLSSLALALFPQFRPFFFFDPTHPMETMDAMAPAVISGLWRFAHYLALIGFVLLLCALPALHARLAAAGVEARSRLATLLCGLGVALILPTLGVELYALPAIGWIYLAGNVSIAPA
Ga0310890_111357842	3300032075	Soil	MRGPALTLGVSSLALALFPQFRPFFFFDPTHPMETMDAAAPAVASPAWRLAHYLALIGFVLLLCVLPALHARLSAGGVEARSRRAMLLCSLGVALILPTLGVELYAMPAIGRIYLAGNVSIAPA
Ga0306924_119681641	3300032076	Soil	MTGVAVTLGLSSLALAAFPLARPFFPFDPTTPTETLAGASRAVTSPQWLVAHYLALIGFVLLLCVLPALHNRLAPAGTQCSVGLGVLLSGAGVALILPTLGVELYALPAIARLFLDNPAVASLVGSIYL
Ga0307472_1024661451	3300032205	Hardwood Forest Soil	MTWAAVTLGLSSLALAAFPLVRPFFPFDPRTPAETLAGASRAVTSPRWLVAHYLALIGFVLLLCVLPALHARLSAAGAQPSARRATLLSGTGIALILPTLGVELYVLPGIGRLFLEGNAAVAPLVGSIYLGGATL
Ga0326730_10243011	3300033500	Peat Soil	MHGAALTLGLSSLALALFPLVRPFFPFDPRTPTETLAGASRAVTSTSWLIAHYLALVGFVLLLCALPALYTRLASTGIESRARWAMLLSGVGVALILPTLGVEL
Ga0364940_0018533_2_448	3300034164	Sediment	MRGAALTLGLSSVALAVFPLIRPFFPFDPTTPAETLAGASRAVTSARWLIAHYLALAGFVLLLCALPALYMRLAAAGVEARARRATLLSGVGVALVLPTLGVELYALPAIGRLYLGGQLAVAELVGLIYRGAAVLVMLLGLLLLALGAV
Ga0364940_0230241_127_543	3300034164	Sediment	MHGAALTLGLSSLALAAFPLVRPFFPFDPRAPAETLAGASRAVTSAPWLIAHYIALIGFVLLLCVLPALHARLAVPGVESRARWATLLSGVGVALILPTLGVELYALPAIGRLYLDGQLAVAELVGLIYRGAAVLVMLL
Ga0373917_0070910_194_562	3300034692	Sediment Slurry	MHAAALTLGLSSLTLAAFPLVRPFFPFDPRTPAETLAGASRAVASASWLIAHYLALIGFVLLLCVLPALYARLAGAGAESPARRATLLSGVGVALILPTLGVELYALPAIGRAYLEGDHSVAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences