Metagenome / Metatranscriptome Family F097011

Basic Information
Family ID	F097011
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	118 residues
Representative Sequence	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTA
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.22 %
% of genes near scaffold ends (potentially truncated)	43.27 %
% of genes from short scaffolds (< 2000 bps)	35.58 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (56.731 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (67.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.077 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 5.41% β-sheet: 31.76% Coil/Unstructured: 62.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13492	GAF_3	11.54
PF08448	PAS_4	8.65
PF00072	Response_reg	2.88
PF03544	TonB_C	2.88
PF00486	Trans_reg_C	1.92
PF03916	NrfD	0.96
PF00117	GATase	0.96
PF02472	ExbD	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.88
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
All Organisms	root	All Organisms	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
cellular organisms	root	All Organisms → cellular organisms	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	12.50 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.88 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1015320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1348	Open in IMG/M
3300002560\|JGI25383J37093_10002770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	5220	Open in IMG/M
3300002561\|JGI25384J37096_10066818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1328	Open in IMG/M
3300002908\|JGI25382J43887_10187228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1010	Open in IMG/M
3300002914\|JGI25617J43924_10237039	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	613	Open in IMG/M
3300005166\|Ga0066674_10106358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1305	Open in IMG/M
3300005166\|Ga0066674_10115805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1251	Open in IMG/M
3300005177\|Ga0066690_10251789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1185	Open in IMG/M
3300005181\|Ga0066678_10691771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300005186\|Ga0066676_10630525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	727	Open in IMG/M
3300005406\|Ga0070703_10048020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1354	Open in IMG/M
3300005444\|Ga0070694_100229640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1395	Open in IMG/M
3300005445\|Ga0070708_100924963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300005454\|Ga0066687_10208614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1070	Open in IMG/M
3300005545\|Ga0070695_100057492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2513	Open in IMG/M
3300005558\|Ga0066698_10216139	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1315	Open in IMG/M
3300005569\|Ga0066705_10162802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1377	Open in IMG/M
3300005574\|Ga0066694_10226589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	886	Open in IMG/M
3300006794\|Ga0066658_10297136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	864	Open in IMG/M
3300006797\|Ga0066659_10981432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300006954\|Ga0079219_10628025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	795	Open in IMG/M
3300010329\|Ga0134111_10304761	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	664	Open in IMG/M
3300010335\|Ga0134063_10147921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1088	Open in IMG/M
3300011271\|Ga0137393_10005470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8394	Open in IMG/M
3300012096\|Ga0137389_10231402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1548	Open in IMG/M
3300012200\|Ga0137382_10825998	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	667	Open in IMG/M
3300012353\|Ga0137367_10241953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1299	Open in IMG/M
3300012359\|Ga0137385_10213829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1680	Open in IMG/M
3300012925\|Ga0137419_10511278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	955	Open in IMG/M
3300012927\|Ga0137416_10666205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	912	Open in IMG/M
3300012977\|Ga0134087_10584986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300015357\|Ga0134072_10117598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	838	Open in IMG/M
3300015357\|Ga0134072_10304014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	596	Open in IMG/M
3300017654\|Ga0134069_1239198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300017659\|Ga0134083_10325639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300018433\|Ga0066667_10002130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7794	Open in IMG/M
3300018468\|Ga0066662_10367578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1247	Open in IMG/M
3300025905\|Ga0207685_10173399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	994	Open in IMG/M
3300026277\|Ga0209350_1007792	Not Available	3585	Open in IMG/M
3300026301\|Ga0209238_1019157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2623	Open in IMG/M
3300026301\|Ga0209238_1108098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300026304\|Ga0209240_1202158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300026342\|Ga0209057_1101702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1151	Open in IMG/M
3300026536\|Ga0209058_1015207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5258	Open in IMG/M
3300027765\|Ga0209073_10015222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2175	Open in IMG/M
3300032180\|Ga0307471_100091887	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2717	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.42%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Sand	Environmental → Terrestrial → Soil → Sand	0.96%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	37.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10153201	3300002557	Grasslands Soil	MDRRTFVLLTGATSGALLRPPVRLSGSPTGAHRRSGERAVGRLRFELDDRRRWSLWYYGDGAPVPLVRDGEVVTWLADRSLTLADLXDSTVGSRRPPGGDA
JGI25383J37093_100027707	3300002560	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPG
JGI25384J37096_100668183	3300002561	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRPTHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVV
JGI25382J43887_101872283	3300002908	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGADRRSGAPAIGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGG
JGI25617J43924_102370392	3300002914	Grasslands Soil	MDRRTFVLLAGAAATSLRPAGASARGGARALGRLRFELDERRRWSLWYYGEGAPVPLVRDAEIVAWVGERALTLVELEDSSVGSRRPPGGDAVVVRGRTNGVWVEAEFLAAGGL
Ga0066674_101063583	3300005166	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDDHHRWSLWYYGEGSAVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPPGGDAVVVRGRAAG
Ga0066674_101158053	3300005166	Soil	MDRRTFVLLTGAGSAALIRPPDRLSLGPPRADGRTGARADGRLRFELDDHHRWSLWYYGDGSPVPLVRDAEIVAWVGDRPLTLADLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAE
Ga0066672_109612462	3300005167	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPAPSGVAGTGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLGDRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAG
Ga0066677_106665132	3300005171	Soil	MDRRTFVLLTGTVSSGLIRAPQARRAAAIGRLRFELDDRRRWSLWYYGDGAPVPLIRDAEVVTWLADRPLGLADLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAEAPQAVV
Ga0066680_100854703	3300005174	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRAIGLADLEDSTVGNRRPPGGDAVVVRG
Ga0066679_101231411	3300005176	Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADIVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTA
Ga0066690_102517891	3300005177	Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTA
Ga0066688_109912022	3300005178	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPAPSGVAGTGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLGDRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTA
Ga0066685_106611841	3300005180	Soil	MDRRTFVLLTGGMSSGLIRPPSTALDRPRPPGVAGTGRLRFELDDHHHWSLWYYGDGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEL
Ga0066685_107489092	3300005180	Soil	MDRRTFVLLTGASSAALIRPPERQSLGPPGADGRTGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEL
Ga0066678_106917711	3300005181	Soil	MDRRTFVLLTGGVSSGLIRPPSTALHRPPPRGVAGTGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQSLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTV
Ga0066676_100037181	3300005186	Soil	MPTNIVTMDRRTFVLLTGGVSGGLVARPALADARQRPRPHRRDVPGRLRFELDERRRWSLWYYGDGSPVPLVRDAEVLTWVGDRALTLAELEDSAVGSRRPPGGDAV
Ga0066676_106305252	3300005186	Soil	MDRRTFVLLTGGVSSGLIRPPSTALHHPPPRGVAGAGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTV
Ga0070703_100480203	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGATSGALIRPPVRLSDSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGEGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRA
Ga0070694_1002296403	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGGVSSGLIRPPSTALHRPPPVGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRA
Ga0070708_1009249632	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGATSGALIRPPVRLSDSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGEGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGAGTPQASVTVTVFPDRYL
Ga0066689_107506301	3300005447	Soil	MDRRTFVLLTGGVSSGLIRPPSTALHRPPPRGVAGTGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQSLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLT
Ga0066687_102086141	3300005454	Soil	MDRRTFVLLTGGVSSGLIAPPSTALHRPRPSGVAGTGRLRFELDERRRWSLWYYGDGAPVPLIRDAEMVTWLADRPLGLADLEDSTVGSRRPPGGDAVVVRGRAAG
Ga0070698_1001118101	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGGVSSGLIRPPSTALHRPPPVGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPLTLAELEDSTVGNRRPPGGD
Ga0070695_1000574923	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGATSGALIRPPVRLSHSPTRAGWRSGGPAVGRLRFELDDHRRWSLWYYGEGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRA
Ga0066704_108998782	3300005557	Soil	MDRRTFVLLTGATSGALIRPPARPIRPIGGSGGSTVGRLKFELDEHRRWSVWYYGDGPPVPLIKAAVIGAWVADQVVTLADLEDSTVGNRRPPGGESVVVRGRAAGVFLEAEFLSSSE
Ga0066698_101929311	3300005558	Soil	MDRRTFVLLTGGMSSGLIRPPSTALDRPRPPGVAGTGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEL
Ga0066698_102161391	3300005558	Soil	MFVLLTGATSGALIRPPVRLSHSPTGADRRSGGPAVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVVWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRVAGVWVEAELLTAGGASTPQASVTVTV
Ga0066703_109051221	3300005568	Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADIVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAG
Ga0066705_101628021	3300005569	Soil	VLLTGAGSAALIRPPDRLSDGPPRTDGRKGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLGDRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAG
Ga0066694_102265892	3300005574	Soil	VLLTGAGSAALIRPPDRLSDRPPRTDGRKGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLADLEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAETPQAAVTVTVFPDRFLPSVK
Ga0066708_110575132	3300005576	Soil	MDRRTFVLLTGGVSSRLIVPPSTALHRPPPSGVAGVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAE
Ga0066656_107466882	3300006034	Soil	MSTGLIRPPSTALDRPRPPGVAGTGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVTWVADRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWV
Ga0066652_1000063909	3300006046	Soil	MDRRTFVLLTGASSAALIRPPERQSLGPPGADGRTGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVG
Ga0066658_102971361	3300006794	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDEHRRWSLWYYGDAAPVPLIRDAEVVTWLADRAIGLTDLEDSTVGSRRPPGGDAIVVRGRAAGVWVEAEFLTAGAAEAPQAVVTVTVFPDRVLPS
Ga0066659_104924781	3300006797	Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVE
Ga0066659_109814322	3300006797	Soil	MFVLLTGATSGALIRPPVRLSHSPTGADRRSGGPAVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVVWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRS
Ga0066659_114053652	3300006797	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDEHRRWSLWYYGDAAPVPLIRDAEVVTWLADRAIGLTDLEDSTVGSRRPPGGDAIVVRGRAAGVWVE
Ga0066660_116316781	3300006800	Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADIVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAETPQAAVTVTVF
Ga0079219_106280251	3300006954	Agricultural Soil	MDRRTFVLLTGATSGALIRPPVRLSDSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGEGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGAGTPQASVTVTVFPDRYLPTVR
Ga0099827_103288091	3300009090	Vadose Zone Soil	MDRRTFVLLTGAGSAALFRPPVRLSATPSRADGRRGGQPVGRLHFDLDEQRRWSLWYQGDGPAVPLIRDAALGAWIADQFVTLGELEDTTVGNRRPPGGEALV
Ga0099827_116759651	3300009090	Vadose Zone Soil	MDRRTFVLLTGATSGALIRPPVRPTHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVF
Ga0066709_1037789162	3300009137	Grasslands Soil	MDRRTFVLLTGASSAALIRPPDRLSDSPPWAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTA
Ga0105071_10879992	3300009808	Groundwater Sand	MDRRTFVLLTGAASATLIRPARAVGPSAGRAAGRLRFELDDRRRWSLWYYGDGRPVALIQDAIIGAWVGDQLVTLAELEDSTVGTRRPPGGEAVAVRGRTAGVYMEAEFLTDGNADAPQAAV
Ga0134109_100931273	3300010320	Grasslands Soil	MFVLLTGATSGALIRPPVRLSHSPTGADRRSGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAQLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGADTPQASVT
Ga0134086_101194523	3300010323	Grasslands Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVVWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRA
Ga0134065_102626771	3300010326	Grasslands Soil	MPTNIVTMDRRTFVLLTGGVSGGLVARPALADARQRPRPHRRDVPGRLRFELDERRRWSLWYYGDGSPVPLVRDAEVLTWVGDRALTLAELEDSAVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAGGAAAPQAAVT
Ga0134111_103047611	3300010329	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQ
Ga0134080_105014342	3300010333	Grasslands Soil	MDRRTFVLLTGASSAALIRPPERQSLGPPGADGRTGGQPVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVTWVGDGPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGASTPQASVTVTVFP
Ga0134080_105820451	3300010333	Grasslands Soil	MDRRTFVLLTGAGSAALIRPPDRLSLGPPRADGGTGARADGRLRFELDDHHRWSLWYYGDGSPVPLVRDAEIVAWVGDRPLTLADLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGASTPQASVTVTI
Ga0134063_101479211	3300010335	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTVR
Ga0137393_100054701	3300011271	Vadose Zone Soil	MDRRTFVLLAGAAATSLRPAGASARGGARALGRLRFELDERRRWSLWYYGEGAPVPLVRDAEIVAWVGERALTLVELEDSSVGSRRPPGGDAVVVRGRANGVWVEAEFLAA
Ga0137389_102314021	3300012096	Vadose Zone Soil	MDRRTFVLLAGAAATSVRPPTGASTRGGVRALGRLRFELDERRRWSLWYYGEGAPVPLVRDAEIVAWVGERALTLVELED
Ga0137383_107976071	3300012199	Vadose Zone Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPPGGDAVVVRGRAA
Ga0137383_113471581	3300012199	Vadose Zone Soil	MDRRTFVLLTGATSGALIRSPARLSHSPTGTDRRSGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDHPLTLAELEDSTVGNRRPPGGDAVVVRGRA
Ga0137382_108259981	3300012200	Vadose Zone Soil	MDRRTFVLLTGGVSSRLIVPPSTALHRPPPSGVAGIGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAETPQAAVTVTVFPDRFLPSVKG
Ga0137376_103407451	3300012208	Vadose Zone Soil	MPTNIVTMDRRTFVLLTGGVSGGLAARPALADARQRPRPHRRDVPGRLRFELDERRRWSLWYYGDGSPVPLVRDAEVLTWVGDRALTLAELEDSAVGSRRPPGGDAVVVRGRAAGVWVEAEFL
Ga0137370_100232004	3300012285	Vadose Zone Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGAST
Ga0137370_105509542	3300012285	Vadose Zone Soil	MDRRTFVLLTGASSAALIRPPDRQSLGPPGADGRTAGQAVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVGIRRPPGGDAVVVRGRAAGVWVEAELLTA
Ga0137367_102419531	3300012353	Vadose Zone Soil	MDRRTFVLLTGATSGALIRPPVRLTDGPARADGRSGGPAVGRLRFELDDHHRWSLWYYGDASPVPLVRGAEIVAWVGDRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTA
Ga0137385_102138293	3300012359	Vadose Zone Soil	MDRRTFVLLTGTLSTAALRPPRAVKGGQGRSRAVGRLRFELDDHRRWSLWYYGDAQPVPLIPSAEIVAWVGDQALTLAQLEDSTVGSRRPPGGEAVVVRGRAAGVWVEAEFLVAAAATPQAAITVTIFPD
Ga0137360_114417092	3300012361	Vadose Zone Soil	MDRRTFVLLTGASSAALIRPPDRLSDSPPWADGRKGGRALGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVE
Ga0137395_103962231	3300012917	Vadose Zone Soil	MDRRTFVLLTGATSGALIRPPVRLSHRPTGTDRRSGGPVVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPPGGDAVV
Ga0137419_105112781	3300012925	Vadose Zone Soil	MSSGLMRPSSTALYRPRPPGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGV
Ga0137416_106662052	3300012927	Vadose Zone Soil	MDRRTFVLLTGGMSSGLMRPSSTALYRPRPPGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPVTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLT
Ga0134077_103308612	3300012972	Grasslands Soil	MDRRTFVLLTGASSAALIRPPDRQSLGPPGADGRTGGQPVGRLRFELDDHHRWSLWYYGDGAPVPLVRGAEIVTWVGDRPLTLAELEDSTVGNRRPPG
Ga0134110_105465262	3300012975	Grasslands Soil	MDRRTFVLLTGAGSAALIRPPDRLPDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLT
Ga0134076_105949401	3300012976	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSDGPTGANRRSGGPAAGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVVWLGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRVAGVWVEAELLTAGGASTPQASVTVT
Ga0134087_105849861	3300012977	Grasslands Soil	MFVLLTGATSGALIRPPVRLSHSPTGADRRSGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPP
Ga0134081_103872682	3300014150	Grasslands Soil	MDRRTFVLLTGAGSAALIRPPDRLSLGPPRAHGATGGRADGRLRFELDDHHRWSLWYYGDGSPVPLVRDAEIVAWVGDRSLTLADLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGASTPQASVT
Ga0134078_101628132	3300014157	Grasslands Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPAPSGVAGTGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAE
Ga0137403_106494453	3300015264	Vadose Zone Soil	MDRRTFVLLTGGVSSGLIRPPSTALHRSRPVGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPLTLAELEDSTVGNRRPPGG
Ga0134072_101175981	3300015357	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTA
Ga0134072_103040141	3300015357	Grasslands Soil	MDRRTFVLLTGTVSSGLIRAPQARRAAAIGRLRFELDDRRRWSLWYYGDGAPVPLIRDAEVVTWLADRPLGLADLEDSTVGSRRPPGGDAVVVRGRVAGVWVEAEFLTAGAAEAPQAVVTVTVFPDRYLPSVKGIRF
Ga0134085_100758441	3300015359	Grasslands Soil	MDRRTFVLLTGASSAALIRPPERQSLGPPGADGRTGGQPVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVTWVGDGPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWV
Ga0134069_12391981	3300017654	Grasslands Soil	MDRRTFVLLTGGVSSGLIRPPSTALHHPPPRGVAGAGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTVR
Ga0134083_103256391	3300017659	Grasslands Soil	MDRRTFVLLTGASSAALIRPPDRLSDSPPRADGRKGGRAVGRLRFELDDRRRWSLWYYGDGSPVPLVRDAEVLTWVGDRPLTLAELEDSTVGSRRPPGGDAVVVRGRASGV
Ga0066667_100021301	3300018433	Grasslands Soil	MFVLLTGATSGALIRPPVRLSHSPTGADRRSGGPAVGRLRFELDDHHRWSLWYYGDGSPVPLVRGAEIVVWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRVAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTV
Ga0066667_108554222	3300018433	Grasslands Soil	MDRRTFVLLTGAGSAALIRPPDRLSDSPPRADGRSGGRAVGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRALGLAELEDSTVGSRRPPGGD
Ga0066662_103675783	3300018468	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSYSPTGAGWRSGGPVVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTVR
Ga0184642_11057501	3300019279	Groundwater Sediment	MMDRRTFVLLTGATSGALLRPPVRLSSDPTRAVGRSGGPGAGRLRFELDDHRRWSLWYYGDGSPVPLVRAAEVVVWVADQPLTLAALEDSTVGNRRPPGGDAVVVRGRAGGVGVEAEFL
Ga0193733_11945111	3300020022	Soil	MDRRTFVLLTGATSGALLRPPVRLSGDPTRAVGRSGGPGAGRLRFELDDHRRWSLWYYGDGSPVPLVRAAEVVVWVADQPLTLAALEDSTVGNRRPPGGDAVVVRGRAGGVWVEAEFLA
Ga0207685_101733992	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRTFVLLTGGVSSGLIRPPSTALHRPPPVGVAGTGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPLTLAELEDSTVGNRRPPGGDAVRNSHDLSSVGDGP
Ga0209350_10077921	3300026277	Grasslands Soil	MDRRTFVLLTGTLSLTAFDRPRPPGAVRAGRMRFELDDRRRWSLWYYGDAQPVALLRDAEVVAWVGDQPVTLAELEDSTVGSRRPPGGTAVVVRGRVAGVWVEAEFLAGETAGSPQAVITVTIFPDRYLPT
Ga0209238_10191574	3300026301	Grasslands Soil	MDRRTFVLLTGASSAALIRPPDRQSLGPPGADGRTGGRAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGA
Ga0209238_11080982	3300026301	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVF
Ga0209240_12021581	3300026304	Grasslands Soil	MDRRTFVLLTGATSGALIRPPVRQSHSPTGAVRRSGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDQPVTLAELEDSTVGNRRPPGGDAVVVRGRAAGVW
Ga0209268_10978771	3300026314	Soil	MDRRTFVLLTGTLSLTAFDRPRPPGAVRAGRMRFELDDRRRWSLWYYGDAQPVALLRDAEVVAWVGDQPVTLAELEDSTVGSRRPPGGTAVVVRGRVAGVWVEAEFLAGEMAGSPQAVITVTIFPDRYLPTVKGVRFF
Ga0209472_10413492	3300026323	Soil	MPTNIVTMDRRTFVLLTGGVSGGLVARPALADARQRPRPHRRDVPGRLRFELDERRRWSLWYYGDGSPVPLVRDAEVLTWVGDRALTLAELEDSAVGSRRPPGGDAVVVRGRAAGVWVEAEFLTA
Ga0209802_12671901	3300026328	Soil	MDRRTFVLLTGGVSSGLIVPPSTALHRPPPSGVAGIGRLRFELDDRRRWSLWYYGDGAPVPLIRDADVVTWLADRAIGLADLEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEFLTAGAAETP
Ga0209802_12972381	3300026328	Soil	MDRRTFVLLTGTASLSTFHRPRPDDAAPAGRLRFELDDRRRWSLWYYGDAQPVALLRDAEVVARVGDQPVTLAELEDITVGSRRPPGGTAVVVRGRAAGVWVEAEFLAGETAGAPLAV
Ga0209158_11677172	3300026333	Soil	MDRRTFVLLTGTASLSTFRRPRPDDAAPAGRLRFELDDRRRWSLWYYGDAQPVALLRDAEVVARVGDQPVTLAELEDITVGSRRPPGGTAVVVRGRAAGVWVEAEFLAGETAGSPLAVITVTIFPDRYLPTVRGVRFFRV
Ga0209057_11017023	3300026342	Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTV
Ga0209806_10055619	3300026529	Soil	MDRRTFVLLTGAGSAALIRPPDRHSPGPPWADGRTSGRAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVAWVGDHPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLAAGGAAT
Ga0209058_10152071	3300026536	Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTAGGASTPQASVTVTVFPDRYLPTVRG
Ga0209056_101806673	3300026538	Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPVVRGAEIVAWVGDRPLTLAELEDSTVGSRRPPGGDAVVVRGRAAGVWVEAELLTA
Ga0209376_13649691	3300026540	Soil	VLLTGGMSSGLIRPPSTALDRPRPPGVAGTGRLRFELDDHHHWSLWYYGDGSPVPLVRGAEIVTWVADRPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAEL
Ga0209805_12160841	3300026542	Soil	MDRRTFVLLTGASSAALIRPPERQSLGPPGADGRTGGPAVGRLRFELDDHHRWSLWYYGEGSPVPLVRGAEIVTWVGDRPLTLAELEDSTVGNRRP
Ga0208995_10030985	3300027388	Forest Soil	MDRRTFVLLTGATSGALIRPPVRQSDSPTGANRRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPLVRGAEIVAWVGDRPLTLAELEDSTVGNRRPPGGDAVVVTEGTIDA
Ga0208993_10669381	3300027480	Forest Soil	MDRRTFVLLTGATSGALIRPPVRQSDSPTGANRRSGGPAVGRLRFELDDHRRWSLWYYGDGSPVPLVRGAEIVAWVGDRPLTLAELEDSTVGNRRPPGGDAVVVRG
Ga0209073_100152221	3300027765	Agricultural Soil	MDRRTFLLLTGATSGALIRPPARPSASRTGAVGRSGGGAEGRLRFELDDRRRWSLWYYGDSQRVALVQNAEVVAWVGDQTLTLAALEDSTVGTRRPPGGDAVVVRGRAAGVWVEAEFFAGVATDVPQAAVTVTVFPDRFLPSVK
Ga0307302_103755132	3300028814	Soil	MMDRRTFVLLTGATSGALLRPPVRLSSDPTRAVGRSGGPGAGRLRFELDDHRRWSLWYYGDGSPVPLVRAAEVVVWVADQPLTLAALEDSTVGNRRPPGGDAVVVRGRAGGVWVEAEFLATRSGSAPQAAVTLTV
Ga0307471_1000049081	3300032180	Hardwood Forest Soil	MDRRTFVLLTGAAATAPLHPTRPFGRTGQGKAGRLQFELDDRRRWSLWYYGDGSPVPLIRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGKAVVV
Ga0307471_1000918871	3300032180	Hardwood Forest Soil	MDRRTFVLLTGATSGALIRPPVRLSHSPTGAGWRSGGPAVGRLRFELDDHRRWSLWYYGEGSPVPVVRGAEIVAWVGDQPLTLAELEDSTVGNRRPPGGDAVVVRGRAAGVWVEAELLTAGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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