Metagenome / Metatranscriptome Family F097099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MIRLWVLIGLILASMLTVVALVWMGQLVGATHSACQLYPYTSGCR
Number of Associated Samples	66
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.58 %
% of genes near scaffold ends (potentially truncated)	38.46 %
% of genes from short scaffolds (< 2000 bps)	82.69 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.346 % of family members)
Environment Ontology (ENVO)	Unclassified (52.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 75.56% β-sheet: 0.00% Coil/Unstructured: 24.44%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02274	ADI	47.57
PF00196	GerE	11.65
PF06897	DUF1269	2.91
PF16124	RecQ_Zn_bind	1.94
PF01925	TauE	0.97
PF13191	AAA_16	0.97
PF14691	Fer4_20	0.97
PF01040	UbiA	0.97
PF03553	Na_H_antiporter	0.97
PF13401	AAA_22	0.97
PF00005	ABC_tran	0.97
PF07505	DUF5131	0.97
PF13700	DUF4158	0.97
PF13520	AA_permease_2	0.97
PF01914	MarC	0.97
PF01812	5-FTHF_cyc-lig	0.97
PF02899	Phage_int_SAM_1	0.97
PF01797	Y1_Tnp	0.97
PF13365	Trypsin_2	0.97
PF00561	Abhydrolase_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	47.57
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	47.57
COG4874	Uncharacterized conserved protein	Function unknown [S]	47.57
COG4803	Uncharacterized membrane protein	Function unknown [S]	2.91
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.97
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.97
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.97
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.97
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.97
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.97
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.96 %
Unclassified	root	N/A	22.12 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.92 %
Unclassified	root	N/A	22.12 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Unclassified	root	N/A	22.12 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.92 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.85 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.92 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.92 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.96 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.96 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.96 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.96 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	1.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Micromonospora auratinigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora auratinigra	0.96 %
Nocardia asiatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asiatica	0.96 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	1.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Micromonospora auratinigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora auratinigra	0.96 %
Nocardia asiatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asiatica	0.96 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10127127	Not Available	620	Open in IMG/M
3300000956\|JGI10216J12902_105865061	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005332\|Ga0066388_100681150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1638	Open in IMG/M
3300005332\|Ga0066388_100763023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1565	Open in IMG/M
3300005332\|Ga0066388_106179186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300005332\|Ga0066388_108227925	Not Available	521	Open in IMG/M
3300005363\|Ga0008090_15742368	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005576\|Ga0066708_10783587	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005764\|Ga0066903_100389376	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300005764\|Ga0066903_100430023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2192	Open in IMG/M
3300005764\|Ga0066903_100441160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2169	Open in IMG/M
3300005764\|Ga0066903_100528390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2012	Open in IMG/M
3300005764\|Ga0066903_100949380	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300005764\|Ga0066903_103607956	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	833	Open in IMG/M
3300005764\|Ga0066903_104047896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300005764\|Ga0066903_107700216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300005983\|Ga0081540_1011224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6005	Open in IMG/M
3300006755\|Ga0079222_10233649	Not Available	1139	Open in IMG/M
3300006797\|Ga0066659_10773019	Not Available	792	Open in IMG/M
3300006954\|Ga0079219_12043620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora auratinigra	546	Open in IMG/M
3300009012\|Ga0066710_100924747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1343	Open in IMG/M
3300009137\|Ga0066709_103611107	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009792\|Ga0126374_10762366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300010048\|Ga0126373_10932268	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300010048\|Ga0126373_10932268	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300010359\|Ga0126376_10012095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5401	Open in IMG/M
3300010361\|Ga0126378_10164733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2270	Open in IMG/M
3300010361\|Ga0126378_12998159	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010366\|Ga0126379_10615570	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300010366\|Ga0126379_11219583	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010376\|Ga0126381_100222988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2536	Open in IMG/M
3300010398\|Ga0126383_10371504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300010398\|Ga0126383_10508155	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300010398\|Ga0126383_12366803	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012198\|Ga0137364_10163797	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300012201\|Ga0137365_10069899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2649	Open in IMG/M
3300012202\|Ga0137363_11143673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300012971\|Ga0126369_11381308	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	794	Open in IMG/M
3300016294\|Ga0182041_10488125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asiatica	1066	Open in IMG/M
3300016319\|Ga0182033_10607660	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300016341\|Ga0182035_10598271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300016404\|Ga0182037_11001651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300016404\|Ga0182037_11037405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300016445\|Ga0182038_10615505	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300017959\|Ga0187779_10509754	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300017999\|Ga0187767_10093155	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300021560\|Ga0126371_10320900	Not Available	1679	Open in IMG/M
3300021560\|Ga0126371_10801433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300021560\|Ga0126371_11031749	Not Available	963	Open in IMG/M
3300021560\|Ga0126371_11206469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300021560\|Ga0126371_11381970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300021560\|Ga0126371_11949588	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021560\|Ga0126371_12031472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300027874\|Ga0209465_10053653	Not Available	1932	Open in IMG/M
3300031543\|Ga0318516_10007804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5026	Open in IMG/M
3300031543\|Ga0318516_10023075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3206	Open in IMG/M
3300031543\|Ga0318516_10049351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2285	Open in IMG/M
3300031543\|Ga0318516_10538142	Not Available	669	Open in IMG/M
3300031544\|Ga0318534_10102506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1639	Open in IMG/M
3300031544\|Ga0318534_10155732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300031544\|Ga0318534_10197884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300031544\|Ga0318534_10228696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300031544\|Ga0318534_10729614	Not Available	559	Open in IMG/M
3300031561\|Ga0318528_10133743	Not Available	1315	Open in IMG/M
3300031561\|Ga0318528_10148387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1248	Open in IMG/M
3300031564\|Ga0318573_10683575	Not Available	552	Open in IMG/M
3300031572\|Ga0318515_10074287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300031572\|Ga0318515_10352145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	789	Open in IMG/M
3300031668\|Ga0318542_10233953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300031668\|Ga0318542_10295332	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031713\|Ga0318496_10053313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2097	Open in IMG/M
3300031764\|Ga0318535_10079855	Not Available	1411	Open in IMG/M
3300031764\|Ga0318535_10516918	Not Available	530	Open in IMG/M
3300031765\|Ga0318554_10261834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300031765\|Ga0318554_10683972	Not Available	576	Open in IMG/M
3300031771\|Ga0318546_10830240	Not Available	650	Open in IMG/M
3300031778\|Ga0318498_10319982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	695	Open in IMG/M
3300031781\|Ga0318547_10826253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	577	Open in IMG/M
3300031794\|Ga0318503_10252603	Not Available	572	Open in IMG/M
3300031795\|Ga0318557_10293189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300031796\|Ga0318576_10411687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300031797\|Ga0318550_10366861	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031819\|Ga0318568_10596742	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031831\|Ga0318564_10168449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300031879\|Ga0306919_10061975	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300031880\|Ga0318544_10215377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300031880\|Ga0318544_10305986	Not Available	617	Open in IMG/M
3300031890\|Ga0306925_11202562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	759	Open in IMG/M
3300031890\|Ga0306925_11503927	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031896\|Ga0318551_10881692	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031912\|Ga0306921_10205771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2306	Open in IMG/M
3300031947\|Ga0310909_10101304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2315	Open in IMG/M
3300031947\|Ga0310909_10212016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1612	Open in IMG/M
3300032001\|Ga0306922_10669749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1094	Open in IMG/M
3300032010\|Ga0318569_10311417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300032010\|Ga0318569_10512163	Not Available	559	Open in IMG/M
3300032035\|Ga0310911_10087296	Not Available	1692	Open in IMG/M
3300032054\|Ga0318570_10076800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1430	Open in IMG/M
3300032055\|Ga0318575_10523260	Not Available	602	Open in IMG/M
3300032065\|Ga0318513_10130992	Not Available	1189	Open in IMG/M
3300032094\|Ga0318540_10500419	Not Available	586	Open in IMG/M
3300032261\|Ga0306920_100091711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4488	Open in IMG/M
3300032770\|Ga0335085_10124327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3285	Open in IMG/M
3300033289\|Ga0310914_11614912	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.65%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101271272	3300000597	Forest Soil	MTRLWVLIGLILASMLTVVALAWMGQLVGATHSACQLYPYTSGCR*
JGI10216J12902_1058650612	3300000956	Soil	MIRLWTMFALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR*
Ga0066388_1006811502	3300005332	Tropical Forest Soil	MIRLWVLIGLILASMLTVVALVWMGQLVGATHSACQQYPYTSGCR*
Ga0066388_1007630232	3300005332	Tropical Forest Soil	MVRLWVLSGLILGGLLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0066388_1061791861	3300005332	Tropical Forest Soil	ERGAMIRLWALIGLILASMLTVVALVWMGQLVGATHSACQQHPYTSGCR*
Ga0066388_1082279252	3300005332	Tropical Forest Soil	MIRLWTMVVLILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR*
Ga0008090_157423681	3300005363	Tropical Rainforest Soil	VHVIRLWVLIGLILAGMLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0066708_107835871	3300005576	Soil	VTRLWVLFGLIVAGMLTVVALVWMGQLIGASNSACQQYPY
Ga0066903_1003893761	3300005764	Tropical Forest Soil	MIRLWTLFALIVAGLLTVAALFWMGKLVGATHSACQLYPYTSGCR*
Ga0066903_1004300232	3300005764	Tropical Forest Soil	MTRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR*
Ga0066903_1004411602	3300005764	Tropical Forest Soil	MIRLWVLIGLILASMLTVVALVWMGQLVGATHSACQLYPYTSGCR*
Ga0066903_1005283902	3300005764	Tropical Forest Soil	VTRLWVLFGLIIAGALTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0066903_1009493802	3300005764	Tropical Forest Soil	MARLWLLIGLILSAISTVVALVWMGQLVGATNSACQQYPYTSNCR*
Ga0066903_1036079563	3300005764	Tropical Forest Soil	VLRLWVLFGLILAGMLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0066903_1040478962	3300005764	Tropical Forest Soil	VIRLWVLFGLILAGVLTVVAFVWMGQLVGATNSACQLYPYTSGCR*
Ga0066903_1077002162	3300005764	Tropical Forest Soil	VHRDKTKVLFGLIIADALTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0081540_10112249	3300005983	Tabebuia Heterophylla Rhizosphere	MIRLWTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR*
Ga0079222_102336492	3300006755	Agricultural Soil	MIRLWVLIGLILGGMLTVVALVWMGQLVGASNSACQQYPYTSGCR*
Ga0066659_107730192	3300006797	Soil	GLIVAGMLTVVALVWMGQLIGASNSACQQYPYTSGCR*
Ga0079219_120436201	3300006954	Agricultural Soil	VTRLWVLFGLIIAGMLTVVALVWMGQLVGATHSACQLYPYTSGCR*
Ga0066710_1009247473	3300009012	Grasslands Soil	VTRLWVLFGLIVAGMLTVVALVWMGQLIGASNSACQQYPYTSGCR
Ga0066709_1036111072	3300009137	Grasslands Soil	VTRLWVLFGLIVAGMLTVVALVWMGQLIGASNSACQQYPYTSGCR*
Ga0126374_107623662	3300009792	Tropical Forest Soil	VPRLWVLFGLIIAGMLTVVALVWMGRLVGATNSACQLYPYTSGCR*
Ga0126373_109322682	3300010048	Tropical Forest Soil	VPRLWVLFGLIIAGMLTVVALVWMGRLVAAANSACQLYPYTSGCR*
Ga0126373_109322683	3300010048	Tropical Forest Soil	MIRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR*
Ga0126376_100120952	3300010359	Tropical Forest Soil	MIRLWALIGLILASMLTVVALVWMGQLVGATHSACQQHPYTSGCR*
Ga0126378_101647332	3300010361	Tropical Forest Soil	MIRLWVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR*
Ga0126378_129981592	3300010361	Tropical Forest Soil	MIRLWATFALILPGLLTVVAFFWMGKLVGATHSACQLYPYTSGCR*
Ga0126379_106155702	3300010366	Tropical Forest Soil	MVRLWVLSGLILGGPLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0126379_112195832	3300010366	Tropical Forest Soil	VPRLWVLFGLILAGMLTVVALVWMGQLVGATNSACQLYPSTSGCR*
Ga0126381_1002229882	3300010376	Tropical Forest Soil	MIRLWVLIGLMLASMLTVVALVWMGQLVGASNSACQLYPYTSGCR*
Ga0126383_103715042	3300010398	Tropical Forest Soil	MIRLWVLFGLILAGMLTVVALVWMGQLVGGSNSACQLYPYTSGCR*
Ga0126383_105081552	3300010398	Tropical Forest Soil	MARLWVLFGLVIAGMLTVVALVWMGQLVGATNSACQQYPYTSGCR*
Ga0126383_123668032	3300010398	Tropical Forest Soil	VPRLWVLFGLILAGMLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0137364_101637975	3300012198	Vadose Zone Soil	VTRLWVLFGLIVAGMLTVVALVWMGQLVGASNSACQQYPYTSGCR*
Ga0137365_100698991	3300012201	Vadose Zone Soil	MIRLWTMIALILASMLTVLALVWMGRLVGGSNSACQLYPYTSGCR*
Ga0137363_111436732	3300012202	Vadose Zone Soil	MIRLWTMIALILARMLTVLALVWMGRLVGVSNSACQLYPYTFGCR*
Ga0126369_113813082	3300012971	Tropical Forest Soil	SGCTVLRLWVLFGLILAGMLTVVALVWMGQLVGATNSACQLYPYTSGCR*
Ga0182041_104881251	3300016294	Soil	RLWTVIALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0182033_106076602	3300016319	Soil	VTRLWVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0182035_105982712	3300016341	Soil	MIRLWVLIGLILASMLTVVALAWMGQLVGATHSACQLYPYTSGCR
Ga0182037_110016511	3300016404	Soil	VTRSTSSAIGGDMIRLWTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0182037_110374051	3300016404	Soil	VTRSTSSAIGGDMIRLWTMIALILAGLLTVAAFLWMGKLVGATHSACQLYPYTSGCR
Ga0182038_106155052	3300016445	Soil	MIRLWVLIGLIIGGMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0187779_105097541	3300017959	Tropical Peatland	MIRPWTMIALILASMLTVLALVWMGRLVGASNSACQLYP
Ga0187767_100931551	3300017999	Tropical Peatland	MIKLRTVTALILAGLLTVLALIWVGRLVGASNSACQLYPYTSGCR
Ga0126371_103209001	3300021560	Tropical Forest Soil	VIRLWVLFGLILAGVLTVVALVWMGQLVGATNSACQLYPYTSGCR
Ga0126371_108014331	3300021560	Tropical Forest Soil	TRLWVLIGLILASMLTVVALAWMGQLVGATHSACQLYPYTSGCR
Ga0126371_110317491	3300021560	Tropical Forest Soil	MTRLWVLIGLILASMLTVVALAWMGQLVGATHSACQLYPYTSGCR
Ga0126371_112064692	3300021560	Tropical Forest Soil	VPRLWVLFGLIIAGMLTVVALVWMGQLVGATNSACQLYPYTSGCR
Ga0126371_113819702	3300021560	Tropical Forest Soil	MIRLWVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0126371_119495882	3300021560	Tropical Forest Soil	VTRPWVLFGLIIAGALTVVALVWMGQLVGATNSACQLYPYTSGCR
Ga0126371_120314722	3300021560	Tropical Forest Soil	MIRLWALIGLILASMLTVVALVWMGQLVGATHSACQQYPYTSGCR
Ga0209465_100536532	3300027874	Tropical Forest Soil	ALIGRILAGLATVVALVWMGQLVGGSGGACQQYPYTSGCR
Ga0318516_100078042	3300031543	Soil	MIRLWVVFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTSGCR
Ga0318516_100230754	3300031543	Soil	MIRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR
Ga0318516_100493512	3300031543	Soil	MIRLWVLIGLILGGMLTVVALVWMGQLVGASNSACQQYPYTSGCR
Ga0318516_105381422	3300031543	Soil	VTRLWVLIGLILASMLTVVALAWMGQLVGATHSACQLYPYTSGCR
Ga0318534_101025062	3300031544	Soil	MIRLWTVIALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318534_101557322	3300031544	Soil	MTRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR
Ga0318534_101978842	3300031544	Soil	MIRLWTMIALILAGLLTVAAFLWMGKLVGATHSACQLYPYTSGCR
Ga0318534_102286962	3300031544	Soil	MIRLWTMIALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318534_107296141	3300031544	Soil	MIQLWVLIGLILASMLTVAALAWMGQLVGATHSACQLYPYTSGCR
Ga0318528_101337432	3300031561	Soil	VTRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR
Ga0318528_101483872	3300031561	Soil	GGDMIRLWTVIALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318573_106835751	3300031564	Soil	MIRLWTMFALILAGILTVVVFFWMGKLVGATHSACQLYPCTSGCR
Ga0318515_100742871	3300031572	Soil	MTRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSG
Ga0318515_103521453	3300031572	Soil	TGGVMIRLWVLIGLILASMLTVVALAWMGQLVGATNSACQLYPYTSGCR
Ga0318542_102339531	3300031668	Soil	VIRLWVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0318542_102953322	3300031668	Soil	MIRLWVMIGLIAAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318496_100533133	3300031713	Soil	MIRLWVIFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTSGCR
Ga0318535_100798551	3300031764	Soil	MIQLWVLIGLILASMLTVAALAWMGQLVGATHSACQ
Ga0318535_105169181	3300031764	Soil	ILAGILTVVVFFWMGKLVGATHSACQLYPCTSGCR
Ga0318554_102618341	3300031765	Soil	SVTRSTSSAIGGDMIRLWTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318554_106839721	3300031765	Soil	ALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318546_108302402	3300031771	Soil	MIRLWTMIALILAGLLTVAAFLWMGKLVGATHSACQL
Ga0318498_103199822	3300031778	Soil	PAPSSVTRSTSSAIGGDMIRLWTMIALILAGLLTVAAFLWMGKLVGATHSACQLYPYTSGCR
Ga0318547_108262531	3300031781	Soil	LWTMIALILAGLLTVAAFLWMGKLVGATHSACQLYPYTSGCR
Ga0318503_102526031	3300031794	Soil	WTMIALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318557_102931891	3300031795	Soil	WTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318576_104116872	3300031796	Soil	LLNGGVMIRLWVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0318550_103668612	3300031797	Soil	MIRLWTMIALILAGLLTVAAFLWMGKLVGATHSACQLY
Ga0318568_105967421	3300031819	Soil	MIRLWTMFALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318564_101684493	3300031831	Soil	GLILGGMLTVVALVWMGQLVGASNSACQQYPYTSGCR
Ga0306919_100619751	3300031879	Soil	MIRLWVVFGLIVAGMLTVVALVWVGQLVGASNSACQQYP
Ga0318544_102153772	3300031880	Soil	MIRLWTMFALILAGILTVAAFFWMGKLVGATRSACQLYPYTSGCR
Ga0318544_103059861	3300031880	Soil	IRLWVLIGLILGGMLTVVALVWMGQLVGASNSACQQYPYTSGCR
Ga0306925_112025621	3300031890	Soil	MIRLWTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0306925_115039272	3300031890	Soil	MIRLWTMFALILAGILTVVVFFWMGKLVGATHSACQLYPYTSGCR
Ga0318551_108816921	3300031896	Soil	MIRLWTVFALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0306921_102057713	3300031912	Soil	WVLIGLILASMLTVVALVWMGQLVGASNSACQLYPYTSGCR
Ga0310909_101013044	3300031947	Soil	MIRLWVIFGLIVGGILTVVALVWVGQLVGASNSACQQYPYTSGCR
Ga0310909_102120161	3300031947	Soil	ILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0306922_106697492	3300032001	Soil	RLWTMFALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318569_103114171	3300032010	Soil	LWTMIALILAGLLTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318569_105121632	3300032010	Soil	MIRLWVVFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTSG
Ga0310911_100872963	3300032035	Soil	MIRLWVLIGLILGGMLTVVALVWMGQLVGASNSACQQYP
Ga0318570_100768003	3300032054	Soil	VFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTSGCR
Ga0318575_105232601	3300032055	Soil	SSAIGGVMIRLWTMFALILAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR
Ga0318513_101309922	3300032065	Soil	MIRLWVIFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTS
Ga0318540_105004192	3300032094	Soil	MIRLWVVFGLIVAGMLTVVALVWVGQLVGASNSACQQYPYTSGCRP
Ga0306920_1000917114	3300032261	Soil	VPRPWVLFGLIIAGALTVVALVWMGQLVGATNSACQLYPYTSGCR
Ga0335085_101243273	3300032770	Soil	MIRPWTMIALILASMLTVLALVWMGRLVGASNSACQLYPYTSGCR
Ga0310914_116149121	3300033289	Soil	MIGLIAAGILTVAAFFWMGKLVGATHSACQLYPYTSGCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences