NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F097273

Metagenome Family F097273

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097273
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 50 residues
Representative Sequence MTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLTTIKTINTYQL
Number of Associated Samples 73
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.88 %
% of genes near scaffold ends (potentially truncated) 7.69 %
% of genes from short scaffolds (< 2000 bps) 89.42 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (82.692 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(57.692 % of family members)
Environment Ontology (ENVO) Unclassified
(79.808 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.423 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.38%    β-sheet: 26.92%    Coil/Unstructured: 57.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.16.1.5: L-aminoacid/polyamine oxidased2ivda22ivd0.67689
d.16.1.5: L-aminoacid/polyamine oxidased1seza21sez0.63598
d.238.1.1: Hypothetical protein TM0875d1o22a_1o220.63526
d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domaind1t94a11t940.63492
d.343.1.1: MM3350-liked2i1sa12i1s0.61822


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00118Cpn60_TCP1 1.94
PF14743DNA_ligase_OB_2 0.97
PF13884Peptidase_S74 0.97
PF04404ERF 0.97
PF00166Cpn10 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 1.94
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.69 %
All OrganismsrootAll Organisms17.31 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002511|JGI25131J35506_1053556Not Available559Open in IMG/M
3300002760|JGI25136J39404_1069481Not Available656Open in IMG/M
3300002760|JGI25136J39404_1079564Not Available613Open in IMG/M
3300006090|Ga0082015_1025499Not Available985Open in IMG/M
3300006613|Ga0101494_1010863Not Available575Open in IMG/M
3300006735|Ga0098038_1072370All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1218Open in IMG/M
3300006735|Ga0098038_1283928Not Available517Open in IMG/M
3300006736|Ga0098033_1143244Not Available671Open in IMG/M
3300006737|Ga0098037_1014958Not Available2952Open in IMG/M
3300006737|Ga0098037_1113292Not Available932Open in IMG/M
3300006737|Ga0098037_1155627All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157765Open in IMG/M
3300006738|Ga0098035_1101209Not Available1004Open in IMG/M
3300006753|Ga0098039_1084249Not Available1099Open in IMG/M
3300006753|Ga0098039_1184133Not Available710Open in IMG/M
3300006789|Ga0098054_1078611All Organisms → Viruses → Predicted Viral1245Open in IMG/M
3300006789|Ga0098054_1234464Not Available664Open in IMG/M
3300006789|Ga0098054_1303201Not Available571Open in IMG/M
3300006793|Ga0098055_1238872Not Available685Open in IMG/M
3300006900|Ga0066376_10746206Not Available534Open in IMG/M
3300006916|Ga0070750_10392799All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157580Open in IMG/M
3300006921|Ga0098060_1169508All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157602Open in IMG/M
3300006928|Ga0098041_1172260Not Available695Open in IMG/M
3300006928|Ga0098041_1232312Not Available589Open in IMG/M
3300006929|Ga0098036_1122361Not Available797Open in IMG/M
3300006929|Ga0098036_1155125Not Available699Open in IMG/M
3300006929|Ga0098036_1202237All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157603Open in IMG/M
3300006929|Ga0098036_1229227Not Available563Open in IMG/M
3300006947|Ga0075444_10252450Not Available693Open in IMG/M
3300006988|Ga0098064_115205Not Available1145Open in IMG/M
3300007963|Ga0110931_1032830All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1570Open in IMG/M
3300008216|Ga0114898_1054267Not Available1270Open in IMG/M
3300008217|Ga0114899_1168638Not Available705Open in IMG/M
3300008219|Ga0114905_1229838Not Available589Open in IMG/M
3300009030|Ga0114950_10782372Not Available752Open in IMG/M
3300009030|Ga0114950_11577301Not Available507Open in IMG/M
3300009149|Ga0114918_10651066Not Available554Open in IMG/M
3300009432|Ga0115005_10209984Not Available1520Open in IMG/M
3300009432|Ga0115005_10690740Not Available819Open in IMG/M
3300009432|Ga0115005_10690740Not Available819Open in IMG/M
3300009481|Ga0114932_10624949Not Available629Open in IMG/M
3300009622|Ga0105173_1076867Not Available592Open in IMG/M
3300010148|Ga0098043_1188191Not Available574Open in IMG/M
3300010150|Ga0098056_1145956Not Available800Open in IMG/M
3300010151|Ga0098061_1264137Not Available597Open in IMG/M
3300010155|Ga0098047_10306940Not Available599Open in IMG/M
3300011129|Ga0151672_105891All Organisms → Viruses → Predicted Viral1282Open in IMG/M
3300012928|Ga0163110_11101019Not Available636Open in IMG/M
3300012952|Ga0163180_10559484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium864Open in IMG/M
3300013101|Ga0164313_10450614Not Available1072Open in IMG/M
3300017705|Ga0181372_1083989Not Available542Open in IMG/M
3300017720|Ga0181383_1195481Not Available538Open in IMG/M
3300017775|Ga0181432_1281054Not Available527Open in IMG/M
3300017782|Ga0181380_1091943Not Available1057Open in IMG/M
3300018416|Ga0181553_10101309Not Available1778Open in IMG/M
3300018416|Ga0181553_10525756All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157630Open in IMG/M
3300018420|Ga0181563_10152847Not Available1449Open in IMG/M
3300018428|Ga0181568_10965170Not Available650Open in IMG/M
3300020235|Ga0212228_1341202Not Available1483Open in IMG/M
3300020379|Ga0211652_10031220Not Available1596Open in IMG/M
3300020420|Ga0211580_10217161Not Available789Open in IMG/M
3300020436|Ga0211708_10412083Not Available554Open in IMG/M
3300021087|Ga0206683_10368826Not Available722Open in IMG/M
3300021368|Ga0213860_10126584All Organisms → Viruses → Predicted Viral1123Open in IMG/M
3300021978|Ga0232646_1065186Not Available1247Open in IMG/M
3300025038|Ga0208670_116463Not Available769Open in IMG/M
3300025066|Ga0208012_1005931Not Available2406Open in IMG/M
3300025066|Ga0208012_1006391Not Available2290Open in IMG/M
3300025066|Ga0208012_1046397Not Available641Open in IMG/M
3300025078|Ga0208668_1029703Not Available1070Open in IMG/M
3300025086|Ga0208157_1012814Not Available2722Open in IMG/M
3300025097|Ga0208010_1042786Not Available1026Open in IMG/M
3300025098|Ga0208434_1098599Not Available574Open in IMG/M
3300025101|Ga0208159_1054957Not Available811Open in IMG/M
3300025110|Ga0208158_1019566Not Available1784Open in IMG/M
3300025125|Ga0209644_1134100Not Available590Open in IMG/M
3300025128|Ga0208919_1021961Not Available2389Open in IMG/M
3300025128|Ga0208919_1065349All Organisms → Viruses → Predicted Viral1219Open in IMG/M
3300025128|Ga0208919_1104799Not Available908Open in IMG/M
3300025128|Ga0208919_1131093All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon788Open in IMG/M
3300025131|Ga0209128_1119552Not Available824Open in IMG/M
3300025132|Ga0209232_1145582All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157760Open in IMG/M
3300025141|Ga0209756_1305847Not Available559Open in IMG/M
3300025151|Ga0209645_1021346Not Available2461Open in IMG/M
3300025151|Ga0209645_1045777All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300025151|Ga0209645_1137100All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157764Open in IMG/M
3300025151|Ga0209645_1171668All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157656Open in IMG/M
3300025280|Ga0208449_1090845Not Available736Open in IMG/M
3300025286|Ga0208315_1125663Not Available589Open in IMG/M
3300025873|Ga0209757_10202138Not Available629Open in IMG/M
3300025873|Ga0209757_10204556Not Available625Open in IMG/M
3300027849|Ga0209712_10780400Not Available522Open in IMG/M
3300029309|Ga0183683_1000430Not Available23047Open in IMG/M
3300029309|Ga0183683_1000896Not Available13539Open in IMG/M
3300029309|Ga0183683_1001318Not Available10343Open in IMG/M
3300029309|Ga0183683_1006593Not Available3348Open in IMG/M
3300029309|Ga0183683_1024388Not Available1159Open in IMG/M
3300029309|Ga0183683_1030092Not Available963Open in IMG/M
3300029318|Ga0185543_1030426All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300029318|Ga0185543_1112034Not Available516Open in IMG/M
3300029318|Ga0185543_1115008Not Available506Open in IMG/M
3300029319|Ga0183748_1001353Not Available14803Open in IMG/M
3300031773|Ga0315332_10789682Not Available577Open in IMG/M
3300031775|Ga0315326_10281146Not Available1090Open in IMG/M
3300032019|Ga0315324_10154375Not Available861Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine57.69%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine13.46%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.81%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.85%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.85%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface2.88%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.88%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.96%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.96%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.96%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.96%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.96%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.96%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300006090Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124EnvironmentalOpen in IMG/M
3300006613Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300006988Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsClEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011129Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02EnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020235Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N075EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020420Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300021087Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021978Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmerEnvironmentalOpen in IMG/M
3300025038Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029309Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032019Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25131J35506_105355613300002511MarineITFTDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIFSYKL*
JGI25136J39404_106948113300002760MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIFSYKL*
JGI25136J39404_107956423300002760MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIFSYKL*
Ga0082015_102549923300006090MarineMKYEIEITYIDNSIQYITSTTKTLNQSDLDFLTDLNIDLTTIKSTNYTKL*
Ga0101494_101086313300006613Diffuse Hydrothermal Flow Volcanic VentMTYEHEILFTDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKSVNSYKL*
Ga0098038_107237033300006735MarineMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLSTIKTISTEKL*
Ga0098038_128392813300006735MarineMIYEHEITYNDDSLQYLNSITNYLNDEDKEFLEALGVDLTTIKSVNTYEINSQQ*
Ga0098033_114324413300006736MarineMTFEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVNLNTIKTINTYQL*
Ga0098037_101495883300006737MarineMIYEHEITFNDHSIQYLTSTTNYLNDEDKEFLEALDVDLSTIKLINTYKL*
Ga0098037_111329243300006737MarineMTYEHEITFNDDSLQYLNSTTNYLNDEDKEFLKALGVDLTTIKSVNTYEINSQQ*
Ga0098037_115562723300006737MarineMTYEHEITFNDNSIQYLESTTNYLNSEDKEFLLDLNVDLSTIKSINTYEINS*
Ga0098035_110120923300006738MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIYSYKL*
Ga0098039_108424923300006753MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKSVNSYKL*
Ga0098039_118413323300006753MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLTDLGVDLTTIKSIHSYKL*
Ga0098054_107861123300006789MarineMNYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYQL*
Ga0098054_123446413300006789MarineMTFEIQITFIDNSIQYLTSTTPYLNNSDLDFLTDLAVDLTTIKSIYSYKL*
Ga0098054_130320123300006789MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLIDLNVDLTTIKSIYSYKL*
Ga0098055_123887213300006793MarineMIYEHEITFNDNSIQYLESETNFLSDIDKDFLEELGVDLSTIKSISTEEL**
Ga0066376_1074620613300006900MarineMDNITVNQINNNMTYEHEITFTDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKSVNSYKL*
Ga0070750_1039279923300006916AqueousMTYEHEIIFYDDSIQYLTSTTNYLNEEDEEFLLNLDVDLSTIKEINTYEINT*
Ga0098060_116950823300006921MarineMTYEHEITFNDNSIQYLESTTNYLNSEDKEFLLDLDVDLSTIKSINTYEINS*
Ga0098041_117226013300006928MarineMKFEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYQL*
Ga0098041_123231223300006928MarineMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLSTIKTISTEKL**
Ga0098036_112236113300006929MarineTTMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLAVDLTTIKSIYSYKL*
Ga0098036_115512523300006929MarineMTFEIEITFTDNSIQYLTSTTNYLNQSDLDFLTDLDVDLTTIKSIYSYKL*
Ga0098036_120223713300006929MarineMTYEHEITFNDDSLQYLNSTTNYLNDEDKEFLEALGVDLTTIKTVTTYEINS*
Ga0098036_122922723300006929MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLIDLLVDLNTIKTINTYQL*
Ga0075444_1025245013300006947MarineMTFEHEITFTDDSIQYLTSTTNYLNDDDKQFLTGLLVDLNTIKTINTYKV*
Ga0098064_11520523300006988MarineMTFEIQITFTDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIYSYKL*
Ga0110931_103283043300007963MarineMTYEHEITFNDDSLQYLNSTTNYLNNEDKEFLEALGVDLTTIKTVTTYEINS*
Ga0114898_105426733300008216Deep OceanMTYEIEITFNDDSIQYITSTTPYLNDDDKQYLSDLNVDLSTIKSIHSYKL*
Ga0114899_116863813300008217Deep OceanMTYEIEITFNDESIQYITSKTPYLNDDDKQYLSDLNVDLSTIKSIRSYKL*
Ga0114905_122983813300008219Deep OceanMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYSI*
Ga0114950_1078237223300009030Deep SubsurfaceMTFEHEITFNDNSIQYLTSTTNYLNKSDLDFLTDLNVDLNTIKTIFTYKL*
Ga0114950_1157730113300009030Deep SubsurfaceMTFEHEITFTDNSIQYLTSTTNYLNKSDLDFLTDLNVDLKTIKSIFTYKL*
Ga0114918_1065106623300009149Deep SubsurfaceMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKTIYSYKL*
Ga0115005_1020998423300009432MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKTIYSYKL*
Ga0115005_1069074013300009432MarineMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIYSYKL*
Ga0115005_1069074033300009432MarineMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSI
Ga0114932_1062494913300009481Deep SubsurfaceMIYEHEITFNDNSIQYLNSTTNYLNEDDKEFLEALGVDLTTIKKVTTYETNSQ*
Ga0105173_107686723300009622Marine OceanicMTYEHEITFTDDSIQYLTSTTNYLNDDDKLFLIDLLVNLNTIKTINTYQL*
Ga0098043_118819113300010148MarineMTFEHEIVFNDDSIQYLTSSTNYLNDDDKQFLTELGVDLTTIKTITTYKL*
Ga0098056_114595623300010150MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLTTIKTINTYQL*
Ga0098061_126413723300010151MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLIDLNVDLTTIKSIYSYKL*
Ga0098047_1030694013300010155MarineMTYEHEITFNDDTIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYQL*
Ga0151672_10589113300011129MarineNMTYEHEITFNDYSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYQL*
Ga0163110_1110101913300012928Surface SeawaterMKYEHEITFNDNSIQYLESETNYLSDIDKEFLEQVGVDLTTIESVNTYKI*
Ga0163180_1055948413300012952SeawaterMTYEHEITFNDDSIQYLTSKTNYLNSEDKEFLLDLDVDLSTIKSINTYEINSQ*
Ga0164313_1045061413300013101Marine SedimentMTYEIEITYSDNSIQYLTSTTPYLNQEDLDFLLDTDVDLTTITKTNSTKL*
Ga0181372_108398913300017705MarineMTYEHEITFNDDSIQYLTSTTNYLNNDDKQFLTDLLVDLNTIKTINTYQL
Ga0181383_119548123300017720SeawaterMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIYSYKL
Ga0181432_128105413300017775SeawaterMTFEIQITFTDNSIQYLTSTTNYLNKSDLDFLTDLGVDLTTIKSIHSYKL
Ga0181380_109194333300017782SeawaterMKFEHEITFNDDSIQYLTSTTNYLNDDDKQFLIDLLVDLNTIKTINTYQL
Ga0181553_1010130913300018416Salt MarshMTFEHEITFKDNSIQYLTSNTNYLNDDDKQFLIEIGVDLTTIKSINTYEL
Ga0181553_1052575633300018416Salt MarshMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLTTIKSVTTYETNSQ
Ga0181563_1015284713300018420Salt MarshMTFEHEITFKDNSIQYLTSNTNYLNDDDKQFLIEIGVDLTTIKSINTYKL
Ga0181568_1096517013300018428Salt MarshMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLTTIKSINTYEINSQ
Ga0212228_134120233300020235SedimentMTFEHEITFNDNSIQYLTSTTNYLNKSDLDFLTDLNVDLNTIKTIFTYKL
Ga0211652_1003122023300020379MarineMTYEHEITFNDNSIQYLESTTNYLNSEDKEFLLDLDVDLSTIKSINTYEINS
Ga0211580_1021716113300020420MarineMYKYEHEITFTDGSVQYLQSETNHLSDIDKEFLEETGVDFSTIKTT
Ga0211708_1041208323300020436MarineMKYEHEITFNDNSIQYLESETNYLSDIDKDFLEELGVDLSTIKTITTYENNI
Ga0206683_1036882613300021087SeawaterMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIYSYKL
Ga0213860_1012658433300021368SeawaterMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLTTIKKVTTYETNSQQ
Ga0232646_106518643300021978Hydrothermal Vent FluidsMTFEHEITFTDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKSVNSYKL
Ga0208670_11646313300025038MarineMTFEIQITFTDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIYSYKL
Ga0208012_100593123300025066MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLIDLDVDLTTIKSIYSYKL
Ga0208012_100639123300025066MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKSVNSYKL
Ga0208012_104639713300025066MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLIDLNVDLTTIKSIYSYKL
Ga0208668_102970333300025078MarineMKYEIEITYIDNSIQYITSTTKTLNQSDLDFLTDLNIDLTTIKSTNYTKL
Ga0208157_101281433300025086MarineMIYEHEITFNDHSIQYLTSTTNYLNDEDKEFLEALDVDLSTIKLINTYKL
Ga0208010_104278623300025097MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIYSYKL
Ga0208434_109859913300025098MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLTDLLVDLNTIKTINTYQL
Ga0208159_105495723300025101MarineMIYEHEITYNDDSLQYLNSITNYLNDEDKEFLEALGVDLTTIKSVNTYEINSQQ
Ga0208158_101956663300025110MarineMIYEHEITYNDNDIQYINSTTNYLNEDDKEFLEALGVDLSTIKTISTEKL
Ga0209644_113410023300025125MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLNVDLTTIKSIFSYKL
Ga0208919_102196113300025128MarineITFNDHSIQYLTSTTNYLNDEDKEFLEALDVDLSTIKLINTYKL
Ga0208919_106534923300025128MarineMTYEHEITFNDDSLQYLNSTTNYLNNEDKEFLEALGVDLTTIKTVTTYEINS
Ga0208919_110479923300025128MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLAVDLTTIKSIYSYKL
Ga0208919_113109333300025128MarineMIYEHEITFNDHSIQYLTSTTNYLNDEDKEFLEALDVDLSTIKLINTYKLX
Ga0209128_111955223300025131MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIYSYKL
Ga0209232_114558233300025132MarineMIYEHEITFYDDSIQYLTSTTNYLNEEDEEFLLELGVDLSTIKTITTYEINS
Ga0209756_130584723300025141MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKQFLIDELIDINTIKSILTYKL
Ga0209645_102134623300025151MarineMTFEHEIVFNDDSIQYLTSSTNYLNDDDKQFLTELGVDLTTIKTITTYNL
Ga0209645_104577733300025151MarineMTYEHEITFYDDSIQYLTSTTNYLNEEDEEFLLDLGVDLSTIKTISTEEL
Ga0209645_113710023300025151MarineMIYEHEITYNDDSLQYLNSTTNYLNDEDKEFLEALGVDLTTIKKVTTYEINSQ
Ga0209645_117166823300025151MarineMTYEHEITFNDNSIQYLESTTNYLNSEDKEFLLDLDVDLSTIKSINTYEINSQQ
Ga0208449_109084513300025280Deep OceanMTYEIEITFNDDSIQYITSTTPYLNDDDKQYLSDLNVDLSTIKSIHSYKL
Ga0208315_112566323300025286Deep OceanMTYEIEITFNDESIQYITSKTPYLNDDDKQYLSDLNVDLSTIKSIRSYKL
Ga0209757_1020213813300025873MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIFSYKL
Ga0209757_1020455613300025873MarineMTFEIEITFNDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIFSYKL
Ga0209712_1078040013300027849MarineMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTNLNVDLTTIKSIFSYKL
Ga0183683_1000430103300029309MarineMTFEHEITFNDDSIQYLTSTTNYLNDDDKQFLIELDVDLTTIKTITTYKL
Ga0183683_100089673300029309MarineMTYEHEITFNDHSIQYLESTTNYLNSEDKEFLESLDVDLTTIKSVNTYEINSQQ
Ga0183683_1001318213300029309MarineMKYEHEITFNDNSIQYLQSETNYLSDIDKEFLEEVDVDLSTIKSIITYEI
Ga0183683_100659313300029309MarineMTYEHEITFNDDSIQYLTSTTNYLNDDDKNFLIELDVDLTTIKTITTYKL
Ga0183683_102438813300029309MarineMTFEHEITFNDDSIQYLTSTTNYLNDDDKQFLIDLDVDLTTIKTITTYKL
Ga0183683_103009213300029309MarineMKYEHEITFNDHSIQYLESETNYLSDIDKEFLEEVGVDLTTIKEINTYKL
Ga0185543_103042613300029318MarineMTFEHEIVFNDDSIQYLTSSTNYLNDDDKQFLTELGVDLTTIKTIT
Ga0185543_111203423300029318MarineMIYEHEITFYDDSIQYLTSTTNYLNEEDEEFLLDLDVDLSTIKEINTYEINSQ
Ga0185543_111500823300029318MarineMKYEHEITFNDNSIQYLESETNYLSDIDKEFLTEIGVDLSTIKTILTYENNI
Ga0183748_1001353173300029319MarineMTFEHEITFNDDSIQYLTSTTNYLNDDDKQFLTELGVDLTTIKSITTYKL
Ga0315332_1078968213300031773SeawaterMTFEIEITYSDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSIHSYKL
Ga0315326_1028114623300031775SeawaterMTFEIEITFTDNSIQYLTSTTNYLNKSDLDFLTDLDVDLTTIKSINSYKL
Ga0315324_1015437513300032019SeawaterMTYEHEITFNDDSIQYLTSTTNYLNDNDKQFLTDLLVDLNTIKSVNSYKL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.