Metagenome / Metatranscriptome Family F097305

Basic Information
Family ID	F097305
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	55 residues
Representative Sequence	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG
Number of Associated Samples	95
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.81 %
% of genes near scaffold ends (potentially truncated)	38.46 %
% of genes from short scaffolds (< 2000 bps)	78.85 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (26.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 0.00% Coil/Unstructured: 64.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00275	EPSP_synthase	54.81
PF00563	EAL	5.77
PF11164	DUF2948	3.85
PF00920	ILVD_EDD	3.85
PF13531	SBP_bac_11	1.92
PF08448	PAS_4	1.92
PF13505	OMP_b-brl	0.96
PF12860	PAS_7	0.96
PF13714	PEP_mutase	0.96
PF00126	HTH_1	0.96
PF10979	DUF2786	0.96
PF02637	GatB_Yqey	0.96
PF03884	YacG	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	7.69
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	5.77
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	5.77
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	5.77
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	5.77
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	0.96
COG1610	Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity	General function prediction only [R]	0.96
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	0.96
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	3.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	3.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT01ETDBN	Not Available	514	Open in IMG/M
3300000041\|ARcpr5oldR_c000063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19343	Open in IMG/M
3300001978\|JGI24747J21853_1007927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1030	Open in IMG/M
3300002820\|JGI25490J38602_10149	Not Available	564	Open in IMG/M
3300003994\|Ga0055435_10072915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300004025\|Ga0055433_10013800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300004114\|Ga0062593_102294248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300004156\|Ga0062589_100632120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300004156\|Ga0062589_102047796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	582	Open in IMG/M
3300005093\|Ga0062594_100385174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300005168\|Ga0066809_10023008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1275	Open in IMG/M
3300005290\|Ga0065712_10092898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2312	Open in IMG/M
3300005328\|Ga0070676_10433874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	920	Open in IMG/M
3300005332\|Ga0066388_102476565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300005334\|Ga0068869_101164177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300005337\|Ga0070682_100211137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1376	Open in IMG/M
3300005338\|Ga0068868_101130858	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005456\|Ga0070678_101908382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005457\|Ga0070662_100303050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300005466\|Ga0070685_10771282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300005535\|Ga0070684_101954475	Not Available	554	Open in IMG/M
3300005615\|Ga0070702_101273813	Not Available	596	Open in IMG/M
3300005617\|Ga0068859_101393760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300005713\|Ga0066905_100418315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300006573\|Ga0074055_10014818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1296	Open in IMG/M
3300006580\|Ga0074049_13081331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300006854\|Ga0075425_101046275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300006904\|Ga0075424_100624240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300009093\|Ga0105240_12318385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300009094\|Ga0111539_10443472	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300009147\|Ga0114129_12420581	Not Available	629	Open in IMG/M
3300009156\|Ga0111538_10040717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5988	Open in IMG/M
3300010046\|Ga0126384_12500756	Not Available	501	Open in IMG/M
3300010362\|Ga0126377_10395664	Not Available	1391	Open in IMG/M
3300010371\|Ga0134125_11855497	Not Available	655	Open in IMG/M
3300010399\|Ga0134127_10891552	Not Available	944	Open in IMG/M
3300012501\|Ga0157351_1026586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300012896\|Ga0157303_10000181	All Organisms → cellular organisms → Bacteria → Proteobacteria	7554	Open in IMG/M
3300012897\|Ga0157285_10014172	Not Available	1608	Open in IMG/M
3300012897\|Ga0157285_10140511	Not Available	708	Open in IMG/M
3300012908\|Ga0157286_10085499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M
3300012912\|Ga0157306_10074570	Not Available	921	Open in IMG/M
3300012948\|Ga0126375_10290747	Not Available	1129	Open in IMG/M
3300012958\|Ga0164299_11220572	Not Available	570	Open in IMG/M
3300013105\|Ga0157369_12667068	Not Available	504	Open in IMG/M
3300013306\|Ga0163162_11666102	Not Available	728	Open in IMG/M
3300013308\|Ga0157375_10133243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2606	Open in IMG/M
3300014262\|Ga0075301_1131586	Not Available	568	Open in IMG/M
3300014308\|Ga0075354_1069945	Not Available	683	Open in IMG/M
3300014318\|Ga0075351_1004666	All Organisms → cellular organisms → Bacteria → Proteobacteria	1798	Open in IMG/M
3300015371\|Ga0132258_10362802	Not Available	3587	Open in IMG/M
3300015372\|Ga0132256_102968460	Not Available	570	Open in IMG/M
3300015372\|Ga0132256_103331211	Not Available	540	Open in IMG/M
3300015374\|Ga0132255_105860249	Not Available	520	Open in IMG/M
3300017947\|Ga0187785_10180495	Not Available	906	Open in IMG/M
3300019356\|Ga0173481_10001899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5199	Open in IMG/M
3300019356\|Ga0173481_10005963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3268	Open in IMG/M
3300019361\|Ga0173482_10004355	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300019361\|Ga0173482_10005578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2961	Open in IMG/M
3300019361\|Ga0173482_10311243	Not Available	697	Open in IMG/M
3300019361\|Ga0173482_10552905	Not Available	569	Open in IMG/M
3300023069\|Ga0247751_1008471	Not Available	1494	Open in IMG/M
3300023072\|Ga0247799_1001735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3025	Open in IMG/M
3300025551\|Ga0210131_1045778	Not Available	701	Open in IMG/M
3300025728\|Ga0207655_1117691	Not Available	886	Open in IMG/M
3300025912\|Ga0207707_10078752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2878	Open in IMG/M
3300025917\|Ga0207660_10109939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2073	Open in IMG/M
3300025919\|Ga0207657_10432550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1034	Open in IMG/M
3300025925\|Ga0207650_10921060	Not Available	742	Open in IMG/M
3300025932\|Ga0207690_10042069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2998	Open in IMG/M
3300025985\|Ga0210117_1019108	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300026023\|Ga0207677_10021487	All Organisms → cellular organisms → Bacteria	3945	Open in IMG/M
3300026041\|Ga0207639_11164665	Not Available	723	Open in IMG/M
3300026095\|Ga0207676_10006437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	8295	Open in IMG/M
3300026714\|Ga0207567_101528	Not Available	531	Open in IMG/M
3300026731\|Ga0207523_101673	Not Available	601	Open in IMG/M
3300026826\|Ga0207517_1002738	Not Available	588	Open in IMG/M
3300026960\|Ga0207582_1007810	Not Available	930	Open in IMG/M
3300026976\|Ga0207525_108084	Not Available	546	Open in IMG/M
3300027395\|Ga0209996_1060354	Not Available	582	Open in IMG/M
3300027434\|Ga0207565_100943	Not Available	590	Open in IMG/M
3300027475\|Ga0207607_103587	Not Available	507	Open in IMG/M
3300027560\|Ga0207981_1014633	Not Available	1405	Open in IMG/M
3300027665\|Ga0209983_1024682	Not Available	1267	Open in IMG/M
3300027717\|Ga0209998_10094506	Not Available	736	Open in IMG/M
3300027907\|Ga0207428_10034138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4172	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4895	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10004860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3499	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1116640	Not Available	656	Open in IMG/M
3300031547\|Ga0310887_10462453	Not Available	758	Open in IMG/M
3300031720\|Ga0307469_11924034	Not Available	573	Open in IMG/M
3300031740\|Ga0307468_100007717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3955	Open in IMG/M
3300031940\|Ga0310901_10501022	Not Available	544	Open in IMG/M
3300032000\|Ga0310903_10805614	Not Available	514	Open in IMG/M
3300032003\|Ga0310897_10052570	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300032017\|Ga0310899_10003537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4142	Open in IMG/M
3300032017\|Ga0310899_10282863	Not Available	764	Open in IMG/M
3300032122\|Ga0310895_10021361	All Organisms → cellular organisms → Bacteria → Proteobacteria	2097	Open in IMG/M
3300032144\|Ga0315910_10172527	Not Available	1616	Open in IMG/M
3300032174\|Ga0307470_10546653	Not Available	855	Open in IMG/M
3300032180\|Ga0307471_100596600	Not Available	1263	Open in IMG/M
3300032205\|Ga0307472_100758478	Not Available	881	Open in IMG/M
3300032205\|Ga0307472_100804237	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300032211\|Ga0310896_10113354	Not Available	1233	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.31%
Host-Associated	Host-Associated	31.73%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.46%
Plants	Host-Associated → Plants	31.73%
Aquatic	Environmental → Aquatic	3.85%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.38%
Marine	Environmental → Aquatic → Marine	3.85%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Sand	Environmental → Terrestrial → Soil → Sand	2.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.92%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300002820	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026714	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A1a-12 (SPAdes)	Environmental	Open in IMG/M
3300026731	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4-10 (SPAdes)	Environmental	Open in IMG/M
3300026826	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2-10 (SPAdes)	Environmental	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300026976	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027434	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-11 (SPAdes)	Environmental	Open in IMG/M
3300027475	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06.2A5a-11 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_00307140	2170459020	Switchgrass, Maize And Mischanthus Litter	MENEKYGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGL
ARcpr5oldR_00006317	3300000041	Arabidopsis Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
JGI24747J21853_10079272	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MENEKSSKDKKPDXRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG*
JGI25490J38602_101491	3300002820	Soil	KSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0055435_100729152	3300003994	Natural And Restored Wetlands	MGNEKSGKDIKSDSRSQRLAAELRENLRRRKTQVRGRKAPAAGEGAKRPGLPPRGG*
Ga0055433_100138002	3300004025	Natural And Restored Wetlands	DNGAAMGNEKSGKDIKSDSRSQRLAAELRENLRRRKTQVRGRKAPAAGEGAKRPGLPPRGG*
Ga0062593_1022942482	3300004114	Soil	MPPAMHNEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPPTGEGTKRCLLPRGD*
Ga0062589_1006321202	3300004156	Soil	MENEKSGKDRKPDSRSQRLAAELRENLRRRKAQERGRKAPATGEGAKRPGLPPRGG*
Ga0062589_1020477961	3300004156	Soil	MENEKSSKDKKPDSHSQRLAAELRENLRRRKAQERGRKAPAASDSTKRPGLPPRGG*
Ga0062594_1003851742	3300005093	Soil	MENEKSGKDKKPDSRGQRLAAELRENLRRRKTQERGRKAPAAGEGTKRPGLPPRGG*
Ga0066809_100230081	3300005168	Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG*
Ga0065712_100928983	3300005290	Miscanthus Rhizosphere	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG*
Ga0070676_104338742	3300005328	Miscanthus Rhizosphere	MENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG*
Ga0066388_1024765651	3300005332	Tropical Forest Soil	MENEKSGKEQKPDSRSQRLAAELRENLRRRKAQERGRKAPVTGNDAAKRPGLPPRRG*
Ga0068869_1011641771	3300005334	Miscanthus Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRP
Ga0070682_1002111373	3300005337	Corn Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGREAPAAGEGTKRPGLPPRGG*
Ga0068868_1011308582	3300005338	Miscanthus Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKR
Ga0070678_1019083821	3300005456	Miscanthus Rhizosphere	MENEKPGKDKKPNSRNQRLAAELRENLRRRKAQDRGRKAPGAGEGAKRPGLPPRGG*
Ga0070662_1003030501	3300005457	Corn Rhizosphere	MENEKSGKDKKPDSRGQRLAAELRENLRRRKTQERGRKAPAAGEGTKRPGLP
Ga0070685_107712823	3300005466	Switchgrass Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEG
Ga0070684_1019544752	3300005535	Corn Rhizosphere	MENEKPGKDKKPNSRNQRLAAELRENLRRRKAQDRGRKAPGAGEGAKRPGLPPRGD*
Ga0070702_1012738132	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GQADNATAMENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0068859_1013937601	3300005617	Switchgrass Rhizosphere	ADNAAAMENEKSGKDRKPDSRSQRLAAELRENLRRRKAQERGRKAPATGEGAKRPGLPPRGG*
Ga0066905_1004183151	3300005713	Tropical Forest Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPGVPPRGG*
Ga0074055_100148183	3300006573	Soil	MENEKSGKDRKIDSRSQRLAAELRENLRRRKAQERGRKGPAAGEGTKRPGLPPRSG*
Ga0074049_130813311	3300006580	Soil	SSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG*
Ga0075425_1010462752	3300006854	Populus Rhizosphere	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPATGEGTKRRGLPPRGG*
Ga0075424_1006242401	3300006904	Populus Rhizosphere	MENEKSGTDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0105240_123183851	3300009093	Corn Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPP
Ga0111539_104434722	3300009094	Populus Rhizosphere	MMSDQKSGQDKKANSRSQRLAVELRENLRRRKAQERGRKAPATDAGTKRPGLPPRDG*
Ga0114129_124205811	3300009147	Populus Rhizosphere	MMSDQKSGQDKKANSRSQRLAVELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0111538_100407176	3300009156	Populus Rhizosphere	MSDQKSGQDKKANSRSQRLAVELRENLRRRKAQERGRKAPATDAGTKRPGLPPRDG*
Ga0126384_125007561	3300010046	Tropical Forest Soil	MGNEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPSLPPRGG*
Ga0126377_103956641	3300010362	Tropical Forest Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG*
Ga0134125_118554971	3300010371	Terrestrial Soil	MENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESTKRPGLPPRGG*
Ga0134127_108915523	3300010399	Terrestrial Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKVQERGRKAPATSQGTKRPAFPPRGG*
Ga0157351_10265863	3300012501	Unplanted Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKTQERGRKAPAAGEGTKRPGLPPRGG*
Ga0157303_1000018110	3300012896	Soil	MENEKSSKDKKPDSHSQRLAAELRENLRRRKAQERGRKAPAASDST
Ga0157285_100141722	3300012897	Soil	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGEGTKQPALPPRGG*
Ga0157285_101405112	3300012897	Soil	MENEKSGKDKKPDSRGQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0157286_100854992	3300012908	Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0157306_100745702	3300012912	Soil	ENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG*
Ga0126375_102907472	3300012948	Tropical Forest Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPSVPPRGG*
Ga0164299_112205721	3300012958	Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRSGLPPRGG*
Ga0157369_126670681	3300013105	Corn Rhizosphere	MENEKSSKDKKPDNRGQRLAAELRENLRRRKTQERGRKAPAAGESSKRPGLPPRGG*
Ga0163162_116661022	3300013306	Switchgrass Rhizosphere	AAMENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG*
Ga0157375_101332431	3300013308	Miscanthus Rhizosphere	KKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG*
Ga0075301_11315861	3300014262	Natural And Restored Wetlands	MGNEKSGKDIKSDSRSQRLAAELRENLRRRKTQVRGRKAPAAGEGAKRRGLPPRGG*
Ga0075354_10699452	3300014308	Natural And Restored Wetlands	NAAAMGNEKSGKDRKSDSRSQRLAAELRENLRRRKTQERGRKAPAAGEGAKRPGLPPRGG
Ga0075351_10046663	3300014318	Natural And Restored Wetlands	MGNEKSGKDRKSDSRSQRLAAELRENLRRRKTQERGRKAPAAGEGAKRPGLPPRGG*
Ga0132258_103628028	3300015371	Arabidopsis Rhizosphere	MENEKFSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG*
Ga0132256_1029684601	3300015372	Arabidopsis Rhizosphere	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERSRKAPAAGEGAKRPGLPSRGG*
Ga0132256_1033312111	3300015372	Arabidopsis Rhizosphere	MENEKSSKDKKPDSRSQRLAAELRENLHRRKAQERGRKAPAAGEGTKRPGLPPRGG*
Ga0132255_1058602491	3300015374	Arabidopsis Rhizosphere	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERSRKAPAAGEGAKRPGLPPRGD*
Ga0187785_101804952	3300017947	Tropical Peatland	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPVTGNGAAKRPRLPPRGG
Ga0173481_100018992	3300019356	Soil	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0173481_100059632	3300019356	Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0173482_100043552	3300019361	Soil	MENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0173482_100055781	3300019361	Soil	KDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0173482_103112432	3300019361	Soil	MENEKSSKDKKPNSRGQRLAAELRENLRRRKAQERGRKAPAAGEGTKQPALPPRGG
Ga0173482_105529052	3300019361	Soil	MENEKSSKDKKPDSHSQRLAAELRENLRRRKAQERGRKAPAASDSTKRPGLPPRGG
Ga0247751_10084711	3300023069	Soil	KSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0247799_10017351	3300023072	Soil	MENEKSGKDRKIDSRSQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0210131_10457782	3300025551	Natural And Restored Wetlands	MGNEKSGKDIKSDSRSQRLAAELRENLRRRKTQVRGRKAPAAGEGAKRPGLPPRGG
Ga0207655_11176911	3300025728	Miscanthus Rhizosphere	MENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGL
Ga0207707_100787524	3300025912	Corn Rhizosphere	AAAMENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0207660_101099393	3300025917	Corn Rhizosphere	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPR
Ga0207657_104325503	3300025919	Corn Rhizosphere	MENEKSGKDKKPDSRGQRLAAELRENLRRRKTQERGRKAPAAGEGTKRPGLPPRGG
Ga0207650_109210602	3300025925	Switchgrass Rhizosphere	MENEKSGKDRKPDSRSQRLAAELRENLRRRKAQERGRKAPATGEGAKRPGLPPRGG
Ga0207690_100420691	3300025932	Corn Rhizosphere	DKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0210117_10191083	3300025985	Natural And Restored Wetlands	MGNEKSGKDRKSDSRSQRLAAELRENLRRRKTQERGRKAPAAGEGAKRPGLPPRGG
Ga0207677_100214871	3300026023	Miscanthus Rhizosphere	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRG
Ga0207639_111646651	3300026041	Corn Rhizosphere	ENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0207676_100064371	3300026095	Switchgrass Rhizosphere	NEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0207567_1015281	3300026714	Soil	AMENEKSGKDRKPDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0207523_1016731	3300026731	Soil	NEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0207517_10027381	3300026826	Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPEAGEGTKRPGLPPRGG
Ga0207582_10078101	3300026960	Soil	RMENEKSSKDKKPDSHSQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0207525_1080841	3300026976	Soil	KKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0209996_10603542	3300027395	Arabidopsis Thaliana Rhizosphere	MENEKSSKDRKPDSRSQRLVAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0207565_1009431	3300027434	Soil	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPR
Ga0207607_1035872	3300027475	Soil	NATAMENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPGLPPRGG
Ga0207981_10146332	3300027560	Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG
Ga0209983_10246821	3300027665	Arabidopsis Thaliana Rhizosphere	KDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0209998_100945062	3300027717	Arabidopsis Thaliana Rhizosphere	MENEKSSKDRKPDSRSQRLVAELRENLRRRKAQERGRKAPAAGEGTKRPAFPPRGG
Ga0207428_100341385	3300027907	Populus Rhizosphere	KKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
(restricted) Ga0255311_10009802	3300031150	Sandy Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPATGEGAKRPVFPPRGG
(restricted) Ga0255310_100048604	3300031197	Sandy Soil	MENEKSGTDKKPDSRSERLAAELRENLRRRKAQERGRKAPAAGEGTKRSGLPPCGG
(restricted) Ga0255312_11166402	3300031248	Sandy Soil	EKSGTDKKPDSRSERLAAELRENLRRRKAQERGRKAPAAGEGTKRSGLPPCGG
Ga0310887_104624532	3300031547	Soil	MENEKSSKDKKPDSRSQRLAAELHENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG
Ga0307469_119240341	3300031720	Hardwood Forest Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPGLPPRGG
Ga0307468_1000077175	3300031740	Hardwood Forest Soil	MTNQKSGKDKKADNRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPGLPPRSG
Ga0310901_105010221	3300031940	Soil	AMENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRGG
Ga0310903_108056141	3300032000	Soil	KKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG
Ga0310897_100525701	3300032003	Soil	MENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGLPPRG
Ga0310899_100035371	3300032017	Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGTKRPG
Ga0310899_102828632	3300032017	Soil	MENEKSSKDKKPDNRGQRLAAELRENLRRRKAQERGRKAPAAGESSKRPGL
Ga0310895_100213613	3300032122	Soil	MENEKSGKDKKSDSRSQRLAAELRENLRRRKAQVRGRKAPAAGEGAKRPGLPPRGG
Ga0315910_101725273	3300032144	Soil	MENEKSSKDRKPDSRSQRLVAELRENLRRRKAQERGRKAPATGEGTKRPAFPPRGG
Ga0307470_105466531	3300032174	Hardwood Forest Soil	AMENEKSSKDKKPDSRGQRLAAELRENLRRRKAQERGRKAPAAGESPKRPGLPPRGG
Ga0307471_1005966002	3300032180	Hardwood Forest Soil	MTNQKSGKDKKADNRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPGLPPRGG
Ga0307472_1007584782	3300032205	Hardwood Forest Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPSLPPRGG
Ga0307472_1008042371	3300032205	Hardwood Forest Soil	MENEKSSKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAGEGTKRPGLPPRSG
Ga0310896_101133542	3300032211	Soil	MENEKSGKDKKPDSRSQRLAAELRENLRRRKAQERGRKAPAAGEGTKRPGLPPRGG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters