Metagenome / Metatranscriptome Family F097382

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097382
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	98 residues
Representative Sequence	MKKVVSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMW
Number of Associated Samples	50
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.00 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.231 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (96.154 % of family members)
Environment Ontology (ENVO)	Unclassified (96.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 67.21% β-sheet: 0.00% Coil/Unstructured: 32.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01588	tRNA_bind	8.65
PF09334	tRNA-synt_1g	4.81
PF13450	NAD_binding_8	3.85
PF05199	GMC_oxred_C	2.88
PF08241	Methyltransf_11	2.88
PF01370	Epimerase	2.88
PF08264	Anticodon_1	1.92
PF02348	CTP_transf_3	1.92
PF00535	Glycos_transf_2	1.92
PF00685	Sulfotransfer_1	1.92
PF13091	PLDc_2	0.96
PF13489	Methyltransf_23	0.96
PF10609	ParA	0.96
PF13578	Methyltransf_24	0.96
PF07103	DUF1365	0.96
PF14072	DndB	0.96
PF01041	DegT_DnrJ_EryC1	0.96
PF11959	DUF3473	0.96
PF16363	GDP_Man_Dehyd	0.96
PF02522	Antibiotic_NAT	0.96
PF07021	MetW	0.96
PF13245	AAA_19	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0073	tRNA-binding EMAP/Myf domain	Translation, ribosomal structure and biogenesis [J]	8.65
COG2517	Predicted RNA-binding protein, contains C-terminal EMAP domain	General function prediction only [R]	8.65
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.81
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	2.88
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	1.92
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.96
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.96
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.96
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.96
COG2746	Aminoglycoside N3'-acetyltransferase	Defense mechanisms [V]	0.96
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.96
COG3496	Uncharacterized conserved protein, DUF1365 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
All Organisms	root	All Organisms	30.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
cellular organisms	root	All Organisms → cellular organisms	30.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.81 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.58 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.92 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.81 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	1.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	1.92 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	1.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.92 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.96 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	1.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.92 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	0.96 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.96 %
Piscirickettsiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae	0.96 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	1.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.92 %
Candidatus Methylopumilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	0.96 %
Candidatus Thioglobus autotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → Candidatus Thioglobus autotrophicus	0.96 %
unclassified Piscirickettsiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → unclassified Piscirickettsiaceae	0.96 %
Thiomargarita	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	1.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.92 %
Piscirickettsiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → unclassified Piscirickettsiaceae → Piscirickettsiaceae bacterium	0.96 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	0.96 %
Candidatus Methylopumilus universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	0.96 %
Candidatus Thioglobus autotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → Candidatus Thioglobus autotrophicus	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006027\|Ga0075462_10188894	Not Available	622	Open in IMG/M
3300006404\|Ga0075515_10928503	Not Available	580	Open in IMG/M
3300010299\|Ga0129342_1306224	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300016735\|Ga0182074_1552533	Not Available	581	Open in IMG/M
3300016741\|Ga0182079_1184795	Not Available	761	Open in IMG/M
3300016747\|Ga0182078_10471087	Not Available	917	Open in IMG/M
3300016762\|Ga0182084_1060317	Not Available	505	Open in IMG/M
3300017818\|Ga0181565_10082979	All Organisms → cellular organisms → Bacteria → Proteobacteria	2283	Open in IMG/M
3300017818\|Ga0181565_10119884	Not Available	1853	Open in IMG/M
3300017818\|Ga0181565_10379912	Not Available	935	Open in IMG/M
3300017818\|Ga0181565_10589588	Not Available	714	Open in IMG/M
3300017818\|Ga0181565_10906778	Not Available	549	Open in IMG/M
3300017951\|Ga0181577_10934848	Not Available	515	Open in IMG/M
3300017952\|Ga0181583_10111587	All Organisms → cellular organisms → Bacteria → FCB group	1860	Open in IMG/M
3300017952\|Ga0181583_10239976	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300017956\|Ga0181580_10371592	Not Available	958	Open in IMG/M
3300017956\|Ga0181580_10552658	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	747	Open in IMG/M
3300017956\|Ga0181580_10794946	Not Available	596	Open in IMG/M
3300017956\|Ga0181580_10855354	Not Available	570	Open in IMG/M
3300017957\|Ga0181571_10114938	All Organisms → cellular organisms → Bacteria → Proteobacteria	1800	Open in IMG/M
3300017957\|Ga0181571_10489924	Not Available	752	Open in IMG/M
3300017962\|Ga0181581_10106602	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
3300017962\|Ga0181581_10209259	Not Available	1286	Open in IMG/M
3300017962\|Ga0181581_10587961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	679	Open in IMG/M
3300017985\|Ga0181576_10296876	Not Available	1030	Open in IMG/M
3300017985\|Ga0181576_10323275	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300017985\|Ga0181576_10372744	Not Available	895	Open in IMG/M
3300017985\|Ga0181576_10489526	Not Available	757	Open in IMG/M
3300017986\|Ga0181569_10066791	All Organisms → cellular organisms → Bacteria → Proteobacteria	2570	Open in IMG/M
3300017986\|Ga0181569_10069003	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300017986\|Ga0181569_10093088	Not Available	2149	Open in IMG/M
3300017986\|Ga0181569_10375778	Not Available	975	Open in IMG/M
3300017986\|Ga0181569_10748600	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300017986\|Ga0181569_11044106	Not Available	526	Open in IMG/M
3300017986\|Ga0181569_11122413	Not Available	501	Open in IMG/M
3300018036\|Ga0181600_10545511	Not Available	546	Open in IMG/M
3300018049\|Ga0181572_10058547	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300018049\|Ga0181572_10105714	Not Available	1856	Open in IMG/M
3300018049\|Ga0181572_10544578	Not Available	710	Open in IMG/M
3300018049\|Ga0181572_10669966	Not Available	626	Open in IMG/M
3300018049\|Ga0181572_10744168	Not Available	587	Open in IMG/M
3300018049\|Ga0181572_10925378	Not Available	514	Open in IMG/M
3300018418\|Ga0181567_10230045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	1262	Open in IMG/M
3300018418\|Ga0181567_11019746	Not Available	516	Open in IMG/M
3300018421\|Ga0181592_10093660	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	2342	Open in IMG/M
3300018421\|Ga0181592_10308154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → unclassified Piscirickettsiaceae → Piscirickettsiaceae bacterium	1143	Open in IMG/M
3300018421\|Ga0181592_11050173	Not Available	523	Open in IMG/M
3300018424\|Ga0181591_10322991	Not Available	1170	Open in IMG/M
3300018424\|Ga0181591_10808030	Not Available	651	Open in IMG/M
3300018426\|Ga0181566_10569985	Not Available	789	Open in IMG/M
3300018428\|Ga0181568_11107548	Not Available	598	Open in IMG/M
3300018876\|Ga0181564_10412042	Not Available	734	Open in IMG/M
3300019262\|Ga0182066_1076660	Not Available	532	Open in IMG/M
3300019266\|Ga0182061_1602789	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300019271\|Ga0182065_1101830	Not Available	504	Open in IMG/M
3300019272\|Ga0182059_1489632	Not Available	1068	Open in IMG/M
3300019276\|Ga0182067_1200095	Not Available	721	Open in IMG/M
3300019281\|Ga0182077_1208839	Not Available	1015	Open in IMG/M
3300019283\|Ga0182058_1523903	Not Available	504	Open in IMG/M
3300020056\|Ga0181574_10139085	Not Available	1615	Open in IMG/M
3300020189\|Ga0181578_10344595	Not Available	670	Open in IMG/M
3300020194\|Ga0181597_10482070	Not Available	501	Open in IMG/M
3300020207\|Ga0181570_10295210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	814	Open in IMG/M
3300020207\|Ga0181570_10401988	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300020207\|Ga0181570_10513887	Not Available	547	Open in IMG/M
3300020207\|Ga0181570_10568294	Not Available	507	Open in IMG/M
3300021368\|Ga0213860_10444499	Not Available	558	Open in IMG/M
3300022934\|Ga0255781_10108138	Not Available	1504	Open in IMG/M
3300022935\|Ga0255780_10287739	Not Available	787	Open in IMG/M
3300022937\|Ga0255770_10090112	Not Available	1781	Open in IMG/M
3300022939\|Ga0255754_10149879	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1220	Open in IMG/M
3300022939\|Ga0255754_10172386	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300023081\|Ga0255764_10028299	Not Available	3692	Open in IMG/M
3300023081\|Ga0255764_10364193	Not Available	638	Open in IMG/M
3300023084\|Ga0255778_10056624	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	2423	Open in IMG/M
3300023105\|Ga0255782_10451827	Not Available	561	Open in IMG/M
3300023108\|Ga0255784_10065967	Not Available	2134	Open in IMG/M
3300023108\|Ga0255784_10130537	Not Available	1392	Open in IMG/M
3300023108\|Ga0255784_10223048	Not Available	980	Open in IMG/M
3300023110\|Ga0255743_10021605	All Organisms → cellular organisms → Bacteria	4314	Open in IMG/M
3300023110\|Ga0255743_10469519	Not Available	603	Open in IMG/M
3300023115\|Ga0255760_10218627	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300023117\|Ga0255757_10122929	Not Available	1505	Open in IMG/M
3300023117\|Ga0255757_10238312	Not Available	931	Open in IMG/M
3300023117\|Ga0255757_10485814	Not Available	542	Open in IMG/M
3300023119\|Ga0255762_10020545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → Candidatus Thioglobus autotrophicus	4417	Open in IMG/M
3300023119\|Ga0255762_10045184	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300023119\|Ga0255762_10101316	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300023119\|Ga0255762_10169065	Not Available	1238	Open in IMG/M
3300023119\|Ga0255762_10396456	Not Available	681	Open in IMG/M
3300023119\|Ga0255762_10441232	Not Available	629	Open in IMG/M
3300023119\|Ga0255762_10478133	Not Available	591	Open in IMG/M
3300023119\|Ga0255762_10512930	Not Available	560	Open in IMG/M
3300023119\|Ga0255762_10549860	Not Available	530	Open in IMG/M
3300023175\|Ga0255777_10041429	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300023175\|Ga0255777_10093978	Not Available	1943	Open in IMG/M
3300023175\|Ga0255777_10172084	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300023175\|Ga0255777_10202816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1188	Open in IMG/M
3300023176\|Ga0255772_10035969	All Organisms → cellular organisms → Bacteria	3621	Open in IMG/M
3300023176\|Ga0255772_10082332	All Organisms → cellular organisms → Archaea	2086	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	96.15%
Coastal	Environmental → Aquatic → Marine → Coastal	3.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	96.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	96.15%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.92%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.96%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006404	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300016735	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071406BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016741	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016762	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019262	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019266	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019271	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101411XT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019272	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019276	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019277	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019281	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075462_101888941	3300006027	Aqueous	MNKVIYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQK
Ga0075515_109285033	3300006404	Aqueous	LLSTNAISQNSRPMADGLSSCAGTYRFAQEIYRNANNDERVKIFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKNI*
Ga0129342_13062241	3300010299	Freshwater To Marine Saline Gradient	MNKVVYLVLFFISTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENN
Ga0182074_15525331	3300016735	Salt Marsh	RPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKNI
Ga0182079_11847951	3300016741	Salt Marsh	MKFLVHVFFLFLSTKVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQNISSQYLSAAEASYFLLQDKTISPRKLAEDNMKKTFDMWNP
Ga0182078_104710873	3300016747	Salt Marsh	VILANSNSENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKNI
Ga0182084_10603173	3300016762	Salt Marsh	PLADGLSSCAGTYMFAQEIYKNANNDERVIMFQNLTSQYLSAAEASYFFLKDESILPRKVAENNMQKNVQYVDPKI
Ga0181565_100829792	3300017818	Salt Marsh	MKLLNYLFFFFFSTSVISENSRPLADGLSSCAGTYMFAEEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQD
Ga0181565_101198844	3300017818	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENN
Ga0181565_103799122	3300017818	Salt Marsh	MNRFVSLVVLFLSTYVISENSRPMADGLSSCAGTYMFAQEIYRNANNYERVKMFKDLSSQYLSAAEASYFLLKDESISPRKIAEN
Ga0181565_105895882	3300017818	Salt Marsh	MKFFVHILFLFLSTRVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQNISSQYLSAAEASYFLLQDKTISPRKLAEDNMKKTFDMWNPRFKHLMTE
Ga0181565_109067781	3300017818	Salt Marsh	MKKLAYLFFLFFSTHVISENSRPMADGLSSCAGTYMFAQEIYRNANSDERVQMFQDLSSQYLSAAEASYFLLRDESISPRKIA
Ga0181577_109348481	3300017951	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMW
Ga0181583_101115872	3300017952	Salt Marsh	MKKLVYLFLLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQETFNMWIPRFKQLMTEEGRQ
Ga0181583_102399762	3300017952	Salt Marsh	MNKFLFLFFLILSTYVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVIMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQ
Ga0181580_103715923	3300017956	Salt Marsh	MKKILSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQELSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQLMTE
Ga0181580_105526582	3300017956	Salt Marsh	MADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQ
Ga0181580_107949462	3300017956	Salt Marsh	MFKYLYTLLTFIFSSYSHAYYSNSIEMASGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSTQYLSAAEASFFLLKDESIPPRKFAENNMQKTFNMWIPRFKQLMTEEGRQD
Ga0181580_108553541	3300017956	Salt Marsh	VNKVFYTVFLFLSANAISENSRPMADGLSSCAGTYMFAQEIYRNANNNERVKMFQDLSSQYLSAAEASYFLLRDESISPRKTAENNMQETFNMWIPRFKQL
Ga0181571_101149383	3300017957	Salt Marsh	MKKVVSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMW
Ga0181571_104899241	3300017957	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLLKDLLEDIKLCAIIDKSGK
Ga0181581_101066022	3300017962	Salt Marsh	MKLLNYLFFFFFSTSVISENSRPLADGLSSCAGTYMFAEEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDEPISPRKIAENNMQKTYN
Ga0181581_102092593	3300017962	Salt Marsh	VNKVFYTVFLFLSANAISENSRPMADGLSSCAGTYMFAQEIYRNANNNERVKMFQDLSSQYLSAAEASYFLLRDESISPRKTAENNMQETFNMWIPRFK
Ga0181581_105879611	3300017962	Salt Marsh	MKKIATLVFLFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDK
Ga0181576_102968762	3300017985	Salt Marsh	MKNLPYIFVLFLSSEVFSENSRPLADGLSSCAGTYMFAKEIYRNANNDERVKMFQVLSSQYLSAAEASYFLLKDESISPRKVAENNMQKTFNMWIPRFKQLMTEEGRQ
Ga0181576_103232753	3300017985	Salt Marsh	MKYLVTVTFFFYSFSALSENSRSMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQETFNMW
Ga0181576_103727442	3300017985	Salt Marsh	MNKVASIVFLFLSTNAISDNLRSMADGLSSCAGTYMFAQEIYKNANNYERVKMFQDFSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDKGAN
Ga0181576_104895261	3300017985	Salt Marsh	MKKLAYLFFLFFSTHVISENSRPIADGLSSCAGTYMFAQEIYRNANSDERVQMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTYNMWIPRFKQ
Ga0181569_100667911	3300017986	Salt Marsh	MKLLNYLFFFFFSTSVISENSRPLADGLSSCAGTYMFAEEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDEPISPRKIAENNMQKTYNMWIPRFKQ
Ga0181569_100690031	3300017986	Salt Marsh	MKYLVTVTFFFYSFSALSENSRSMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFFLKDESISPRKIAENNMQKTF
Ga0181569_100930884	3300017986	Salt Marsh	MRFFYLIIFVLISYNASSSNSRAMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQNTFNLW
Ga0181569_101470053	3300017986	Salt Marsh	MRFMKLLSFVFFAGISFIAFSENSRPIADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFN
Ga0181569_103757783	3300017986	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFN
Ga0181569_107486001	3300017986	Salt Marsh	MKKVVSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQ
Ga0181569_110441061	3300017986	Salt Marsh	MKLFIYLIIFLSVKTFAENSRPLADGLSSCAGTFMFAEEIYRNANNDERVKMFQDLSSQYLSASEASYFLLKEESISPRKFAENNMQKTFNMWIPRFKQLMTEEGRQDKGANNILLKDLLEDIKL
Ga0181569_111224132	3300017986	Salt Marsh	MKKVISFVFFFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDKGAN
Ga0181600_105455111	3300018036	Salt Marsh	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMW
Ga0181572_100585471	3300018049	Salt Marsh	MKLLNYLFFFFFSTSVISENSRPLADGLSSCAGTYMFAEEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQLMTEEG
Ga0181572_101057141	3300018049	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNM
Ga0181572_105445782	3300018049	Salt Marsh	MKLFIYLIIFLTVKTFAENSRPLADGLSSCAGTFMFAEEIYRNANNDVRVKMFQDLSSQYLSAAEASYFLLKEESISPRMIAENNMQKTFNMWIPRFKQLMTE
Ga0181572_106699662	3300018049	Salt Marsh	MADGLSSCAGTYLFAEEIYKNANNDERVKMFQNLSSQYLSAAEASYFFLKVEPLSPRKIAESNMQKTFNMWIPRFKQLMTEE
Ga0181572_107441681	3300018049	Salt Marsh	MKKLAYIFFLFSSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLL
Ga0181572_109253781	3300018049	Salt Marsh	MKKILSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQELSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPR
Ga0181567_102300451	3300018418	Salt Marsh	MYKLASLVFLFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDGSISPRKIAENNMQKTYNMWIPRFKQLMTEE
Ga0181567_110197461	3300018418	Salt Marsh	MKNLPYIFVLFLSSEVFSENSRPLADGLSSCAGTYMFAKEIYRNANNDERVKMFQVLSSQYLSAAEASYFLLKDESTSPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDKGANNTLLKDL
Ga0181592_100936604	3300018421	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLL
Ga0181592_103081541	3300018421	Salt Marsh	MKLLYIISLTFFSHSVFSENSRSMADGLSSCAGTYMFAQEIYRNASNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQK
Ga0181592_110501731	3300018421	Salt Marsh	MKFLFTIFALTLSLNSFSENSRPLADGLSSCAGTYMFAQEIYRNANNDERAKMFQGLSSQYLSAAEASYFLLKDESISPRKFAENNMQKTFNMWSPRFKQLMTEEGRQDKRANN
Ga0181591_103229911	3300018424	Salt Marsh	MRKIIILNLALIISAKIFAELLNSKPMAEGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLNDESISPRKIAENNMQKTFNMW
Ga0181591_108080302	3300018424	Salt Marsh	MNKLASIIFLFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFFLKDESISPRKIAENNMQKTFNMWNPRFKQLMTEKGRQDKAANN
Ga0181566_100853224	3300018426	Salt Marsh	MKFFIYLFFLVFNFNAISESSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSASEASYFFLKDESISPRKIAEKNMQRTFNMWIPRFKQLMTEKGR
Ga0181566_105699851	3300018426	Salt Marsh	MNKVASIVFLFLSTNAISDNLRSMADGLSSCAGTYMFAQEIYKNANNYERVKMFQDFSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWIPRFKQLMTEE
Ga0181568_111075482	3300018428	Salt Marsh	MKLFIYLIIFLSVKTFAENSRPLADGLSSCAGTFMFAEEIYRNANNDVRVKMFQDLSSQYLSAAEASYFLLKEESISPRMIAENNMQKTFNMWIPRFKQLM
Ga0181564_104120421	3300018876	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDES
Ga0182066_10766601	3300019262	Salt Marsh	MKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSLYLSAAEASYFLLKDESISPRKIAENNMQKTFN
Ga0182061_16027892	3300019266	Salt Marsh	MKFLVHVFFLFLSTKVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLNDESISPRKFAENNMQKTFSMWIPRFKQLMTEEGRQDKGA
Ga0182065_11018301	3300019271	Salt Marsh	MKKVVSFVFIFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMWS
Ga0182059_14896321	3300019272	Salt Marsh	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMWSPRFKQLMTEE
Ga0182067_12000953	3300019276	Salt Marsh	MYRLIYLAILLLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPR
Ga0182081_15925203	3300019277	Salt Marsh	MNKLAPIIFLFLSTNVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESIT
Ga0182077_12088393	3300019281	Salt Marsh	MTMKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVRMFQDLSSQYLSAAEASYFLLRDESISPRKIA
Ga0182058_15239032	3300019283	Salt Marsh	LCKVAKMNRFAYLVFFFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKTAENNMQETFNMWIPRFKQLMTEEGRQD
Ga0181574_101390853	3300020056	Salt Marsh	MNMKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSLYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDK
Ga0181578_103445951	3300020189	Salt Marsh	MNKFASLIFLFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFFLKDESISPRKIAENNMQKTFNMW
Ga0181597_104820702	3300020194	Salt Marsh	MYRLIYLAILLLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNM
Ga0181570_102952101	3300020207	Salt Marsh	MNRFAYLVFVFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKVAENNMQ
Ga0181570_104019882	3300020207	Salt Marsh	MKYLVTVTFFFYSFSALSENSRSMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDES
Ga0181570_105138871	3300020207	Salt Marsh	MKFLVHVFFLFLSTKVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLNDESISPRKAAENIMQKTFN
Ga0181570_105682941	3300020207	Salt Marsh	MNKVVYLVFLFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMWSPRFKQLMTEEGRQ
Ga0213860_104444991	3300021368	Seawater	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMW
Ga0255781_101081381	3300022934	Salt Marsh	MNMKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSLYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQLMTEE
Ga0255780_102877391	3300022935	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKR
Ga0255770_100901121	3300022937	Salt Marsh	MKKLVYLFLLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAEYNMQKTFNMWIPRFKQLMTEEGRQDK
Ga0255754_101498791	3300022939	Salt Marsh	MADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFFLKEGPISPRKIAENN
Ga0255754_101723861	3300022939	Salt Marsh	MKVFAYLFFLFLSSNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFEDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWIP
Ga0255764_100282991	3300023081	Salt Marsh	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMWSPRFKQLMTEEGRQ
Ga0255764_103641933	3300023081	Salt Marsh	MYKVVSLFFLFLSTNAISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDKGA
Ga0255778_100566241	3300023084	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLLKDLLEDIKLCAIIDKSGKK
Ga0255782_104518272	3300023105	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMW
Ga0255784_100659671	3300023108	Salt Marsh	MRFFYLIIFVLISYNASSSNSRAMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQNT
Ga0255784_101305371	3300023108	Salt Marsh	LCKVVKMNRFAYLVFFFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKVAENNMQKTFNMWIPRF
Ga0255784_102230483	3300023108	Salt Marsh	MKKVVSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESI
Ga0255743_100216051	3300023110	Salt Marsh	MNRFAYLVFVFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKVAE
Ga0255743_104648492	3300023110	Salt Marsh	MLLKIFVFSIYFFSVSISAYPENSKALSDGLSSCAGTYKFAQEIYRNANNDERVKIFQDLSLQYLSAAEASYFLLKDESITP
Ga0255743_104695191	3300023110	Salt Marsh	MKKLAYIFFLFSSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLLKDLLEDIKLCAIIDKSGKK
Ga0255760_102186271	3300023115	Salt Marsh	MVKFFAVVLLFLSSQVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKVFQDLSSQYISAAEAGYFFLQDKSILPRKVAENNMQKTFNIWSPRFKQLMTEEGRKD
Ga0255757_101229291	3300023117	Salt Marsh	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKTFNMWSPRFKQLMTE
Ga0255757_102383122	3300023117	Salt Marsh	MKKLAYTFFLFFSTSVISENSRPMADGLSSCAGTYMFAQEIYKNANNDERVKMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTFNMWVPRFKQLMTEEGRQDKRANNTLLKDLLEDIKLC
Ga0255757_104858141	3300023117	Salt Marsh	MNMKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSLYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPRFKQLMTEEGRQDKGANNTLLKDLLEDIKLCAII
Ga0255762_100205456	3300023119	Salt Marsh	MNKVASLVFLFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRK
Ga0255762_100451843	3300023119	Salt Marsh	MKKILSFVFLFLSTNVIAENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQELSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWI
Ga0255762_101013161	3300023119	Salt Marsh	MKFLVHVFFLFLSTKVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLNDESISPRKAAENNMQKTFNMWIPRFKQLMTEEGRQDKGANNTLL
Ga0255762_101690653	3300023119	Salt Marsh	MNMKRFISLVILFLSANVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLRDES
Ga0255762_103964561	3300023119	Salt Marsh	MNRFVSLVVLFLSTYVISENSRPMADGLSSCAGTYMFAQEIYRNANNYERVKMFKDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNM
Ga0255762_104412322	3300023119	Salt Marsh	MKFFVHILFLFLSTRVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQNISSQYLSAAEASYFLLQDKTISPRKLAEDNM
Ga0255762_104781332	3300023119	Salt Marsh	MNKAVSLIFIFLSTNVISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENN
Ga0255762_105129302	3300023119	Salt Marsh	MKYLVTVTFFFYSFSALSENSRSMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLKDESISPRKIAENNMQKTFNMWIPR
Ga0255762_105498601	3300023119	Salt Marsh	MKKLAYLFFLFFSTHVISENSRPMADGLSSCAGTYMFAQEIYRNANSDERVQMFQDLSSQYLSAAEASYFLLRDESISPRKIAENNMQKTYNMWIPRFKQ
Ga0255777_100414294	3300023175	Salt Marsh	MKFLVHVFFLFLSTKVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLNDESISPRKAAENNMQKTFNMWIPRFKQLMTEEGRQDKGANN
Ga0255777_100939782	3300023175	Salt Marsh	MNRFAYLVFFFLSTNAISENSRPMADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKVAENNMQKTFNMWIPRFKQLMTEEGRQDK
Ga0255777_101720841	3300023175	Salt Marsh	MYKVVSLFFLFLSTNAISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKMFQDLSSQYLSAAEASYFLLEDKSISPRKIAENNMQKTFNMWIPRFKQ
Ga0255777_102028161	3300023175	Salt Marsh	MMKFLFTIFALTLSLNSFSENSRPLADGLSSCAGTYMFAQEIYRNANNDERAKMFQGLSSQYLSAAEASYFLLKDESISPRKFAENNMQKTFNMWSPRFKQLMTEEGRQ
Ga0255772_100359695	3300023176	Salt Marsh	MVKFFAVVLLFLSSQVISENSRPLADGLSSCAGTYMFAQEIYRNANNDERVKVFQDLSSQYISAAEAGYFFLQDKSILPRKVAENNMQKTFNMW
Ga0255772_100823324	3300023176	Salt Marsh	MNKVVYLVFFFLSTNVIAENSRPLADGLSSCAGTYMFAQEIYRNANNDERVEMFQDLSSQYLSAAEASYFLLRDESITPRKIAENNMQKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences