Metagenome Family F097417

Basic Information
Family ID	F097417
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	82 residues
Representative Sequence	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.27 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (58.654 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (28.846 % of family members)
Environment Ontology (ENVO)	Unclassified (39.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.10% β-sheet: 53.66% Coil/Unstructured: 40.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03583	LIP	16.35
PF13414	TPR_11	0.96
PF13460	NAD_binding_10	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.62 %
Unclassified	root	N/A	40.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.62 %
Unclassified	root	N/A	40.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.65 %
Unclassified	root	N/A	40.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	14.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	14.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16744737	Not Available	1561	Open in IMG/M
2088090014\|GPIPI_17336537	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
2162886006\|SwRhRL3b_contig_2111486	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
2189573002\|GZIGXIF01BRPWC	Not Available	516	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0502382	Not Available	853	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100744616	Not Available	670	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100745497	Not Available	819	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100747315	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100748927	Not Available	557	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1019710	Not Available	578	Open in IMG/M
3300000787\|JGI11643J11755_11074918	Not Available	616	Open in IMG/M
3300000789\|JGI1027J11758_12720302	Not Available	709	Open in IMG/M
3300004156\|Ga0062589_100516261	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300004156\|Ga0062589_100582891	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300004157\|Ga0062590_101179025	Not Available	745	Open in IMG/M
3300004463\|Ga0063356_101412633	Not Available	1025	Open in IMG/M
3300004480\|Ga0062592_101068745	Not Available	744	Open in IMG/M
3300004643\|Ga0062591_102956449	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005289\|Ga0065704_10007426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2304	Open in IMG/M
3300005290\|Ga0065712_10234372	All Organisms → cellular organisms → Eukaryota	983	Open in IMG/M
3300005332\|Ga0066388_101104279	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005332\|Ga0066388_103507769	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005439\|Ga0070711_101912220	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_100383246	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300005764\|Ga0066903_100997375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1530	Open in IMG/M
3300005764\|Ga0066903_103798732	Not Available	812	Open in IMG/M
3300005764\|Ga0066903_104400070	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005764\|Ga0066903_104755793	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_105641524	Not Available	658	Open in IMG/M
3300005764\|Ga0066903_105671481	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_106727967	Not Available	598	Open in IMG/M
3300006358\|Ga0068871_102026024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300006844\|Ga0075428_101097210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	841	Open in IMG/M
3300006844\|Ga0075428_101465324	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006854\|Ga0075425_101083491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	913	Open in IMG/M
3300006904\|Ga0075424_100541888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300009094\|Ga0111539_10539471	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300009162\|Ga0075423_10300961	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300009162\|Ga0075423_11065874	Not Available	860	Open in IMG/M
3300009792\|Ga0126374_10557665	Not Available	837	Open in IMG/M
3300010043\|Ga0126380_10695060	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300010043\|Ga0126380_10726402	Not Available	802	Open in IMG/M
3300010046\|Ga0126384_10238385	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300010046\|Ga0126384_10339929	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300010047\|Ga0126382_10641070	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300010048\|Ga0126373_10263287	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300010048\|Ga0126373_10819620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	993	Open in IMG/M
3300010359\|Ga0126376_12107787	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300010360\|Ga0126372_10411559	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300010361\|Ga0126378_10642352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1175	Open in IMG/M
3300010361\|Ga0126378_11330461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300010362\|Ga0126377_11160302	Not Available	842	Open in IMG/M
3300010362\|Ga0126377_13291869	Not Available	522	Open in IMG/M
3300010366\|Ga0126379_10605029	Not Available	1182	Open in IMG/M
3300010366\|Ga0126379_11857198	Not Available	706	Open in IMG/M
3300010376\|Ga0126381_100741700	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010376\|Ga0126381_101054119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1174	Open in IMG/M
3300010376\|Ga0126381_102177721	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010376\|Ga0126381_104196680	Not Available	559	Open in IMG/M
3300010398\|Ga0126383_10625205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1150	Open in IMG/M
3300010398\|Ga0126383_12823903	Not Available	567	Open in IMG/M
3300012201\|Ga0137365_10152704	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300012354\|Ga0137366_10854203	Not Available	644	Open in IMG/M
3300012948\|Ga0126375_10748672	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012948\|Ga0126375_10814664	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012948\|Ga0126375_11811511	Not Available	533	Open in IMG/M
3300012955\|Ga0164298_10653721	Not Available	730	Open in IMG/M
3300012961\|Ga0164302_11135142	Not Available	620	Open in IMG/M
3300012971\|Ga0126369_10263784	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300012971\|Ga0126369_10491348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1284	Open in IMG/M
3300014325\|Ga0163163_10000253	All Organisms → cellular organisms → Bacteria	54165	Open in IMG/M
3300015201\|Ga0173478_10662509	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300015372\|Ga0132256_100041672	All Organisms → cellular organisms → Bacteria	4221	Open in IMG/M
3300015373\|Ga0132257_101789610	Not Available	789	Open in IMG/M
3300015374\|Ga0132255_100725811	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300015374\|Ga0132255_105513904	Not Available	535	Open in IMG/M
3300016319\|Ga0182033_10166974	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300016319\|Ga0182033_10749201	Not Available	858	Open in IMG/M
3300016371\|Ga0182034_10501101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1013	Open in IMG/M
3300016387\|Ga0182040_11228177	Not Available	631	Open in IMG/M
3300016404\|Ga0182037_10456243	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300016422\|Ga0182039_10631211	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300021560\|Ga0126371_10690683	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021560\|Ga0126371_10697163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1164	Open in IMG/M
3300021560\|Ga0126371_11241345	Not Available	880	Open in IMG/M
3300022756\|Ga0222622_10829563	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027461\|Ga0207601_113490	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028608\|Ga0247819_10900611	Not Available	554	Open in IMG/M
3300031231\|Ga0170824_112953138	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031545\|Ga0318541_10607385	Not Available	612	Open in IMG/M
3300031546\|Ga0318538_10182558	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300031716\|Ga0310813_10961111	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031726\|Ga0302321_103160245	Not Available	537	Open in IMG/M
3300031736\|Ga0318501_10863460	Not Available	503	Open in IMG/M
3300031744\|Ga0306918_11528357	Not Available	510	Open in IMG/M
3300031879\|Ga0306919_10588649	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300031890\|Ga0306925_10240127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1953	Open in IMG/M
3300031910\|Ga0306923_10427258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1505	Open in IMG/M
3300031912\|Ga0306921_11447453	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031942\|Ga0310916_10505950	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300031946\|Ga0310910_10201898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1543	Open in IMG/M
3300032001\|Ga0306922_10431825	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300032025\|Ga0318507_10445285	Not Available	564	Open in IMG/M
3300032261\|Ga0306920_100011376	All Organisms → cellular organisms → Bacteria	12014	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	15.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Plants	Host-Associated → Plants	15.38%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.77%
Roots	Host-Associated → Plants → Roots	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.12%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	28.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03952850	2088090014	Soil	MGTPTPTDFTVRFSTEVARVLQCDDATGRIEFTVDAGSKGDSSICLEHHPASWPRGPRYELAFHRAKQFLESCGYKVEIYGE
GPIPI_02948970	2088090014	Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWARKTRYELAFLRAKQFLESCGYEVEIYGE
SwRhRL3b_0240.00001960	2162886006	Switchgrass Rhizosphere	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
FE1_02042570	2189573002	Grass Soil	MESRTSTNFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE
ICChiseqgaiiDRAFT_05023822	3300000033	Soil	MGSRTSTNFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGXRXICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
INPhiseqgaiiFebDRAFT_1007446162	3300000364	Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWXRKTRYELAFLRAKQFLESCGYEVEIYGE*
INPhiseqgaiiFebDRAFT_1007454972	3300000364	Soil	MKSRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGERSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
INPhiseqgaiiFebDRAFT_1007473152	3300000364	Soil	MEPRTSSDFKVRFSADVAGVLECDDATGRIEFALGAGSKGEGSICLEHHPASRPRGPRYELAFLRAKQFLESCGYEVEVYSE*
INPhiseqgaiiFebDRAFT_1007489272	3300000364	Soil	MYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSVCLQHHPANAPRVRRYELAFAKAKQFLESCGYEVETRSE*
AP72_2010_repI_A1DRAFT_10197101	3300000650	Forest Soil	MESRTYTDFKVRFNGDVAGVLECKDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
JGI11643J11755_110749181	3300000787	Soil	MXSRTSTNFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGXRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
JGI1027J11758_127203022	3300000789	Soil	MYTDFKVRFSGDVVGVLECEDAIGTIEFTLEAGSKGDRSICLRHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0062589_1005162612	3300004156	Soil	MESRTPVDFKVRFSEDVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0062589_1005828912	3300004156	Soil	MESRTYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0062590_1011790251	3300004157	Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0063356_1014126332	3300004463	Arabidopsis Thaliana Rhizosphere	MGSRTSTNFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGERSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0062592_1010687451	3300004480	Soil	MESRTSTDFKVRFNGDVAGVLECEDAIGIIEFTLDAGSKSDRSICLQHHPASVPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0062591_1029564491	3300004643	Soil	ADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0065704_100074263	3300005289	Switchgrass Rhizosphere	MESRTPVXFKVRFSADVAGILEYDDATGRIEFTLXAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0065712_102343722	3300005290	Miscanthus Rhizosphere	MPSPTTDFTVRFSTEVARVLQCDDATGRIEFTLDVGSKGGRSICLEHHPLNWPRGPRYDRAFQRAKQFLESCGYEVEI*
Ga0066388_1011042792	3300005332	Tropical Forest Soil	VADFVSLDCFMESRIYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYLVETRSE*
Ga0066388_1035077691	3300005332	Tropical Forest Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0070711_1019122202	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SVSMAVADFVSLDCFMESRMYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE*
Ga0066903_1003832462	3300005764	Tropical Forest Soil	MESRTSSDFKVRFSADVAGVLECDDATGRIEFALGAGSKGDGSICLEHHPASRPRGPRYELAFLRAKQFLESCEYEVEVYSE*
Ga0066903_1009973752	3300005764	Tropical Forest Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPEGWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0066903_1037987322	3300005764	Tropical Forest Soil	MESRTSTDFKVRFNGDVVGVLECEDATGTIEFTLDAGSKGDRSICLQHHPAGAPRGQRYDLAFLRAKQFLDSCGYVVEICDD*
Ga0066903_1044000702	3300005764	Tropical Forest Soil	MYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE*
Ga0066903_1047557931	3300005764	Tropical Forest Soil	MESRTYTDFKVKFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGQRYDLAFRKAKQFLESCGYLVETRSE*
Ga0066903_1056415241	3300005764	Tropical Forest Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0066903_1056714812	3300005764	Tropical Forest Soil	MESRTYTDFKVRFNGDVVGVLECEDAIGTIEFTLDAGSKGDRSICLRHHPANAPRGRRYELAFGKAKQFLESCGYEVETYSE*
Ga0066903_1067279672	3300005764	Tropical Forest Soil	MKSRTSTDFKVRFNGDVVGVLECEDAAGTIEFTLDAGSKGDRSICLQHHPVTAPRGQRYDLAFLRAKQFLESCGYVVEICDD
Ga0068871_1020260242	3300006358	Miscanthus Rhizosphere	PTTDFTVRFSTEVARVLQCDDATGRIEFTLDVGSKGGRSICLEHHPLNWPRGPRYDRAFQRAKQFLESCGYEVEI*
Ga0075428_1010972102	3300006844	Populus Rhizosphere	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYE
Ga0075428_1014653242	3300006844	Populus Rhizosphere	MGSRTSTNFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPARAPRGQRYDLAFLKAKQFLESCGYLVETHSE*
Ga0075425_1010834913	3300006854	Populus Rhizosphere	MYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEV
Ga0075424_1005418882	3300006904	Populus Rhizosphere	MESRTSPDFNVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYFVETRSE*
Ga0111539_105394712	3300009094	Populus Rhizosphere	MESRTSPDFNVRFNGDVAGILECEDAIGTIEFTLDAGSKGERSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETHSE*
Ga0075423_103009612	3300009162	Populus Rhizosphere	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAVWPRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0075423_110658742	3300009162	Populus Rhizosphere	MESRTSPDFNVRFNGDVAGILECEDAIGTIEFTLDSGAKGERSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETHSE*
Ga0126374_105576651	3300009792	Tropical Forest Soil	MESRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYLVETRSE*
Ga0126380_106950601	3300010043	Tropical Forest Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFAKARQFLESCGYLVEIRSE*
Ga0126380_107264021	3300010043	Tropical Forest Soil	MESRTSTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANIPRGRRYEFAFAKAKQFLESCGYLVETRSE*
Ga0126384_102383851	3300010046	Tropical Forest Soil	MKAEKDSKLQSNCAGFMESRTSTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0126384_103399292	3300010046	Tropical Forest Soil	MESRSYTDFKVRFNGDVVGILECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126382_106410701	3300010047	Tropical Forest Soil	MAVADFVSLDCFMEPRTYTDFTVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYLVETRSE*
Ga0126373_102632871	3300010048	Tropical Forest Soil	MKAEKDSKLQSNCAGFMESRTSTDFKVRFNGDVVGVLECEDATGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYELAFLKAKQFLESCGYVVEIWDD*
Ga0126373_108196201	3300010048	Tropical Forest Soil	MESRSYADFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126376_121077872	3300010359	Tropical Forest Soil	RFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFRKAKQFLESCGYLVETRSE*
Ga0126372_104115591	3300010360	Tropical Forest Soil	MEPRTYTDFTVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126378_106423521	3300010361	Tropical Forest Soil	MAVADFVSLDWFMESRTYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE*
Ga0126378_113304611	3300010361	Tropical Forest Soil	MESRTYTDFKVKFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETRSE*
Ga0126377_111603021	3300010362	Tropical Forest Soil	MESRTSTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFRKAKQFLESCGYLVETRSE*
Ga0126377_132918691	3300010362	Tropical Forest Soil	MESRTSTDFKVRFNGDVVGVLECEDATGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYELAFLRAKQFLESCGYVVEICDE*
Ga0126379_106050291	3300010366	Tropical Forest Soil	MESRTSTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126379_118571981	3300010366	Tropical Forest Soil	MKAEKDSKLQSNCAGFMESRTSTDFKVRFNGDVVGVLECEDATGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLRAKQFLESCGYVVEICDD*
Ga0126381_1007417002	3300010376	Tropical Forest Soil	MESRSYTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126381_1010541192	3300010376	Tropical Forest Soil	MESRSYADFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE*
Ga0126381_1021777212	3300010376	Tropical Forest Soil	GLMESRTYTDFKVKFNGDVAGVLECEDAIGTVEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0126381_1041966802	3300010376	Tropical Forest Soil	MESRTYTDFKVKFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0126383_106252051	3300010398	Tropical Forest Soil	MESRTSTDFKVRFNGDVAGVLECEDATGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQF
Ga0126383_128239031	3300010398	Tropical Forest Soil	MESRTCIDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQF
Ga0137365_101527042	3300012201	Vadose Zone Soil	MESRTYTDFKVRFNGDVVGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYDVETYSE*
Ga0137366_108542031	3300012354	Vadose Zone Soil	MAVADFVSLDCFMESRTYTDFKVRFSGDVVGVLECQDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126375_107486721	3300012948	Tropical Forest Soil	TYTDFTVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0126375_108146641	3300012948	Tropical Forest Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPAGWSRKTRYELAFLRAKQFLESCGYEVEIYGE*
Ga0126375_118115111	3300012948	Tropical Forest Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGQRYDLAFRKAKQFLESCGYLVEIRSE*
Ga0164298_106537211	3300012955	Soil	MAVADFVSLDCFMESRMYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAEAKQFLESCGYEVETRSE*
Ga0164302_111351422	3300012961	Soil	MAVADFVSLGCFMESRMYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE*
Ga0126369_102637841	3300012971	Tropical Forest Soil	MYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0126369_104913482	3300012971	Tropical Forest Soil	MESRTYTDFKVKFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASVPRGRRYELAFVKAKQFLESCGYEVETYSE*
Ga0163163_100002536	3300014325	Switchgrass Rhizosphere	MDSPTPNDFTVRFSTEVARVLECDDATGRIKFGLDSGSKGDRSICLEHHPADWPRGRRYDLAFRCAKEYLESCGFEVEIYGR*
Ga0173478_106625091	3300015201	Soil	RFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASVPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0132256_1000416724	3300015372	Arabidopsis Rhizosphere	MAVADFVSLDWFMESRTYTDFKVRFSGDVVGVLECEDAKGKIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0132257_1017896102	3300015373	Arabidopsis Rhizosphere	MESRTSTDFKVRFNGDVVGVLECEDAIGTIEFSLDAGSKGDRSICLQHHPPSAPRGQRYDLAFLKAKQFLESCGYEVETRSE*
Ga0132255_1007258112	3300015374	Arabidopsis Rhizosphere	MAVADFVSLDCFMESRMYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE*
Ga0132255_1055139041	3300015374	Arabidopsis Rhizosphere	MGSRTSTNFKVRFNGDVVGVLECEDAIGTIEFSLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE*
Ga0182033_101669742	3300016319	Soil	MESRSYTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE
Ga0182033_107492011	3300016319	Soil	MESRTSTDFKVRFNGDVAGVVECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Ga0182034_105011012	3300016371	Soil	MESRTYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPSNAPRGRRYELAFAKAKQFLESCGYEVETRSE
Ga0182040_112281772	3300016387	Soil	YTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFGKAKQFLESCGYEVETYSE
Ga0182037_104562431	3300016404	Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Ga0182039_106312112	3300016422	Soil	MESRTYTDFKVKFNGDVAGVLECEDAIGTIEFTLGAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Ga0126371_106906831	3300021560	Tropical Forest Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRAICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE
Ga0126371_106971632	3300021560	Tropical Forest Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPEGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
Ga0126371_112413452	3300021560	Tropical Forest Soil	MESRSYTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETYSE
Ga0222622_108295631	3300022756	Groundwater Sediment	MESRTPVDFKARFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
Ga0207601_1134901	3300027461	Soil	TPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
Ga0247819_109006111	3300028608	Soil	MESRTPVDFKVRFSADVAGILEYDDATGRIEFTLDAGSKGDRSIGLQHHPAGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
Ga0170824_1129531381	3300031231	Forest Soil	MESRTSSDFKVRFSADVAGVLECDDATGRIEFALGAGSKGEGSICLEHHPASRPRGPRYELAFLRAKQFLESCGYEVEVYSE
Ga0318541_106073851	3300031545	Soil	MESRTSTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQF
Ga0318538_101825581	3300031546	Soil	VRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAKQFLESCGYEVETRSE
Ga0310813_109611111	3300031716	Soil	MGSRTSTNFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGERSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE
Ga0302321_1031602452	3300031726	Fen	MTSPTPTDFTVRFSTEVARVLESDDATGRIRFTLDAGSKGDRSICLEHHPADWPRGPRYDLAFRRATEYLESCGYEVEIYGE
Ga0318501_108634601	3300031736	Soil	MESRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCG
Ga0306918_115283571	3300031744	Soil	MESRSYTDFKVRFNGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPANAPRGRRYELAFAKAK
Ga0306919_105886492	3300031879	Soil	GFMESRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE
Ga0306925_102401272	3300031890	Soil	MESRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE
Ga0306923_104272581	3300031910	Soil	MESRTPVDFKLRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPEGWPRKTQYELAFLRAKQFLESCGYEVEIYGE
Ga0306921_114474532	3300031912	Soil	ADFVLLDWFMESRTYTDFKVRFSGDVVGVLECEDAKGTIEFTLDAGSKGDRSICLQHHPSNAPRGRRYELAFAKAKQFLESCGYEVETYSE
Ga0310916_105059502	3300031942	Soil	KVKFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Ga0310910_102018982	3300031946	Soil	MESRTYTDFKVRFNGDVAGVLECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGQRYDLAFLKAKQFLESCGYLVETRSE
Ga0306922_104318251	3300032001	Soil	PSLGGVMESRTPVDFKLRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPEGWPRKTRYELAFLRAKQFLESCGYEVEIYGE
Ga0318507_104452851	3300032025	Soil	MESRTSTDFKVRFNGDVAGILECEDAIGTIEFTLDAGSKGDRSICLQHHPASAPRGRRYELAFVKAKQFLESCGYEVETYSE
Ga0306920_1000113763	3300032261	Soil	MESRTPVDFKLRFSADVAGILEYDDATGRIEFTLDAGSKGDRSICLRHHPEGWPRKTRYELAFLRAKQFLESCGYEVEIYGE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097417

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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