Metagenome / Metatranscriptome Family F097497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097497
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	50 residues
Representative Sequence	MPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEDDPE
Number of Associated Samples	53
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.16 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	85.58 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.577 % of family members)
Environment Ontology (ENVO)	Unclassified (89.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.53% β-sheet: 0.00% Coil/Unstructured: 89.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01042	Ribonuc_L-PSP	7.69
PF12680	SnoaL_2	6.73
PF13370	Fer4_13	6.73
PF09335	SNARE_assoc	5.77
PF02668	TauD	3.85
PF00903	Glyoxalase	2.88
PF00589	Phage_integrase	1.92
PF01425	Amidase	1.92
PF08238	Sel1	0.96
PF13847	Methyltransf_31	0.96
PF00034	Cytochrom_C	0.96
PF01475	FUR	0.96
PF13459	Fer4_15	0.96
PF11351	GTA_holin_3TM	0.96
PF00654	Voltage_CLC	0.96
PF00313	CSD	0.96
PF05930	Phage_AlpA	0.96
PF12681	Glyoxalase_2	0.96
PF13450	NAD_binding_8	0.96
PF02738	MoCoBD_1	0.96
PF13417	GST_N_3	0.96
PF13374	TPR_10	0.96
PF07883	Cupin_2	0.96
PF11953	DUF3470	0.96
PF14588	YjgF_endoribonc	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	7.69
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	5.77
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	5.77
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	5.77
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.85
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.92
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.96
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.96
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.92 %
Unclassified	root	N/A	22.12 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.92 %
Unclassified	root	N/A	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	31.73 %
Unclassified	root	N/A	22.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.27 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.50 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.88 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.96 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.92 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.92 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.96 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.96 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured nuHF2 cluster bacterium HF0770_42C12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	31.73 %
Unclassified	root	N/A	22.12 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	2.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.92 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.96 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.96 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2014642002\|2014663201	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	946	Open in IMG/M
3300001524\|Abe_1050352	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300001676\|TuiMalila_1008525	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300001680\|KiloMoana_10028720	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300001783\|Vondamm_10061524	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	1100	Open in IMG/M
3300001845\|shallow_1088183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300005399\|Ga0066860_10128910	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	885	Open in IMG/M
3300005945\|Ga0066381_10088397	Not Available	872	Open in IMG/M
3300005945\|Ga0066381_10153763	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	658	Open in IMG/M
3300005948\|Ga0066380_10070133	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005951\|Ga0066379_10314165	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006012\|Ga0066374_10154084	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006013\|Ga0066382_10068714	All Organisms → Viruses → Predicted Viral	1249	Open in IMG/M
3300006013\|Ga0066382_10069584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1241	Open in IMG/M
3300006019\|Ga0066375_10074984	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	1102	Open in IMG/M
3300006019\|Ga0066375_10193306	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006310\|Ga0068471_1516002	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006310\|Ga0068471_1613935	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	1017	Open in IMG/M
3300006311\|Ga0068478_1138084	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300006313\|Ga0068472_10433183	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	656	Open in IMG/M
3300006313\|Ga0068472_10833122	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	631	Open in IMG/M
3300006324\|Ga0068476_1092115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	705	Open in IMG/M
3300006338\|Ga0068482_1081036	Not Available	728	Open in IMG/M
3300006338\|Ga0068482_1225174	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	589	Open in IMG/M
3300006339\|Ga0068481_1084858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1136	Open in IMG/M
3300006339\|Ga0068481_1084859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1147	Open in IMG/M
3300006339\|Ga0068481_1187442	Not Available	784	Open in IMG/M
3300006339\|Ga0068481_1251343	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006339\|Ga0068481_1491648	Not Available	1146	Open in IMG/M
3300006340\|Ga0068503_10137750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300006340\|Ga0068503_10255557	Not Available	782	Open in IMG/M
3300006340\|Ga0068503_10707899	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	581	Open in IMG/M
3300006341\|Ga0068493_10217415	All Organisms → cellular organisms → Bacteria → Proteobacteria	2419	Open in IMG/M
3300006902\|Ga0066372_10314488	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300006902\|Ga0066372_10473028	Not Available	733	Open in IMG/M
3300006902\|Ga0066372_10476978	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	731	Open in IMG/M
3300007160\|Ga0099959_1101390	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300007283\|Ga0066366_10471581	Not Available	552	Open in IMG/M
3300007291\|Ga0066367_1124712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300007291\|Ga0066367_1195054	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300007291\|Ga0066367_1317942	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	614	Open in IMG/M
3300007291\|Ga0066367_1382908	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	562	Open in IMG/M
3300008225\|Ga0105352_1109866	Not Available	625	Open in IMG/M
3300008629\|Ga0115658_1117385	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300009173\|Ga0114996_10051361	All Organisms → cellular organisms → Bacteria → Proteobacteria	3721	Open in IMG/M
3300009173\|Ga0114996_10151837	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300009173\|Ga0114996_10361500	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	1121	Open in IMG/M
3300009173\|Ga0114996_10482615	Not Available	937	Open in IMG/M
3300009173\|Ga0114996_10553118	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	861	Open in IMG/M
3300009173\|Ga0114996_11100756	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	560	Open in IMG/M
3300009409\|Ga0114993_10116067	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300009605\|Ga0114906_1282803	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	531	Open in IMG/M
3300009703\|Ga0114933_11000396	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	529	Open in IMG/M
3300009786\|Ga0114999_10833798	Not Available	679	Open in IMG/M
3300010883\|Ga0133547_10554894	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300010883\|Ga0133547_11057214	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	1565	Open in IMG/M
3300010883\|Ga0133547_11943037	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	1080	Open in IMG/M
3300020354\|Ga0211608_10122261	Not Available	564	Open in IMG/M
3300020369\|Ga0211709_10162705	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	677	Open in IMG/M
3300020389\|Ga0211680_10126082	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	1038	Open in IMG/M
3300020426\|Ga0211536_10282335	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	647	Open in IMG/M
3300020447\|Ga0211691_10319525	Not Available	617	Open in IMG/M
3300021791\|Ga0226832_10064600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	1285	Open in IMG/M
3300021978\|Ga0232646_1220349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	642	Open in IMG/M
3300027630\|Ga0209432_1122731	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300027838\|Ga0209089_10002407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16580	Open in IMG/M
3300027838\|Ga0209089_10012102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6494	Open in IMG/M
3300027838\|Ga0209089_10018073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5041	Open in IMG/M
3300027838\|Ga0209089_10245345	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300027844\|Ga0209501_10125692	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	1727	Open in IMG/M
3300027844\|Ga0209501_10314860	Not Available	956	Open in IMG/M
3300031801\|Ga0310121_10293526	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300031801\|Ga0310121_10360906	Not Available	835	Open in IMG/M
3300031803\|Ga0310120_10365797	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031804\|Ga0310124_10088801	Not Available	1916	Open in IMG/M
3300031804\|Ga0310124_10519281	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	695	Open in IMG/M
3300032032\|Ga0315327_10564830	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	704	Open in IMG/M
3300032134\|Ga0315339_1007198	All Organisms → cellular organisms → Bacteria	6484	Open in IMG/M
3300032134\|Ga0315339_1017303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	3395	Open in IMG/M
3300032134\|Ga0315339_1020754	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300032134\|Ga0315339_1027447	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	2422	Open in IMG/M
3300032134\|Ga0315339_1029046	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300032134\|Ga0315339_1059926	Not Available	1362	Open in IMG/M
3300032134\|Ga0315339_1198300	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	546	Open in IMG/M
3300032138\|Ga0315338_1143247	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	751	Open in IMG/M
3300032161\|Ga0315301_1062371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300032278\|Ga0310345_10378474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1330	Open in IMG/M
3300032278\|Ga0310345_10551857	Not Available	1105	Open in IMG/M
3300032278\|Ga0310345_10908686	Not Available	859	Open in IMG/M
3300032278\|Ga0310345_10926363	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	850	Open in IMG/M
3300032278\|Ga0310345_11293723	Not Available	713	Open in IMG/M
3300032278\|Ga0310345_11970406	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	568	Open in IMG/M
3300032820\|Ga0310342_100401169	Not Available	1495	Open in IMG/M
3300032820\|Ga0310342_100430633	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300032820\|Ga0310342_100825767	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300032820\|Ga0310342_101098575	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	937	Open in IMG/M
3300032820\|Ga0310342_101395193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	832	Open in IMG/M
3300032820\|Ga0310342_101461433	Not Available	813	Open in IMG/M
3300032820\|Ga0310342_102084991	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	678	Open in IMG/M
3300032820\|Ga0310342_102129843	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	671	Open in IMG/M
3300032820\|Ga0310342_102549135	Not Available	612	Open in IMG/M
3300032820\|Ga0310342_102856211	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	576	Open in IMG/M
3300032820\|Ga0310342_103480033	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured nuHF2 cluster bacterium HF0770_42C12	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.65%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	6.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	64.42%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	12.50%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.88%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	2.88%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.96%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	35.58%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	16.35%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	12.50%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	6.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.81%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	2.88%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.92%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.92%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.96%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.96%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.96%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.96%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2014642002	Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) - 5_Below_upper_mesopelagic_500m	Environmental	Open in IMG/M
3300001524	Abe Hydrothermal Plume	Environmental	Open in IMG/M
3300001676	Black smokers hydrothermal plume microbial communities from Tui Malila, Lau Basin, Pacific Ocean	Environmental	Open in IMG/M
3300001680	Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300001845	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - lt1kb	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300008225	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8B Hudson Canyon	Environmental	Open in IMG/M
3300008629	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020354	Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)	Environmental	Open in IMG/M
3300020369	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032134	Ammonia-oxidizing marine archaeal communities from Pacific Ocean, United States - ASW #17	Environmental	Open in IMG/M
3300032138	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8	Environmental	Open in IMG/M
3300032161	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2014671986	2014642002	Marine	MPKKRRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEDIEDPEAQL
Abe_10503522	3300001524	Black Smokers Hydrothermal Plume	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIEDPEEP*
TuiMalila_10085257	3300001676	Black Smokers Hydrothermal Plume	MPKKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKPVEVTTKY*
KiloMoana_100287208	3300001680	Black Smokers Hydrothermal Plume	MPKKPRKPITPKQRDPSWQLRHALGHKVETNPKAYTRKLKHPEDIEDPEAQL*
Vondamm_100615242	3300001783	Hydrothermal Vent Plume	MPKKPRKRTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKPVEVTTKY*
shallow_10881831	3300001845	Hydrothermal Vent Plume	MPRKPRKPTTPKQRDPSWKLRHALGHTVEDNPKAYTRKRKHPKEIDL*
Ga0066860_101289103	3300005399	Marine	MPKKPRKRASPKQRDPSWRMRRALGHKVESNPKAYTRRRKHPTEDDGAGG
Ga0066381_100883973	3300005945	Marine	MPKKSRKRITPKQRDPSWQLRHALGHKVEDNPKAYTRKLKHPEEI
Ga0066381_101537632	3300005945	Marine	MPKKPHKRNAPKPRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDD
Ga0066380_100701332	3300005948	Marine	MPKKPRKRSTPKKRDPSWKLRHALGHKVEGNPKAYTRKLKHPEDIEDPEAQL*
Ga0066379_103141653	3300005951	Marine	MPKKPRKRSVPKQRDPSWRMRHALGHKVEPNLKAYTRKRKHPEEDYSEVMEYMKQ*
Ga0066374_101540843	3300006012	Marine	PTYKFVNITMPKKPRKHSTPKKRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEDNLEFISLEPPDT*
Ga0066382_100687142	3300006013	Marine	MPKKPRKPTTPKKRDPSWQLRHALGYKVEPDKMCYTRKQKHPKPVEVTTKY*
Ga0066382_100695843	3300006013	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPKAYTRK
Ga0066375_100749843	3300006019	Marine	MPKKPRKRSVPKQRDPSWRTRHALGHKVEIDPKAYTRKLKHPEEIEDPEEP*
Ga0066375_101933061	3300006019	Marine	AMPKIPRKPTTPKQHDPSGLLRHALGHKVEPNPKAYTRKRKHPREIDL*
Ga0068471_15160024	3300006310	Marine	MPKKPRKRTTPKKRDPSWQLRHALGHKVEPNPKAYTRKLKHLEEDDTDLSDE*
Ga0068471_16139351	3300006310	Marine	VILTMPKKPRKRTSPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDDPE*
Ga0068478_11380842	3300006311	Marine	MAILDHAKETPQATTPKQRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEEI*
Ga0068472_104331831	3300006313	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEDDNPDDPE*
Ga0068472_108331222	3300006313	Marine	MPKKPRKRSAPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPKDIEDPEAQL*
Ga0068476_10921153	3300006324	Marine	MPKKPRKRSVPKPRDPSWQLRHALGQKVEPNLKAYVRKPKHPKSIGDPEPSD*
Ga0068502_12297933	3300006336	Marine	MSTKSKRSSKKRKAIKQRDPSWQLRHALGHKVEGNPKAYTRKRKHPEEDDPE
Ga0068482_10810361	3300006338	Marine	MPKKPRKRNAPKQRDPSWRIRHALGHKVEANPKAYTR
Ga0068482_12251741	3300006338	Marine	MPKKPRKPITPKQRDHSWKLRHALGHKVEPNPKAYTR
Ga0068481_10848583	3300006339	Marine	MPKKPRKRSVPKQRDPSWRMRDALGHKVEANPKAYTRKLKHPKEDDPKGTEEMKR*
Ga0068481_10848593	3300006339	Marine	MPKKPRKRSVPKKRDPSWQLRHALGHKVEPNPKAYTRKLKHPEEIDDPESE*
Ga0068481_11874422	3300006339	Marine	MPKKPRKRITPKQRDPSWRLRHALGHKVEPNPKAYTRKPKHPEEDDPEEMEYMNQ*
Ga0068481_12513431	3300006339	Marine	SKKRVVKPRDPSWQLRHALGQKVESNLKAYVRKPKHPEEIDDIEPSD*
Ga0068481_14916481	3300006339	Marine	MPKKPRKRTTPKKRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEIED
Ga0068503_101377501	3300006340	Marine	MPKKLRKRITPKQRDPSWRIRHALGHKVEANPKAYTRKLKHPKEDNLEFIS
Ga0068503_102555572	3300006340	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPNAYTRKLKHPEDD
Ga0068503_107078992	3300006340	Marine	MPKKPRKRITPKQRDPSWKLRHALGHKVEGNPKAYTRKRKHPEEIEDPEAVAG*
Ga0068493_102174155	3300006341	Marine	MPKKPRKRNAPKQRDPSWQLRHALGHKVEDNPKAYTRKRKHPEEDDPLVTST
Ga0066372_103144881	3300006902	Marine	KQRDPSWQLRHALGHKVEGNPKAYTRKRKHPEEDNLELISLEPPDT*
Ga0066372_104730283	3300006902	Marine	MPKKPRKRTTPKKRDPSWKFRHALGHKVEGNPKAYTRKLKHPEDEDLE*
Ga0066372_104769782	3300006902	Marine	MPKKPRKRSVPKQRDPSWRMRHALGHQVEPNLKAYTRNSKHPEDDNSEVMEYMNQ*
Ga0099959_11013901	3300007160	Marine	AQNICASILAMPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEDNLEFISLEPPDT*
Ga0066366_104715811	3300007283	Marine	MRKKLRKRITPKQRDPSWRLRHALGHKVETNPKAYTRKLNHPEEDDTELSG*
Ga0066367_11247124	3300007291	Marine	MPKKPRKRSVPKQRDPSWQLRHALGYKVEIDPKAYTRKRKYPDEDPIEEP*
Ga0066367_11950543	3300007291	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVETNPKAYTRKLKHPEDINDPEPSD*
Ga0066367_13179421	3300007291	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDDPEIAPE*
Ga0066367_13829081	3300007291	Marine	PRKRTTPKKRDLSWQLRHALGHKVEDNPKAYTRKLKHPEDIEDPEAQL*
Ga0105352_11098662	3300008225	Methane Seep Mesocosm	MPKKPRKRSAPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIDDPEPSD*
Ga0115658_11173854	3300008629	Marine	MPKKPRKRTTPKKRDPSWRTRHALGHKVEANPKAYTRKLK
Ga0114996_100513611	3300009173	Marine	MAILYHDKKFHKRTTPKQRDPSRKLHHALGHKVEGNPKAYTRKLKHPKKDEPEER*
Ga0114996_101518373	3300009173	Marine	MPKKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKQVEVTTKY*
Ga0114996_103615001	3300009173	Marine	MPKKPRKRSVPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDETEIAPE*
Ga0114996_104826152	3300009173	Marine	MPKKPRKRSAPKQRDPSWQLRHALRHKVEIDPKAYTRKLKHPEEIEDPEEP*
Ga0114996_105531182	3300009173	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIDDPEPSD*
Ga0114996_111007562	3300009173	Marine	MPKKPRKRTTPKKRDPSWQLRHALGHKVEIDPKAYTRKFKHPEEDETEIAPE*
Ga0114993_101160673	3300009409	Marine	MLKKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKQVEVTTKY*
Ga0114906_12828033	3300009605	Deep Ocean	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDETELSDE*
Ga0114933_110003961	3300009703	Deep Subsurface	MTKKPRKRTTPKQRDPSWRMRHALGHKVESNPKAYTRKRKHPEEIDPVEE
Ga0114999_108337982	3300009786	Marine	MPKKLRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIDDPEPSD*
Ga0133547_105548945	3300010883	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPKEDDTEIAPE*
Ga0133547_110572141	3300010883	Marine	KKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKQVEVTTKY*
Ga0133547_119430372	3300010883	Marine	MPKKPRKRAARKQRDVSWQLRHALGHKVEGNPKAYTRKLKHPEEDDPETSTE*
Ga0211608_101222611	3300020354	Marine	MPKKPRKRTTPKRRDPSCQLRHALGHKVEIDPKAYT
Ga0211709_101627053	3300020369	Marine	RTTPKQRDPSWQLRHALGHKVEGDPKAYTRKLKHPEEDETETSAE
Ga0211680_101260821	3300020389	Marine	KKPRKRTTPKKRDPSWQLRHALGYKVEPDKMCYTRKQKHPKPVEVTTKY
Ga0211536_102823351	3300020426	Marine	MPKKPRKRNAPKQRDPSWQLRHALGQKVEPNLKAYVRKPKHPKKDEPETTPTLF
Ga0211691_103195251	3300020447	Marine	MPKKPRKRSVPKQRDPSWRTRHALGHKVETNPKAYTRKLK
Ga0226832_100646001	3300021791	Hydrothermal Vent Fluids	MPKKSRNRTTPKQRDPSWQLRHALGHKVEPNLKAYVRKPKHPEDIEDPEADVS
Ga0232646_12203491	3300021978	Hydrothermal Vent Fluids	MPKKPRKRTTPKQRDPSWKLRHALGYKAEPDPKAYTRKLKHP
Ga0209432_11227311	3300027630	Marine	MPKKPRKRNAPKPRDPSWQLRHALGHMVEDNPKAYTRKLKHPEEDNLEFISLEPPDT
Ga0209089_1000240713	3300027838	Marine	MPKKPRKRSAPKQRDPSWQLRHALRHKVEIDPKAYTRKLKHPEEIEDPEEP
Ga0209089_100121027	3300027838	Marine	MPKKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKQVEVTTKY
Ga0209089_100180734	3300027838	Marine	MAILYHDKKFHKRTTPKQRDPSRKLHHALGHKVEGNPKAYTRKLKHPKKDEPEER
Ga0209089_102453452	3300027838	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDNLEFISLEPPDT
Ga0209501_101256923	3300027844	Marine	MPKKPRKRSVPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDETEIAPE
Ga0209501_103148603	3300027844	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIDDPEPSD
Ga0310121_102935263	3300031801	Marine	KQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDNLEFISLEPPDT
Ga0310121_103609061	3300031801	Marine	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDETE
Ga0310120_103657972	3300031803	Marine	MPKKPRKRSVPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDNLEFISLEPPDT
Ga0310124_100888014	3300031804	Marine	MISTPKKPRKRTTRKQRDPSXQLRHALGHKVEIDPKAYTRKLKHPEEAETELSDE
Ga0310124_105192811	3300031804	Marine	MPKKPRKPTTPKQRDPSWQLRHPLGHKVEIDPKAYTRKLKHPEEDDPEIAPE
Ga0315327_105648302	3300032032	Seawater	MPKKPRKRSVSKQRDPSWRTRHALGHKVEANPKAYTRKLKHPEDIEDPEAQL
Ga0315339_10071988	3300032134	Seawater	MPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPKAYTRKLKHPEEDDPE
Ga0315339_10173034	3300032134	Seawater	MPKKPRKRNVPKQRDPSWRTRHALGHKVEPNPKAYARKLKHPEDDDPDEP
Ga0315339_10207544	3300032134	Seawater	MPKKPRKRTTPKQRDPSWKLRHALGHKVEGNPKAYTRKLKYPEEINKPEPSD
Ga0315339_10274472	3300032134	Seawater	MPKKPRKRNAPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEIEDPEGA
Ga0315339_10290461	3300032134	Seawater	MPKKPRKRSAPKQRDPSWKQAHTLGHKVEGNPKTYTRKLKHLEEDDTELSDD
Ga0315339_10599263	3300032134	Seawater	MPKKPRKRSAPKQRDPSWQLRHALGHKVEPNPKAYTRKQKHPEEDDTELSDE
Ga0315339_11983001	3300032134	Seawater	MPKKPRKRTTPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPKIDEPEIETE
Ga0315338_11432472	3300032138	Seawater	MPKKPRKRTTPKQRDPSWQLRHALGHKVEGNPKAYTRKLKHPEDIEDPEAQL
Ga0315301_10623711	3300032161	Marine	MPKKPRKRTTPKQRDPSWQLRHALGQKVEPNPKAYTRKRKHPEEDNLEFISLEP
Ga0310345_103784742	3300032278	Seawater	MLAMPKKPHKRASPKQRDPSWRMRRALGRKVETNPKAYTRT
Ga0310345_105518572	3300032278	Seawater	VSTKSKKSSKKRKAVKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPEEDDPETTP
Ga0310345_109086862	3300032278	Seawater	VVKPRDPSWQLRHALGQKVEPNPKAYVRKPKRPKKIDDPEPSD
Ga0310345_109263633	3300032278	Seawater	MPKNPRKRTTPKQRDPPWKLRHALGHKVEANPKAYTRKLKHPEDIEDPEAQL
Ga0310345_112937232	3300032278	Seawater	MPKKPRKRSPPKKRDPSWQLRHALGHKVEDDPKAYTRKLKHPEEEYNELSDE
Ga0310345_119704061	3300032278	Seawater	KRSVPKQRDPSWRMRDALGHKVEANPKAYTRKLKHLK
Ga0310342_1004011691	3300032820	Seawater	MPKKPRKRSAPKQRDPSWRMRHALGHKVEANPKAYTRKLKHSKEDDPEGTED
Ga0310342_1004306333	3300032820	Seawater	MPKKPRKRSAPKQRDPSWQLRHALGHKVEIDPKAYTRKLKHPKDIEDPEAQL
Ga0310342_1008257672	3300032820	Seawater	MPKKLRKRITPKQRDPSWSMRHALGHKVEPNPKAYIRRLKHPELVNDDD
Ga0310342_1010985752	3300032820	Seawater	MPKKPRKRTTPKQRDPSWQLRHALGHKVEPNPKAYTRKLKHPEDEDPDDPE
Ga0310342_1013951932	3300032820	Seawater	IWVMLAMPKKPHKRASPKQRDPSWRMRRALGRKVETNPKAYTRT
Ga0310342_1014614333	3300032820	Seawater	MILSMPKKPRKRHAPKQRDPSWQLLHALGHKVEIDSKAYTRKLKHPGEDDPEAEVSSLPGYALQ
Ga0310342_1020849911	3300032820	Seawater	MPKKPRKRSVPKQREPSWQLRHALGQKVEPNLKAYVRKPKHPKQEEPEVETE
Ga0310342_1021298432	3300032820	Seawater	MPKIPRKRVIPKQRDPSWRMRHALGHKVEANPKAYTRKLKHPKEDDPKGTEEMKQ
Ga0310342_1025491352	3300032820	Seawater	MPKKPRKRITPKQRDLSWKLRHALGHKGEANPKAYIRNRKLPEEDNSKVMWST
Ga0310342_1028562113	3300032820	Seawater	MPKKPRKRTTPKQRDPSWRMRHALGHKVEANPKAYTRKLKHPKEDDPEGTEEMKR
Ga0310342_1034800331	3300032820	Seawater	KPRKRSVPKQRDPSWRTRQALGHKVEPNPKAYTRKLKHPEEIDDIEPSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences