Metagenome Family F097586

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097586
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	49 residues
Representative Sequence	VQIGRGVRQGCCLSPILFNLYSECLTKEALDGLGDFNIGGQIIQTVKYA
Number of Associated Samples	34
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	7.69 %
% of genes from short scaffolds (< 2000 bps)	7.69 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (96.154 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.97% β-sheet: 0.00% Coil/Unstructured: 74.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00078	RVT_1	42.31
PF14370	Topo_C_assoc	0.96
PF00719	Pyrophosphatase	0.96
PF01359	Transposase_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
All Organisms	root	All Organisms	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
cellular organisms	root	All Organisms → cellular organisms	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	8.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.38 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001343\|JGI20172J14457_10085913	All Organisms → cellular organisms → Eukaryota → Opisthokonta	530	Open in IMG/M
3300002507\|JGI24697J35500_10644613	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300002507\|JGI24697J35500_11090735	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1137	Open in IMG/M
3300009784\|Ga0123357_10005046	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	15712	Open in IMG/M
3300027539\|Ga0209424_1229100	All Organisms → cellular organisms → Eukaryota → Opisthokonta	641	Open in IMG/M
3300027864\|Ga0209755_10277163	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1641	Open in IMG/M
3300027864\|Ga0209755_10909044	All Organisms → cellular organisms → Eukaryota → Opisthokonta	678	Open in IMG/M
3300027891\|Ga0209628_10960244	All Organisms → cellular organisms → Eukaryota → Opisthokonta	769	Open in IMG/M
3300027984\|Ga0209629_10038601	All Organisms → cellular organisms → Eukaryota → Opisthokonta	4540	Open in IMG/M
3300028325\|Ga0268261_10543298	All Organisms → cellular organisms → Eukaryota → Opisthokonta	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	98.08%
Insecta	Host-Associated → Insecta	1.92%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	98.08%
Digestive System	Host-Associated → Insecta → Digestive System	1.92%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	98.08%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	97.12%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified	1.92%
Proctodeal Segment	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment	0.96%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	96.15%
Termite Gut	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut	1.92%
Macrotermes Natalensis Queen Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Macrotermes Natalensis Queen Gut	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111004	Macrotermes natalensis queen gut microbiome	Host-Associated	Open in IMG/M
3300001343	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5	Host-Associated	Open in IMG/M
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated	Open in IMG/M
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300002462	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4	Host-Associated	Open in IMG/M
3300002469	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated	Open in IMG/M
3300002501	Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1	Host-Associated	Open in IMG/M
3300002504	Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4	Host-Associated	Open in IMG/M
3300002507	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1	Host-Associated	Open in IMG/M
3300002508	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1	Host-Associated	Open in IMG/M
3300002509	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4	Host-Associated	Open in IMG/M
3300002552	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1	Host-Associated	Open in IMG/M
3300002834	Cornitermes sp. P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P4	Host-Associated	Open in IMG/M
3300005201	Microcerotermes gut microbial communities from Indooroopilly, Australia - IN01 metagenome	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300006226	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010882	Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4	Host-Associated	Open in IMG/M
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027864	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2212721036	2209111004	Macrotermes Natalensis Queen Gut	VKIGREVRQGCCLSPIPFNSYSEYLTKEAPEGSVDFKIGGQVVPTVKLADD
JGI20172J14457_100249902	3300001343	Termite Gut	VKIGRGVRQGXCLSPILFNXYSEYLTKEALEGLGDLKIGGLITHTVKYADDLVTG*
JGI20172J14457_100859131	3300001343	Termite Gut	VKFGREVRQGCYLSPVLFNLCSECLTEEALEGFGDFKIGGQIIHIVKYADDL
JGI20163J15578_101553973	3300001544	Termite Gut	VTRRAKIGRGVRKECCLSPILFNLYSEYLTKEAVEGFGDFKIEGQVVYTVQYADG
JGI20163J15578_104822431	3300001544	Termite Gut	VQTGRGVRQECCLSPILLILYSGCLTKEALDGLGDFNIGGQIIQTVKYADD
JGI20163J15578_105599981	3300001544	Termite Gut	RIVQIGRGVRQGCCLSPILFNLYSECPAKEALEGFGDFKIGGQIIHTVK*
JGI20165J26630_102128203	3300002125	Termite Gut	VQIGREVRQRCCLSPILFNLYSECLTKEALDGLGDFNIRGQIIRTVKYADDL
JGI20165J26630_105817591	3300002125	Termite Gut	ETRIVQIGRGVRQGCCLSPILFNLYSECPAKEALEGFGDFKIGGQIIHTVK*
JGI20164J26629_102430591	3300002127	Termite Gut	VQTGRGVRQRRCLSSILFNLYSEWFIKEAVEGFGDLKIGGQIIHTVKYTDGLVLLAKEE
JGI20164J26629_102437851	3300002127	Termite Gut	GRGVRQGCCLSPFLFNLCSKCLTKEALDGLGDFTSEGKLFKL*
JGI20164J26629_104076221	3300002127	Termite Gut	VQIGRRVRQGCCLSPILFNLYSEYLTKEALGGLGDVNIGEQIIQTVKYAD
JGI20164J26629_105565532	3300002127	Termite Gut	VQIGRGVRQGCYLSPILSNLYSECLTNEALDGPGDLSIGGQIIQTVK
JGI20166J26741_101126422	3300002175	Termite Gut	VKIERGVRQGCCLSPVLFNVYSECLIKEALEGFGDFKIGGQIIHTVK*
JGI20166J26741_101658451	3300002175	Termite Gut	IGRGVRQGCCLSPILFNLYSECLTKKALDGLGDFNIGGQII*
JGI20166J26741_116039723	3300002175	Termite Gut	VQIGRGVRQGCCLSQILFNLYSECLTKEALDGLGDFNIGGQIIQTVKY
JGI20166J26741_116128404	3300002175	Termite Gut	VQIGRGVRQGCCLSTILFNLYNECLTKEALDGLGDFNIGGQIIQTVK
JGI20166J26741_119888211	3300002175	Termite Gut	VQIGRGVRQGCCLSPILFNLYSECLIKEALDGLGDFSIERQIIQTVKNADGLVL
JGI20163J26743_103483822	3300002185	Termite Gut	VQIGRGVRQECCLSPILFNLYSECLTKEALDGFGNLNFGGKIIQTVKYADEFVLKA
JGI20163J26743_103627602	3300002185	Termite Gut	GETRSVQIGRGVRQGCCLSPILFKLYSECLTKEALDGLGDFNIRAKIIQTVK*
JGI20163J26743_106689751	3300002185	Termite Gut	VKFGTGVKQGCCLSPILFNLYSECLTKRDMEGFGDFKIGGQ
JGI20163J26743_107422691	3300002185	Termite Gut	VETGRGVRQGCCLSPILFNLYSECLTKEALDGLGDFNIGGK
JGI20169J29049_108464731	3300002238	Termite Gut	VKTGRGFRQGCCLSPILFNLYSEYLTKEDLEGLGDFKI
JGI20169J29049_108495813	3300002238	Termite Gut	VKIGRGVRQGRFLSPILFNLYSEYLTKEALEGLGAFKIGGQIIH
JGI20169J29049_109627241	3300002238	Termite Gut	VKIGREVSQGCCLSPILFNLYGEYLTKEALEGLGDYKIGRQIIHTVKYADDLVV
JGI20169J29049_111080303	3300002238	Termite Gut	VKIGRGVKQGCCLSPILFNLYSEYLTKEALEGLGDFKIGGQ
JGI20169J29049_111368441	3300002238	Termite Gut	SVKIGRGVRQGCCLSPILFNLYSEYLTKEASEVFGDFKMSGKIIHTVK*
JGI20169J29049_113516965	3300002238	Termite Gut	VKIGRGVRQGCCLSPILFNLYSEYLTKEALEGSGDFK*
JGI20171J29575_117025703	3300002308	Termite Gut	IGRGVRQGCCLSPILFNLYSEYLTKEASEVFGDFKMSGKIIHTVK*
JGI20171J29575_118992171	3300002308	Termite Gut	VNIGRGVRQGCCLSPILFSLYSKCLTKEALEGFGDFKIGGQI
JGI20171J29575_123063772	3300002308	Termite Gut	VKIGREVSQGCCLSPILFNLYGEYLTKEALEGLGDYKIGRQIIHTVKYADD
JGI20171J29575_123916701	3300002308	Termite Gut	VKIGRGVRQRCCLSQILFNLCSECLTKEALEGFGDFKIGGKIIHTVKYADDLV
JGI24702J35022_108257152	3300002462	Termite Gut	VQIGRGVRQGCCLSPSLFKLYSEYLAKEALDGLGDFNIGGQIIQTVKYA
JGI24701J34945_102512021	3300002469	Termite Gut	VKIGRGVRKECCLSPILLNLYSECFTREALEGFGDLKIGGQIIHTVKYADD
JGI24703J35330_109078641	3300002501	Termite Gut	VKIGRGVRQGYSLSPIVFNLYSECLTKEALEGFGDFKIGGKIINTLKYAEDPV
JGI24703J35330_116210711	3300002501	Termite Gut	VKIGRGVRQGCRLSPTLFNLYSEYLTKEALEGFGDFKIGEQVIHAVKYA
JGI24703J35330_116594244	3300002501	Termite Gut	VKIGRGVGQECCLSPILFNLYSKCLTKEALEGFGDFKIGGKIINTLKYADDLVL
JGI24705J35276_115447282	3300002504	Termite Gut	VKIGRGVRQGYSLSPIVFNLYSECLTKEALEGFGDFKIGGKIINTLKYADDL
JGI24705J35276_120997053	3300002504	Termite Gut	VKIGKEVRQGCCLSSILFNLYNECLTKEALEGFEDFKIGGKIIHNVKY
JGI24697J35500_104396831	3300002507	Termite Gut	VQTGRGVRQGCCLSPILFNLYSECLAKKALDGLGDFNIGGQIIQTVKYAD
JGI24697J35500_106446131	3300002507	Termite Gut	VQIGRGVRQGCGLSLILFNLYSKCLTKEALDGLGDFNIGGQIIQTVKYADDLVLMA
JGI24697J35500_106910022	3300002507	Termite Gut	VQIGRAVRQGCCLSPILFNLYSECLTKEVLDGLGDFNIGGQIIQTVKYADD
JGI24697J35500_107725961	3300002507	Termite Gut	VQIGRGVRQGRCLSPVLFNLYSECLTKEALDGLGDFNIGGQIIQTVKYAD
JGI24697J35500_108215822	3300002507	Termite Gut	VQTGRGVRQGCCLSAILFNLYSECLTKEAPDGLGDFNIGGQIIQTVKYADDLVL
JGI24697J35500_109067902	3300002507	Termite Gut	VQIGRGVRQGWCLSPILFNLYSECLTKEALDGLGDFNIGGQIIQ
JGI24697J35500_110907351	3300002507	Termite Gut	VCGFGKGVRKVCFLSKILFNFYSEYLTKEALDRIRDFNIGGQIIQTVKYAGDLV*
JGI24697J35500_111318083	3300002507	Termite Gut	VKTGRGVRQGCCLSPILFNLYSECLTKEALEGFGDFKIGG*
JGI24697J35500_111360764	3300002507	Termite Gut	VQTGRGVRQGCCLSPVLFNLYSECLTKEALDGLGDFNIGGQ
JGI24697J35500_112004251	3300002507	Termite Gut	VQIGRGVRQGCCLSPILFNLYSECLTKEALDGLGDFNIGGQIIQTVKYA
JGI24697J35500_112298931	3300002507	Termite Gut	MKTGRGIRQGYCSSPILFNLYSEYLTKEALEGFGDFKTGGQVNCTVK*
JGI24700J35501_101771621	3300002508	Termite Gut	MACIYMQIGRGVRHGCCLSPSLFNLYSEYLAKGALDGLGDFNIGGQIIQ
JGI24700J35501_102969141	3300002508	Termite Gut	GVRQGCCLSPILFNLYNEFLTKEALDGLGDFKIGGQIIQTVKHADDLVLVNGAAGQG*
JGI24700J35501_105528502	3300002508	Termite Gut	RGETRSVQIGRGVRQGCCLSPILFNLYSEFLTKEALDGLGDFKIGGQFIQTVK*
JGI24699J35502_109678811	3300002509	Termite Gut	VQIGRGVRQGCCLSPILLNLYSECLTKEALDGLGDFNIGGKIIQTVKYAD
JGI24699J35502_109872363	3300002509	Termite Gut	VKIGRGVRQGCYLSPILFNLYSECLSKEALQDLGDFKRGG
JGI24699J35502_110467581	3300002509	Termite Gut	VQIGRAVRQGCCLSPILFNLYSECLTKEVLDGLGDFNIGGQIIQTVKYADDLV
JGI24694J35173_102410611	3300002552	Termite Gut	MRNVMNERVRQECCLSPIQFKLYNKCYTKEAFEGFGDFKTGGHVICTVK
JGI24696J40584_127372951	3300002834	Termite Gut	MKIGRGVRQGYCLSTILFNLYSECLTKEALEGFGDFKIGGHIIHIVKYADD*
JGI24696J40584_128483071	3300002834	Termite Gut	SVKIGRGVRQGCCLSPILFNLYSECLTKEALEGFGDFKIGGQIIHTVG*
Ga0072941_12301563	3300005201	Termite Gut	MKTGRGIRQGYCSSPILFKLYSEYLTKEALEGFGDFKTGGQVNCTVK*
Ga0072941_16299871	3300005201	Termite Gut	VQIGIGVRQGCCLSPIVFNLYSECLTKEAVEGFGDFKIVRQIIH
Ga0082212_102397213	3300006045	Termite Gut	VKIGRGVRQGCCLSPILFNLYSECLSKEALESFGNFKKRGKIIQTVKYPDELVLL
Ga0082212_108767291	3300006045	Termite Gut	MNTGRGIRQGCCLSLILFNVYGQYVTKEVLERFGDFKTGQV
Ga0082212_111522712	3300006045	Termite Gut	VKTGRGVRQGYCLSPILFNLYSESLTKEALEGFGDFKIGGQIIHTVKYANELRKKRCYRI
Ga0082212_111965502	3300006045	Termite Gut	GETRTVKIGRGVRQECCLSPILFNLYSECLSKEALEGFGDFKIDGQIINTLKYAG*
Ga0082212_113089081	3300006045	Termite Gut	VKIERGVRQGCCFLLILFKLYSECLIKEALEGFGDFEIGGQIIHTVT
Ga0099364_104995273	3300006226	Termite Gut	VQIGRGVIQGCYLSPSLFNLYSEYLAKEAMDGHGDFNIGGQIIQTVKYADDLV
Ga0099364_105270322	3300006226	Termite Gut	VKIGTGVRQRCCLSPVLFNLYSECLTKEALKGFGGFKIGGQIIHTVKYADDLVLLAKEE
Ga0099364_113614941	3300006226	Termite Gut	MQSRNVQIGRGIRQGCCLSPSLFNLYSKFLNKEALDGLGDFKIGGQI
Ga0123357_100050469	3300009784	Termite Gut	VKIGRGVRQGFCLSPILFNLYSECLTKEALEAFEDFKIGGQIIHTVKYADGLVLLAKE*
Ga0123357_105489733	3300009784	Termite Gut	VKIGRVVRQGCCLSPVLFNLYSECLTKEALEGFGDFKIGGQIIHTV
Ga0123355_101931383	3300009826	Termite Gut	VKNGRGVRQGCCLSPVLFNLYSECLTKEALEGFGDFKIGGQISHTEICR*
Ga0123355_103918161	3300009826	Termite Gut	VEIGRGVRQGCRLSPVLFNLYSECLTTEALEGFGDFKTVGQIIHTVKYAD
Ga0123355_104763563	3300009826	Termite Gut	RGETRSMKIGRGVRQGRCLSPVLFNLYSECLPKEALEGFGDFKIGGQIIHTVK*
Ga0123356_126456771	3300010049	Termite Gut	GRGVRQGCCLSPVLFNLYSECLTKEALEGFGDFKIGGKIIHTLKYAEIPL*
Ga0131853_101980661	3300010162	Termite Gut	VQIGKGVRQGCCLSPTLFNLYSEYLAKEALDGLGDLNIGGQIIQT
Ga0123354_102702033	3300010882	Termite Gut	MQTGRGVRQGCCLSPALFNLYSEYLAKEALDGLGDLNIGGQIIQTVK*
Ga0209424_12291002	3300027539	Termite Gut	VKFGREVRQGCYLSPVLFNLCSECLTEEALEGFGDFKIGGQIIHIVK
Ga0209423_103795831	3300027670	Termite Gut	IRQGCCLSPILFKLYSEYITKEALELFGDFKIGGQIIHIVK
Ga0209755_100309823	3300027864	Termite Gut	VKNGRGVRQGCCLSPILFNLYSECLTKEALNGLGDYKVGGGGKLFKL
Ga0209755_102771631	3300027864	Termite Gut	VKIGRGVRQGCCLPPILFNLYSECLTKEALDGLGDFKVRGKI
Ga0209755_106064271	3300027864	Termite Gut	VKIGKGVRQGCCLSPILFNLYSECLTKEVLDGLGDFKVGGQI
Ga0209755_108299311	3300027864	Termite Gut	VKTGRGVRQGCCLSPILFNLYIECLTKEALDGLGDFKVGGGGNLFKL
Ga0209755_109090441	3300027864	Termite Gut	VKIGRGVKQGCCLSPILFNLYSDCLTKEALEGFGDFKIGGKIIHTVRY
Ga0209628_101504482	3300027891	Termite Gut	VQIGRGVRQGCCLSPILFNLYSECLTKEALDGLGDFNIRGQFIKTVK
Ga0209628_106458371	3300027891	Termite Gut	VQIGRGVRQGCCLSTILFNLYNECLTKEALDGLGDFNIGGQIIQTVKYADGLVLIAKE
Ga0209628_109602443	3300027891	Termite Gut	VQIGRGDRQGCCLSPILFNLYNECLTKEALDGLGDFNIGGQIIQTV
Ga0209737_103304891	3300027904	Termite Gut	VQIGREVRQGYCLSPVLFNLYSECLSKEALDGLGDFKIGGQIIQTVKYADDLVLIAK
Ga0209737_111342004	3300027904	Termite Gut	VQIGRGVRQGYCLSPILFNLYSECFTKEALDGLGDFNIKGKII
Ga0209737_112535231	3300027904	Termite Gut	DRGETRSVQMGRGVRQGCCLSTILFNYYSECLTKEALDGLGDFNIRGQIIQTVK
Ga0209737_113477542	3300027904	Termite Gut	RGVSQGCCLSTILFKLYSECLTKEALDGLGDFNIGGQIIQTVKYANDIVSY
Ga0209737_117771411	3300027904	Termite Gut	VQIGRGVRQGCCLSPIPFNLYSECLTKEALDGLGDFNIGGQIIQTVKYAA
Ga0209737_118380141	3300027904	Termite Gut	VQIGRGVRQGCCLSPILFNLYSECLTKVALDGLEDFNIGGQIIHTVKYA
Ga0209738_101048782	3300027966	Termite Gut	VKSGRGIRQGCCLSPILFNLYSEYLTKEALEGLGDLKIG
Ga0209738_102559101	3300027966	Termite Gut	VNIGRGVRQGFCLSPILFNLYSECLTKEALEGFGNFKIGGQIIHTVQYADELVLLT
Ga0209738_104321551	3300027966	Termite Gut	VKIGRGVRQGRCLSPILFNLYSEYLTKEALEGLGDLKIGGQIIHTVKYADDLV
Ga0209738_104397511	3300027966	Termite Gut	VTRRTKIGRGVRKGCCLSPILFNLYSEYLTKEALKGFGDFKLRLVIHTLLYADDM
Ga0209629_100386011	3300027984	Termite Gut	VQIGRGDRQGCCLSPILFNLYSECLTKEALDGLGDFNIRGQIIQTVKYADDL
Ga0209629_107634591	3300027984	Termite Gut	VQIGRGVRQECCLSPILFKLYRECLIKEALDGLGDFNIGRQIIQTV
Ga0268261_103293472	3300028325	Termite Gut	METRSVNIGRGVRQGCCLSPILFNLYRECLTKEALVGFGVFKIGGQIIHTV
Ga0268261_104550001	3300028325	Termite Gut	VKIGRGVRQGCCLSPILFNLYSEYLTKEALEGLGDFKIGGQ
Ga0268261_104705011	3300028325	Termite Gut	VNIGRGVRQGCCLSPILFNLYSEYLTKEALEGLGDFKI
Ga0268261_105432983	3300028325	Termite Gut	VKTGRGVRKGCCLSPILFNLYSEYLTKEALEGLGDFKIGGQIIHTVKYAD
Ga0268261_106486641	3300028325	Termite Gut	VKTGRGVRQGCCLSPILFNLYSEYLTKEALEGLGDLKIGGQIIHT
Ga0268261_107817381	3300028325	Termite Gut	VKIGIGVRQGCCLSPILFNLYSEYLTKEALEGFGDFKIGGQIIHTVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097586

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences