Metagenome / Metatranscriptome Family F097717

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097717
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	106 residues
Representative Sequence	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Number of Associated Samples	70
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	33.65 %
% of genes from short scaffolds (< 2000 bps)	66.35 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.115 % of family members)
Environment Ontology (ENVO)	Unclassified (60.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (95.192 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.06% β-sheet: 4.35% Coil/Unstructured: 61.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03641	Lysine_decarbox	38.46
PF03992	ABM	3.85
PF00069	Pkinase	1.92
PF05015	HigB-like_toxin	0.96
PF00805	Pentapeptide	0.96
PF13614	AAA_31	0.96
PF01553	Acyltransferase	0.96
PF13505	OMP_b-brl	0.96
PF03544	TonB_C	0.96
PF01609	DDE_Tnp_1	0.96
PF03989	DNA_gyraseA_C	0.96
PF01047	MarR	0.96
PF12867	DinB_2	0.96
PF10282	Lactonase	0.96
PF07681	DoxX	0.96
PF12704	MacB_PCD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	38.46
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.69
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.96
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.96
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.96
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.96
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.96
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.96
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.96
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.96
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.96
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.46 %
Unclassified	root	N/A	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.77 %
Unclassified	root	N/A	1.92 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	0.96 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
Vibrio caribbeanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio caribbeanicus	0.96 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	0.96 %
Vibrio caribbeanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio caribbeanicus	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.77 %
Unclassified	root	N/A	1.92 %
Synechococcus sp. KORDI-49	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. KORDI-49	0.96 %
Vibrio caribbeanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio caribbeanicus	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100116677	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511	Open in IMG/M
3300003220\|JGI26342J46808_1001224	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300003350\|JGI26347J50199_1014702	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300003368\|JGI26340J50214_10119933	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300004080\|Ga0062385_10801489	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300004082\|Ga0062384_100367064	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300004091\|Ga0062387_100769537	Not Available	714	Open in IMG/M
3300004091\|Ga0062387_101108685	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300004092\|Ga0062389_100719176	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300004631\|Ga0058899_12264250	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005534\|Ga0070735_10008034	All Organisms → cellular organisms → Bacteria	8343	Open in IMG/M
3300005542\|Ga0070732_10047839	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300005591\|Ga0070761_10006568	All Organisms → cellular organisms → Bacteria	6709	Open in IMG/M
3300005602\|Ga0070762_10014152	All Organisms → cellular organisms → Bacteria	4061	Open in IMG/M
3300005602\|Ga0070762_11212501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio caribbeanicus	522	Open in IMG/M
3300005610\|Ga0070763_10090019	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300005921\|Ga0070766_10757722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. KORDI-49	660	Open in IMG/M
3300006176\|Ga0070765_100441391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300006176\|Ga0070765_100608208	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300006176\|Ga0070765_100728794	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300006176\|Ga0070765_101432906	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009759\|Ga0116101_1013670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1520	Open in IMG/M
3300010343\|Ga0074044_10000611	All Organisms → cellular organisms → Bacteria	34275	Open in IMG/M
3300010343\|Ga0074044_10031319	All Organisms → cellular organisms → Bacteria → Acidobacteria	3744	Open in IMG/M
3300010861\|Ga0126349_1021608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300011120\|Ga0150983_11766023	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300011120\|Ga0150983_15839918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300011120\|Ga0150983_16477014	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300014169\|Ga0181531_10000013	All Organisms → cellular organisms → Bacteria	185533	Open in IMG/M
3300019240\|Ga0181510_1252037	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300019268\|Ga0181514_1083281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300020579\|Ga0210407_10581675	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300020579\|Ga0210407_10675236	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300020581\|Ga0210399_10052177	All Organisms → cellular organisms → Bacteria	3286	Open in IMG/M
3300020581\|Ga0210399_11047347	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300020582\|Ga0210395_10000241	All Organisms → cellular organisms → Bacteria	42828	Open in IMG/M
3300020582\|Ga0210395_10008224	All Organisms → cellular organisms → Bacteria → Acidobacteria	7857	Open in IMG/M
3300020582\|Ga0210395_10237926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1368	Open in IMG/M
3300020583\|Ga0210401_10371934	All Organisms → cellular organisms → Bacteria → Acidobacteria	1291	Open in IMG/M
3300021168\|Ga0210406_10011746	All Organisms → cellular organisms → Bacteria → Acidobacteria	8521	Open in IMG/M
3300021168\|Ga0210406_11290221	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021170\|Ga0210400_10596209	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300021170\|Ga0210400_11077269	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300021171\|Ga0210405_10594277	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300021178\|Ga0210408_10065526	All Organisms → cellular organisms → Bacteria → Acidobacteria	2838	Open in IMG/M
3300021178\|Ga0210408_11360386	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300021180\|Ga0210396_10100588	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300021180\|Ga0210396_10426767	All Organisms → cellular organisms → Bacteria → Acidobacteria	1164	Open in IMG/M
3300021181\|Ga0210388_10106030	All Organisms → cellular organisms → Bacteria → Acidobacteria	2411	Open in IMG/M
3300021181\|Ga0210388_10383567	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300021401\|Ga0210393_10000175	All Organisms → cellular organisms → Bacteria	63178	Open in IMG/M
3300021401\|Ga0210393_10014703	All Organisms → cellular organisms → Bacteria	6062	Open in IMG/M
3300021401\|Ga0210393_11299364	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300021404\|Ga0210389_10047811	All Organisms → cellular organisms → Bacteria → Acidobacteria	3283	Open in IMG/M
3300021405\|Ga0210387_10058024	All Organisms → cellular organisms → Bacteria	3134	Open in IMG/M
3300021405\|Ga0210387_10293480	All Organisms → cellular organisms → Bacteria → Acidobacteria	1429	Open in IMG/M
3300021420\|Ga0210394_10009182	All Organisms → cellular organisms → Bacteria	10020	Open in IMG/M
3300021420\|Ga0210394_10093806	All Organisms → cellular organisms → Bacteria → Acidobacteria	2595	Open in IMG/M
3300021420\|Ga0210394_10244619	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300021420\|Ga0210394_10523170	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300021432\|Ga0210384_10022513	All Organisms → cellular organisms → Bacteria → Acidobacteria	6025	Open in IMG/M
3300021432\|Ga0210384_11584489	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300021479\|Ga0210410_10055066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3469	Open in IMG/M
3300021559\|Ga0210409_10589921	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300022512\|Ga0242676_1034672	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300022532\|Ga0242655_10153332	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300022711\|Ga0242674_1005347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300022711\|Ga0242674_1017811	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300022711\|Ga0242674_1065584	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300022713\|Ga0242677_1043852	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300022713\|Ga0242677_1072393	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300022714\|Ga0242671_1008281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300022715\|Ga0242678_1021003	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300022715\|Ga0242678_1067895	Not Available	547	Open in IMG/M
3300022716\|Ga0242673_1025878	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300022720\|Ga0242672_1149334	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300022721\|Ga0242666_1144232	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300022726\|Ga0242654_10174607	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300027074\|Ga0208092_111326	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300027174\|Ga0207948_1000781	All Organisms → cellular organisms → Bacteria → Acidobacteria	3220	Open in IMG/M
3300027565\|Ga0209219_1177921	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300027660\|Ga0209736_1040579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300027701\|Ga0209447_10000103	All Organisms → cellular organisms → Bacteria	20944	Open in IMG/M
3300027701\|Ga0209447_10148219	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300027729\|Ga0209248_10236280	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027768\|Ga0209772_10266017	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300027795\|Ga0209139_10001566	All Organisms → cellular organisms → Bacteria	8524	Open in IMG/M
3300027812\|Ga0209656_10058065	All Organisms → cellular organisms → Bacteria → Acidobacteria	2154	Open in IMG/M
3300027842\|Ga0209580_10025981	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300027855\|Ga0209693_10291297	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300027855\|Ga0209693_10386059	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027879\|Ga0209169_10076109	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300027884\|Ga0209275_10025220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2697	Open in IMG/M
3300027889\|Ga0209380_10347957	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300027908\|Ga0209006_10133950	All Organisms → cellular organisms → Bacteria → Acidobacteria	2182	Open in IMG/M
3300027986\|Ga0209168_10012525	All Organisms → cellular organisms → Bacteria	4993	Open in IMG/M
3300028906\|Ga0308309_10047019	All Organisms → cellular organisms → Bacteria → Acidobacteria	3084	Open in IMG/M
3300028906\|Ga0308309_10503478	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300028906\|Ga0308309_10509562	All Organisms → cellular organisms → Bacteria → Acidobacteria	1041	Open in IMG/M
3300029636\|Ga0222749_10477804	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300029636\|Ga0222749_10787215	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300030730\|Ga0307482_1084582	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031708\|Ga0310686_112756465	All Organisms → cellular organisms → Bacteria	16253	Open in IMG/M
3300031708\|Ga0310686_119350593	All Organisms → cellular organisms → Bacteria → Acidobacteria	2419	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.69%
Aquatic	Environmental → Aquatic	17.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.69%
Freshwater	Environmental → Aquatic → Freshwater	17.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Loam	Environmental → Terrestrial → Soil → Loam	25.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	16.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001166772	3300002245	Forest Soil	VKGIRPKLLFDYGGLKTLMGHKMEFSSARKTLLVGATLAGSFLLFGAPHSRADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAERAKLKIAREWCWEHGHRWWDEDARKWHTDRDWDEHDHDHPH*
JGI26342J46808_10012243	3300003220	Bog Forest Soil	MRHRTNFSPFGKMFFAAATLAGALMLSGAPQSRAEDCQQRIVKIDHELHKAAEKHGWDSPEVATKRAELNGARQWCWEHGHRWWDEDGQKWHTERDWDEHDHDHGPH*
JGI26347J50199_10147021	3300003350	Bog Forest Soil	MKKTLLVGATLCGSFLLLSAPKARAEDDCQKRVVKVDHELHKAAEKHGWDSPEAAAKRRELIAAREWCWEHGHRWWDEDGQRWHTDRDWDEHDHDHLPH*
JGI26340J50214_101199331	3300003368	Bog Forest Soil	RSLRSLWWRRRRKILMRHRTQFSLFRNTLLVGATLAGSFLLFGAPQSRAEDCQKRIMDIDHNLHKAAAKHGWDSPQAAEQRRALASAREWCWEHSHRWWDEDGRKWHTERDWDEHDHEHGS*
Ga0062385_108014891	3300004080	Bog Forest Soil	MDFSLFKKTLLVGATLAGSFLLFSAPQSRAEDCQKRIINIDHNLHKAAAKHGWDSPQVAEQRRALASAREWCWEHGHRWWDEDGQRWHTERDWDEHDHDHGR*
Ga0062384_1003670642	3300004082	Bog Forest Soil	MRHRMDFSLFKKTLLVGATLAGSFLLFSAPQSRAEDCQKRIINIDHNLHKAAAKHGWDSPQVAEQRRALASAREWCWEHGHRWWDEDGQRWHTERDWDEHDHDHGR*
Ga0062387_1007695372	3300004091	Bog Forest Soil	MKHRMEFSLLKKTMLVGATVAGSFMLLGAPHSRADEEDCQKRVVHIDHELHVAAEKHGWDSPQAQTQRAKLKVAREWCWEHGHRWWNEDDRRWHTDRDWDDHDHDHAPR*
Ga0062387_1011086851	3300004091	Bog Forest Soil	MRQFVDFSLLRKTLLVGATLAGSFLLLGAPQSRADDDDCQKRIFRIDHDLHKAAEKHGWDIPQAAEQCTALIAAREWCWEHSHRWWDEDTKRWHIERDWDEHDHDHPPR*
Ga0062389_1007191761	3300004092	Bog Forest Soil	MLMGHKTDFSFFRKTLLAAATLAGSLLLFGAPQTRAGDEDCQKRIIRVDHELHKEAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH*
Ga0058899_122642502	3300004631	Forest Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADEDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH*
Ga0070735_100080343	3300005534	Surface Soil	MAYRMEFSLLRKTLLVGATLVGSALLLGAPHARADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWSEDDRKWHTDRDWDDHDHDHPHDH*
Ga0070732_100478393	3300005542	Surface Soil	MAYRMEFSSLRKTLLVGATLVGSALLLGAPHARADEEDCQRRVVRIDHELHRAAAKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWSEDDRKWHTDRDWDDHDHDHPHDH*
Ga0070761_100065685	3300005591	Soil	MGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH*
Ga0070762_100141524	3300005602	Soil	MRHRTKFSFFGKMLLPGAVLAGTLMLSGAPQLRADEDCQKRIAKADHDLHKAAQDHGWDSPQAADRRRELAAARQWCWEHGRRWWDEDAQKWHTERDWDEHDHDHPPR*
Ga0070762_112125011	3300005602	Soil	MAHRMEISLFRKTLLLGVTLAGSAALLGAPHSRADEEDCQKRIVHIDHELHRAAEKHGWDSPEAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDWDEHDHDRDRPHDRDPH*
Ga0070763_100900194	3300005610	Soil	MGHKMDFSFFRKTLLAGATLAGSFLLFGAPPTRADDDDCQKRIVRIDHELHRAAGKHGWDSPQAAEKRRALVSAREWCWEHSHRWWDED
Ga0070766_107577221	3300005921	Soil	MRHRTKFSLFSKTLLLGAALAGTLMLSGAPQLRADDDCQKRIIKADHELHKAAQDHGWDSPQAADRRRELAAARAWCWEHGHRWWDEDAQKWHTERDWDEHDHDHPPR*
Ga0070765_1004413912	3300006176	Soil	MGHKLDSSFFRKILLPGATLAGSFLLLGAPQTRADEDCQKRIVRIDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDARKWHAERDWDEHDHDHDRH*
Ga0070765_1006082082	3300006176	Soil	MAHRMEISSFRKTLLLGVTLAGSAVLLGAPHSRADEEDCQKRIVHIDHELHRAAEKHGWDSPEAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDWDEHDHDRDRPHDRDPH*
Ga0070765_1007287942	3300006176	Soil	MGHKIDSSFFRKTLLLGATLAGSFLLLGAPQTRADEDCQKRIVRIDHELHRAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDTQKWHSERDWDEHDHDHPHDRN*
Ga0070765_1014329062	3300006176	Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDE
Ga0116101_10136703	3300009759	Peatland	RKNFTLFWKMFFAAATLAGALILSSAPQSRADECQDRIIKIDRELHKAAADHGWDSPQANEKRSELLGAREWCWEHSHRWWDEDGKRWHTEHDWDAHDHDHLPN*
Ga0074044_100006111	3300010343	Bog Forest Soil	MDFSLFKKTLLVGATLAGSFLLFGAPQSRAAEDDCQKRIIKIDHDLHRAAAEHGWDSPQAAEQRTALEVARESCWEHGHRWWDEDTKKWHTERDWDEHDHDHPPR*
Ga0074044_100313193	3300010343	Bog Forest Soil	MFFAAATLAGALMLSGAPQSRAEDCQQRIVKIDHELHKAAEKHGWDSPEVATKRAELNGARQWCWEHGHRWWDEDGQKWHTERDWDEHDHDHGPH*
Ga0126349_10216081	3300010861	Boreal Forest Soil	MGRKIDFSFFRKTLLAGATLAGSLLLFGTPEMRADHDDCQKRIVRIDHELHRAAEKHGWDSPQAAEKRRALVAEREWCWEHGHRWWDEDTRKWHSERDWDEHDHDRH*
Ga0150983_117660232	3300011120	Forest Soil	MDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH*
Ga0150983_158399182	3300011120	Forest Soil	MGHKTDFSFFRKTLLAAATLAGALLLFGAPQTRADEDDCQKRIIRVDHELHKAAEQHGWDSPQAAEKRRALVAAREWCWGHGHRWWDEDAQKWHSERDWDEHDHDRPHDR*
Ga0150983_164770141	3300011120	Forest Soil	MGHKTDFSFSRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRVIRIDHELHRAAVKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHDHPRDH*
Ga0181531_1000001319	3300014169	Bog	MRHRKNFTLFWKMFFAAATLAGALILSSAPQSRADECQDRIIKIDRELHKAAADHGWDSPQANEKRSELLGAREWCWEHSHRWWDEDGKRWHTEHDWDAHDHDHLPN*
Ga0181510_12520371	3300019240	Peatland	MRHRKNFTLFWKMFFAAATLAGALILSSAPQSRADECQDRIIKIDRELHKAAADHGWDSPQANEKRSELLGAREWCWEHSHRWWDEDGKRWHTEHDWDAHDHDHLPN
Ga0181514_10832811	3300019268	Peatland	LFWKMFFAAATLAGALILSSAPQSRADECQDRIIKIDRELHKAAADHGWDSPQANEKRSELLGAREWCWEHSHRWWDEDGKRWHTEHDWDAHDHDHLPN
Ga0210407_105816752	3300020579	Soil	MEFSLFKKALLVGATLAGSFLLFGPPQSRADDDDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210407_106752362	3300020579	Soil	MGHKTDFSFSRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRVIRIDHELHRAAVKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHDHPRDH
Ga0210399_100521773	3300020581	Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADEDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDED
Ga0210399_110473471	3300020581	Soil	ILLPGATLAGSFLLLGAPQTRADEDCQKRIVRIDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDARKWHAERDWDEHDHDHDRH
Ga0210395_1000024127	3300020582	Soil	MRHRTKSSFFGKTLLLGATLAGTLMLSGAPQLRADDDCQKRIAKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWEHGRRWWDEDAQKWHTEHDWDEHDHDHPPR
Ga0210395_100082249	3300020582	Soil	MGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0210395_102379262	3300020582	Soil	MRHCMEFSLFKKALLVGATLAGSFLLFGTPQSRAADEDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210401_103719342	3300020583	Soil	MRHSMEFSLFKKALLVGATLAGSFLLFGPPQSRADDDDCQKRIIRIDHDLHKAAERHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210406_1001174611	3300021168	Soil	MRHCMEFSLFKKALLVGATLAGSFLLFGPPQSRADDDDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210406_112902212	3300021168	Soil	MGHKMDFSFFRKTLLAGATLAGSFLLFGVPQTRADDDDCQKRVVRIDHELHRAAQKHGWDSAQAAEKRRALVSAREWCWEHSHRWWDEDGRK
Ga0210400_105962092	3300021170	Soil	VKGIRPKLLFDYGGLKTLMGHKMEFSSARKTLLVGATLAGSFLLFGAPHSRADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWDEDGRKWHTDRDWDEHDHDHDHPH
Ga0210400_110772692	3300021170	Soil	MAHRMEVSVFTKTLLIGVTLAGSAVLLGAPHSRADEEDCQKRVVHIDHELHRAAEKHGWDSPQAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDW
Ga0210405_105942772	3300021171	Soil	MGHKTDFSFFRKTLLAAATLAGALLLFGAPQTRADEDDCQKRIIRVDHELHKAAEQHGWDSPQAAEKRRALVAAREWCWGHGHRWWDEDAQKWHSERDWDEHDHDRPHDR
Ga0210408_100655263	3300021178	Soil	MRHYMEFSLFKKALLVGATLTGSFLLFGAPQSRADDDDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210408_113603861	3300021178	Soil	LGVTLAGSAVLLGAPHSRADEEDCQKRIVHIDHELHRAAEKHGWDSPEAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDWDEHDHDRDRPHDRDPH
Ga0210396_101005882	3300021180	Soil	MRHRTKSSFFSKTLLLGATLAGTLMLSGAPQLRADDDCQKRIAKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWEHGRRWWDEDAQKWHTEHDWDEHDHDHPPR
Ga0210396_104267672	3300021180	Soil	MVHRIDVSLFRNALLVGVALAGSALLLGAPHSRADEEDCQKRIVRIDHELHRDAEKHGWDSPQANEKRRALVAAREWCWEHGHRWWDEDAKRWHTERDWDEHDHDRDRPRDPH
Ga0210388_101060305	3300021181	Soil	MRHCMEFSLFKKALLVGATLAGSFLLFGPPQSRADDDDCQKRIIRIDHDLHKAAERHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210388_103835672	3300021181	Soil	MRHRTKSSLFSKTLLLGATLAGTLMLSGAPQLRADDDCQKRIAKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWEHGRRWWDEDAQKWHTEHDWDEHDHDHPPR
Ga0210393_1000017528	3300021401	Soil	MRHRTKSSFFGKTLLLGATLAGTLMLSGAPQLRADEDCQKRIAKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWEHGRRWWDEDAQKWHTERDWDEHDHDHPPR
Ga0210393_100147031	3300021401	Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADEDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0210393_112993642	3300021401	Soil	MGHKTDFSFSRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRVIRIDHELHRAAVKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHGHP
Ga0210389_100478112	3300021404	Soil	MGHTPKFSTLKKTLLIGATIAGSAMLLGAPKSRAANEEDCQKRVVRIDHELHKAAEKHGWDSPEVREKRRDLVAAREWCWEHGHRWWDEDGQKWHTERDWDEHDHEHPPR
Ga0210387_100580245	3300021405	Soil	MRHYMEFSLFKKALLVGATLAGSFLLFGPPQSRADDDDCQKRIIRIDHDLHKAAERHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210387_102934801	3300021405	Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0210394_100091821	3300021420	Soil	MGHKKDFSFFRKTLLAGATLAGSLLLFGAPQTRADDDDCQKRISRVDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWW
Ga0210394_100938065	3300021420	Soil	MGHEIGFSFFRKTLLLGATLGGSFLLFGAPQTRADEDDCQKRVVRIDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDRDRPHDHDRH
Ga0210394_102446193	3300021420	Soil	MRHCAEFSFVRKTLLVGATLAGTFLLFGAAQSQAEDCQKRIINIDHNLHKAAEKHGWDSPQVAEQRRALAAAREWC
Ga0210394_105231702	3300021420	Soil	MEFSLFKKALLVGATLAGSFLLFGTPQSRAADEDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210384_100225133	3300021432	Soil	MAHRMEVSVFTKTLLIGVTLAGSAVLLGAPHSRADEEDCQKRVVHIDHELHRAAEKHGWDSPQAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDWDEHDHDRDRPHDRDPH
Ga0210384_115844891	3300021432	Soil	MGHKMDFSFFRKTLLAGATLAGSFLLFGAPPTRADDDDCQKRIVRIDHELHRAAGKHGWDSPQAAEKRRALVSAREWCWEHSHRWWDEDGRKWHSDRDWDEHD
Ga0210410_100550662	3300021479	Soil	MRHYMEFSLFKKALLVGATLAGSFLLFGAPQSRADDDDCQKRIIRIDHDLHKAAERHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0210409_105899211	3300021559	Soil	MEFSLFKKALLVGATLAGSFLLFGAPQSRADDDDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLER
Ga0242676_10346721	3300022512	Soil	KKTLMGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0242655_101533322	3300022532	Soil	LAGATLAGSLLLFGAPQTRADDDDCQKRISRVDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHDHPRDH
Ga0242674_10053471	3300022711	Soil	EEKKLMGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0242674_10178111	3300022711	Soil	KTLMGHKTDFSFFRKTLLAAATLAGALLLFGAPQTRADEDDCQKRIIRVDHELHKAAEQHGWDSPQAAEKRRALVAAREWCWGHGHRWWDEDAQKWHSERDWDEHDHDRPHDR
Ga0242674_10655841	3300022711	Soil	LLFDYGGLKTLMGHKMEFSSARKTLLVGATLAGSFLLFGAPHSRADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWDEDGRKWHTDRDWDEHDHDHDHP
Ga0242677_10438521	3300022713	Soil	LLFDYGGLKTLMGHKMEFSSARKTLLVGATLAGSFLLFGAPHARADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWDEDGRKWHTDRDWDEHDHDHDHP
Ga0242677_10723932	3300022713	Soil	REEKKLMGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHDHPRDH
Ga0242671_10082811	3300022714	Soil	EKKLMGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0242678_10210032	3300022715	Soil	LMGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRDLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0242678_10678951	3300022715	Soil	PMRHRTKSSFFGKTLLLGATLAGTLMLSGAPQLRADDDCQKRIAKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWEHGRRWWDEDAQKWHTEHDWDEHDHDHPPR
Ga0242673_10258781	3300022716	Soil	VLAGATLAGSFLLFGLPQTRADEDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDHPRDH
Ga0242672_11493341	3300022720	Soil	LFDYGGLKTLMGHKMEFSSARKTLLVGATLAGSFLLFGAPHARADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWDEDGRKWHTDRDWDEHDHDHPH
Ga0242666_11442322	3300022721	Soil	MGHKTDFSFFRKTLLATATLAGSLLLFGAPQTRAADEDCQKRIIRVDHELHKAAEKHGWDSPQAAEKRRALVAAREWCWGHGHRWWDEDAQKWHSERDWDEHDHDRPHDR
Ga0242654_101746072	3300022726	Soil	FSFFRKTLLLGATLGGSFLLFGAPQTRADEDDCQKRVVRIDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDGQKWHAERDWDEHDHDHPRDH
Ga0208092_1113261	3300027074	Forest Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGAPQTRADDNDCRKRIIRVDHELHRAAEKHGWDSPQAAEKRRALVAAR
Ga0207948_10007812	3300027174	Forest Soil	MLRCMEFSLFKKTLLVGATLAGSFLLFGAPQSRADDDDCQKRIIRIDHDLHKAAERHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHDHPPR
Ga0209219_11779211	3300027565	Forest Soil	MEHGMEFSFLRKAVLLGATLVGSALLLGAPHARADEEDCQRRVVRIDHELHRAAAKHGWDSPQAEAQRAKLKIAREWCWEHSHRWWDEDGRKWHTDRDWDEHDHDRDRPHDHD
Ga0209736_10405792	3300027660	Forest Soil	MGHKMEFSLARKTLLVGATLVGSILLFGAPHARADEEDCQKRIVRVDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDAQKWHSERDWDEHDHDRDRPHDHDRH
Ga0209447_1000010317	3300027701	Bog Forest Soil	MRHRTNFSPFGKMFFAAATLAGALMLSGAPQSRAEDCQQRIVKIDHELHKAAEKHGWDSPEVATKRAELNGARQWCWEHGHRWWDEDGQKWHTERDWDEHDHDHGPH
Ga0209447_101482192	3300027701	Bog Forest Soil	MRHRMDFSLFKKTLLVGATLAGSFLLFSAPQSRAEDCQKRIINIDHNLHKAAAKHGWDSPQVAEQRRALASAREWCWEHGHRWWDEDGQRWHTERDWDEHDHDHGR
Ga0209248_102362801	3300027729	Bog Forest Soil	MRHRMDFSLFKKTLLVGATLAGSFLLFSAPQSRAEDCQKRIINIDHNLHKAAAKHGWDSPQVAEQRRALASAREWCWEHGHR
Ga0209772_102660171	3300027768	Bog Forest Soil	MRHRMDFSLFKKTLLVGATLAGSFLLFSAPQSRAEDCQKRIINIDHNLHKAAAKHGWDSPQVAEQRRALASARERCWEHGHRWWDEDSRKWHTERDWDEHDHEHGN
Ga0209139_100015666	3300027795	Bog Forest Soil	MQNRTGFSFMKKTLLVGATLCGSFLLLSAPKARAEDDCQKRVVKVDHELHKAAEKHGWDSPEAAAKRRELIAAREWCWEHGHRWWDEDGQRWHTDRDWDEHDHDHLPH
Ga0209656_100580654	3300027812	Bog Forest Soil	MRHRTQFSLFRNTLLVGATLAGSFLLFGAPQSRAEDCQKRIMDIDHNLHKAAAKHGWDSPQAAEQRRALASAREWCWEHSHRWWDEDGRKWHTERDWDEHDHEHGS
Ga0209580_100259813	3300027842	Surface Soil	MAYRMEFSSLRKTLLVGATLVGSALLLGAPHARADEEDCQRRVVRIDHELHRAAAKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWSEDDRKWHTDRDWDDHDHDHPHDH
Ga0209693_102912972	3300027855	Soil	MGYKMEFSLIRKMLLVGATLAGSFLLFGAPHSRADEEDCQRRVVRIDHDLHRAAAKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWNEDDRKWHSERDWDEHDHDHDRPH
Ga0209693_103860592	3300027855	Soil	MRHCTESFLRKTLFVGATLAGSFLLFSAPQSRADDDCQKRVVRVDHELHKAAEKHGWDSPEAAAKRRELVAAREWCWEHGHRWW
Ga0209169_100761091	3300027879	Soil	MRHRTKFSLFSKTLLLGAALAGTLMLSGAPQLRADDDCQKRIIKADHELHKAAQDHGWDSPQAADRRRELAAAREWCWGHGHRWWDEDAQKW
Ga0209275_100252201	3300027884	Soil	MRHRTKFSFFGKMLLPGAVLAGTLMLSGAPQLRADEDCQKRIAKADHDLHKAAQDHGWDSPQAADRRRELAAARQWCWEHGRRWWDEDAQKWHTERDWDEHDHDHPPR
Ga0209380_103479571	3300027889	Soil	MRHRTKFSLFSKTLVLGAALAGTLMLSGAPQLRADDDCQKRIIKADHELHKAAQDHGWDSPQAADRRRELAAARAWCWEHGHRWWDEDAQKWHTERDWDEHDHDHPPR
Ga0209006_101339502	3300027908	Forest Soil	MGHKMEFSSARKTLLVGATLAGSFLLFGAPHSRADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAERAKLKIAREWCWEHGHRWWDEDGRKWHTDRDWDEHDHDHPH
Ga0209168_100125254	3300027986	Surface Soil	MAYRMEFSLLRKTLLVGATLVGSALLLGAPHARADEEDCQRRVVRIDHELHRAAEKHGWDSPQAEAQRAKLKIAREWCWEHGHRWWSEDDRKWHTDRDWDDHDHDHPHDH
Ga0308309_100470194	3300028906	Soil	MRHCMEFSLFRKTLLVGATLAGSLLLLGTPRASAEDCQQRIVHIDHELHKAAEKHGWDSPQVASKRRELIAAREWCWEHGHRWWDEDSQRWHTDRDWDEHDHDHPPH
Ga0308309_105034782	3300028906	Soil	MGHKLDSSFFRKILLPGATLAGSFLLLGAPQTRADEDCQKRIVRIDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDARKWHAERDWDEHDHDHDRH
Ga0308309_105095622	3300028906	Soil	MAHRMEISSFRKTLLLGVTLAGSAVLLGAPHSRADEEDCQKRIVHIDHELHRAAEKHGWDSPEAKEKRRALIAAREWCWEHGHRWWDEDAQRWHTERDWDEHDHDRDRPHDRDPH
Ga0222749_104778041	3300029636	Soil	MRHCMEFSLFKKALLVGATLAGSFLLFGTPQSRAADEDCQKRIIRIDHDLHKAAEKHGWDSPQAAEQRTALIAAREWCWEHSHRWWDEDTRKWHLERDWDEHDHD
Ga0222749_107872152	3300029636	Soil	MGHKMDFSFFRKTLLAGATLAGSFLLFGVPQARADDDDCQKRVVRIDHELHRAAQKHGWDSAQAAEKRRALVSAREWCWEHSHRWWDEDGRKWHS
Ga0307482_10845822	3300030730	Hardwood Forest Soil	MVHRIDVSLFRNALLVGVALAGSALLLGAPHSRADEEDCQKRIVRIDHELHRDAEKHGWDSPQANEKRRALVAAREWCWEHGHRWWDEDAKRWHTERDWDEHDHDRDRPHDPH
Ga0310686_11275646510	3300031708	Soil	MGHKTDFSFFRKTLLAGATLAGSFLLFGLPQTRADDDDCQKRIIRIDHELHRAAVKHGWDSPQAAEKRRTLVAAREWCWEHGHRWWDEDAQKWHAERDWDEHDHDHPRDH
Ga0310686_1193505934	3300031708	Soil	MGYKMEFSLARKTLLVGTALVGSFLLFGAPHARADEEDCQKRIVRVDHELHRAAEKHGWDSPQAAEKRRALVAAREWCWEHGHRWWDEDGQKWHTERDWDEHDHDHDRPHDH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097717

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences