Metagenome / Metatranscriptome Family F097729

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097729
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	70 residues
Representative Sequence	MRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLIVAVIVLFPAAMKWIWHHKTTPHGQQNR
Number of Associated Samples	65
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	18.27 %
% of genes from short scaffolds (< 2000 bps)	69.23 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.462 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (26.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.18% β-sheet: 0.00% Coil/Unstructured: 40.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01145	Band_7	43.27
PF13174	TPR_6	2.88
PF00188	CAP	1.92
PF12704	MacB_PCD	1.92
PF02627	CMD	0.96
PF13564	DoxX_2	0.96
PF02812	ELFV_dehydrog_N	0.96
PF10079	BshC	0.96
PF03551	PadR	0.96
PF00829	Ribosomal_L21p	0.96
PF07991	IlvN	0.96
PF02548	Pantoate_transf	0.96
PF01743	PolyA_pol	0.96
PF13500	AAA_26	0.96
PF13620	CarboxypepD_reg	0.96
PF08327	AHSA1	0.96
PF00005	ABC_tran	0.96
PF16640	Big_3_5	0.96
PF07589	PEP-CTERM	0.96
PF07676	PD40	0.96
PF02403	Seryl_tRNA_N	0.96
PF00069	Pkinase	0.96
PF02687	FtsX	0.96
PF07690	MFS_1	0.96
PF08734	GYD	0.96
PF10009	DUF2252	0.96
PF01592	NifU_N	0.96
PF00326	Peptidase_S9	0.96
PF11731	Cdd1	0.96
PF13490	zf-HC2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.92
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.92
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.96
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.96
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.96
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.96
COG0617	tRNA nucleotidyltransferase/poly(A) polymerase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.96
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	14.42 %
Unclassified	root	N/A	11.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.42 %
Unclassified	root	N/A	11.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.42 %
Unclassified	root	N/A	11.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.42 %
Unclassified	root	N/A	11.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1023604	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300001546\|JGI12659J15293_10000133	All Organisms → cellular organisms → Bacteria	22907	Open in IMG/M
3300001546\|JGI12659J15293_10059705	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300001593\|JGI12635J15846_10112453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1935	Open in IMG/M
3300002245\|JGIcombinedJ26739_100111495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2569	Open in IMG/M
3300004080\|Ga0062385_10052671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1769	Open in IMG/M
3300004080\|Ga0062385_10143372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300004082\|Ga0062384_100083198	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300004082\|Ga0062384_100289684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300004091\|Ga0062387_100204423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1195	Open in IMG/M
3300004092\|Ga0062389_100480337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1385	Open in IMG/M
3300004092\|Ga0062389_101123688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	971	Open in IMG/M
3300004092\|Ga0062389_101711990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300004092\|Ga0062389_103072190	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005436\|Ga0070713_100981827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	814	Open in IMG/M
3300005541\|Ga0070733_10752764	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005591\|Ga0070761_10000728	All Organisms → cellular organisms → Bacteria	20920	Open in IMG/M
3300005591\|Ga0070761_10454276	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006176\|Ga0070765_100208593	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300006893\|Ga0073928_10000875	All Organisms → cellular organisms → Bacteria → Acidobacteria	63008	Open in IMG/M
3300006893\|Ga0073928_10002646	All Organisms → cellular organisms → Bacteria	30181	Open in IMG/M
3300006893\|Ga0073928_10011796	All Organisms → cellular organisms → Bacteria	10140	Open in IMG/M
3300006893\|Ga0073928_10193818	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300009628\|Ga0116125_1054276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1024	Open in IMG/M
3300011120\|Ga0150983_13170132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	605	Open in IMG/M
3300014156\|Ga0181518_10093595	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300014169\|Ga0181531_10114624	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300014489\|Ga0182018_10000237	All Organisms → cellular organisms → Bacteria → Acidobacteria	72694	Open in IMG/M
3300014489\|Ga0182018_10001955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21918	Open in IMG/M
3300014489\|Ga0182018_10002295	All Organisms → cellular organisms → Bacteria → Acidobacteria	19485	Open in IMG/M
3300014489\|Ga0182018_10093913	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300014495\|Ga0182015_10005935	All Organisms → cellular organisms → Bacteria → Acidobacteria	12470	Open in IMG/M
3300014495\|Ga0182015_10007337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10769	Open in IMG/M
3300014495\|Ga0182015_10027015	All Organisms → cellular organisms → Bacteria	4513	Open in IMG/M
3300014495\|Ga0182015_10103615	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300014495\|Ga0182015_10217239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1272	Open in IMG/M
3300014501\|Ga0182024_10164224	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300014501\|Ga0182024_11170318	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300016730\|Ga0181515_1349480	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300017927\|Ga0187824_10145661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300018042\|Ga0187871_10739226	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300018047\|Ga0187859_10051473	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300019786\|Ga0182025_1117290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1992	Open in IMG/M
3300020579\|Ga0210407_10011847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6485	Open in IMG/M
3300020583\|Ga0210401_10040469	All Organisms → cellular organisms → Bacteria	4419	Open in IMG/M
3300021170\|Ga0210400_10065935	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300021171\|Ga0210405_10487920	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300021178\|Ga0210408_10864890	Not Available	705	Open in IMG/M
3300021181\|Ga0210388_10652303	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300021401\|Ga0210393_11567386	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300021420\|Ga0210394_10259528	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300021420\|Ga0210394_10966580	Not Available	739	Open in IMG/M
3300021420\|Ga0210394_11573049	Not Available	554	Open in IMG/M
3300021432\|Ga0210384_10481691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300021433\|Ga0210391_10140649	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300022521\|Ga0224541_1030190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	584	Open in IMG/M
3300022557\|Ga0212123_10002630	All Organisms → cellular organisms → Bacteria → Acidobacteria	41706	Open in IMG/M
3300022557\|Ga0212123_10004264	All Organisms → cellular organisms → Bacteria	27714	Open in IMG/M
3300022557\|Ga0212123_10301078	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300022840\|Ga0224549_1020804	Not Available	906	Open in IMG/M
3300022873\|Ga0224550_1003280	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300023250\|Ga0224544_1044073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	637	Open in IMG/M
3300027432\|Ga0209421_1007233	All Organisms → cellular organisms → Bacteria → Acidobacteria	2084	Open in IMG/M
3300027545\|Ga0209008_1000287	All Organisms → cellular organisms → Bacteria	20290	Open in IMG/M
3300027648\|Ga0209420_1045592	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300027648\|Ga0209420_1071392	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300027648\|Ga0209420_1158867	Not Available	616	Open in IMG/M
3300027701\|Ga0209447_10078364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	907	Open in IMG/M
3300027701\|Ga0209447_10121667	Not Available	717	Open in IMG/M
3300027729\|Ga0209248_10043261	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300027729\|Ga0209248_10222878	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027737\|Ga0209038_10023873	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300027767\|Ga0209655_10027851	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300027829\|Ga0209773_10208332	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300027853\|Ga0209274_10003590	All Organisms → cellular organisms → Bacteria	7398	Open in IMG/M
3300027853\|Ga0209274_10225855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	956	Open in IMG/M
3300027879\|Ga0209169_10116377	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300027895\|Ga0209624_10000076	All Organisms → cellular organisms → Bacteria	90990	Open in IMG/M
3300027895\|Ga0209624_10906465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	575	Open in IMG/M
3300027908\|Ga0209006_10157996	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300028023\|Ga0265357_1006484	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300028795\|Ga0302227_10303487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	607	Open in IMG/M
3300028798\|Ga0302222_10051632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1667	Open in IMG/M
3300028800\|Ga0265338_10036162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4732	Open in IMG/M
3300028800\|Ga0265338_10741568	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300028906\|Ga0308309_10819069	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	809	Open in IMG/M
3300028906\|Ga0308309_11042398	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300030007\|Ga0311338_11813730	Not Available	549	Open in IMG/M
3300030687\|Ga0302309_10549065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	547	Open in IMG/M
3300030693\|Ga0302313_10468482	Not Available	500	Open in IMG/M
3300030906\|Ga0302314_11106899	Not Available	752	Open in IMG/M
3300031027\|Ga0302308_10375544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	859	Open in IMG/M
3300031090\|Ga0265760_10014232	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300031234\|Ga0302325_11808672	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031708\|Ga0310686_102952001	Not Available	602	Open in IMG/M
3300031708\|Ga0310686_106957561	All Organisms → cellular organisms → Bacteria	6397	Open in IMG/M
3300031708\|Ga0310686_110519224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	839	Open in IMG/M
3300031708\|Ga0310686_110837232	All Organisms → cellular organisms → Bacteria	19252	Open in IMG/M
3300031708\|Ga0310686_110957467	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300031708\|Ga0310686_111755817	Not Available	544	Open in IMG/M
3300031708\|Ga0310686_111778077	All Organisms → cellular organisms → Bacteria → Proteobacteria	4432	Open in IMG/M
3300031708\|Ga0310686_111834627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2820	Open in IMG/M
3300031708\|Ga0310686_111951969	Not Available	834	Open in IMG/M
3300031708\|Ga0310686_117527759	All Organisms → cellular organisms → Bacteria	16382	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.27%
Aquatic	Environmental → Aquatic	28.85%
Plants	Host-Associated → Plants	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.73%
Freshwater	Environmental → Aquatic → Freshwater	22.12%
Peat	Environmental → Terrestrial → Peat	11.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.12%
Loam	Environmental → Terrestrial → Soil → Loam	22.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.58%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	8.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	6.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10236041	3300001084	Forest Soil	MRESFVYAALVLVVFGALYLVTQGMNLMNQPSDLKLAGGIGLIVVVIVLFLAAIRWIWHHKTTPHNRLYR*
JGI12659J15293_1000013313	3300001546	Forest Soil	MRERFVYAALVLVIFGAIYLVTEGMNLINQPSNLKVAGGIGLIIAVFVMFPAAMRWIWHHKTTPHNQLNQSER*
JGI12659J15293_100597052	3300001546	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVIVLFPAAMKWIWHHKTTRHDPSNQ*
JGI12635J15846_101124533	3300001593	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVFVLFPTAMRWIWHHKTTPHDPPNR*
JGIcombinedJ26739_1001114953	3300002245	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVIVLFLAAMKWIWHHKTTRHDPSNQ*
Ga0062385_100526712	3300004080	Bog Forest Soil	MRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLIVAVIVLFPAAMKWIWHHKTTPHGQQNR*
Ga0062385_101433721	3300004080	Bog Forest Soil	MAMRESFVYAALVLVVCGGIYLITQGMNLLNQPSDFKVAAGVGLILVVFVLFPAAMRWIWHHKTTPHNPPNR*
Ga0062384_1000831983	3300004082	Bog Forest Soil	MAMRERFVYAALVLVVCGAIYLITQGLNLINQPSDLKVAGGVALIIAVFVLFPAALRWIWHHKTTPHGQENRQEKE*
Ga0062384_1002896842	3300004082	Bog Forest Soil	MAMRESFVYAALVLVVCGGIYLITQGMNLLNQPSDFKVAAGVGLILVVFVLFPAAMRWIWHH
Ga0062387_1002044233	3300004091	Bog Forest Soil	MREGFVYAALFLVICGAVYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQL
Ga0062389_1004803372	3300004092	Bog Forest Soil	MREGFVYAALFLVICGAVYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR*
Ga0062389_1011236882	3300004092	Bog Forest Soil	MRESFVYATLVLVVCGAVYLVTQGMNLLNQPSDLKVAGGVGLIAVVLILFPAAMKWILHHKSTPHRN*
Ga0062389_1017119902	3300004092	Bog Forest Soil	MRDSFVYAALILVICGAVYLGTQALNLLNQPSDLKVAAGVGLIVVVVVLFPAAMRWIWHHKTTPHRLLNR*
Ga0062389_1030721901	3300004092	Bog Forest Soil	MRDSFVYAALILVVCGAIYLVTQAMNLLNQPSDLKVAGGIGLIVAVILLFPAAVRWIWHHKTTPHNVLDR*
Ga0070713_1009818271	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MREKFVYAALILVICGAIYLVTKGLDLLNQPSDLKVAGGVGVIVAVILLFPAAIKWIWHHKTTPHNPPTR*
Ga0070733_107527642	3300005541	Surface Soil	MRERFVYAALILVICGTIYLGTKGLNLLNQPSDLKVAEGVGVIVAVLLLFPAAIRWIWHHKTTPHNPPNR*
Ga0070761_1000072817	3300005591	Soil	MREGFVYAALFLVICGAVYLVTQELNLLNQPSDLKVAGGVGLIVVVVVLFPAAMRWIWHHKTTPHNQLNR*
Ga0070761_104542762	3300005591	Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVVVLFPTAMKWIWHHKTTPHDPPSR*
Ga0070765_1002085932	3300006176	Soil	MRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLVVAVVVLFPAAMKWIWHHKTTPHGQQNR*
Ga0073928_1000087530	3300006893	Iron-Sulfur Acid Spring	MREGFVYAALFLVICGAIYLVTQGLNLLNQPSDVKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR*
Ga0073928_1000264610	3300006893	Iron-Sulfur Acid Spring	MREGFVYAALVLVIFGAIYLVTQGLNLINQPSDLKVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGPLAR*
Ga0073928_100117969	3300006893	Iron-Sulfur Acid Spring	MLDMVSERIEAKTAMREGFVYAALVLVICGAIYLITQGLNLINQPSDLKVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGPLAR*
Ga0073928_101938181	3300006893	Iron-Sulfur Acid Spring	IAFPNKRSFEAQEAMRERFVYAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVALIVAVMVLFPAALKWIWHHKTTPHSQLNR*
Ga0116125_10542762	3300009628	Peatland	VTEAQKAMRERFVYAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVGLIVLVFVLFPAALKWIWHHKTTPHGQQNL*
Ga0150983_131701322	3300011120	Forest Soil	MREGFVYAALFLVICGAVYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAAMRWIWHHKTTPHNQLNR*
Ga0181518_100935952	3300014156	Bog	MREGFVYAALFLVICGAVYLVTQGLDLLNQPSDLKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR*
Ga0181531_101146242	3300014169	Bog	MRDSFVYAALLLVICGAVYLVTEAMNLLNQPSDWKVAGGIGLLIAVVVLFPAAMRWIWHHKTTPHRLLNR*
Ga0182018_1000023762	3300014489	Palsa	LVLVVCGAIYLVTQGMNLINQPSDLKVAGGIGLIILVIVLFPAALRWIWHHKTTPHGQPNR*
Ga0182018_100019554	3300014489	Palsa	MRERFVYATLVLVICGAIYLVTQGLNLLNQPSDLKVAGGVGLIVVVIVLFPAAMKWIWHHKTTPHNQPNR*
Ga0182018_1000229510	3300014489	Palsa	VICGAIYLITQGMNLINQPSNLKVAGGIGLIVAVFVLFPAAMRWIWHHKTTPHNQLNQ*
Ga0182018_100939132	3300014489	Palsa	MRERFVYAALVLVICGAIYLVTQGLNLLNQPSDLKVAGGVGLIVVVIVLFPAAMKWIWHHKTTPHSQPNR*
Ga0182015_100059358	3300014495	Palsa	MRERFVYAALVLVVCGAIYLVTQGMNLINQPSDLKVAGGIGLIILVIVLFPAALRWIWHHKTTPHGQPNR*
Ga0182015_100073378	3300014495	Palsa	MRERFVYAALVLVICGAIYLITQGMNLINQPSNLKVAGGVGLIVAVFVLFPAAMRWIWHHKTTPHNQLNQSER*
Ga0182015_100270152	3300014495	Palsa	MRERFVYATLVLVICGAIYLVTQGLNLLNQPSDLKVAGGVGLIVVVIVLFPAAMKWIWHHKTTPHSQPNR*
Ga0182015_101036152	3300014495	Palsa	MRERFVYAALVLVICGVIYLVTQGLNLINQPSDLKVAGGVGLIVVVIVLFPAALKWIWHHKTTPHSQLNR*
Ga0182015_102172392	3300014495	Palsa	MRERFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGIGLIVAVIVLFPAAIRWIWHHKTTPHSQLHSMGEKR*
Ga0182024_101642243	3300014501	Permafrost	MREHFVYAALVLVICGAIYLVTQGLNLMNQPSDLKVAGGVALIVAVFVLFPTAMRWIWHHKTTPHDPPNR*
Ga0182024_111703182	3300014501	Permafrost	MRESFVYAALFLVICGGIYLVTQGLNLINQPSDLKVAGGVGLILMVIVLFPAAMKWIWHHKTTPHRDLNR*
Ga0181515_13494801	3300016730	Peatland	MREGFVYAALFLVICGAVYLVTQGLDLLNQPSDLKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR
Ga0187824_101456612	3300017927	Freshwater Sediment	MRKSFVYMALVAVICAGIYLLTEAMNLLNQPSDWKVASGVGLIVVVIVFFPPAMRWIWHRRTRPYGQLKSIGERR
Ga0187871_107392262	3300018042	Peatland	MRDSFVYAALLLVICGAVYLATSAMNLLNQPSDWKVAGGVGLLIAVIVLFPAAMRWIWHHKTTPHRLLNR
Ga0187859_100514732	3300018047	Peatland	MRERFVYAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVGLIVLVFVLFPAALKWIWHHKTTPHGQQNL
Ga0182025_11172902	3300019786	Permafrost	MRERFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVIVLFPAAIRWIWHHKTTPHSQLHSIGEKR
Ga0210407_100118475	3300020579	Soil	MLDMVSERIEAKTAMREGFVYAALVLVICGAIYLITQGLNLINQPSDLKVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGPLAR
Ga0210401_100404695	3300020583	Soil	MREGFVYAALFLVICGAVYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAAMRWIWHHKTTPHNQLNR
Ga0210400_100659353	3300021170	Soil	MVSERIEAKTAMREGFVYAALVLVICGAIYLITQGLNLINQPSDLKVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGPLAR
Ga0210405_104879202	3300021171	Soil	MRERFVYAALILVICGAIYLVTKGLNLLNQPSDLKVAEGVALIVAVVVLFPAAMKWIWHHKTTPHYPPNR
Ga0210408_108648902	3300021178	Soil	MREKFVYAALILVICGAIYLVTKGLDLLNQPSDLKVAGGVGVIVTVILLFPAAIKWIWHHKTTPHNPPTR
Ga0210388_106523032	3300021181	Soil	MRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLVVAVVVLFPAAMKWIWHHKTTPHGQQNR
Ga0210393_115673862	3300021401	Soil	QNRTEAEKTMRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLVVAVVVLFPAAMKWIWHHKTTPHGQQNR
Ga0210394_102595282	3300021420	Soil	MREKFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVFVLFPAAMKWIWHHKTTPHGQQNR
Ga0210394_109665801	3300021420	Soil	MRERFVYAALVLVVFGAIYLVTQGLNLINQPSDLKVAGGVGLIVVVIVLFPAAMKWIWHHKTTPHNQPNR
Ga0210394_115730491	3300021420	Soil	MRERFVYAALILVICGAIYLVTKGLNLLNQPSDLKVAEGVALIAAVVVLFPAAMKWIWHHKTTPHNPPNR
Ga0210384_104816911	3300021432	Soil	MRERFVYAALILVICGAIYLVTKGLNLLNQPSDLKVAEGVALIVAVVVLFPAAMKWIWHHKTTPHNPPNR
Ga0210391_101406492	3300021433	Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVIVLFPAAMKWIWHHKTTRHDPSNQ
Ga0224541_10301902	3300022521	Soil	FVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVILLFPAAMKWIWHHKTTPHN
Ga0212123_1000263017	3300022557	Iron-Sulfur Acid Spring	MREGFVYAALFLVICGAIYLVTQGLNLLNQPSDVKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR
Ga0212123_100042644	3300022557	Iron-Sulfur Acid Spring	MREGFVYAALVLVIFGAIYLVTQGLNLINQPSDLKVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGPLAR
Ga0212123_103010782	3300022557	Iron-Sulfur Acid Spring	VVCGAIYLVTQGLNLINQPSDLKVAGGVALIVAVMVLFPAALKWIWHHKTTPHSQLNR
Ga0224549_10208041	3300022840	Soil	MRERFVYAALVLVVCGAIYLVTQGMNLINQPSDLKVAGGIGLIILVIVLFPAALRWIWHHKTTPHGQPNR
Ga0224550_10032803	3300022873	Soil	MRERFVYAALVLVICGAIYLITQGMNLINQPSNLKVAGGIGLIVAVFVLFPAAMRWIWHHKTTPHNQLNQ
Ga0224544_10440731	3300023250	Soil	AALVLVVCGAIYLVTQGMNLINQPSDLKVAGGIGLIILVIVLFPAALRWIWHHKTTPHGQPNR
Ga0209421_10072332	3300027432	Forest Soil	MAMRESFVYAALVLVVCGGIYLVTQGMNLLNQPSDMKVAGGVALIVLVFVLFPTAMRWIWHHKTTPHNQLRG
Ga0209008_10002877	3300027545	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDWKVAGGVALIVAVVVLFPTAMKWIWHHKTTPHDPPSR
Ga0209420_10455922	3300027648	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVFVLFPTAMRWIWHHKTTPHDPPNR
Ga0209420_10713922	3300027648	Forest Soil	MRERFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGIGLIVAVIVLFPAAIRWIWHHKTTPHSQLHSMGEKR
Ga0209420_11588671	3300027648	Forest Soil	MRERFVYAALVLVICGAIYLITEGMNLINQPSNLKVAGGIGLIIAVFVLFPAAMRWIWHHKTTPHNQVNQSER
Ga0209447_100783642	3300027701	Bog Forest Soil	MREGFVYAAVVLVICGAIYLITQGFNLINQPSDWKVAEGIGLVVAVIFLFPAAMRWIWHHKTTPHGGPLVR
Ga0209447_101216672	3300027701	Bog Forest Soil	MAMRESFVYAALVLVVCGGIYLITQGMNLLNQPSDFKVAAGVGLILVVFVLFPAAMRWIWHHKTTPHN
Ga0209248_100432611	3300027729	Bog Forest Soil	MREKFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVIVLFPAALKWIWHHKTTPHDPPNR
Ga0209248_102228782	3300027729	Bog Forest Soil	MRERFVYAALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLIVAVIVLFPAAMKWIWHHKTTPHGQQNR
Ga0209038_100238731	3300027737	Bog Forest Soil	MREKFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVGGGVALIVAVIVLFPAAMKWIWHHKTTPHDPPNR
Ga0209655_100278513	3300027767	Bog Forest Soil	MAMRERFVYAALVLVVCGAIYLITQGLNLINQPSDLKVAGGVALIIAVFVLFPAALRWIWHHKTTPHGQENRQEKE
Ga0209773_102083322	3300027829	Bog Forest Soil	MREGFVYAALFLVICGAVYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAAMKWIWHHKTTPHNQLNR
Ga0209274_100035907	3300027853	Soil	MREGFVYAALFLVICGAVYLVTQELNLLNQPSDLKVAGGVGLIVVVVVLFPAAMRWIWHHKTTPHNQLNR
Ga0209274_102258552	3300027853	Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVVVLFPTAMKWIWHHKTTPHDPPSR
Ga0209169_101163772	3300027879	Soil	MAMRESFVYAALVLVVCGGIYLITQGMNLLNQPSDFKVAAGVGLILVVFVLFPAAMRWIWHHKTTPHNPPNR
Ga0209624_1000007618	3300027895	Forest Soil	MRERFVYAALVLVIFGAIYLVTEGMNLINQPSNLKVAGGIGLIIAVFVMFPAAMRWIWHHKTTPHNQLNQSER
Ga0209624_109064651	3300027895	Forest Soil	RFAYAALVLVICGAIYLVTQGLNLLNQPSDLKVAGGVGLIVVVVVLFPAALKWIWHHKTTPHVPPNQ
Ga0209006_101579963	3300027908	Forest Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVIVLFLAAMKWIGHHKTTRHDPSNQ
Ga0265357_10064842	3300028023	Rhizosphere	MRESFVYAALFLVICGGIYLVTQGLNLINQPSDLKVAGGVGLILMVIVLFPAAMKWIWHHKNTPHRDSNR
Ga0302227_103034871	3300028795	Palsa	VRTWFQLSIEAQKAMREKFVYAALALVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVILLFPAAMKWIWHHKTTPHNQLNQ
Ga0302222_100516322	3300028798	Palsa	MREKFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVILLFPAAMKWIWHHKTTPHN
Ga0265338_100361624	3300028800	Rhizosphere	MAMRENFVYAALVLVICGGIYLVTQGMNLLNQPSDLKVAGGVTLIILVFVLFPAAMRWIWHHKTTPHNPQN
Ga0265338_107415681	3300028800	Rhizosphere	MRERFVYAALVLVVLGAIYLVTQAMNLLNQPSDMKVAAGIGLFVVVIILFPAAMRWIWHHKTTPHGQPNR
Ga0308309_108190692	3300028906	Soil	MALVLVICGAIYLVTQGLNLINQPSDLKVAGGVGLVVAVVVLFPAAMKWIWHHKTTPHGQQNR
Ga0308309_110423982	3300028906	Soil	MRGEFQNRTEVENVMRDSFVYAALILVICGAVYLGTQALNLLNQPSDLKVAAGVGLIVVVIVLFPAALRWIWHHKTTPHRLLNR
Ga0311338_118137301	3300030007	Palsa	MRDSFVYMALVLVVCGAVYLATQAMNLLNQPSDLKVAGGLALIVVVIVLFPAAIRWIWHHKTTPHNQLHR
Ga0302309_105490651	3300030687	Palsa	MREKFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVILLFPAAMKWIWHHKTTPHNQLNQ
Ga0302313_104684822	3300030693	Palsa	MRERFVYAALVLVVCGAIYLVTQGMNLINQPSDLKVAGGIGLIILVIVLFPAALRWIWHHKT
Ga0302314_111068991	3300030906	Palsa	MRERFVYAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVGLIVLVFVLFPAALKWIWHHKTT
Ga0302308_103755441	3300031027	Palsa	YAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVGLIVLVFVLFPAALKWIWHHKTTPHGQQNL
Ga0265760_100142323	3300031090	Soil	MREKFVYAALVLVVCGAIYLVTLGLDLLNQPSDTKVAGGVALIVAVVLLFPAAMKWIWHHKTTPHGLTNRQEK
Ga0302325_118086722	3300031234	Palsa	MRESFVYAALVLVVCGAIYLLTQALNLLNQPSDLKVAGGVGLIVVVLALFPAPMRWIWHHKTTPHAQQDR
Ga0310686_1029520012	3300031708	Soil	MMREGFVYAAVVLVICGAIYLITQGFNLINQPSDWKVAEGIGLVVAVIFLFPAAMRWIWHHKT
Ga0310686_1069575616	3300031708	Soil	MRERFVYAALVLVICGAIYLVTQGMNLLNQPSDLKVAGGVGLIVAVILLFPAAIRWIWHHKTTPHSQLHSIGEKR
Ga0310686_1105192242	3300031708	Soil	MRERFVYATLVLVICGAIYLVTQGMNLLNQPSDLKVAGGIGLIVAVIVLFPAAIRWIWHHKTTPHSQLHSMGEKR
Ga0310686_11083723211	3300031708	Soil	MREHFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVFVLFPTAMRWIWHHKTTPHDPPYR
Ga0310686_1109574672	3300031708	Soil	MRERFVYAALVLVVCGAIYLVTQGLNLINQPSDLKVAGGVALIVAVIVLFPAALKWIWHHKTTPHGQLNR
Ga0310686_1117558172	3300031708	Soil	MRERFVYAALVLVICGAIYFVTLGLNLLNQPSDLKVAGGVGLIVVVAVLFPAAMKWIWHHKTTPHIPPNR
Ga0310686_1117780772	3300031708	Soil	MREKFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVSVFVLFPAAMKWIWHHKTTPHNPPTR
Ga0310686_1118346272	3300031708	Soil	MVREGFVYAALVLVICGAIYLITQGLNLINQPSDLRVAEGIGLIVAVIFLFPAAMRWIWHHKTTPHGGPLARL
Ga0310686_1119519692	3300031708	Soil	MREKFVYAALVLVICGAIYLVTQGMNLMNQPSDLKVAGGVALIVAVFVLFPAAMKWIWHHKTTPHNPPNR
Ga0310686_11752775911	3300031708	Soil	MRDSFVYAALILVICGAVYLGTQALNLLNQPSDLKVAGGVGLIVVVIVLFPAALRWIWHHKTTPHRLLNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097729

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences