Metagenome / Metatranscriptome Family F097757

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097757
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	105 residues
Representative Sequence	KGHGNQILLVPLGGGPTRTITPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.808 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.31% Coil/Unstructured: 59.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
b.69.9.1: Tricorn protease domain 2	d1k32a3	1k32	0.76
b.69.2.2: YVTN repeat-like/Quinoprotein amine dehydrogenase	d1pbyb_	1pby	0.74
b.68.4.1: TolB, C-terminal domain	d2hqsa1	2hqs	0.74
b.68.7.1: Tricorn protease N-terminal domain	d1k32a2	1k32	0.73
b.69.7.1: Peptidase/esterase 'gauge' domain	d5n4fa2	5n4f	0.73

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11937	DUF3455	17.31
PF16640	Big_3_5	1.92
PF00486	Trans_reg_C	1.92
PF08281	Sigma70_r4_2	1.92
PF13505	OMP_b-brl	0.96
PF07690	MFS_1	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	93.27 %
Unclassified	root	N/A	2.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.88 %
Unclassified	root	N/A	2.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	2.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	2.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	2.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.92 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	2.88 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.92 %
Roseomonas cervicalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas cervicalis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002GJE85	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300000789\|JGI1027J11758_12545862	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300004092\|Ga0062389_101949281	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005332\|Ga0066388_102263959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	982	Open in IMG/M
3300005439\|Ga0070711_100422972	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005555\|Ga0066692_10069700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2012	Open in IMG/M
3300005559\|Ga0066700_10174243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1473	Open in IMG/M
3300005610\|Ga0070763_10786843	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300005764\|Ga0066903_102061174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1097	Open in IMG/M
3300005764\|Ga0066903_105089197	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300005764\|Ga0066903_107135839	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005764\|Ga0066903_108819833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	512	Open in IMG/M
3300006050\|Ga0075028_100114183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1393	Open in IMG/M
3300006175\|Ga0070712_101787892	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300006606\|Ga0074062_10996783	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300006804\|Ga0079221_10743131	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300006854\|Ga0075425_101612691	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300006903\|Ga0075426_11234406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas cervicalis	567	Open in IMG/M
3300006914\|Ga0075436_101098177	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300007076\|Ga0075435_101751282	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300007265\|Ga0099794_10116081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344	Open in IMG/M
3300010043\|Ga0126380_11548637	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300010048\|Ga0126373_12086210	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300010159\|Ga0099796_10233858	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300010358\|Ga0126370_11263283	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300010366\|Ga0126379_10348041	All Organisms → cellular organisms → Bacteria → Acidobacteria	1511	Open in IMG/M
3300010373\|Ga0134128_10657822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300010376\|Ga0126381_102487689	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300010376\|Ga0126381_102807320	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300012096\|Ga0137389_10367487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300012202\|Ga0137363_10334651	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300012203\|Ga0137399_10011968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5281	Open in IMG/M
3300012209\|Ga0137379_11189273	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300012211\|Ga0137377_10306649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300012351\|Ga0137386_10815221	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300012355\|Ga0137369_11139996	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300012361\|Ga0137360_10449517	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300012925\|Ga0137419_10708994	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300012929\|Ga0137404_10214417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1637	Open in IMG/M
3300012971\|Ga0126369_11147271	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300014968\|Ga0157379_12534623	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300015373\|Ga0132257_100229113	All Organisms → cellular organisms → Bacteria → Acidobacteria	2212	Open in IMG/M
3300016404\|Ga0182037_10308045	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300016422\|Ga0182039_11362866	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300020580\|Ga0210403_10011419	All Organisms → cellular organisms → Bacteria → Acidobacteria	7203	Open in IMG/M
3300020580\|Ga0210403_10037759	All Organisms → cellular organisms → Bacteria → Acidobacteria	3859	Open in IMG/M
3300020581\|Ga0210399_10366426	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300021170\|Ga0210400_11364337	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300021180\|Ga0210396_11176595	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300021405\|Ga0210387_11354776	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300021407\|Ga0210383_10261763	All Organisms → cellular organisms → Bacteria → Acidobacteria	1485	Open in IMG/M
3300021432\|Ga0210384_11021288	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300021474\|Ga0210390_10656700	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300021474\|Ga0210390_10822983	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300021478\|Ga0210402_10073542	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300021478\|Ga0210402_11749329	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300021560\|Ga0126371_10999410	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300021560\|Ga0126371_13782168	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300024222\|Ga0247691_1021897	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300024222\|Ga0247691_1065680	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300024287\|Ga0247690_1025467	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300024290\|Ga0247667_1055230	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300025922\|Ga0207646_11114856	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300026532\|Ga0209160_1109584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300026557\|Ga0179587_10259908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300027874\|Ga0209465_10074731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1645	Open in IMG/M
3300027908\|Ga0209006_11480286	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300031057\|Ga0170834_111109591	All Organisms → cellular organisms → Bacteria → Acidobacteria	1949	Open in IMG/M
3300031128\|Ga0170823_14495161	All Organisms → cellular organisms → Bacteria → Acidobacteria	2050	Open in IMG/M
3300031231\|Ga0170824_101999257	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300031231\|Ga0170824_103420327	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300031231\|Ga0170824_119511879	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300031474\|Ga0170818_105327079	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300031474\|Ga0170818_110206629	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300031546\|Ga0318538_10576939	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300031561\|Ga0318528_10641777	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300031679\|Ga0318561_10169138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300031718\|Ga0307474_10570474	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300031719\|Ga0306917_10645281	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300031719\|Ga0306917_11203349	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300031720\|Ga0307469_11184181	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300031770\|Ga0318521_10944764	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300031781\|Ga0318547_10943640	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300031821\|Ga0318567_10453865	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300031821\|Ga0318567_10776851	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300031910\|Ga0306923_10781074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300031941\|Ga0310912_11334092	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300031942\|Ga0310916_11068792	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300031945\|Ga0310913_10394208	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300031947\|Ga0310909_10601927	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300032001\|Ga0306922_10031986	All Organisms → cellular organisms → Bacteria	5360	Open in IMG/M
3300032001\|Ga0306922_11962017	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300032035\|Ga0310911_10166042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300032039\|Ga0318559_10493983	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300032076\|Ga0306924_10899850	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300032076\|Ga0306924_11065637	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300032174\|Ga0307470_10249446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300032180\|Ga0307471_100000988	All Organisms → cellular organisms → Bacteria → Acidobacteria	15184	Open in IMG/M
3300032180\|Ga0307471_102080363	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300033158\|Ga0335077_10572205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300033290\|Ga0318519_10523405	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.35%
Plants	Host-Associated → Plants	6.73%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_08722020	2170459003	Grass Soil	VKGHGNQILLVPLGGGPTRTMTLKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGAIQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF
JGI1027J11758_125458622	3300000789	Soil	PDGSRIGIGKRHSDRIWLLPLDGSQKRLITMKGYSDLEDLSWAIDSQSMFVSVRSPGGATLLHVDLKGNAIPLWQQPQTSWTWAFPSPDGHHLAMLGESSEANVWLIDSF*
Ga0062389_1019492811	3300004092	Bog Forest Soil	QTRTISIKGFSDLEDLNWAIDSQSMFVSTREPGGATVLHVDLGGNAQPVWQQSQTAFTWGLPSPDGRHLAILGSNSEANVWMIDNF*
Ga0066388_1022639592	3300005332	Tropical Forest Soil	IKGYSDFLELFWAMDSQSMFVSTQAPGGAILWRVSLRGEAQPIWHTKSPHTWGFPSPDGRHLAILDSNRESNVWLINNF*
Ga0070711_1004229722	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DGSRIAILKRHGNQIRLMPLAGGRTKTITVKNHPDLVDLNWATDSRSMFVSTLEPGGAALLHVELNGEAQPVWQQSQAFSTWGFPSPDGRHLAILASNAESNAWLIDNF*
Ga0066692_100697001	3300005555	Soil	KRHGHEIRLVPLSGGQTRTITTKGYSDLLNLNWAIDSQSMFVSTLQPGGATLLHVALNGDAQPVWQQPQSTFIWGFPSPDGRHVAILGASSEANVWMIGNF*
Ga0066700_101742433	3300005559	Soil	KGHGNQILLVPLGGGPTRTITPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF*
Ga0070763_107868431	3300005610	Soil	TTKGYSDLMEFYWAIDSQSMFVSTVAPGGVGLLHVSLGGEAQPIWHRPQSTHTWGFPSPDGRHLAIMDANSESNVWMISNFGAVNGPKPE*
Ga0066903_1020611741	3300005764	Tropical Forest Soil	WELSPDGSRIAIVKLHSHEIRVVPLRGGQTRTITVKGFPNLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPQSKTTWGFPSPNGRHLAIMGSNSESNVWIINNF*
Ga0066903_1050891971	3300005764	Tropical Forest Soil	NADIGFDYWWQLSPDGSQIGIVKKHGNQIRLVPLSGGPTRTITLNGYSDLMELFWAIDSQSMFVSTLAPGGSILLHVSLSGDAQPIWHRPQSSHTWGFPSPDGHHLAIMDSNSESNAWIINNF*
Ga0066903_1071358392	3300005764	Tropical Forest Soil	QIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLDGDVQTLWHQPQSILTWGLPSPDRRHLAILGASSEANVWVISNF*
Ga0066903_1088198331	3300005764	Tropical Forest Soil	TINGYSDLLEFYWAIDSQSMFVSTLAPGGAILLHVSLCGDAQPIWHRTQSTHTWGFPSPDGRHLAILNSNSESNVWMINNF*
Ga0075028_1001141832	3300006050	Watersheds	SADIGFDYSWQLSPDGSQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLESGGANLLHVGLNGDTQLVWHQSQATDTWGFPSPDGRHLALTGASSESNVWLIGNF*
Ga0070712_1017878921	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DIGFDYWWQLSPDGSTIGIVKKHGNQIRLVPLSGGPTRTITINGYPDLEEFFWATDSQSMFVSTIETGGAILVRVSLSGNAQPIWHRPQSTHAWGFPSPDGSHLAIMDSNTESNVWMINNF*
Ga0074062_109967832	3300006606	Soil	GIVKGHGNQILLVPLGGGPTRTVTPKGHSDLIDLSWANDSQSLFVSTLEPGGANLLHVEFNGNTHVVWRQSQATDTWGSPSPDGRHLAILGTSSEANVWLINNF*
Ga0079221_107431311	3300006804	Agricultural Soil	GGPGRELARIPLDAGSSADIGFDYSWQLSPDGSQIGIVKGHGNQILLVPLGGGPTRTVTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGNTQPVWHQSQATDTWGFPSPDGRHLALTGASSESNVWLIGNF*
Ga0075425_1016126911	3300006854	Populus Rhizosphere	ADIGFDYSWQLSPDGSRIGIVKRHGHEIRLVPLGGGQTTTIQPKGYSDLGDLNWAIDSQSLFVSTLEPGGATLLHVALSGNAQPVWQQSQSTYSWGFPSPDGRHLAIVGASSDANVWIIDNF*
Ga0075426_112344061	3300006903	Populus Rhizosphere	IGIVKMHGNQIRLVPLSGGPTRTITINGYSDLMEFFWATDSQSMFVSTLAPGGAILLHVSLNGEAQPIWHRPESTHTWGFPSPDGSHLAILNSNSESNVWMIGNF*
Ga0075436_1010981771	3300006914	Populus Rhizosphere	ELLRIPLENGSSADIGFDYWWQLSPDGSTIGIVKKHGSQIRLVPLSGGPTRTITINGYPDLEEFFWATDSQSMFVSTIETGGAILVRVSLSGNAQPIWHRPQSTHAWGFPSPDGSHLAIMDSNTESNVWMINNF*
Ga0075435_1017512822	3300007076	Populus Rhizosphere	QLSPDGSRIGIVKRHGHEIRLVPLGGGQTTTIQPKGYSDLGDLNWAIDSQSLFVSTLEPGGATLLHVALSGNAQPVWQQSQSTYSWGFPSPDGRHLAIVGASSDANVWIIDNF*
Ga0099794_101160813	3300007265	Vadose Zone Soil	LSGGPTRTITINGYSDLMDLYWAIDSKSLYVSTQEPSGATLLHVSLSGEAQPIWHRPQSTHTWGFPSPDGSHLAILNSNSESNVWMINNF*
Ga0126380_115486371	3300010043	Tropical Forest Soil	PTRTITIKGYSDLMELFWAMDSQSIFISTQAPGGAILLRVSLTGEAQSIWHRAQSTHTWGFPSPDGRHLAIMDANTESNVWMINNF*
Ga0126373_120862101	3300010048	Tropical Forest Soil	GFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLDGDVQTLWHQPQSILTWGLPSPDRRHLAILGASSEANVWVISNF*
Ga0099796_102338581	3300010159	Vadose Zone Soil	GIVKGHGNQILLVPLGGGPTRTMTPNGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGNTQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIGNF*
Ga0126370_112632831	3300010358	Tropical Forest Soil	LKKHGNQIRLVPLPGGPTKTITINGYSDLMEFFWAIDSQSMFVSTLAPGGAILLHVLINGEAQPIWHRPESSHTWGFPSPDGSHLAILSSNSESNVWMINNF*
Ga0126379_103480413	3300010366	Tropical Forest Soil	LMELFWATDSQSIFISALAPGGSILLHVSLSGEAQPIWHRLQSSHTWGFPSPDGHHLAIMDSNSESNAWIINNF*
Ga0134128_106578221	3300010373	Terrestrial Soil	GATRTITVNGYSDLLEFFWANDSQSMFFSTFAPDGGSLLHVSLTGQAHPIWHRPQSTHAWGFPSPDGRHLAIMDSHSESYVWMISNF*
Ga0126381_1024876891	3300010376	Tropical Forest Soil	RIPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSVLTWGLPSPDRRHLAILGASSEANVWVISNF*
Ga0126381_1028073201	3300010376	Tropical Forest Soil	RIPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTMTPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGLPSPDRRHLAILGASSEANVWVISNF*
Ga0137389_103674871	3300012096	Vadose Zone Soil	IGIVKRHGNQIRLVPLGGGQTRTITVKGNSELMELNWAIDSQSMFVSAVEPGAATLLHVDVNGNAQPVWQQPQPKLTWGFPSPDGCHLAILGTSSEANVWVIGNF*
Ga0137363_103346512	3300012202	Vadose Zone Soil	RIPVEAGSSADIGFDYSWQLSPDGSQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLESGGANLLHVDLNGDTQLVWHQSQATDTWGFPSPDGRHLALTGASSESNVWLIGNF*
Ga0137399_100119687	3300012203	Vadose Zone Soil	HGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLESGGANLLHVDLNGDTQLVWHQSQATDTWGFPSPDGRHLALTGASSESNVWLIGNF*
Ga0137379_111892732	3300012209	Vadose Zone Soil	GGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF*
Ga0137377_103066491	3300012211	Vadose Zone Soil	QILLVPLGGGPTRTITPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF*
Ga0137386_108152211	3300012351	Vadose Zone Soil	GGQTRTITTKGYSDLLDLNWAMDSQSMFVSTLEPSGATVLHVGLNGDAQPVWHQPQSVFTWGLPSPDGRHLAILGSNSEANVWMIGNF*
Ga0137369_111399961	3300012355	Vadose Zone Soil	GSQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF*
Ga0137360_104495172	3300012361	Vadose Zone Soil	IPVEAGSSADIGFDYSWQLSPDGSQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLESGGANLLHVDLNGDTQLVWHQSQATDTWGFPSPDGRHLALTGASSESNVWLIGNF*
Ga0137419_107089941	3300012925	Vadose Zone Soil	HGHEIRLVPLSGGQTRTITTKGYSDLLNLNWAIDSQSMFVSTLQPGGATLLHVALNGDAQPVWQQPQSTFIWGFPSPDGRHVAILGASSEANVWMIGNF*
Ga0137404_102144171	3300012929	Vadose Zone Soil	GYSDLMDLYWAIDSKSLYVSTQEPSGATLLHVSLSGEAQPIWHRPQSTHTWGFPSPDGSHLAILNSNSESNVWMINNF*
Ga0126369_111472711	3300012971	Tropical Forest Soil	RIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQGMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSVVTWGLPSPDRRHLAILGASSEANVWVISNF*
Ga0157379_125346231	3300014968	Switchgrass Rhizosphere	IVKKHGNQIRLVPLSGGPTRTVTINGYSDLMEFFWAIDSQSIFVSTLAPGGAILLHVSLNGEAQPIWHRPESTHTWGFPSPDGRHLAILNSNSESNVWMIGNF*
Ga0132257_1002291131	3300015373	Arabidopsis Rhizosphere	HGNQIRLVPLSGGPTRTITINGYSDLMEFFWAIDSHSMFVSTLAPGGAILLHVSLNGEAQPIWHRPESTHTWGFPSPDGSHLAILNSNSESNVWMIGNF*
Ga0132255_1012591941	3300015374	Arabidopsis Rhizosphere	PTSDSKGYSDLLDLNWATDSQSMFVSTLQPGGATLLHIGLNGDARPIGQQPRSPYAGGIPSPDGRHLALAGTSSESNVWMMGNF*
Ga0182037_103080451	3300016404	Soil	QIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0182039_113628661	3300016422	Soil	KIGIVKRHGNQIRLVPLSGGPTRTITIDGYSDFLELFWAMDSQTMFVSTQAPGGAILLRVSLGGEAQPIWHTKSPHTWGFPSPDGRHLAILDSNRESNVWLINNF
Ga0210403_100114191	3300020580	Soil	GNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDAQPVWQQSQATDAWGFPSPDGRHLALTGASSESNVWLIGNF
Ga0210403_100377594	3300020580	Soil	IGFDYWWQLSPDGSRIGIVKKHGNQIRLVPLSGGPTRTITITGYSDILEFYWAIDSESMFVSTLAPGGAILLHVSLSGEAQPIWHRPQSSHTWGFPSPDGRHLAILNSNSESNVWMINNF
Ga0210399_103664261	3300020581	Soil	GSWIGIMKRHGHQIRLVPLGGGPMRTIIVKGHSDFQEVNWAADSQSMFVSSVELGAATLLHVGLNGDAQPVWQQPQPKLIWGFPSPDGRHLAILSASSDANAWLISNF
Ga0210400_113643372	3300021170	Soil	LMELYWAIDSQSMFVSTLAPGGAILLHVSLGGEAQPIWHLPQSTHTWGFPSPDGRHLAILNSNTESNVWLINNF
Ga0210396_111765952	3300021180	Soil	DGSQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDAQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIDNF
Ga0210387_113547761	3300021405	Soil	GNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIDNF
Ga0210383_102617632	3300021407	Soil	SSADLGFDYWWQLSPDGSQIGIVKWHSHEIRLVPLRGGLTRTITVKSFADLLHLEWANDSQSMFVSTFEPDGSTLLRVALNGDALPIWHQPQSKTTWGFPSPDGRHLAIMGSNSESNAWIIGNF
Ga0210384_110212881	3300021432	Soil	TRTITINGYPDLMDLYWAIDSKSLYVSTQEPSGATLLHVSLSGEAQPIWHRPQSSHTWGFPSPDGSHLAILNSNSESNVWMINNF
Ga0210390_106567002	3300021474	Soil	SQIGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTSEPGGANLLHVDLNGNTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF
Ga0210390_108229831	3300021474	Soil	GHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDAQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIDNF
Ga0210402_100735421	3300021478	Soil	IGFDYWWQLSPDGSRIGIVKKHGNQIRLVPLSGGPTRTITINGYSDILEFYWAIDSESMFVSTLAPGGAILLHVSLSGEAQPIWHRPQSSHTWGFPSPDGRHLAILNSNSESNVWMINNF
Ga0210402_117493291	3300021478	Soil	VPLSGGPTRTITINGYSDLLEFYWAIDSQSMFASTLAPGGAILLHVSLSGEAQPIWHRPQSTHTWGFPSPDGHHLAIVNSHSESNVWMINNF
Ga0210410_101022801	3300021479	Soil	TMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWAIDNF
Ga0126371_109994102	3300021560	Tropical Forest Soil	GPGKELVRIPLEAGSSADLGFDYWWQLSPDGSRIAIVKLHSHEIRVVPLRGGQTRTIAVKGFPDLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPQSKTTWGFPSPNGRHLAIMGSNSESNVWIINNF
Ga0126371_137821681	3300021560	Tropical Forest Soil	IPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDLLELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSVVTWGLPSPDRRHLAILGASSEANVWVISNF
Ga0247691_10218971	3300024222	Soil	SGGPTRTITINGYSDLMEFFWAIDSHSMFVSTLAPGGAILLHVSLNGEAQPIWHRPESTHTWGFPSPDGSHLAILNSNSESNVWMIGNF
Ga0247691_10656801	3300024222	Soil	RTITTNGYSDLLELFWAIDSQSMFVSTVAPGGASLLHVSLSGEAQPVWHRPESTHAWGFPSPDGRHLAIMNSSSESNVWIINNF
Ga0247690_10254672	3300024287	Soil	DGSKIGIVKKHGNQFRLVPLSGGATRTITVNGYSDLLEFFWANDSQSMFFSTFAPDGGSLLHVSLTGQAHPIWHRPQSTHAWGFPSPDGRHLAIMDSHSESYVWMISNF
Ga0247667_10552301	3300024290	Soil	EFFWANDSQSMFFSTFAPDGGSLLHVSLTGQAHPIWHRPQSTHAWGFPSPDGRHLAIMDSHSESYVWMISNF
Ga0207646_111148561	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QIGIVKGHGNQILLVPLAGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGNTQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIDNF
Ga0209160_11095842	3300026532	Soil	LLVPLGGGPTRTITPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF
Ga0179587_102599082	3300026557	Vadose Zone Soil	RLVPMAGGQTRTITTKGHSDLIELNRAIDSQSMFVSTLEPGGASLLHVDLNGNIQPVWQQSQATDTLGFPSPDGRHLAILGSNTESNVWLINNF
Ga0209465_100747312	3300027874	Tropical Forest Soil	IRLVPLGGGQTRTITPKGHSDLLELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSVVTWGLPSPDRRHLAILGASSEANVWVISNF
Ga0209006_114802861	3300027908	Forest Soil	QLAPDGSSIAILKRNGHQVDLVSLQNGPTRTIVVRGHPDLQDLNWAADSQSFFVSSAESEGAALLRVSLNGDAEPVWQQSQPKLIWGFPSPDGHHLAFLGASSDANVWLISNF
Ga0170834_1111095913	3300031057	Forest Soil	ATDSQSMFVSTLAPSGAILLHASPSGETQPIWQRPQSTYTWGFPSPDGRHLAIFDANSESNVWMINNF
Ga0170823_144951614	3300031128	Forest Soil	PLRGGQTRTITVKGFPDLLHLEWANDSQSMFVSTFEPSGATLLRVALNGDASPVWHQPQSKTTWGFPSPDGRHLAIMGSNSESNAWIISNF
Ga0170824_1019992571	3300031231	Forest Soil	KHGNQIRLVPLSGGPTRTITITGYSDILEFYWAIDSQSMFVSSLAPGGAILLHVSLSGEAQAIWHRPQSSHTWGFPSPDGRHLAILDSNSESNVWMINNF
Ga0170824_1034203271	3300031231	Forest Soil	IVKKHGNQIRLVPLSGGPTRTITIIGYSDILEFYWAIDSESMFVSALAPGGAILLHVSLSGEAQPIWHRPQSSHTWGFPSPDGRHLAILNSNSESNVWIINNF
Ga0170824_1195118791	3300031231	Forest Soil	GILKRHGNQIQLVPLRGGPIRTITVTGHPDLQELNWATDSQSMFVSSVEPGTAALLHVGLNGDTEPVWQQSNLIWGFPSPDGRHLAILGASSDANVWLISNF
Ga0170818_1053270791	3300031474	Forest Soil	ADIGFDYWWQLSPDGSRIGIVKKHGNQIRLVPLSGGPTSTITINGYSDILEFYWAIDSESMFVSALAPGGAILLHVSLSGEAQPIWHRPQSSHTWGFPSPDGRHLAILNSNSESNVWIINNF
Ga0170818_1102066292	3300031474	Forest Soil	VPLRGGQTRTITVKGFPDLLHLEWANDSQSMFVSTFEPSGATLLRVALNGDALPVWRQPQSKTTWGFPSPDGRHLAIMGSNSESNAWIISNF
Ga0318538_105769391	3300031546	Soil	KELVRIPLEAGSSADLGFDYWWQLSPDGSRIAIVKLHSHEIRVVPLRGGQTRTITVKGFPNLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPQSKTTWGFPSPNGRHLAIMGSNSESNVWIINNF
Ga0318528_106417772	3300031561	Soil	ELARIPLEVGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPDGATVLHVDLNGDVQTLWHQPQSVFTWGLPSPDRRHLAILGASSEANVWVISNF
Ga0318561_101691382	3300031679	Soil	IPLEVGSSADIGLDYSWQLSPDGSWIGIVKRHGHQIRLVPLGGGPMRTIIVKGHADLLEVNWATDSQSMFVSSAEPGAANLLHVGLNGDAQPVLQQPQPKLMWGFPSPDGHHLAILAASSDANVWLIGNF
Ga0307474_105704741	3300031718	Hardwood Forest Soil	IGIVKGHGNQILLVPLGGGPTRTMTPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGDTQPVWQQSQATDTWGSPSPDGRHLAILGTSSEANVWTIDNF
Ga0306917_106452812	3300031719	Soil	LEVGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0306917_112033491	3300031719	Soil	PDGSKIGIVKRHGNQIRLVPLSGGPTRTITIDGYSDFLELFWAMDSQTMFVSTQAPGGAILLRVSLGGEAQPIWHLPQSTDTWGFPSPDGRHLAILGSNRESNVWLINNF
Ga0307469_111841812	3300031720	Hardwood Forest Soil	GQTRTIAVKGFPDLLHLEWANDSQSMFVSTFEPSGATLLRVALNGNASPVWHQPQSKTTWGFPSPDGRHLAIMGSNSESNAWIISNF
Ga0318521_109447641	3300031770	Soil	IRLVPLGGGQTRTITPKGHSDLLELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSVFTWGLPSPDRRHLAILGASSEANVWVISNF
Ga0318547_109436401	3300031781	Soil	GGQTRTITPKGHSDLLELNWAMDSQSMFVSTLEPDGARVLHVDLNGDVQTLWHQPQSVFTWGLPSPDGRHLAILGASSEANVWVISNF
Ga0318567_104538652	3300031821	Soil	SPDGSRIAIVKLHSHEIRVVPLRGGQTRTITVKGFPDLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPQSKTTWGFPSPNGRHLAIMGSNSESNVWIINNF
Ga0318567_107768511	3300031821	Soil	EVGSSADIGLDYSWQLSPDGSWIGIVKRHGHQIRLVPLGGGPMRTIIVKGHADLLEVNWATDSQSMFVSSAEPGAANLLHVGLNGDAQPVLQQPQPKLMWGFPSPDGHHLAILAASSDANVWLIGNF
Ga0306919_104182391	3300031879	Soil	ITPKGHSDLLELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0306923_107810741	3300031910	Soil	HGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0310912_113340922	3300031941	Soil	GAGKELARIPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0310916_110687921	3300031942	Soil	TITINGYSDLLELYWAIDSQSMFVSTLAPGGAILLHVSLSGEAQPIWHRPQSTNTWGFPSPDGHHLAILDSHSESNVWMIKNF
Ga0310913_103942081	3300031945	Soil	VPLGGGQTRTITPKGHSDLLELNWAMDSQSMFVSTLEPGGARVLHVDLNGDVQTLWHQPQSVFTWGLPSPDGRHLAILGASSEANVWVISNF
Ga0310909_106019271	3300031947	Soil	HGNQIRLVPLCGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0306922_100319861	3300032001	Soil	GGQTRTITVKGFPNLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPQSKTTWGFPSPNGRHLAIMGSNSESNVWIINNF
Ga0306922_119620172	3300032001	Soil	RIPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0310911_101660421	3300032035	Soil	VKLHSHEIRVVPLRGGQTRTITVKGFPDLLHLEWANDSQSMFVSTFEPGGASLLRLALNGDALPIWHQPLSRTTWGFPSPNGRHLAIMGSNSESNVWIINNF
Ga0318559_104939831	3300032039	Soil	SADIGLDYSWQLSPDGSWIGIVKRHGHQIRLVPLGGGPMRTIIVKGHADLLEVNWATDSQSMFVSSAEPGAANLLHVGLNGDAQPVLQQPQPKLMWGFPSPDGHHLAILAASSDANVWLIGNF
Ga0306924_108998502	3300032076	Soil	KHGNQIRLVPLSGGPTTTITINGYSDLLELYWAIDSQSMFVSTLAPGGAILLHVSLSGEAQPIWHRPQSTNTWGFPSPDGHHLAILDSHSESNVWMIKNF
Ga0306924_110656372	3300032076	Soil	AFDPLGGAGKELARIPLEAGTSADIGFDYSWQLSPDGSRIGIVKRHGNQIRLVPLGGGQTRTITPKGHSDFQELNWAMDSQSMFVSTLEPGGATVLHVDLNGDVQTLWHQPQSALTWGIPSPDRRHLAILGASSEANVWVISNF
Ga0307470_102494461	3300032174	Hardwood Forest Soil	SQIGIVKGHGNQILLVPLGGDPTRTITPKGHSDLIDLSWANDSQSMFVSTLEPGGANLLHVDLNGNTQPVWRQSQATDTWGFPSPDGRHLAILGTSSEANVWTIDNF
Ga0307471_10000098816	3300032180	Hardwood Forest Soil	GHQIRLVPLSGGQTRTITTKGYSDLLDLNWAIDSQSMFVSTLEPGGATVLHVDLNGNAQPVWQQPQADFTWGFPSPDGRHLAILGSNSEANVWMIGNF
Ga0307471_1020803632	3300032180	Hardwood Forest Soil	IGIVKRHSNQIRLVPLRGGQTRTITVKGFPDLLDLNWAIDSQSMFVSTIEPGGSTLLGVALNGDAQPIWRQHQSKLTWGFPSPDGRHLAIMGASSEANVWMISNF
Ga0335077_105722053	3300033158	Soil	LHSHEIRLVPVRGGQTRTIAVKGFSDLVHLEWANDSQSMFVSAIEPGGSSVLRVMLNGDAWPVWHQPQAKMTWGFPSPDGHHLAIMGGYSESNAWIISNF
Ga0318519_105234051	3300033290	Soil	QGKELVRIPLEVGSSADIGLDYSWQLSPDGSWIGIVKRHGHQIRLVPLGGGPMRTIIVKGHADLLEVNWATDSQSMFVSSAEPGAANLLHVGLNGDAQPVLQQPQPKLMWGFPSPDGHHLAILAASSDANVWLIGNF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097757

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences