Metagenome Family F097850

Basic Information
Family ID	F097850
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	VRELTTETNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLGGVTYLYRVAAVS
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.96 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (99.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.423 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.62% β-sheet: 25.96% Coil/Unstructured: 64.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07805	Obsolete Pfam Family	0.96
PF01343	Peptidase_S49	0.96
PF00486	Trans_reg_C	0.96
PF00512	HisKA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
All Organisms	root	All Organisms	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
cellular organisms	root	All Organisms → cellular organisms	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Scaffold	Taxonomy	Length	IMG/M Link
3300033402\|Ga0326728_10004738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	39659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.54%
Aquatic	Environmental → Aquatic	37.50%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.35%
Freshwater	Environmental → Aquatic → Freshwater	26.92%
Peat	Environmental → Terrestrial → Peat	20.19%
Sediment	Environmental → Aquatic → Sediment	10.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.58%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	9.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.88%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102940061	3300001356	Peatlands Soil	QAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFAVERLGGVTYLYRVAAVA*
Ga0062385_100897431	3300004080	Bog Forest Soil	VAGLGLVDPGVEQALIAPVVVRELTTETNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERVGGVTYLYRVAAVS*
Ga0062387_1010072032	3300004091	Bog Forest Soil	VRELTTETNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLGGVTYLYRVAAVS*
Ga0062389_1012659361	3300004092	Bog Forest Soil	SGPRRRIELLAGQGALAEQVSQRNVASADVLFETALGLLYCGEMFHIEGFVVERIGGVTYLYRVAAVS*
Ga0070713_1018179921	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS*
Ga0070706_1000956081	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ASIAPVIVREFTTESNGPRRRIELLAGCSAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLGGVVYLYRVSAVS*
Ga0070761_110965772	3300005591	Soil	VVELTTENNGPRRRIELLAGQEAMEEQVSQRNVASADVLFETALGLLYCGEMFHIQGFVVERIGGVAYLYRVAAVS*
Ga0075029_1000353571	3300006052	Watersheds	AALAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLAGVTYLYRVAAVA*
Ga0075017_1004092561	3300006059	Watersheds	AVAELGLIDPGVEQASICPVIVRELTTEKNGPRRRIEMLAGRTALAEQVSQRNVASADVLFATALGIVYQGEMFHIEGFVVERFEGVAYLYRVLAVA*
Ga0075019_106599942	3300006086	Watersheds	IDPGVEQAAISPVVVRELMTENNGPRRRIEMLAGRSAMAQLVSQRNVASADVLFETALGIVYQGEMFHIEGFLVERFEGVAYLYRVLAVA*
Ga0075015_1001746873	3300006102	Watersheds	AGLPADRVAELGLVDPGVEQAVIAPVLVRELATENSGPRRRIELVAGRSAMAEQVSQRNVASAEVLFDTALGVVYEGEMFHIEGFVVERFAGVAYLYRVAAVA*
Ga0075015_1006730902	3300006102	Watersheds	LGLVDPGVEQASISPVIVREVTTENNGPRRRIELLVGQAAMAEQVSQRNAASADVLLETALGLVYCGEVFHIEGFVVERLAGVAYLYRVAAVA*
Ga0075015_1009854651	3300006102	Watersheds	VREATTESNGPRRRIEVLAGSSALAEQVSQRNVASAEVLLENALGLVYGGEVFHIQGFVVERLAGVAYLYRLVAMA*
Ga0075014_1003574961	3300006174	Watersheds	AELGLVDPGVEQAAIAPVLVRELTTENSGPRRRIELVAGRSAMAEQVSQRNVASADVLFDTALGVVYQGEMFHIEGFVVERFAGVAYLYRVVAVA*
Ga0075014_1005462802	3300006174	Watersheds	LGLVDPGVEQASISPVIVREVTTENNGPRRRSELLVGQAAIAEQVSQRNAASADVLLETALGLVYCGEVFHIEGFVVERLAGVAYLYRVAAVA*
Ga0070765_1003141601	3300006176	Soil	QALIAPVVVREISTENSGPRRHIELLAGQAALAQQVSQRNVASADVLFETALGLVYCGEVFHIQGFMVERLGGVTYLYRVSAVS*
Ga0116218_14072141	3300009522	Peatlands Soil	ALIAPVIVRELTTENNGPRRRIELLAGYSAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLGGVAYLYRVAAMA*
Ga0116118_11223981	3300009637	Peatland	PVVVRELTTENNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYRGEVFHIQGFIVERVGGVAYLYRVAAVA*
Ga0116101_11269712	3300009759	Peatland	TETNGPRRRIEMLAGHAAMAEQVSQRNVASAEVLFETALGLVYGGEMFHIQGFIVERLGGVAYLYRVAAMA*
Ga0126380_120280061	3300010043	Tropical Forest Soil	ELTTENSGPRRRIEILAGRSALAEHVSQRNAASAEVLIETALGVAFQGEMFHIEGFVVERFEGVPYLYRVMGVA*
Ga0074045_1000142716	3300010341	Bog Forest Soil	VDPGVEQALIAPVVVVELTTENNGPRRRIEMLAGQAALAEQVSQRNVASAEVLFATALALVYCGEVFHIEGFVVERLGGVTYLYRVAAVA*
Ga0136449_1006630573	3300010379	Peatlands Soil	VDPGVEQALIAPVVVRELTSETNGPRRRIEMLAGQAAMAEQVSQRNVASAEVLFETALGLVYRGEVFHIQGFVVERVGGVAYLYRVAAVS*
Ga0136449_1033852911	3300010379	Peatlands Soil	GQAAMAEQVSQRNVASAEVLFETALGLVYRGEVFHIEGFVVERVGGVAYLYRVAAVS*
Ga0137363_112708892	3300012202	Vadose Zone Soil	DPGVEQALIAPVIVRELTAENNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS*
Ga0137359_101764201	3300012923	Vadose Zone Soil	RRRIELLAGQAAMAEQVSQRNAASAEVLFETALGLVYRGEVFHIQGFVVERLAGVAYLYRVSAVS*
Ga0137419_114427641	3300012925	Vadose Zone Soil	IVREMTTENTGPRRRIELLAGRSTMAEQVSQRNVSSADVLFETALGVVYQGEMFHIGGFVVERFAGVAYLYRVSAVS*
Ga0137419_116011942	3300012925	Vadose Zone Soil	AAISPVIVREMTTENSGPRRRIELLAGRSTMAEQVSQRNVSCADVLFETALGVVYQGEMFHIEGFVVERFAGVAYLYRVSAVA*
Ga0181524_104366852	3300014155	Bog	RELTSETNGPRRRIELLAGQTAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLGGMPYLYRVAAVS*
Ga0181529_106119512	3300014161	Bog	IELLAGRSAMAAQVSQRNVASADVLFDTALGIVYDGEMFHIEGFVVERFAGVAYLYRVLAVA*
Ga0181532_105162191	3300014164	Bog	TENNGPRRRIELLVGRSAMVQQVSQRNVASADVLFETALGVVYRGEMFHIEGFIAERFDGVAYLYRVLAVA*
Ga0182017_109496681	3300014494	Fen	MLAGQAAMAEQVSQRNVASAEVLFETALGLVYGGEMFHIQGFIVERVGGAAYLYRVAAVS
Ga0182019_110386221	3300014498	Fen	RRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYAGEMFHIQGFVVERLGGVPYLYRVAAMS*
Ga0182019_114425192	3300014498	Fen	PRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEMFHIQGFVVERLGGVAYLYRVAAMS*
Ga0181536_101325371	3300014638	Bog	RRRIEILAGQAATAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLGGMPYLYRVAAVS*
Ga0182030_102633313	3300014838	Bog	VDPGVVQAAIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA*
Ga0187847_101522701	3300017948	Peatland	LGLVDPGVVQAAIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0187817_106265361	3300017955	Freshwater Sediment	QAAIAPVLVRELTTENSGPRRRIELVAGRSAMAEQVSQRNVASADVLFDTALGVVYQGEMFHIEGFVVERFAGIAYLYRVVAVA
Ga0187888_13706652	3300018008	Peatland	VVRELTTENNGPRRRIELLAGQAAMAEQVSQRNVASAQVLFETALGLVYRGEVFHIQGFIVERVGGVAYLYRVAAVS
Ga0187864_100599224	3300018022	Peatland	MAEQVSQRNVASAEVLFETALGLVYDGEVFHIQGFVVERLAGAAYLYRVAAMS
Ga0187889_100117296	3300018023	Peatland	AMAEQVSQRNVASAEVLFETALGLVYDGEVFHIQGFVVERLAGAAYLYRVAAMS
Ga0187869_105106812	3300018030	Peatland	EITTENSGPRRQIELLAGQAAMAEQVSQRNVAAAEVLFETALGLVYRGEVFHIQGFIVERAGGMAYLYRVAAVS
Ga0187863_105138242	3300018034	Peatland	RRIELVAGPASMAEQVSQRNVASADVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVAAMA
Ga0187883_101306221	3300018037	Peatland	QAVIAPVIVRELTTETNGPRRRIEMLAGHAAMAEQVSQRNVASAEVLFETALGLVYGGEMFHIQGFIVERLGGVAYLYRVAAMA
Ga0187855_102026751	3300018038	Peatland	AAGLAAGGMAELGLVDPGVEQAVIGPVVVRELTTEDSGPRRRIEILAGRAAMAEQVSQRNVASADVLFETALGLVYDREVFHIQGFVVERLAGVAYLYRVAAMS
Ga0187855_107209042	3300018038	Peatland	HAAMAEQVSQRNVASAEVLFETALGLVYDGEVFHIQGFVVERLAGAAYLYRVAAMS
Ga0187862_102607491	3300018040	Peatland	ADAVAELGLVDPGVEQALIAPVVVRELTTENNGPRRRIELLAGRAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0187862_103001701	3300018040	Peatland	IEMLAGHAAMAEQVSQRNVASAEVLFETALGLVYGGEMFHIQGFIVERLGGVAYLYRVAAMA
Ga0187890_107422981	3300018044	Peatland	IELVVGRSAMTAQVSQRSVESADVLFETALGVVYEGEMFHIEGFVVERFAGVAYLYRVLAVA
Ga0187851_106570962	3300018046	Peatland	ELTTENNGPRRRIELLVGRSAMVQQVSQRNVASADVLFETALGVVYRGEMFHIEGFIAERFDGVAYLYRVLAVA
Ga0187851_108352911	3300018046	Peatland	PVVVRELTTEDSGPRRRIEILAGRAAMAEQVSQRNVASADVLFETALGLVYDREVFHIQGFVVERLAGVAYLYRVAAMS
Ga0187859_102534421	3300018047	Peatland	VGPRRRIELLAGQAAMAEQVSQRNVASADVLFETALGLIYDGEVFHIQGFVVERLEGMAYLYRVAAMS
Ga0187858_100473274	3300018057	Peatland	GPRRRIELLAGWSAMAEQVSQRNVASAEVLFETALGLVYRGEVFHIEGFVVERLAGVAYLYRVAAMS
Ga0187769_107617181	3300018086	Tropical Peatland	NGPRRRIELLAGWSAMAEQVSQRNVASAEVLFETALGLVYGGEVFHIQGFVVERLEGVAYLYRVAAMA
Ga0187771_110663602	3300018088	Tropical Peatland	LGLIDPGVAQASIAPVIVRELTTESNGPRRRIELVAGRSSMAELVSQRNVASADVLFETALGLIYQGEMFHIEGFVMDQFAGVAYLYRVMAVA
Ga0187770_106012111	3300018090	Tropical Peatland	AGMPGDATGKLGLIDPGVAQASIAPVIVRELTTESNGPRRRIELVAGRSSMAELVSQRNVASADVLFETALGLIYQGEMFHIEGFVMDQFAGVAYLYRVMAVA
Ga0187770_112458522	3300018090	Tropical Peatland	VDPGVVQAAIAPVIVRELTTENNGPRRRIELVAGRSAMAELVSQRNVASADVLFETALGMVYQGDIFHIEGFVVDRFAGVAYLYRVVAVA
Ga0182031_10225511	3300019787	Bog	AGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0182031_11261821	3300019787	Bog	RAAASELGLVDPGVEQATIAPVVVRELTTENNGPRRRIELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0182031_15139816	3300019787	Bog	VDPGVEQATIAPVVVRELTTENNGPRRRIELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVWSGWGEWPICTGWRR
Ga0210407_111020501	3300020579	Soil	RELTTENSGPRRRIELLAGQAAMAESVSQRNAASADVLFETALGLVYGGEVFHIEGFVVERLGGVGYLYRVAAVS
Ga0210407_114872561	3300020579	Soil	LLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS
Ga0210399_108012661	3300020581	Soil	PVMVRELTTENSGPRRRIELLAGQAAMAESVSQRNVPSADVLFETALGLVYGGEVFHIEGFVVERLGGVGYLYRVAAVS
Ga0210390_103173823	3300021474	Soil	AGLPGDGVAELGLVDPGIVQAVIGPVVVRELTAETNGPRRRIEVVAGRSTMAELVSQRNVASAEILFETALGLVCRGEVFHIQGFIVERMAGVAYLYRIEAMS
Ga0224558_11238802	3300023090	Soil	PQRRIEMLAGQAAMAEQVSQRSVASAEVLFETALGLVYRGEVFHIQGFIVERVGGVAYLYRVAAVA
Ga0224558_11369892	3300023090	Soil	VAELGLVDPGVEQVLIAQVVVVELTTENNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEMFHIQGFVVERLGGVAYLYRVAAMS
Ga0224556_11526281	3300024295	Soil	VEQATIAPVVVRELTTENNGPRRRIELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0208820_11091001	3300025576	Peatland	TTENNGPRRRIEMLAGQAAMAEQVSQRSVASAEALFETALGLVYRGEVFHIQGFIVERVGGVAYLYRVAAVA
Ga0208488_10018444	3300027110	Forest Soil	PRRRIEVVAGRSTMAELVSQRNVASAEILFETALGLVCRGEVFHIQGFIVERMAGVAYLYRIEAMS
Ga0209655_101726552	3300027767	Bog Forest Soil	FQILAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERVGGVTYLYRVAAVS
Ga0209169_100732111	3300027879	Soil	RRIEVLAGRSTMAPLVSERNVASADVLFETALGIVYRGEMFHIEGFVVERFGGVAYLYRVLAVA
Ga0209275_108785531	3300027884	Soil	GPRRRIEVVAGRSTMAELVSQRNVASAEILFETALGLVCRGEVFHIQGFIVERMAGVAYLYRIEAMS
Ga0209067_101791273	3300027898	Watersheds	NGPRRRIELVAGRSAMAEQVSQRNVASAEVLFETALGVVYQGEMFHIEGFVVERFAGVAYLYRVLAVA
Ga0209067_109576041	3300027898	Watersheds	LGLVDPGVEQASISPVIVREVTTENNGPRRRIELLVGQAAMAEQVSQRNAASADVLLETALGLVYCGEVFHIEGFVVERLAGVAYLYRVAAVA
Ga0209006_108018011	3300027908	Forest Soil	NGPRRRIELLAGQEAMEEQVSQRNVASADVLFETALGLLYCGEMFHIQGFVVERIGGVAYLYRVAAVS
Ga0209698_113401671	3300027911	Watersheds	VIVRELTTENSGPRRRIELLAGCSALAEQLSQRGAASADVLFQTALGLVYDGEVFHIEGYVVERLEGMPYLYRVAAVA
Ga0302152_100462121	3300028572	Bog	LAGHAAMAEQVSQRNVACAEVLFETALGLLYGGVIFRIEGFVVERLDGVAYLYKVAAVA
Ga0302265_11162131	3300028859	Bog	HAAMAEQVSQRNVACAEVLFETALGLLYGGVIFRIEGFVVERLDGVAYLYKVAAVA
Ga0302154_103825632	3300028882	Bog	IELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0308309_101947281	3300028906	Soil	GVVQALIAPVVVREISTENSGPRRHIELLAGQAALAQQVSQRNVASADVLFETALGLVYCGEVFHIQGFMVERLGGVTYLYRVSAVS
Ga0247275_11222672	3300029817	Soil	QALIAPVIVRELTTETNGPRRRIEMMAGQAAMAEQVSQRNVASAEVLFQTALGLVYDGEVFHIQGFVVERLAGVAYLYRVAAMS
Ga0311332_100666571	3300029984	Fen	ADAVGGLGLIDPGVEQAPISPVIVRELTTESNGPRRRIELVAGRSALAEQVSQRNVASADVLFETALGIVYQGEMFCIEGFVVERFGGVAYLYRVLAVA
Ga0311338_105937031	3300030007	Palsa	GLPGDAVADLGLVDPGVVQAAIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0311344_103764634	3300030020	Bog	DAVADLGLVDPGVVQAVIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0302282_12409821	3300030045	Fen	DPGVEQATIAPVVVRELTTENNGPRRRIELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0302195_100990791	3300030051	Bog	LTTENNGPRRRIELLAGYSALAEQVSQRSVATADVLFETALGLVYRGEVFHIQGFVVERLGGVAYLYRVAAMS
Ga0311333_102901033	3300030114	Fen	IVRELTTESNGPRRRIELVAGRSALAEQVSQRNVASADVLFETALGIVYQGEMFCIEGFVVERFGGVAYLYRVLAVA
Ga0302194_104341831	3300030506	Bog	FAAAGLPGDAVADLGLVDPGVVQAAIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0302193_101083731	3300030519	Bog	IELLAGHAAMAEQVSQRNVACAEVLFETALGLLYGGVIFRIEGFVVERLDGVAYLYKVAAVA
Ga0170824_1080930751	3300031231	Forest Soil	PGDAISQLGLVDPGVEQVLITPVMVRELTTENSGPRRRIELLAGQAAMAESVSQRNVATAEVLFETALGLVYCGEVFHIEGFVVERMGGVSYLYRVAAVS
Ga0302324_1031178261	3300031236	Palsa	AGLPGDAVADLGLVDPGVVQAAIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0265329_101385222	3300031242	Rhizosphere	AAGMPADAVAALGLVDPGVEQAVISPVIVRELTTENDGPRRRIELLAGRSAMAEQVSERNVVSADVLFETALGVVYQGEIFHIEGFVAERMDGVAYLYRVSAVA
Ga0302318_102314923	3300031258	Bog	AVIGPVIVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAVA
Ga0302187_100595701	3300031259	Bog	IAPVFVRELTTETNGPRRRIELLAGHAAMAEQVSQRNVACAEVLFETALGLLYGGVIFRIEGFVVERLDGVAYLYKVAAVA
Ga0302320_108102421	3300031524	Bog	ELLAGHAAMAEQVSQRNVACADVLFETALGVLYRGVIFHIEGFVIERLDGVAYLYKVAAV
Ga0302326_111029841	3300031525	Palsa	IVQAVIGPVVVRELTTETNGPRRRIEVVAGRSTMAELMSQRNVASAEILFETALGLVYRGEVFHIQGFIVERMAGVAYLYRVEAMS
Ga0307476_100773374	3300031715	Hardwood Forest Soil	KEVGPRRQIELLASQAAMAEQVSQRNVASADVLFETALGLVYDGEVFHIQGCIVERLEGMAYLYRVAAMS
Ga0307474_105301263	3300031718	Hardwood Forest Soil	TPVMVRELTTENSGPRRRIELLAGHAAMAEPVSQRNVATAEVLFETALGLVYCGEVFHIEGFVVERMGGVSYLYRVAAVS
Ga0307469_102812843	3300031720	Hardwood Forest Soil	PADAVSALGLVDPGVVQAVISPVIVREFTAENNGPRRRIEVLAGCSSMAEQVSQKNVASAEVLWETALGLVYGGEVFHIQGFVVERLAGVPYLYRVAAMA
Ga0307475_103598963	3300031754	Hardwood Forest Soil	RELTAETNGPRRRIELLAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS
Ga0307478_104942291	3300031823	Hardwood Forest Soil	GQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS
Ga0307479_117222072	3300031962	Hardwood Forest Soil	LAGQAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIQGFVVERLAGVAYLYRVSAVS
Ga0335078_124885912	3300032805	Soil	APIAPVVVRELTTDSSGPRRRIEVLAGRTTMAEQVSQRNVASADVLFETALGIVYEGEIFHIEGFVAERFEGVAYLYRVVAVA
Ga0326728_100047381	3300033402	Peat Soil	GPRRRIELLAGWSAMAEQVSQRNVASAEVLFETALGLVYGGEMFHIQGFVVERLGGVAYLYRVAAMA
Ga0326728_107189711	3300033402	Peat Soil	DPGVEQVVIAPVVVVELTTETNGPRRRIELLAGHAAMAEQVSQRNVASAEVLFETALGLVYCGEVFHIEGFVVERLGGVTYLYRVAAVS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097850

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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