Metagenome / Metatranscriptome Family F097860

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097860
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	42 residues
Representative Sequence	MTGKESGHIDHEAAQAVPHAAANPDALEVAPGTAHEHLEGWI
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.423 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.423 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.00% β-sheet: 0.00% Coil/Unstructured: 90.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11946	DUF3463	85.58
PF11604	CusF_Ec	0.96
PF13276	HTH_21	0.96
PF02518	HATPase_c	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.88 %
Unclassified	root	N/A	47.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.88 %
Unclassified	root	N/A	47.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.88 %
Unclassified	root	N/A	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.77 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.50 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100250453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1659	Open in IMG/M
3300004152\|Ga0062386_100646710	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005434\|Ga0070709_11641742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005436\|Ga0070713_102375444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005542\|Ga0070732_10528068	Not Available	715	Open in IMG/M
3300005591\|Ga0070761_10873299	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005602\|Ga0070762_10375239	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005921\|Ga0070766_11191473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	527	Open in IMG/M
3300005952\|Ga0080026_10048779	Not Available	1105	Open in IMG/M
3300005994\|Ga0066789_10088562	Not Available	1334	Open in IMG/M
3300006174\|Ga0075014_100076249	Not Available	1509	Open in IMG/M
3300006176\|Ga0070765_101043480	Not Available	773	Open in IMG/M
3300009520\|Ga0116214_1454803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009523\|Ga0116221_1154154	Not Available	1000	Open in IMG/M
3300009524\|Ga0116225_1460063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300009624\|Ga0116105_1072693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300009638\|Ga0116113_1025885	Not Available	1308	Open in IMG/M
3300009824\|Ga0116219_10243342	Not Available	1023	Open in IMG/M
3300010343\|Ga0074044_10457251	Not Available	835	Open in IMG/M
3300010866\|Ga0126344_1271307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010877\|Ga0126356_10370696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300010877\|Ga0126356_10519093	Not Available	800	Open in IMG/M
3300012199\|Ga0137383_10286597	Not Available	1206	Open in IMG/M
3300012203\|Ga0137399_11803994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012210\|Ga0137378_11044017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300012362\|Ga0137361_10190550	Not Available	1851	Open in IMG/M
3300012925\|Ga0137419_10450182	Not Available	1014	Open in IMG/M
3300014156\|Ga0181518_10428791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300014156\|Ga0181518_10564358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300014501\|Ga0182024_10928389	Not Available	1046	Open in IMG/M
3300015264\|Ga0137403_10492261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300017933\|Ga0187801_10115211	Not Available	1028	Open in IMG/M
3300017973\|Ga0187780_10853881	Not Available	660	Open in IMG/M
3300017995\|Ga0187816_10357750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300018006\|Ga0187804_10598216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300018034\|Ga0187863_10486680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300018037\|Ga0187883_10547978	Not Available	598	Open in IMG/M
3300018086\|Ga0187769_10816623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300018090\|Ga0187770_10184639	Not Available	1602	Open in IMG/M
3300018090\|Ga0187770_10408109	Not Available	1068	Open in IMG/M
3300019786\|Ga0182025_1131962	Not Available	1145	Open in IMG/M
3300020582\|Ga0210395_10013082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6139	Open in IMG/M
3300021168\|Ga0210406_10644745	Not Available	822	Open in IMG/M
3300021178\|Ga0210408_10396812	Not Available	1099	Open in IMG/M
3300021181\|Ga0210388_10644948	Not Available	924	Open in IMG/M
3300021181\|Ga0210388_11504425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300021401\|Ga0210393_10956257	Not Available	694	Open in IMG/M
3300021406\|Ga0210386_10183798	Not Available	1763	Open in IMG/M
3300021433\|Ga0210391_11110575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021474\|Ga0210390_10265476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1454	Open in IMG/M
3300021474\|Ga0210390_10266685	Not Available	1450	Open in IMG/M
3300021475\|Ga0210392_10559939	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300021479\|Ga0210410_10097653	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300022509\|Ga0242649_1038069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300022532\|Ga0242655_10130659	Not Available	719	Open in IMG/M
3300022726\|Ga0242654_10287853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300022730\|Ga0224570_101325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1890	Open in IMG/M
3300025412\|Ga0208194_1000723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6887	Open in IMG/M
3300025482\|Ga0208715_1079918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300025579\|Ga0207927_1079919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	774	Open in IMG/M
3300025812\|Ga0208457_1034991	Not Available	1137	Open in IMG/M
3300027035\|Ga0207776_1019967	Not Available	904	Open in IMG/M
3300027370\|Ga0209010_1010996	Not Available	1660	Open in IMG/M
3300027829\|Ga0209773_10133812	Not Available	1030	Open in IMG/M
3300027842\|Ga0209580_10581254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300027842\|Ga0209580_10650345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027853\|Ga0209274_10732441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027855\|Ga0209693_10141415	Not Available	1189	Open in IMG/M
3300027862\|Ga0209701_10611269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300027884\|Ga0209275_10520572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300027889\|Ga0209380_10808361	Not Available	531	Open in IMG/M
3300027895\|Ga0209624_11127367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027908\|Ga0209006_11118673	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300027911\|Ga0209698_11139032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300028747\|Ga0302219_10054369	Not Available	1493	Open in IMG/M
3300028798\|Ga0302222_10067995	Not Available	1433	Open in IMG/M
3300028873\|Ga0302197_10034793	Not Available	3032	Open in IMG/M
3300028874\|Ga0302155_10067015	Not Available	1625	Open in IMG/M
3300028906\|Ga0308309_10434410	Not Available	1129	Open in IMG/M
3300029883\|Ga0311327_10723196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300029911\|Ga0311361_11292447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300029917\|Ga0311326_10365095	Not Available	721	Open in IMG/M
3300029997\|Ga0302302_1330425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300029999\|Ga0311339_10794251	Not Available	912	Open in IMG/M
3300030011\|Ga0302270_10217052	Not Available	1096	Open in IMG/M
3300030509\|Ga0302183_10202509	Not Available	775	Open in IMG/M
3300030580\|Ga0311355_11711296	Not Available	536	Open in IMG/M
3300030706\|Ga0310039_10137268	Not Available	997	Open in IMG/M
3300030760\|Ga0265762_1152468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031524\|Ga0302320_10023077	All Organisms → cellular organisms → Bacteria	12234	Open in IMG/M
3300031525\|Ga0302326_13131221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300031708\|Ga0310686_105944320	Not Available	554	Open in IMG/M
3300031708\|Ga0310686_105946608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031708\|Ga0310686_109965848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031708\|Ga0310686_115404406	Not Available	1369	Open in IMG/M
3300031715\|Ga0307476_10911613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031754\|Ga0307475_11190695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300031955\|Ga0316035_114548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031955\|Ga0316035_121127	Not Available	536	Open in IMG/M
3300031962\|Ga0307479_10504076	Not Available	1194	Open in IMG/M
3300031962\|Ga0307479_10902464	Not Available	856	Open in IMG/M
3300032160\|Ga0311301_11375600	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300032770\|Ga0335085_11430975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300032954\|Ga0335083_10019324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7910	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Aquatic	Environmental → Aquatic	14.42%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.15%
Peat	Environmental → Terrestrial → Peat	13.46%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Sediment	Environmental → Aquatic → Sediment	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.73%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031955	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002504531	3300002245	Forest Soil	MTGKEGGHIDHAAMGAAPPHANTMNPDALEVAPGTAHERLEGWIPEL
Ga0062386_1006467101	3300004152	Bog Forest Soil	MTGKEGGHIDHAAAGAVPPHANAMNPDALEVAPGTAHERLEGWIP
Ga0070709_116417421	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKEGGHIDHASPAATPPHAKTIKPDALEVAPGTAHERLE
Ga0070713_1023754442	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKEAGHLDHASAQATPHVNAMNPDALEVAPGTAHERLEGW
Ga0070732_105280681	3300005542	Surface Soil	MTGKEAGHVDHAAVGSTPPHANAMNPDALEVAPGTA
Ga0070761_108732992	3300005591	Soil	MTGKEGGHVDHAAAQATPHADAVNPDALEVAPGTAHERLEGWIPELASDE
Ga0070762_103752392	3300005602	Soil	MTGKESGHIDHEAAQAVPHANPETLEVAPGTAHEKLEGWI
Ga0070766_111914731	3300005921	Soil	MTGKEAGHLDHESAASTPHVNALNPEALEIAPGTAHEQLEGWIP
Ga0080026_100487792	3300005952	Permafrost Soil	MTGKEGGHIDHASAAATPPHANAVNPDALEVAPGTE
Ga0066789_100885621	3300005994	Soil	MTGKEGGHIDHASPAATPPHANAINPDALEVAPGTAHER
Ga0075014_1000762491	3300006174	Watersheds	MTGKEAGHIDHASPQATPPHANVNPDALEVAPGTEREQLEGWI
Ga0070765_1010434802	3300006176	Soil	MTGKESGHFDHEAAQAVPHTNPDALELAPGTVHEKLEG
Ga0116214_14548031	3300009520	Peatlands Soil	MTGKEAGHIDHASAEATPPHANAGNPDALEVAPGTIHEKLEGLNPQLAT
Ga0116221_11541542	3300009523	Peatlands Soil	MTGKEAGHIDHASPQATPPPAKTVNPDAPEIAPGTAREQLE
Ga0116225_14600632	3300009524	Peatlands Soil	MTGKEAGHVDHASPQATPPHANAANPDSLEVAPGAEREQLEGWIPTLTS
Ga0116105_10726931	3300009624	Peatland	MTGKEAGHIDHASPQATPPHANAPNPETLEVAAGTAHEQLEGW
Ga0116113_10258852	3300009638	Peatland	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHEQLEGWIP
Ga0116219_102433422	3300009824	Peatlands Soil	MTGKEAGHIDHASAEATPPHANAGNPDALEVAPGTIHEKLEGW
Ga0074044_104572512	3300010343	Bog Forest Soil	MTGKESGHIDHEAAKAVPHANPDTLEVAPGTAHEKLEGWIP
Ga0126344_12713071	3300010866	Boreal Forest Soil	MAGHFMTGKEGGHIDHASAEATPPHAHAMNPDALEVAPGTAHERLEGWIP
Ga0126356_103706961	3300010877	Boreal Forest Soil	MTGKEGGHIDHAVAGAVPPHANAMTPDALEVAPGTEHERLE
Ga0126356_105190932	3300010877	Boreal Forest Soil	MTGKEGGHIDHASAEATPPHANAMNPDALEVAPGSAHERLEGWIPELA
Ga0137383_102865971	3300012199	Vadose Zone Soil	MTGKAAGHIDHASAQATPPRAGALNPDALEVAPGTQHEQLEGWIPQ
Ga0137399_118039941	3300012203	Vadose Zone Soil	MTGKAAGHIDHASAQATPPHAGALNPDALEVAPGTQH
Ga0137378_110440172	3300012210	Vadose Zone Soil	MTGKEGGHIDHASADVPPHANAMNPDALEVAPGTAHE
Ga0137361_101905503	3300012362	Vadose Zone Soil	MTGKASGHIDHEAAQTVPHANPDTLEVAPGTAHEQLEGWIPQL
Ga0137419_104501821	3300012925	Vadose Zone Soil	MTGKEAGHIDHASPHAMPPHANASNAETLEVAPGTKHEQLEGWI
Ga0181518_104287911	3300014156	Bog	MTGKAAGHIDHSSPQATPPHASPNPDALEVAPGAAREQLEGWIPALAS
Ga0181518_105643581	3300014156	Bog	MTGKESGHIDHEAAQAVPHTAANPDALELAPGTVHEKLEGWIP
Ga0182024_109283891	3300014501	Permafrost	MTGKASGHIDHEAAQAVPHTANTDTLELAPGTAREHLEGWIPQLASDEE
Ga0137403_104922611	3300015264	Vadose Zone Soil	MTGKEGGHMDHAAAQAAPHANAVNADALEVAPGTEHERLEGWIPALA
Ga0187801_101152112	3300017933	Freshwater Sediment	MTGKESGHIDHSAAQAVPHANPDALEVAPGTAHENLEGW
Ga0187780_108538812	3300017973	Tropical Peatland	MTGKEAGHIDHASPSATPPHANALNPDALEVAPGTAREQLEGWIPSLATED
Ga0187816_103577501	3300017995	Freshwater Sediment	MTGKEAGHIDHATPNAIPPHANAANPDALEIAPGAAHEQLEGWIPTL
Ga0187804_105982163	3300018006	Freshwater Sediment	MTGKESGHIDHEAAQAVPHANPDALEVAPGTAHENL
Ga0187863_104866803	3300018034	Peatland	MTGKEAGHIDHASPQSTPPHANAPNPETLEVAAGTAH
Ga0187883_105479781	3300018037	Peatland	MTGKEGGHIDHALAGAIPPHADAVNPDALEIAPGTAHER
Ga0187769_108166233	3300018086	Tropical Peatland	MTGKEAGHIDHASPQATPPHANAANPDSLEIAPGAEREQLEGWIPALT
Ga0187770_101846391	3300018090	Tropical Peatland	MTGKEAGHLDHTSAAAAPHINAPNPDALEVAPGVEREQLEGWIPALAGEEDLRL
Ga0187770_104081091	3300018090	Tropical Peatland	MTGKEAGHLDHTSAAAAPHINAPNPDALEIAPGVEREQ
Ga0182025_11319621	3300019786	Permafrost	MTGKESGHIDHESAQAVPHADPDALELAPGTLHEKLEGWIPNS
Ga0210395_100130826	3300020582	Soil	MTGKESGHIDHEAAQAVPHANPETLEVAPGTAHEK
Ga0210406_106447452	3300021168	Soil	MTGKEGGHVDHAAAQATPHVDAVNPDTLEVAPGTAHERLEG
Ga0210408_103968121	3300021178	Soil	MTGKEGGHIDHASADATPPHANATNPDSLEVAPGTAHE
Ga0210388_106449481	3300021181	Soil	MTGKEAGHLDHESATAAPHAGAVNPENLEVAPGTA
Ga0210388_115044251	3300021181	Soil	MTGKESGHIDHEAAQAVPHINPDALEVAPGTAHEQLEGWI
Ga0210393_109562571	3300021401	Soil	MTGKESGHIDHEAAQAVPHANPDTLEVAPGTAHEKL
Ga0210386_101837983	3300021406	Soil	MTGKEGGHVDHAAAGAAPPHVNVMNPDTLEVAPGTAHERLEGWIPELASE
Ga0210391_111105752	3300021433	Soil	MTGKEGGHIDHAAAGAVPPHAGSVNPDSLEVAPGTAHERLEGW
Ga0210390_102654761	3300021474	Soil	MTGKESGHIDHEAAQAVPHVNPDTLEVAPGTAHEKLEGW
Ga0210390_102666851	3300021474	Soil	MTGKESGHIDHEAAQAVPHANPETLEVAPGTAHEKLEGWIPQLATE
Ga0210392_105599392	3300021475	Soil	MTGKESGHVDHEAAQAVPHVNPDALEVAPGTTHEHLEGWI
Ga0210410_100976531	3300021479	Soil	MTGKAAGHIDHASAQATPPHAGALNPDALEVAPGTQHEQLEGWIPQLA
Ga0242649_10380691	3300022509	Soil	MTGKEGGHLDHAAAQAAPHVDAVNPDALEVAPGTAHER
Ga0242655_101306591	3300022532	Soil	MTGKESGHVDHEAAQAVPHVNPDALEVAPGTTHEHLEG
Ga0242654_102878532	3300022726	Soil	MTGKESGHFDHEAAQAVPHTNPDALELAPGTVHEKLE
Ga0224570_1013251	3300022730	Rhizosphere	MTGKEAGHIDHASPQATPPHANAPNPETLEVAAGTAHEQLEGWIPQLA
Ga0208194_10007237	3300025412	Peatland	MTGKESGHIDHEAAQAVPHAHPDALEVAPGTAHENLEGWIPQ
Ga0208715_10799182	3300025482	Arctic Peat Soil	MTGKEGGHIDHASPAATPPHANAINPDALEVAPGTAHERLEGWI
Ga0207927_10799192	3300025579	Arctic Peat Soil	MTGKEGGHIDHASAEAIPPHANVMNPDALEVAPGTAHER
Ga0208457_10349911	3300025812	Peatland	MTGKESGHIDHEAAQAVPHAAANPDALEVAPGTAHEHLEGWI
Ga0207776_10199672	3300027035	Tropical Forest Soil	MTGKEGGHIDHASVQGVPPHVDGVNPDALEVAPGVAREQLEGWIPGLATE
Ga0209010_10109962	3300027370	Forest Soil	MTGKEGGHVDHASVGATPPHADVVNPDALEVAPGTAHERLEGWIPELA
Ga0209773_101338121	3300027829	Bog Forest Soil	MTGKESGHIDHEAAQAVPHANPDALELAPGTIHEKLEGWIPQLA
Ga0209580_105812542	3300027842	Surface Soil	MTGKEAGHFDHAAAQAAPHANVENPDTLEVAPGTEHERLE
Ga0209580_106503452	3300027842	Surface Soil	MTGKESGHIDHASADAPPHANAMNPDALEVAPGAAHERLEGWIPEL
Ga0209274_107324411	3300027853	Soil	MTGKEGGHVDHAAAQATPHADAVNPDALEVAPGTAHERLEGWIPELASD
Ga0209693_101414152	3300027855	Soil	MTGKESGHIDHEAAQAVPHVNPDTLEVAPGTAHEKLE
Ga0209701_106112692	3300027862	Vadose Zone Soil	MTGKEAGHVDHASPHAMPPHANAPNAETLEVAPGTKHEQLEGW
Ga0209275_105205721	3300027884	Soil	MTGKESGHIDHEAAQAVPHVNPETLEVAPGTAHEKLEGWIP
Ga0209380_108083613	3300027889	Soil	MTGKEGGHVDHTAGQAAPHVDVNPDALEVAPGTTHERLEG
Ga0209624_111273671	3300027895	Forest Soil	MTGKESGHFDHEAAQAVPHTNPDALELAPGTVHEKLEGWIPQLA
Ga0209006_111186731	3300027908	Forest Soil	MTGKEAGHLDHTGAGAAPHVGTDPATVNPDALEVAPGTAHERLEGWIPELATE
Ga0209698_111390322	3300027911	Watersheds	MTGKEAGHIDHASPQATPPHANVNPDALEVAPGTEREQLEGWIPQ
Ga0302219_100543692	3300028747	Palsa	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHEQLEGWIPQLAS
Ga0302222_100679951	3300028798	Palsa	MTGKESGHIDHEAAQAVPHADPDALEVAPGTAHEQLEG
Ga0302197_100347931	3300028873	Bog	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHENLEGWIPPL
Ga0302155_100670152	3300028874	Bog	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHEQ
Ga0308309_104344102	3300028906	Soil	MTGKEAGHIDHASPQATPPHANTPNPETLEVAAGTAHEQLEGW
Ga0311327_107231961	3300029883	Bog	MTGKESGHIDHEAAQAVPHAHPDVLEVAPGTSHENLEGWI
Ga0311361_112924471	3300029911	Bog	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHENLEGW
Ga0311326_103650951	3300029917	Bog	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHEQLEGWIPQ
Ga0302302_13304251	3300029997	Palsa	MTGKESGHIDHESAQAVPHANPDALELAPGTAHEHLEGWIPQLA
Ga0311339_107942512	3300029999	Palsa	MTGKESGHIDHEAAQAVPHANPDTLEVSPGTVHEKLEG
Ga0302270_102170521	3300030011	Bog	MTGKESGHIDHSAAQAVPHVNPDALEVAPGTAHENLEG
Ga0302183_102025092	3300030509	Palsa	MTGKESGHIDHEAAQAVPHANPDALEVAPGTAHENLEGWIPQ
Ga0311355_117112961	3300030580	Palsa	MTGKEAGHIDHASPQSTPPHANTPNPETLEVAAGTAHEQLEGWIPQLA
Ga0310039_101372681	3300030706	Peatlands Soil	MTGKEAGHIDHASAEATPPHANAGNPDALEVAPGTIHEKLEGWIPQLATD
Ga0265762_11524681	3300030760	Soil	MDTMTGKESGHLDHEAAQAVPHAAANPDALELAPGTVHEKLEGWIPQ
Ga0302320_100230771	3300031524	Bog	VFKILTLIFDEKMTGKESGHIDHESAQAVPHADPDSLELAPGAVHEKLEGWIPQL
Ga0302326_131312211	3300031525	Palsa	MTGKESGHIDHEAAQAVPHANPDTLEIAPGTAHEKL
Ga0310686_1059443201	3300031708	Soil	MTGKEAGHIDHASPQSTPPHADAPNPETLEVAAGTAHEQLEGW
Ga0310686_1059466082	3300031708	Soil	MTGKESGHIDHEAAQAVPHINPDALEVAPGTAHENLEGW
Ga0310686_1099658482	3300031708	Soil	MTGKESGHIDHEAAQAVPHINPDALEVAPGTAHENL
Ga0310686_1154044062	3300031708	Soil	MTGKESGHVDHEAAQAVPHVATNPDALEVAPGTAHENLEGWIPQLA
Ga0307476_109116131	3300031715	Hardwood Forest Soil	MTGKESGHFDHEAAQAVPHTNPDALELAPGTVHEKLEGWIP
Ga0307475_111906951	3300031754	Hardwood Forest Soil	MTGKEGGHIDHASVGFTPPHANAMNPDALEVAPGTAHERLEGWIP
Ga0316035_1145481	3300031955	Soil	MTGKESGHIDHESAQAVPHINPDTLEVAPGTAHEQLEGWIP
Ga0316035_1211272	3300031955	Soil	MTGKESGHIDHEAAQAVPHANPDALELAPGTAHENLEGW
Ga0307479_105040761	3300031962	Hardwood Forest Soil	MTGKEAGHIDHASPDATPPHANVPNPDSLELAPGTAHEQLEGWIPQL
Ga0307479_109024641	3300031962	Hardwood Forest Soil	MTGKEGGHIDHASVGATPPHANAMNPDTLEVAPGTAHERLEG
Ga0311301_113756001	3300032160	Peatlands Soil	MTGKESGHIDHEAAQAVPHAAANPDALEVAPGTAHEHLEGWIPQLAS
Ga0335085_114309752	3300032770	Soil	MTGKEGGHIDHASAEAIPPHANVVNPDALEVAPGTAHERLEGW
Ga0335083_100193241	3300032954	Soil	MTGKEAGHLDHAAAQSAPHVNPDALEVAPGTEHEKLEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097860

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences