Metagenome / Metatranscriptome Family F097878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	81 residues
Representative Sequence	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.73 %
% of genes near scaffold ends (potentially truncated)	93.27 %
% of genes from short scaffolds (< 2000 bps)	97.12 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.346 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.68% β-sheet: 29.87% Coil/Unstructured: 45.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08281	Sigma70_r4_2	3.85
PF07813	LTXXQ	2.88
PF03401	TctC	1.92
PF12728	HTH_17	1.92
PF09339	HTH_IclR	0.96
PF03601	Cons_hypoth698	0.96
PF07007	LprI	0.96
PF01418	HTH_6	0.96
PF07045	DUF1330	0.96
PF04191	PEMT	0.96
PF00474	SSF	0.96
PF02796	HTH_7	0.96
PF05598	DUF772	0.96
PF11799	IMS_C	0.96
PF12048	DUF3530	0.96
PF06689	zf-C4_ClpX	0.96
PF14020	DUF4236	0.96
PF00817	IMS	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	11.54
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.92
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.96
COG1737	DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains	Transcription [K]	0.96
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.96
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.96
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.96

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.42 %
Unclassified	root	N/A	8.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.54 %
Unclassified	root	N/A	8.65 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	73.08 %
Unclassified	root	N/A	8.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.77 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	8.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	8.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.96 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	8.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.88 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.96 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	8.65 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.92 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	0.96 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.96 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	8.65 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.92 %
Ensifer sp. IC3342	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	0.96 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.96 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1033747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10074636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300000956\|JGI10216J12902_112778270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300005148\|Ga0066819_1028232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300005172\|Ga0066683_10275036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300005177\|Ga0066690_10495658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300005332\|Ga0066388_100841575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300005332\|Ga0066388_101298707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300005332\|Ga0066388_103258930	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005332\|Ga0066388_106854563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300005446\|Ga0066686_11007884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	540	Open in IMG/M
3300005552\|Ga0066701_10233023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1137	Open in IMG/M
3300005554\|Ga0066661_10279406	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300005554\|Ga0066661_10523875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300005557\|Ga0066704_10595794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300005586\|Ga0066691_10877539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300005764\|Ga0066903_101564288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300005764\|Ga0066903_103244629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300005764\|Ga0066903_106754584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300006173\|Ga0070716_101397502	Not Available	569	Open in IMG/M
3300006177\|Ga0075362_10149391	Not Available	1120	Open in IMG/M
3300006604\|Ga0074060_11039452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300006846\|Ga0075430_100297545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1335	Open in IMG/M
3300006854\|Ga0075425_100095254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3379	Open in IMG/M
3300006854\|Ga0075425_103036993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300006904\|Ga0075424_102041549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300007076\|Ga0075435_101877667	Not Available	526	Open in IMG/M
3300009137\|Ga0066709_100813312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1355	Open in IMG/M
3300009792\|Ga0126374_10319596	Not Available	1050	Open in IMG/M
3300009792\|Ga0126374_11144958	Not Available	620	Open in IMG/M
3300009792\|Ga0126374_11651440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300010046\|Ga0126384_10351842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1228	Open in IMG/M
3300010047\|Ga0126382_10694861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300010358\|Ga0126370_10106818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1950	Open in IMG/M
3300010360\|Ga0126372_10875087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300010360\|Ga0126372_12352644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300010376\|Ga0126381_103773306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300010398\|Ga0126383_12383996	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	614	Open in IMG/M
3300012199\|Ga0137383_10795626	Not Available	690	Open in IMG/M
3300012199\|Ga0137383_11106829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300012201\|Ga0137365_10639231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300012205\|Ga0137362_10158950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1935	Open in IMG/M
3300012211\|Ga0137377_11098258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300012211\|Ga0137377_11487155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300012353\|Ga0137367_11070728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300012356\|Ga0137371_10252329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1377	Open in IMG/M
3300012948\|Ga0126375_10723783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300012948\|Ga0126375_11284136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300012971\|Ga0126369_10583731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	1186	Open in IMG/M
3300012975\|Ga0134110_10240058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300015374\|Ga0132255_101267052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1111	Open in IMG/M
3300016270\|Ga0182036_10156309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1630	Open in IMG/M
3300016294\|Ga0182041_10941933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300016341\|Ga0182035_10542542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300016357\|Ga0182032_11603561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300016371\|Ga0182034_10593985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300016387\|Ga0182040_10126392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1783	Open in IMG/M
3300016404\|Ga0182037_10419119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1107	Open in IMG/M
3300016422\|Ga0182039_10649025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300016445\|Ga0182038_10108912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2031	Open in IMG/M
3300018468\|Ga0066662_11222839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300018468\|Ga0066662_11552372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300018468\|Ga0066662_11975865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300021168\|Ga0210406_10196408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1675	Open in IMG/M
3300021178\|Ga0210408_11497295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300024288\|Ga0179589_10568528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300025910\|Ga0207684_10131965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2144	Open in IMG/M
3300026354\|Ga0257180_1070523	Not Available	510	Open in IMG/M
3300026547\|Ga0209156_10256245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300027310\|Ga0207983_1025792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300027502\|Ga0209622_1014846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300027903\|Ga0209488_11162490	Not Available	522	Open in IMG/M
3300031545\|Ga0318541_10085625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1673	Open in IMG/M
3300031545\|Ga0318541_10183266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300031564\|Ga0318573_10776124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031572\|Ga0318515_10601559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031573\|Ga0310915_11079771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031682\|Ga0318560_10641019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300031723\|Ga0318493_10774466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300031724\|Ga0318500_10141313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1127	Open in IMG/M
3300031751\|Ga0318494_10332245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300031763\|Ga0318537_10046248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300031768\|Ga0318509_10379748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300031769\|Ga0318526_10257459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300031770\|Ga0318521_10785545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031780\|Ga0318508_1238967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031796\|Ga0318576_10582518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031879\|Ga0306919_10770371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300031910\|Ga0306923_11336183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300031941\|Ga0310912_10582705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300031941\|Ga0310912_11208432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300031954\|Ga0306926_12933499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031981\|Ga0318531_10246803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300032001\|Ga0306922_10277189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1802	Open in IMG/M
3300032042\|Ga0318545_10264681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300032059\|Ga0318533_10147248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1664	Open in IMG/M
3300032059\|Ga0318533_10528768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300032059\|Ga0318533_11073238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300032063\|Ga0318504_10657514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300032068\|Ga0318553_10233714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300032076\|Ga0306924_10606060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1238	Open in IMG/M
3300032180\|Ga0307471_101899639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300032261\|Ga0306920_101400630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1002	Open in IMG/M
3300033290\|Ga0318519_11007431	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.27%
Plants	Host-Associated → Plants	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.65%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10337471	3300000655	Forest Soil	IRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR*
AF_2010_repII_A001DRAFT_100746361	3300000793	Forest Soil	GLNEDQRNETFTYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
JGI10216J12902_1127782701	3300000956	Soil	KGTALGLDDWEALCSDRHSYSITIPPHLNAGIELISCRDLLNTSKMLLHRAGSKSKATGCLIR*
Ga0066819_10282321	3300005148	Soil	LGLNEDQRNETFTYLLRDGNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATNKMLSHRAGSKSKAKGCRIK*
Ga0066683_102750361	3300005172	Soil	ETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERRR*
Ga0066690_104956581	3300005177	Soil	EIFTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGPNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0066388_1008415753	3300005332	Tropical Forest Soil	RTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR*
Ga0066388_1012987071	3300005332	Tropical Forest Soil	GSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0066388_1032589303	3300005332	Tropical Forest Soil	QESNEKCDRVIRTLFDGTAQGSDNWEVLCQDRNSYSLRIRPEVNADIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0066388_1068545631	3300005332	Tropical Forest Soil	KCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLESAGSKSKATGCRIKRAERLHRR*
Ga0066686_110078841	3300005446	Soil	KCDLVIRTLFNGASVELDVWEALCRDGNSYSVSIPPEPNAAIELLSCRELLATSKMLLEGAGSKSKATGCRIKRAERRR*
Ga0066701_102330233	3300005552	Soil	GEQCDRVIRTLFKGTELGLDEWEALCHDRNSYSFIIPPELTAGIELVSCRELLVTRKMLLHRAGSKSKARGCTIK*
Ga0066661_102794064	3300005554	Soil	LELKLNEDQRDETFTYLLRDSNAKCNRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPQQTAGIELISCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR*
Ga0066661_105238752	3300005554	Soil	FTDLLRDGNVRCDRVIRTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0066704_105957941	3300005557	Soil	FTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLEEAGSKTKATGCRIQRAERLHPR*
Ga0066691_108775392	3300005586	Soil	LFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGNKSKATGCRIKRAERLHRR*
Ga0066903_1015642881	3300005764	Tropical Forest Soil	FTYLLQDSNAKCDRVVRTLFNGSTVELDDWEVLCRDRNSYSLTITPQKTAGIELVSCGELLATSKMLLERAASKSKATGCRIKRAERLHRR*
Ga0066903_1032446291	3300005764	Tropical Forest Soil	ELDDWEVLCRDRNSYSLTITPEQIAGIELVSCRELLATSKMLLEGAGSKSKAMGCRIKRAERLHRR*
Ga0066903_1067545841	3300005764	Tropical Forest Soil	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKTLLERAGSKSKATGCSIKRAERLHRR*
Ga0070716_1013975022	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IRTLFDGTAQGLDNWEVLCQDRNSYSLRIPPEVNTDIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0075362_101493911	3300006177	Populus Endosphere	MLLALSEDERNGAFTHLLRERNEKCDRVIRTLFGGTALGLDDWEVLCRDRNSYSLTITPELNASIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0074060_110394521	3300006604	Soil	RDSNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0075430_1002975451	3300006846	Populus Rhizosphere	WVIRTLFNGTALGLDNWEVLCRERNSYSLNIPPEVDADVELVSCRELIATSKRLLGRAGRKSKATGCRIK*
Ga0075425_1000952546	3300006854	Populus Rhizosphere	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0075425_1030369932	3300006854	Populus Rhizosphere	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSLRAGSKSKAKGCTIK*
Ga0075424_1020415492	3300006904	Populus Rhizosphere	LALSEDDRNAALTYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNVELVSCRELIATSKRLLERTDRKSKATGCRIK*
Ga0075435_1018776671	3300007076	Populus Rhizosphere	WEVLCSDRNSYSLSIPPELTAGIELVSCRELLATSKLLLHRAGSKTKARGCKIK*
Ga0066709_1008133121	3300009137	Grasslands Soil	IRTLFNGTTSELDVWEALCQDRNSYSLTIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0126374_103195961	3300009792	Tropical Forest Soil	FNGTALGLDNWEVLCRDRNSYSLSIPPGVNADIELVSCRELIATSKRLLGRSDRKGNAKGCRIK*
Ga0126374_111449583	3300009792	Tropical Forest Soil	STVELDDWEVLCRDRNSYSLTITPQKTAGIELVSCGELLATSKMLLERAASKSKATGCRIKRAERLHRR*
Ga0126374_116514401	3300009792	Tropical Forest Soil	RVIRTLFNGASVELDVWEALCRDGNSYSVIIPPEPNAAIELSSCRELLATSKMLLEGAGSKSKAIGCRITAVERPVERRNHRRHRGT*
Ga0126384_103518421	3300010046	Tropical Forest Soil	RTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLTTSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0126382_106948613	3300010047	Tropical Forest Soil	LGLNEDQRNETFTYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126370_101068183	3300010358	Tropical Forest Soil	LRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSVELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126372_108750873	3300010360	Tropical Forest Soil	VELDDWEVLCRDRNSYSLTITPEQTPSVELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126372_123526441	3300010360	Tropical Forest Soil	LDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELRATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0126381_1037733061	3300010376	Tropical Forest Soil	LLALSEDDRNAAFTHVLQVSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLGRAGRKSKATGCRIK*
Ga0126383_123839961	3300010398	Tropical Forest Soil	KCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLESTGSKSKATGCRIKRAERLHRR*
Ga0137383_107956261	3300012199	Vadose Zone Soil	NEKCDRIIRTLFNGTALGLDNWEALCPDQNTYSLSMPPEANADTALVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0137383_111068291	3300012199	Vadose Zone Soil	TLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0137365_106392311	3300012201	Vadose Zone Soil	MAYRVIRTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRRLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0137362_101589503	3300012205	Vadose Zone Soil	LELKLNEDQRDETFTYLLRDSNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0137377_110982581	3300012211	Vadose Zone Soil	LGLNEDQRNETFTYLLQDSNAKCDRVIRTLFIGSPVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0137377_114871552	3300012211	Vadose Zone Soil	RVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCKIK*
Ga0137367_110707281	3300012353	Vadose Zone Soil	LLALSEVERNAAFTHLLQGSNEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPEVNADIELVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0137371_102523291	3300012356	Vadose Zone Soil	RTLFNGTALGLDNWEVLCRDRNSYSLSIPPEVNADIELVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0126375_107237831	3300012948	Tropical Forest Soil	NGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE*
Ga0126375_112841362	3300012948	Tropical Forest Soil	QGSSEKCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPAVNTNIELVSCRELIATSKRLLGRSDRKGNAKGCRIK*
Ga0126369_105837312	3300012971	Tropical Forest Soil	HVIRTVFNGATSELDVWEALCRDGNSYSLTIPPEPNAGIELLSCRELLATSKMLLERAGSKSKLTGCRINDTC*
Ga0134110_102400581	3300012975	Grasslands Soil	LGLSEGERKEIFTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQ
Ga0132255_1012670521	3300015374	Arabidopsis Rhizosphere	DRNAALTYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNVELVSCRELIATSKRLLERADRKSKVTGCRIK*
Ga0182036_101563093	3300016270	Soil	EALLGLNEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182041_109419331	3300016294	Soil	NEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182035_105425423	3300016341	Soil	NAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182032_116035611	3300016357	Soil	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0182034_105939853	3300016371	Soil	LGLDEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182040_101263923	3300016387	Soil	GLNEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182037_104191192	3300016404	Soil	LRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182039_106490252	3300016422	Soil	FNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE
Ga0182038_101089121	3300016445	Soil	RDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0066662_112228391	3300018468	Grasslands Soil	EDERNAALTRLLHKSNEECDRVIRTLFNGTTLGLDDWEVLCSDGNSYSLSIPPELTAGVELVSCRELLATSKLLLHRAGSKTKAKGCKIK
Ga0066662_115523722	3300018468	Grasslands Soil	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQIPSIELVSCRELLATSKMLLERAGSKSKAMGCRIERAERLHRR
Ga0066662_119758651	3300018468	Grasslands Soil	CDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELISCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0210406_101964084	3300021168	Soil	IRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQSAGIELISCRELLATSKMLLEGAGSKSKAKGCRIKRAERLLRR
Ga0210408_114972951	3300021178	Soil	IRTFFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0179589_105685282	3300024288	Vadose Zone Soil	AGNCAKLGQRGTIGAQDQRNETFTYLLQDSNAKCDRVIRTLFNGSTVELDDWKVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0207684_101319653	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0257180_10705231	3300026354	Soil	TALGLDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLERADRKSKATGCRI
Ga0209156_102562451	3300026547	Soil	RTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR
Ga0207983_10257921	3300027310	Soil	LFGLSEDQRNETFTRLLQDNSAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTVHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0209622_10148462	3300027502	Forest Soil	MFTYLLRDSDAKCDRVIRTLFNGSTVELDAWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0209488_111624901	3300027903	Vadose Zone Soil	CDRVIRTLFNGTTLGLDDWEVLCSDRNSYSISIPPELTAGIELVSCRELLATSKLLLHRAGSKTKAKGCKIK
Ga0318541_100856251	3300031545	Soil	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQAAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0318541_101832664	3300031545	Soil	KCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLERADRKSKATGCRIK
Ga0318573_107761241	3300031564	Soil	RTLLGLDEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQSAGIELVSCRELLATSKTLLERAGSKSKATGCSIKPAERLHRR
Ga0318515_106015591	3300031572	Soil	FIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0310915_110797711	3300031573	Soil	TYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLNIPPGVNADIELVSCRELIATSKRLLGRSDRKGTATGCRIK
Ga0318560_106410192	3300031682	Soil	STVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318493_107744662	3300031723	Soil	FNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318500_101413131	3300031724	Soil	FNGSTVELDEWEVLCRDKNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0318494_103322453	3300031751	Soil	IRTLFNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318537_100462485	3300031763	Soil	LAHVIRTLLVGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318509_103797482	3300031768	Soil	EAFTYLLQDSNAKCDRVIRTLFIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0318526_102574593	3300031769	Soil	CLAHVIRTLFNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318521_107855451	3300031770	Soil	LAHVIRTVFNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE
Ga0318508_12389671	3300031780	Soil	DQRNETFTRLLRDNSAQCDRVIRTLFNGASVELDVWEALCRDGNSYSVSIPPEPNAAIELSSCRELLATSKMLLEGARSKS
Ga0318576_105825181	3300031796	Soil	EALLGLNEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0306919_107703711	3300031879	Soil	FNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0306923_113361831	3300031910	Soil	KCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0310912_105827052	3300031941	Soil	TFTYILRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKILLERAGSKSKATGCRIERAERLHGR
Ga0310912_112084321	3300031941	Soil	HVIRTVFNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVRCRELLATSKMLLERTGSKSKPTGCRINE
Ga0306926_129334992	3300031954	Soil	SDAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTARIEWVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0318531_102468032	3300031981	Soil	LGLNEDQRNEAFTYLLQDSNAKCDRVIRTLFIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0306922_102771892	3300032001	Soil	DRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNADIELVNCRELIATSKRLLGRSDRKGNATGCRIK
Ga0318545_102646812	3300032042	Soil	LFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318533_101472481	3300032059	Soil	RTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318533_105287682	3300032059	Soil	TYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0318533_110732381	3300032059	Soil	TYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIQRAERLHRR
Ga0318504_106575141	3300032063	Soil	NAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0318553_102337142	3300032068	Soil	EVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0306924_106060601	3300032076	Soil	RNVTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0307471_1018996391	3300032180	Hardwood Forest Soil	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCTIK
Ga0306920_1014006301	3300032261	Soil	SSKKCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPGVNADIELVNCRELIATSKRLLGRSDRKGNATGCRIK
Ga0318519_110074311	3300033290	Soil	LFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097878

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences